Carg09034 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg09034
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Hydroxyproline-rich glycoprotein family protein
Location	Cucurbita_argyrosperma_scaffold_063 : 194328 .. 197021 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTATCAATACCGAATCTACGCCGCCTCCCTTGATCGGAAAAATTGGCCCTTACACCGTGTTCATGACCCCGCCGTCCACTCCTTCGACCGCCTCCCCGCCGCAGCCGGTTTTCGAGTCCCCTAAGAAGGTCATTCAGCCGCCTCCTGTTCAGCCTCCGCCTCAGCAGTTCGATAAGTCTGTTTCTGTTGATACTGCGGCTAATGGGAATGCCTCCGTCGCTGGATTCTTTAGAAATGCGGTCTCGAAAGTGCAGAATGGTAATTCTTATTATTTGAAGTTAATGTTGCGATATTGAAGGTCCAGGAGACGGAATTTAGAGTATGATTTTAGTGTTTTTGCTTGTGGAGGTACACAAGAACTCCTCTAGGGAAATTGATGAGTTGTTGAATGATCGAATTTTGTGATTTCAGCAGTGTTTTAGCCCTATTGCTTCATGTGTTGCCATTGTTCCTTTTCTTTTTTGTTGTTGCCATTATTGGTAACAAGGGGAGACATGTTTATGAATCTTAGTACTCTCACTGTCTTGTCTTGTGATTTTCTTCTCTAACATAATGTTCTTCTGTATTTGCTTCTTCAAAGTTGGTTTTCTTGTCAAATTTGACGACTATCTCTGCGACAGTCCACTGCCAGTAAATTTAGACTTTCCCTCGAGGTTTTTAAACGTGTATACTAGGAAAAAGTTTCTACACCCTCATAAGAAATGCTTCAGGACTTTCCCTTTCAAGCTTATTGTCTTTTTTGAGCTTTCCTTCCTAGGCTTCCCGTTAATATTCTAAAACACGTCTCCTAGGGAGAGGTCTACACCCTTATAAGAAATGTTTTGTTCCCCTCTCTAACCGATGTTAGACCTCACTGCTAGAGAGATTTCTAGACCCTTATAAGAAATGCTTCGTTCCCCTCTCCAATCGATGTGGGATCTTTTAAGTCACCCCTTTTGGGGGCCAGCGTCCTCACTAGCACACCTTTCGGTGTCTGGCTCTAATACCATTTGTAACAGTACGAGGCTACTCCGTCTCTATTAGGGAGTCTTATAAGGAATGCTTCATTTCTCTCTTCAACCGACGTGCCATCTCTTTTGTATGCTCTCCACATGAATATGAATATGTGCAAAAATGTATAATAATCATTTGTTTGTGAGAATTGTGTTCTTGGTTGGGACATCGAGGGAAAGAACAGAACAAAAAGAATAAAATTAGTGGCAAACCTTTGCTTCATAGCTTAAATATTTCTTCCATGCAGCTTTTTTTTTTTTTTTTTTTTTTTTTCTGTAAACAATCAAAACATAAAGTTTTTGGTGCAATTTTGCAGCACATTCAAGCTTGGATGACCATTTGGCTCGCTGGTTCGGGTTAAATCAATCCAAGTACCAGTGGGCGCTAGATGACTATTACGAGAGCAAGGGAATGGTATGCATCTGCTCAAATTCATTAGTACTTCAATTTCATATTCTTGTGTATTCTTTTCTAAAATTTAGTGTTATTTCTCCTAATTCTTGAACATTTATACTCGTTCATTTCGCTTATCCATAGTCTATTTTTTTGGCCTTTTCATAATTGAAACAACCATAATAATTTATTGAAACTGCACACAAAGTAACTTTGAAGCGAACTTTCACTACCATTACATGAAATAACTTTGAAGTCAAGTGTCTATGTAACAGCCCAAGTTTACGCTAGCACATATTGTCCTCTTTAGGTTTTCCCTTCTAAGCTTTTCCTCAAAGTTTTTAAAACGCGTCTATTAGGGAGAGGTTTCTACACCCTCATAAAGAATATTTTGTTCCCCTCTCCAACCGATGTGAGATCTGACCAACCGATGTAACTTATCATTGAGTACATTTATTTTCATCGAATACATGGGTTAACTTGTGGAACCTATCTGTTGAGAAAGAAAAGTAGGATGAAGAGGCTAACCGTGCTGCGGACGTGTGATCAAAGTTAGCACTTATGCTTCTATAGAGTAAAGGGAAGCAATAATATATAAATTTCTTGCTTGCCTTTGCTGAATTCTATGATTTAGTGCTTGAACAAGAACCATATAGGTTCTTATTGCAAGGGAAGTGGGGAACTAATAGTAGTTCCTGTTATATAAAGTAAGTCCTGGAAACATCTTCAACCAACATAGTTTTCAAAACTCTGGGGGGAAAGTCCAGAGAAAAACCACAAAAAGAAGGATCAAATCTCTTGTTAGTAGGTGGACCGGAGGACTATCTCGGATGATAAGCAAGCCAGATACTGCGCGCGGAACACCCACAAAAAAGACCAATGTGTACGGTGAGAATGTGTGGGCTGCCCGATGGGAGGTGAGATTGTGAGATCCCCACCGTTAGTTGAGGAGAAGGGAATGTTAGCATTTATAACAATAAAAGGGTCGAAAGACCTACATCCAAACAGACCGTTTTAAAAAATCCCAGTCAGAGGAGAGAAAGCCAATGAAATGAATTCAACTATGTGTATATGAGATGTTGAATCATAGCATTCTTCTGTTACTGCAGGAAAATGGGGACATGAAAGCGAAGGAACCGTCGAGCAAAGCCCAGAGCGTGTAACAGGTGCTAAACATGTTTGGTTTTGTTTTGATATCACCTTTTGTTGCTATCCAGACATCAAAATCTCTCATCCTTGATAATGTTATGTAGGAAAAACTCCTCAAGTCTCTTGGGGACAGTTATCAGAACACTAACTTATAG

mRNA sequence

ATGCCTATCAATACCGAATCTACGCCGCCTCCCTTGATCGGAAAAATTGGCCCTTACACCGTGTTCATGACCCCGCCGTCCACTCCTTCGACCGCCTCCCCGCCGCAGCCGGTTTTCGAGTCCCCTAAGAAGGTCATTCAGCCGCCTCCTGTTCAGCCTCCGCCTCAGCAGTTCGATAAGTCTGTTTCTGTTGATACTGCGGCTAATGGGAATGCCTCCGTCGCTGGATTCTTTAGAAATGCGGTCTCGAAAGTGCAGAATGGAAAATGGGGACATGAAAGCGAAGGAACCGTCGAGCAAAGCCCAGAGCGTGTAACAGGTGCTAAACATGAAAAACTCCTCAAGTCTCTTGGGGACAGTTATCAGAACACTAACTTATAG

Coding sequence (CDS)

ATGCCTATCAATACCGAATCTACGCCGCCTCCCTTGATCGGAAAAATTGGCCCTTACACCGTGTTCATGACCCCGCCGTCCACTCCTTCGACCGCCTCCCCGCCGCAGCCGGTTTTCGAGTCCCCTAAGAAGGTCATTCAGCCGCCTCCTGTTCAGCCTCCGCCTCAGCAGTTCGATAAGTCTGTTTCTGTTGATACTGCGGCTAATGGGAATGCCTCCGTCGCTGGATTCTTTAGAAATGCGGTCTCGAAAGTGCAGAATGGAAAATGGGGACATGAAAGCGAAGGAACCGTCGAGCAAAGCCCAGAGCGTGTAACAGGTGCTAAACATGAAAAACTCCTCAAGTCTCTTGGGGACAGTTATCAGAACACTAACTTATAG

Protein sequence

MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPPPVQPPPQQFDKSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQSPERVTGAKHEKLLKSLGDSYQNTNL

Homology

[Close]

BLAST of Carg09034 vs. NCBI nr
Match: XP_022930193.1 (myb-related transcription factor, partner of profilin-like [Cucurbita moschata] >XP_022930194.1 myb-related transcription factor, partner of profilin-like [Cucurbita moschata] >XP_022930196.1 myb-related transcription factor, partner of profilin-like [Cucurbita moschata] >XP_023007095.1 myb-related transcription factor, partner of profilin-like [Cucurbita maxima] >XP_023007098.1 myb-related transcription factor, partner of profilin-like [Cucurbita maxima] >XP_023007106.1 myb-related transcription factor, partner of profilin-like [Cucurbita maxima])

HSP 1 Score: 146.7 bits (369), Expect = 5.2e-32
Identity = 90/126 (71.43%), Postives = 98/126 (77.78%), Query Frame = 0


Query: 1   MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPXXXXXXXXQFDK 60
           MPINTESTPPPLIGKIGPYTVFMTPPSTPS ASPPQPVFESPKKVIQ XXXXXXXXQFDK
Sbjct: 1   MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQXXXXXXXXXQFDK 60

Query: 61  SVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQSPERVTGAKHEKLLKSLGDS 120
           SVSVDT ANGNASVAGFFRNAVSKVQN      +  +++    R  G    K   +L D 
Sbjct: 61  SVSVDTVANGNASVAGFFRNAVSKVQN------AHSSLDDHLARWFGLNQSKYQWALDDY 120

Query: 121 YQNTNL 127
           Y++  +
Sbjct: 121 YESKGM 120

[Close]

BLAST of Carg09034 vs. NCBI nr
Match: XP_023530480.1 (uncharacterized protein LOC111793029 [Cucurbita pepo subsp. pepo] >XP_023530481.1 uncharacterized protein LOC111793029 [Cucurbita pepo subsp. pepo] >XP_023530482.1 uncharacterized protein LOC111793029 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 142.5 bits (358), Expect = 9.7e-31
Identity = 88/126 (69.84%), Postives = 96/126 (76.19%), Query Frame = 0


Query: 1   MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPXXXXXXXXQFDK 60
           MPINTESTPPPLIGKIGPYTVFMTPPSTPS ASPPQPVFESPKKVIQPXXXXXXXXQFDK
Sbjct: 1   MPINTESTPPPLIGKIGPYTVFMTPPSTPSPASPPQPVFESPKKVIQPXXXXXXXXQFDK 60

Query: 61  SVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQSPERVTGAKHEKLLKSLGDS 120
           SVSV    NGNASVAGFFRNAVSKVQN      +  +++    R  G    K   +L D 
Sbjct: 61  SVSVAGVGNGNASVAGFFRNAVSKVQN------AHSSLDDHLARWFGLNQSKYQWALDDY 120

Query: 121 YQNTNL 127
           Y++  +
Sbjct: 121 YESKGM 120

[Close]

BLAST of Carg09034 vs. NCBI nr
Match: XP_008453592.1 (PREDICTED: uncharacterized protein LOC103494256 [Cucumis melo])

HSP 1 Score: 131.7 bits (330), Expect = 1.7e-27
Identity = 79/126 (62.70%), Postives = 89/126 (70.63%), Query Frame = 0


Query: 1   MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPXXXXXXXXQFDK 60
           MPIN+ESTPPPLIGKIGPYTVFMTPP TPS  S PQPVFESPKKVIQP  XXXXX QFDK
Sbjct: 1   MPINSESTPPPLIGKIGPYTVFMTPPPTPSPTSQPQPVFESPKKVIQPPPXXXXXHQFDK 60

Query: 61  SVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQSPERVTGAKHEKLLKSLGDS 120
           SVS+    NGNASV+GFFRNAVSKVQN      +   ++    R  G    K   +L D 
Sbjct: 61  SVSLAAVPNGNASVSGFFRNAVSKVQN------AHSRLDDHLARWFGLNQSKYQWALDDY 120

Query: 121 YQNTNL 127
           Y++  +
Sbjct: 121 YESKGM 120

[Close]

BLAST of Carg09034 vs. NCBI nr
Match: XP_004146326.1 (PREDICTED: wiskott-Aldrich syndrome protein family member 2 [Cucumis sativus] >XP_011656891.1 PREDICTED: wiskott-Aldrich syndrome protein family member 2 [Cucumis sativus] >KGN65468.1 hypothetical protein Csa_1G423260 [Cucumis sativus])

HSP 1 Score: 131.3 bits (329), Expect = 2.2e-27
Identity = 76/126 (60.32%), Postives = 88/126 (69.84%), Query Frame = 0


Query: 1   MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPXXXXXXXXQFDK 60
           MPIN+ESTPPPLIGKIGPYTVFMTPP TPS  S PQP+FESPKKVIQP   XXX  QFDK
Sbjct: 1   MPINSESTPPPLIGKIGPYTVFMTPPPTPSPTSQPQPLFESPKKVIQPPPVXXXPHQFDK 60

Query: 61  SVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQSPERVTGAKHEKLLKSLGDS 120
           SVS+    NGNASV+GFFRNAVSKVQN      +  +++    R  G    K   +L D 
Sbjct: 61  SVSLAAVPNGNASVSGFFRNAVSKVQN------AHSSLDDHLARWFGLNQSKYQWALDDY 120

Query: 121 YQNTNL 127
           Y++  +
Sbjct: 121 YESKGM 120

[Close]

BLAST of Carg09034 vs. NCBI nr
Match: XP_022134561.1 (uncharacterized protein LOC111006798 [Momordica charantia] >XP_022134562.1 uncharacterized protein LOC111006798 [Momordica charantia])

HSP 1 Score: 123.6 bits (309), Expect = 4.7e-25
Identity = 74/126 (58.73%), Postives = 85/126 (67.46%), Query Frame = 0


Query: 1   MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPXXXXXXXXQFDK 60
           MPIN+ESTPPPLIGKIGPYTVFMTPPSTPS  S PQPVFESPKKV+ P        QFDK
Sbjct: 1   MPINSESTPPPLIGKIGPYTVFMTPPSTPSPVSQPQPVFESPKKVVLP-----PPQQFDK 60

Query: 61  SVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQSPERVTGAKHEKLLKSLGDS 120
           S +V   ++GNASVAGFFRNAVSKVQN      +  +++    R  G    K   +L D 
Sbjct: 61  SAAV---SDGNASVAGFFRNAVSKVQN------AHSSLDDHLARWFGLNQSKYQWALDDY 112

Query: 121 YQNTNL 127
           Y+N  L
Sbjct: 121 YENKGL 112

[Close]

BLAST of Carg09034 vs. TAIR10
Match: AT2G18910.1 (hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 70.1 bits (170), Expect = 1.1e-12
Identity = 58/124 (46.77%), Postives = 77/124 (62.10%), Query Frame = 0


Query: 1   MPINTE-STPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPXXXXXXXXQFD 60
           MPIN + STPPP+IGKIGPYTVFMTPP+TP     P  V + P   +  XXXXXXX QF 
Sbjct: 1   MPINKDPSTPPPVIGKIGPYTVFMTPPATPKPPESPSAVSQKP---VXXXXXXXXXQQF- 60

Query: 61  KSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQSPERVTGAKHEKLLKSLGD 120
           KSV+   +++ + SV GFF+NAV+KVQN      +  +V+    R  G    K   +L +
Sbjct: 61  KSVA---SSDQDGSVLGFFKNAVTKVQN------AHSSVDDHLVRWFGLNQSKYQWALDE 111

Query: 121 SYQN 124
            Y++
Sbjct: 121 YYES 111

[Close]

BLAST of Carg09034 vs. TrEMBL
Match: tr|A0A1S3BXF0|A0A1S3BXF0_CUCME (uncharacterized protein LOC103494256 OS=Cucumis melo OX=3656 GN=LOC103494256 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.1e-27
Identity = 79/126 (62.70%), Postives = 89/126 (70.63%), Query Frame = 0


Query: 1   MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPXXXXXXXXQFDK 60
           MPIN+ESTPPPLIGKIGPYTVFMTPP TPS  S PQPVFESPKKVIQP  XXXXX QFDK
Sbjct: 1   MPINSESTPPPLIGKIGPYTVFMTPPPTPSPTSQPQPVFESPKKVIQPPPXXXXXHQFDK 60

Query: 61  SVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQSPERVTGAKHEKLLKSLGDS 120
           SVS+    NGNASV+GFFRNAVSKVQN      +   ++    R  G    K   +L D 
Sbjct: 61  SVSLAAVPNGNASVSGFFRNAVSKVQN------AHSRLDDHLARWFGLNQSKYQWALDDY 120

Query: 121 YQNTNL 127
           Y++  +
Sbjct: 121 YESKGM 120

[Close]

BLAST of Carg09034 vs. TrEMBL
Match: tr|A0A0A0LUN3|A0A0A0LUN3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423260 PE=4 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 1.5e-27
Identity = 76/126 (60.32%), Postives = 88/126 (69.84%), Query Frame = 0


Query: 1   MPINTESTPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPXXXXXXXXQFDK 60
           MPIN+ESTPPPLIGKIGPYTVFMTPP TPS  S PQP+FESPKKVIQP   XXX  QFDK
Sbjct: 1   MPINSESTPPPLIGKIGPYTVFMTPPPTPSPTSQPQPLFESPKKVIQPPPVXXXPHQFDK 60

Query: 61  SVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQSPERVTGAKHEKLLKSLGDS 120
           SVS+    NGNASV+GFFRNAVSKVQN      +  +++    R  G    K   +L D 
Sbjct: 61  SVSLAAVPNGNASVSGFFRNAVSKVQN------AHSSLDDHLARWFGLNQSKYQWALDDY 120

Query: 121 YQNTNL 127
           Y++  +
Sbjct: 121 YESKGM 120

[Close]

BLAST of Carg09034 vs. TrEMBL
Match: tr|A0A251JDP4|A0A251JDP4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G156800 PE=4 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.7e-18
Identity = 70/127 (55.12%), Postives = 86/127 (67.72%), Query Frame = 0


Query: 1   MPINTE-STPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPXXXXXXXXQFD 60
           MPIN + STPPP+IGKIGPYTVFMTPP TP  A P  PVF+SPKK++ PXXXXXXXXQ D
Sbjct: 1   MPINKDPSTPPPIIGKIGPYTVFMTPPCTPKPAEP--PVFDSPKKMVSPXXXXXXXXQID 60

Query: 61  KSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQSPERVTGAKHEKLLKSLGD 120
           KSVS  T ++G  SV+GFFRNA++KVQN          +++   R  G    K   +L D
Sbjct: 61  KSVSAQTLSDG--SVSGFFRNALNKVQN------VNSRLDEHLARWFGLNQSKYQWALDD 117

Query: 121 SYQNTNL 127
            Y++  L
Sbjct: 121 YYESKEL 117

[Close]

BLAST of Carg09034 vs. TrEMBL
Match: tr|A0A067KSW6|A0A067KSW6_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10354 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.8e-17
Identity = 70/127 (55.12%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 1   MPINTE-STPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPXXXXXXXXQFD 60
           MPIN + STPPP+IGKIGPYTVFMTPPSTP  A   QPVF SPKKV   XXXXXXXX  +
Sbjct: 1   MPINKDPSTPPPMIGKIGPYTVFMTPPSTPKPAEMDQPVFHSPKKVXXXXXXXXXXXXIE 60

Query: 61  KSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQSPERVTGAKHEKLLKSLGD 120
           KSVSV + ++G  SV+ FFRNAV+KVQN      +  ++++   R  G    K   +L D
Sbjct: 61  KSVSVHSLSDG--SVSEFFRNAVTKVQN------AHSSLDEHLARWFGLNQSKYQWALDD 119

Query: 121 SYQNTNL 127
            Y+N  L
Sbjct: 121 YYENKEL 119

[Close]

BLAST of Carg09034 vs. TrEMBL
Match: tr|A0A251KL84|A0A251KL84_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G022800 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 6.9e-17
Identity = 70/127 (55.12%), Postives = 85/127 (66.93%), Query Frame = 0


Query: 1   MPINTE-STPPPLIGKIGPYTVFMTPPSTPSTASPPQPVFESPKKVIQPXXXXXXXXQFD 60
           MPIN + STPPP+IGKIGPYTVFMTPPSTP    P +PVF+SPKKV   XXXXXXXXQ D
Sbjct: 1   MPINRDPSTPPPVIGKIGPYTVFMTPPSTP---KPVEPVFDSPKKVXXXXXXXXXXXQID 60

Query: 61  KSVSVDTAANGNASVAGFFRNAVSKVQNGKWGHESEGTVEQSPERVTGAKHEKLLKSLGD 120
           KSVS    + G  SV+GFFRNAV+KVQN      +  ++++   R  G    K   +L D
Sbjct: 61  KSVSAQPLSGG--SVSGFFRNAVNKVQN------AHSSLDEHLARWFGLNQSKYQWALDD 116

Query: 121 SYQNTNL 127
            Y++  L
Sbjct: 121 YYESKEL 116

The following BLAST results are available for this feature:

BLAST of Carg09034 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022930193.1	5.2e-32	71.43	myb-related transcription factor, partner of profilin-like [Cucurbita moschata] ...	[more]
XP_023530480.1	9.7e-31	69.84	uncharacterized protein LOC111793029 [Cucurbita pepo subsp. pepo] >XP_023530481....	[more]
XP_008453592.1	1.7e-27	62.70	PREDICTED: uncharacterized protein LOC103494256 [Cucumis melo]	[more]
XP_004146326.1	2.2e-27	60.32	PREDICTED: wiskott-Aldrich syndrome protein family member 2 [Cucumis sativus] >X...	[more]
XP_022134561.1	4.7e-25	58.73	uncharacterized protein LOC111006798 [Momordica charantia] >XP_022134562.1 uncha...	[more]

BLAST of Carg09034 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G18910.1	1.1e-12	46.77	hydroxyproline-rich glycoprotein family protein	[more]

BLAST of Carg09034 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg09034 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BXF0\|A0A1S3BXF0_CUCME	1.1e-27	62.70	uncharacterized protein LOC103494256 OS=Cucumis melo OX=3656 GN=LOC103494256 PE=...	[more]
tr\|A0A0A0LUN3\|A0A0A0LUN3_CUCSA	1.5e-27	60.32	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423260 PE=4 SV=1	[more]
tr\|A0A251JDP4\|A0A251JDP4_MANES	3.7e-18	55.12	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G156800 PE=4 SV=...	[more]
tr\|A0A067KSW6\|A0A067KSW6_JATCU	1.8e-17	55.12	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_10354 PE=4 SV=1	[more]
tr\|A0A251KL84\|A0A251KL84_MANES	6.9e-17	55.12	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_06G022800 PE=4 SV=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg09034-RA	Carg09034-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 88..126
None	No IPR available	PANTHER	PTHR37376	FAMILY NOT NAMED	coord: 1..89

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg09034	Cla018841	Watermelon (97103) v1	carwmB0594
Carg09034	Csa1G423260	Cucumber (Chinese Long) v2	carcuB0619
Carg09034	MELO3C017451	Melon (DHL92) v3.5.1	carmeB0599
Carg09034	ClCG06G013460	Watermelon (Charleston Gray)	carwcgB0581
Carg09034	CSPI01G20390	Wild cucumber (PI 183967)	carcpiB0625
Carg09034	Cucsa.081190	Cucumber (Gy14) v1	carcgyB0664
Carg09034	CmaCh11G003820	Cucurbita maxima (Rimu)	carcmaB0830
Carg09034	CmaCh10G003890	Cucurbita maxima (Rimu)	carcmaB0828
Carg09034	CmoCh11G003790	Cucurbita moschata (Rifu)	carcmoB0808
Carg09034	CmoCh10G004160	Cucurbita moschata (Rifu)	carcmoB0806
Carg09034	Lsi06G011880	Bottle gourd (USVL1VR-Ls)	carlsiB540
Carg09034	Cp4.1LG18g06350	Cucurbita pepo (Zucchini)	carcpeB0843
Carg09034	Cp4.1LG04g13180	Cucurbita pepo (Zucchini)	carcpeB0847
Carg09034	CsGy1G020200	Cucumber (Gy14) v2	carcgybB0591
Carg09034	MELO3C017451.2	Melon (DHL92) v3.6.1	carmedB0606
Carg09034	CsaV3_1G031720	Cucumber (Chinese Long) v3	carcucB0626
Carg09034	Cla97C06G122920	Watermelon (97103) v2	carwmbB0623
Carg09034	Bhi02G000557	Wax gourd	carwgoB0711

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg09034	Carg15234	Silver-seed gourd	carcarB537

The following block(s) are covering this gene:


Gene	Organism	Block
Carg09034	Cucumber (Gy14) v2	carcgybB0597
Carg09034	Cucumber (Gy14) v1	carcgyB0666
Carg09034	Cucurbita maxima (Rimu)	carcmaB0831
Carg09034	Cucurbita maxima (Rimu)	carcmaB0837
Carg09034	Cucurbita moschata (Rifu)	carcmoB0809
Carg09034	Cucurbita moschata (Rifu)	carcmoB0815
Carg09034	Cucurbita pepo (Zucchini)	carcpeB0842
Carg09034	Cucurbita pepo (Zucchini)	carcpeB0848
Carg09034	Wild cucumber (PI 183967)	carcpiB0631
Carg09034	Cucumber (Chinese Long) v2	carcuB0625
Carg09034	Cucumber (Chinese Long) v3	carcucB0632
Carg09034	Bottle gourd (USVL1VR-Ls)	carlsiB537
Carg09034	Watermelon (Charleston Gray)	carwcgB0578
Carg09034	Watermelon (97103) v1	carwmB0593
Carg09034	Watermelon (97103) v2	carwmbB0620