CmaCh11G003820 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGACTGAGTTTTTGAGTGGGCAAAAATCAAGGCACCCTCTCAAAATTAAAGCTAAGGTAAAGCAAAATTCCCACTCCCAATTTTCTCTGCAACTCCTTAAAGCTTCTTCTTCTTTCTTCAAAATCTTCGCCCTCAAGATCTCCCTCTCTTCCTTTTTCCAATCACAACAATGCCTATCAATACCGAATCTACGCCGCCTCCCTTGATCGGAAAAATTGGCCCTTACACCGTGTTCATGACCCCGCCGTCCACTCCTTCGCCCGCCTCTCCGCCGCAGCCGGTTTTCGAGTCCCCTAAGAAGGTCATTCAGCCGCCTCCTGTTCAGCCTCCGCCTCAGCAGTTCGATAAGTCTGTTTCTGTTGATACTGTGGCTAATGGGAATGCCTCCGTCGCTGGATTCTTTCGAAATGCGGTCTCGAAAGTGCAGAATGGTAATTCTTATTATTTGAAGTTAATGTTGCGATATTGAAGGTCCAGGAGACGGAATTTAGAGTATGATTTTTATGTTTTTGCTTGTGGAGGTACACAAGAACTCCTCTAGGGAAATTGATGAGTTCTTGAATGATGGAGTTTCGTGATTTCAGCAGTGTTTTAGCCCTATTGCTTGATGTGTTGCCATTGTTCCTTGTCTTTTTTGTTGTTGCCATTATTGGTAACAAGGGGAGACATGTTTATGAATCTTAGTATTCTCACTGTCTTGTCTTGTGAATTTCTTCTCTAATATAATGTTCTTCTGTATTTGCTTCTTCAAAGTTGGTTTTCTTTAAAATTTAACGACGGCAAATATTGTCTTGTCCTCTTTCGACTTTCCCTTCCAAGCTTTCCTTCGAGGTTTTTAAACGCGTATATTAAGAAGAGGTTTCTACACCCTCATAAGAAATGCTTTGGGACTTTCCCTTTCAAGCTTATTGTCTTCTTTGAGCTTTCTTTTCCAGGTTTCCCCTCAAAGTTCTAAAACATGTCTGCTAGGGAGAGGTCTACACCCTTATAAGAAATATTTTGTTCCCCTCACTGACCGATGTTAGACCTCACAATTCTGCTGGAGAGAGATTTCTACACCCTTATAAAAAATGCTTCGTTCCTCTCTCCAACCGATATGGGATCTCACAATCCACCCTCTTGGGGGCCAGAGTCCTCGCTAGCACACCTTTCGGTGTCTGGCTCTGATAACATTTGTAATAGTCCGAGGCTACTCCGTCTCTATTAGGGAGTCTTATAAGGAATGCTCTATTCCCCTCTTCAACCGATGTGGGGTCTCACAATCTCTTTTGTATGCTCTCCACATGAATATGTGCAAAATGTTTACTCATTTGTTAGTGAGAATTGTGTTCTTGGTTGGGACATTGAGGGAAAGAACAGAACAAAAAGAATAAAATTAGTGGCAAACCTTTGCTTCAGAGCTTAAATATTTCTTCCATGCATCTTTTTTTTTTCTGTAAACAATCAAAACATAAAGTTTTTGGTGCAATTTTGCAGCACATTCAAGCTTGGATGACCATTTGGCTCGCTGGTTCGGGTTAAATCAATCCAAGTACCAGTGGGCGCTAGATGACTATTACGAGAGCAAGGGAATGGTATGCATCTGCTCAAATTCATTAGTCCTTCAAGTACATATTCTTGTGTGTTCTTTTCTGAAATTTAGTGTTATTTCCCCAAATGTTAACAATGATTGTTCATTTCACTTATCTTTGCTCATCCATAGTCTATTATTTTGGCCTTTTCATAATTGAAACAACCACAATAATTTATTGAAACTGCATACACGAAGTAACTTTGAAGCGAACTTTCACTACTATTTCATGACGTAACTTTGAAGTCAAGTGTCTCTGTAACCGCCCAAGTTCACCATTAGCAGATATGGTTCTATTTGGACTTTCCTTTCTGAGGTTTCCCTCAAAGTTTTTAAAACGCATCTAGTAGGGAGAGGTTTCTACACCCTTATAAAGAATGTTTCGTTCTCCTCTTCAACCAATGTGAAATCTAATAGTCTCCCTAACTTGTTCACTTTTTATCATTGAGTACATTTATTTTCATCGAATACATAGGGTTAACTTGTGGAACCTATCTGTTGAGAAAGAAAAGTAGGGTGAAGAGGCTAACTGTGCTGCGGACGTGTGATCGAAGTTAGCACTTATGCTTCTATAGAGTAAAGGGAAACAATAATATATACATTTCTTGCTTGCCTTTGCTGAATTCTATGATTTAGTGCTTGAACATGCTTGGAGAGGGGAACGAAGTATTCTTTATAAGAGTGTGGAAACCTCTCCCTAGCAAATACGTTTTAAAACTGAGGGGAAGTCCAGAACGAAAAACCCAAAAAGGACAAAATTTGTTAGTGGTGGGCGTGGGCTGTTACAAATGATATTAGAGCTAGATACCAAGCGGTGTGTTAGTGAGAATATTGGGCTTCCAATGGGGGTGGATTGTGAGATCCCACGTTAGTTGGAGAGGGGAATGAAGCATTCTTTAAAAAGATGTGGAAACCTCTCCCTAGCAGACACGTTTTAAAACTAAGCCCAAATGAAATGTGGTTGTACATTTAATTCTATATTGAATTCAACTATGTGTATATGAGATGTTGAATCATAGCATTCTTCTGTTACTGCAGGAAAATGGGGACATGAAAGCGAAGGAACCGTCGAGCAAAGCCCAGAGCGTGTAA AGACTGAGTTTTTGAGTGGGCAAAAATCAAGGCACCCTCTCAAAATTAAAGCTAAGGTAAAGCAAAATTCCCACTCCCAATTTTCTCTGCAACTCCTTAAAGCTTCTTCTTCTTTCTTCAAAATCTTCGCCCTCAAGATCTCCCTCTCTTCCTTTTTCCAATCACAACAATGCCTATCAATACCGAATCTACGCCGCCTCCCTTGATCGGAAAAATTGGCCCTTACACCGTGTTCATGACCCCGCCGTCCACTCCTTCGCCCGCCTCTCCGCCGCAGCCGGTTTTCGAGTCCCCTAAGAAGGTCATTCAGCCGCCTCCTGTTCAGCCTCCGCCTCAGCAGTTCGATAAGTCTGTTTCTGTTGATACTGTGGCTAATGGGAATGCCTCCGTCGCTGGATTCTTTCGAAATGCGGTCTCGAAAGTGCAGAATGCACATTCAAGCTTGGATGACCATTTGGCTCGCTGGTTCGGGTTAAATCAATCCAAGTACCAGTGGGCGCTAGATGACTATTACGAGAGCAAGGGAATGGAAAATGGGGACATGAAAGCGAAGGAACCGTCGAGCAAAGCCCAGAGCGTGTAA ATGCCTATCAATACCGAATCTACGCCGCCTCCCTTGATCGGAAAAATTGGCCCTTACACCGTGTTCATGACCCCGCCGTCCACTCCTTCGCCCGCCTCTCCGCCGCAGCCGGTTTTCGAGTCCCCTAAGAAGGTCATTCAGCCGCCTCCTGTTCAGCCTCCGCCTCAGCAGTTCGATAAGTCTGTTTCTGTTGATACTGTGGCTAATGGGAATGCCTCCGTCGCTGGATTCTTTCGAAATGCGGTCTCGAAAGTGCAGAATGCACATTCAAGCTTGGATGACCATTTGGCTCGCTGGTTCGGGTTAAATCAATCCAAGTACCAGTGGGCGCTAGATGACTATTACGAGAGCAAGGGAATGGAAAATGGGGACATGAAAGCGAAGGAACCGTCGAGCAAAGCCCAGAGCGTGTAA MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTVANGNASVAGFFRNAVSKVQNAHSSLDDHLARWFGLNQSKYQWALDDYYESKGMENGDMKAKEPSSKAQSV
BLAST of CmaCh11G003820 vs. TrEMBL
Match: A0A0A0LUN3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G423260 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 4.1e-62 Identity = 124/137 (90.51%), Postives = 128/137 (93.43%), Query Frame = 1
BLAST of CmaCh11G003820 vs. TrEMBL
Match: A0A061GXK7_THECC (Hydroxyproline-rich glycoprotein family protein OS=Theobroma cacao GN=TCM_039162 PE=4 SV=1) HSP 1 Score: 187.6 bits (475), Expect = 1.0e-44 Identity = 103/145 (71.03%), Postives = 113/145 (77.93%), Query Frame = 1
BLAST of CmaCh11G003820 vs. TrEMBL
Match: V4U164_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009829mg PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 8.7e-44 Identity = 103/141 (73.05%), Postives = 113/141 (80.14%), Query Frame = 1
BLAST of CmaCh11G003820 vs. TrEMBL
Match: A0A0B0PD50_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_30240 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 1.5e-43 Identity = 99/143 (69.23%), Postives = 114/143 (79.72%), Query Frame = 1
BLAST of CmaCh11G003820 vs. TrEMBL
Match: A0A067KSW6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10354 PE=4 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 9.6e-43 Identity = 93/119 (78.15%), Postives = 105/119 (88.24%), Query Frame = 1
BLAST of CmaCh11G003820 vs. TAIR10
Match: AT2G18910.1 (AT2G18910.1 hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 157.9 bits (398), Expect = 4.4e-39 Identity = 88/138 (63.77%), Postives = 100/138 (72.46%), Query Frame = 1
BLAST of CmaCh11G003820 vs. NCBI nr
Match: gi|659107262|ref|XP_008453592.1| (PREDICTED: uncharacterized protein LOC103494256 [Cucumis melo]) HSP 1 Score: 246.5 bits (628), Expect = 2.7e-62 Identity = 125/137 (91.24%), Postives = 128/137 (93.43%), Query Frame = 1
BLAST of CmaCh11G003820 vs. NCBI nr
Match: gi|449457179|ref|XP_004146326.1| (PREDICTED: wiskott-Aldrich syndrome protein family member 2 [Cucumis sativus]) HSP 1 Score: 245.4 bits (625), Expect = 6.0e-62 Identity = 124/137 (90.51%), Postives = 128/137 (93.43%), Query Frame = 1
BLAST of CmaCh11G003820 vs. NCBI nr
Match: gi|1009105372|ref|XP_015877557.1| (PREDICTED: uncharacterized protein LOC107413704 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 206.1 bits (523), Expect = 4.0e-50 Identity = 110/138 (79.71%), Postives = 122/138 (88.41%), Query Frame = 1
BLAST of CmaCh11G003820 vs. NCBI nr
Match: gi|802615304|ref|XP_012075117.1| (PREDICTED: uncharacterized protein LOC105636452 [Jatropha curcas]) HSP 1 Score: 196.4 bits (498), Expect = 3.2e-47 Identity = 104/138 (75.36%), Postives = 117/138 (84.78%), Query Frame = 1
BLAST of CmaCh11G003820 vs. NCBI nr
Match: gi|743930342|ref|XP_011009417.1| (PREDICTED: uncharacterized protein LOC105114548 [Populus euphratica]) HSP 1 Score: 193.4 bits (490), Expect = 2.7e-46 Identity = 106/146 (72.60%), Postives = 117/146 (80.14%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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