Cp4.1LG04g08270 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG04g08270
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionFar upstream element-binding protein
LocationCp4.1LG04 : 3255918 .. 3261139 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGTGCTCGTCGAACTCCAAAGCCCTATCACCGCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCCCACTCCCACTCTCACTCCCACCGCCATGAAAGACCACCAAGATACCCAAGAGCTTCACCCCGACACTAACAAGCGCAAGCTCGAACAGAACATTCAATTGGCTAAGCAGAAAGCTCAGGAAATCGTTGCTAAGCTTGTGAGCAATGCCGAGTCTAAACGCCCTCGCTTTGACTACGAACCCCCCTCTGCTTCCCCCGCCTCTCAAAATCCACTGTCATCCGCTTCCCCCTTTCCTGGTAAGCATGTTCAATTTCTTCGACTCCTTTTTCTTTTCTTCTTTTTAATTTAGGTAAAGTGGATGTTCTGCTTCTCTATTTTTATGCTTTGGAGTTTGTTCGAACATGTGTGGAATTGTTACGGATTCTTGCGACACGAGTCTTTAATGATTCATTTGTGGTTGGATTTTTGGCTATGTTGTTAGCATAGAAATACGCCGATGTTGGATACGTGGATAAACAATCTTCTTGTCCATTACTCTGATTTTGTTCTAGCTTTTAAGATTTTGCGCTTCTCTGATATTTTATTGTCAAGTTTGTTAAATTTTGTCCACCTATATTTTTTAGACAAGGGGAACTGGAGTGGGCCTTTATGGAGCCTTTTAGGGCTTTGGGAGGAGTCATAGCAAAAGGGTAATCTCTGCTATCGAAATTTTGGAGAAGCCTTCTCGCGGTCTATCGAATTTTAATTTAAAGATGAGTCTTCTTTGTGGGGTGACATCAATCTTTCGGCCACCTTATCCAAGGGGTTCGGGAAAGAATTTTGGAGAGAATTATGCCGTTTCTACCCATTAGAACCCAATGATATAGACATACTTCTTTATGTAGGTTTCCTCCCTGTTGATATCATATCTGGCAATGGGGATGTCGATGCAAATGAAAATCTCCCATTGTCGAAACTTGTAGCTTGATGCAAATGAAAATCTCCCTTTCACATTTAACAACAAGTAGCTCCACGTTTATACAACTCCACCTCTAGCTATGGTATCATTTGGATCAATCTTGCTTAAGTTTTGTGGTCATTGCAAGCATTTGTGGGAGAGATTCGAGAGAAGACAGGTTGGTACACAAAATACAGCTGAATTGACAGTGGAAGACCCCTTGGGTGATCTATTACGAAACTAAGGAGTCACTTGGGAGGTTTCAAATTGACAGTGGAAGACCTCCCTTGTGGTCTTTAATGTAGCTAAGGAGTCACTGGGGAAGGTTTTCCATTGTTAAAATTGGGAAGAAAAGACCTTTATGGATGATAGATTGGATAGATTATTTCCCCTTGATGTATGCTATTAGTAACAAGAAGGAAAAGAAAAGGGTTGTATGCAATGTGTTGGATGGTGAGACTCCTTTGTGGAGCATCACTGCTAGAAGGAACTTGTTAGAGGCAGAGATGGAAGATTTTGAGGCTTTGGTTGCAGAATATGAAACTTTTAGACATCAGAGAACTTCTGGCTGAGGTCCTTGTTGCAAATCCTGATTACAAATAGTTTTCTTCTTCCAATAGCACTCGCTCTTGCAATAAAGAAGGATAACAACCCCGAAAAAGTGAATTTTTTGTGTGGACCCTTTGTTTGGGGGAGTATTAATCCTGGAAATAGATCAAAGGAGATGGCCTTCGTTTTCTGTCCTTCAATTCAATCTAGTGCAATTTGTGTTTAAATACAAAGGAGAGTTGAAATCACGTCCTCTTCACAGCCAATTAAGGAGTTAATGAAACTTCATCTGTCAGAGCTTCAATCTACAATGGTGCTTCCACTCAACTACAAAGGAGAACACTTCCCAATTGCCTTTGGGCTACAGTAAAAAAGAAGGCAAAGATCCTCCTCGACATTATTGATATAGGCTTATGGGATTTTTAAAGAGAGAGAAATGACTGTGTTCAATGACAAGATTAGAGGGTGGGTAGAGGTGATAGAGCTAGGGAAGGGAAGTTTCTGTCATTCAACTACACCTTCATGTAATTTTTCCCCAATTGAAGTCTTTAATAGTTACCAGTACCACCTTTATGTAATTAATGGGAATTGGGAATCTTTTTGTAGTAATTAGAGGGTAGTTTAGGCTAGAAATTTCTGTTTCTTTTAGTTGATAACAAAAGGAGAGTTTTAAAAAAATATTGTAATAGACACTTCAATTTGAGGCTGTGTATTATACAATTCACATTGACAATCTTTCTTTTTTTCCCCTTCTCTTCTTTGTTTGTTTATTTATTATAATGGATTGTGTAACTCTTCTTTATAAAGAACTAATTGTATTAGTTTCGAGGTATGATTATGATGTAGTCTTAATTCTATATTCAATTGCCTGTTACTTGAGATTCTTTTTCAGCACATTTAGTATGCTTACTAATCACGAAGTAGACATTCCTTTATTTTTATACTCAAACACTGTCGTGTCATGTGTCACTTCTTGCATTCGATTTTTCAACATGCATTGGCAACTTTGAGATTCACTTTTCTGTAAATACTAAGCATGTAGTTATATTTCTATTGAAAAGAAGCACAAATTTCCAATTCCAGATTTTGCTAACTTTCAAGTTGTTCAGTTTCTTCTGGTACTCAAACAGGTCCATACCATGGTTTTCAAAGCACGAGTAAGAAAATAAATATTCCAAATATTAAGGTACTTGGTTGCCATCTTGTCTGTTAGATTACCATTTGCCTACTGCTGTCAAAGCTGATTTTTTCTTTTCAAATCCTTTTGTAGGTTGGGTTGATTATTGGGAAAGGTGGAGAAACCATCAAATACCTTCAACTCCAGTCAGGGGCTAAAATTCAGATCACCAGAGATTTCGAAGCTGATCCTCAATCTTTGACAAGAGATGTGGAATTAATGGGCACTTCAGAACAAGTTAGCAGGGCAGAACAGCTTATCAATGAAGTAATGGCAGAGGTGAAGCGCTGATTAAAATGCTTTATCATTGTCAACTCTTGTATGTTGGAGATGTGAAGCTATTTAGACACCTTAATGTAACAGGCAGATTCAGGAGCTTCTCCTGCAACCACAAATCAGGGAATGACCTCAAGTCAACCTGGAGTTGAGCAGTTCGTAATGAAGATTCCTAACAATAAGGTAATTTCTTTTAATGTGTTTTATCCATCCTTTAAGGTTAATCTAATATTATGATAAGAATGTTGTTATAGGTTGCACTTGTCATTGGAAAGGGAGGCGAGACTATAAAGGGCATACAGAGCAAGTCAGCAGCTCGTGTTCAGGTATGTAATTTGTGGGAATTAGAGTCTATTGAACCATTGCCATTGCAATTATTGCAGTTCAAGAACAGCTTAGAGTTTCTAAAATTAGCAAGCACAGTAACATTACTGCTTGACCCTGTTTTGTTAGATTTGTAACTTTGAATTGTCAGACTCAGAAAGTTTACTAGAAAAGTATACTTCAAATAAAAAATTCTCCATTTCATCATTCGTACATCTTAGGATGCATTTGGTTGATGATCCTACAAGAATTTGAAACAAAGATTCACAGCCTGTTATTTTTAGATACGTGTTTGATAATGGATTTAAAATATTGAAAATATGCAAGGTTGTTTTCAAAATTTTCACATTTTAATCTAAACATTGTCCGGTAATGCTGTTTATCATCTTCTTGTATGGACTCTCACCCTTCAGGTTATCCCTTTGCACCTTCCTCCCGGCGATACATCGACAGAGAGAAATGTTTATATTAATGGGCTGAAGGAGCAGATTGAGTCAGCTAAAGAATTGATTAATGAAGTAATGAGTGGGGTGAGTCATCAACTCCCTTTATTGCCTTTCAAACTTCTCCTCACCTATGTCCCCGATTTTCTCTGGCTCTACTAATTTTCTGCTGAGATTTCTGTGGTTTATCTATCTGGTATATTATCACGTGCATGAAAATCCGAAGTATTGAAAGGCAATATTTTCTATGATGGTTTTATGAAGGCTCGGTTTGAAATGACTTTTCTAGTGGTTAAAAACACTTTTTAAACTTTAAAACCATTTTTTAAGCACTTTGAAAGTCATTCTTAATAGGCTCGTAGTTTTCTTGGCTTGTGTTTTTGAACATTAGGCTCTTGTATGGTAGCTGAAGTTCAACTGCACATCATTTCAACTATCTTTCAATAGGAACGTTTAAAATTTCATTCATTTTTTAAGAGATTGACATGAGCTTTGATAGACTGCTGGAATTTGAATGTTATTATCTCTGAGACATAAATGCCCCCCTTTCTGCAGAAACGTCTGGTGAATACATCTGAAACTACTAGCTATGCCCAATCAACTTACCCTCCTCCTACCAATTGGTCTCAAGCTGGACAACAACCTCCCTTGCAGCAACAGCAACAACCCCAATATGGATATGCGCCAGGAACCTATCCTCCAACCCCAGGGCCTCCGTATTATAGTAACTATCCAACTCAAGTAGGAAGCTGGGATCATGCGAACCAAGCAAGTATTCAGCCATCAGAACAAAGTACAGGATATAATTACTATGGACAACAGTCTCAGGTTGGGTCAGCTCCTCCATATCCTGGCTATGGTTATGGTCAGCCAGGTTCAGCCGCCACTCATGGTTATGATCAGACCTACTCCCAACAGGTATCGAGTTATGGGCAAAACTACTCGGACCAAATTCCACCTTACGATCAGCAGAACATGTACCTTAACTCAGGAGGTGCACCACCTGGTGTGCTATCAACAAATGGAACCGACACTGAAGGTACATATCCGACTGCAGCATACCAAGTTTCAGACGGCCAGCCAGTTGTCAACTCTATGAACGGTTACTGGACGTACCCAAGCGACCTGACCCAATCACTTCCTCAGACAGGGAATGACCAGTCTGGTTATTATCAAACAGTAAGCGGGGGACAGGAGCAGCCTCCTGTCGCTTTTCAACCTGTCTACGCACAGAGTGGGTACCCTCCTCCACCAGGCGTGTATGCTCAGGAAGTAACCCTCTCGGCCCCGGCTATGACTCCTACCCAACCACAACCACCAGCTCTTCCACAGACAGAGGCTCAAACCCAACCACAACCACAACCACCTGCTCCTCCACAGCCAGAGGCTCAAACCCAATCACAACCACCAGCTCCTCCACCGACAGAGGCTCAAACCCAGCCACAACCGCCAGCTCCTCCACAGACGGAGGCTCAAACCCAACCAGAACCACCGTCACATGAACTGAGT

mRNA sequence

TTTGTGCTCGTCGAACTCCAAAGCCCTATCACCGCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCCCACTCCCACTCTCACTCCCACCGCCATGAAAGACCACCAAGATACCCAAGAGCTTCACCCCGACACTAACAAGCGCAAGCTCGAACAGAACATTCAATTGGCTAAGCAGAAAGCTCAGGAAATCGTTGCTAAGCTTGTGAGCAATGCCGAGTCTAAACGCCCTCGCTTTGACTACGAACCCCCCTCTGCTTCCCCCGCCTCTCAAAATCCACTGTCATCCGCTTCCCCCTTTCCTGTTTCTTCTGGTACTCAAACAGGTCCATACCATGGTTTTCAAAGCACGAGTTGGGTTGATTATTGGGAAAGGTGGAGAAACCATCAAATACCTTCAACTCCAGGAATGACCTCAAGTCAACCTGGAGTTGAGCAGTTCGTAATGAAGATTCCTAACAATAAGGTTGCACTTGTCATTGGAAAGGGAGGCGAGACTATAAAGGGCATACAGAGCAAGTCAGCAGCTCGTGTTCAGGTTATCCCTTTGCACCTTCCTCCCGGCGATACATCGACAGAGAGAAATGTTTATATTAATGGGCTGAAGGAGCAGATTGAGTCAGCTAAAGAATTGATTAATGAAGTAATGAGTGGGAAACGTCTGGTGAATACATCTGAAACTACTAGCTATGCCCAATCAACTTACCCTCCTCCTACCAATTGGTCTCAAGCTGGACAACAACCTCCCTTGCAGCAACAGCAACAACCCCAATATGGATATGCGCCAGGAACCTATCCTCCAACCCCAGGGCCTCCGTATTATAGTAACTATCCAACTCAAGTAGGAAGCTGGGATCATGCGAACCAAGCAAGTATTCAGCCATCAGAACAAAGTACAGGATATAATTACTATGGACAACAGTCTCAGGTTGGGTCAGCTCCTCCATATCCTGGCTATGGTTATGGTCAGCCAGGTTCAGCCGCCACTCATGGTTATGATCAGACCTACTCCCAACAGGTATCGAGTTATGGGCAAAACTACTCGGACCAAATTCCACCTTACGATCAGCAGAACATGTACCTTAACTCAGGAGGTGCACCACCTGGTGTGCTATCAACAAATGGAACCGACACTGAAGGTACATATCCGACTGCAGCATACCAAGTTTCAGACGGCCAGCCAGTTGTCAACTCTATGAACGGTTACTGGACGTACCCAAGCGACCTGACCCAATCACTTCCTCAGACAGGGAATGACCAGTCTGGTTATTATCAAACAGTAAGCGGGGGACAGGAGCAGCCTCCTGTCGCTTTTCAACCTGTCTACGCACAGAGTGGGTACCCTCCTCCACCAGGCGTGTATGCTCAGGAAGTAACCCTCTCGGCCCCGGCTATGACTCCTACCCAACCACAACCACCAGCTCTTCCACAGACAGAGGCTCAAACCCAACCACAACCACAACCACCTGCTCCTCCACAGCCAGAGGCTCAAACCCAATCACAACCACCAGCTCCTCCACCGACAGAGGCTCAAACCCAGCCACAACCGCCAGCTCCTCCACAGACGGAGGCTCAAACCCAACCAGAACCACCGTCACATGAACTGAGT

Coding sequence (CDS)

ATGAAAGACCACCAAGATACCCAAGAGCTTCACCCCGACACTAACAAGCGCAAGCTCGAACAGAACATTCAATTGGCTAAGCAGAAAGCTCAGGAAATCGTTGCTAAGCTTGTGAGCAATGCCGAGTCTAAACGCCCTCGCTTTGACTACGAACCCCCCTCTGCTTCCCCCGCCTCTCAAAATCCACTGTCATCCGCTTCCCCCTTTCCTGTTTCTTCTGGTACTCAAACAGGTCCATACCATGGTTTTCAAAGCACGAGTTGGGTTGATTATTGGGAAAGGTGGAGAAACCATCAAATACCTTCAACTCCAGGAATGACCTCAAGTCAACCTGGAGTTGAGCAGTTCGTAATGAAGATTCCTAACAATAAGGTTGCACTTGTCATTGGAAAGGGAGGCGAGACTATAAAGGGCATACAGAGCAAGTCAGCAGCTCGTGTTCAGGTTATCCCTTTGCACCTTCCTCCCGGCGATACATCGACAGAGAGAAATGTTTATATTAATGGGCTGAAGGAGCAGATTGAGTCAGCTAAAGAATTGATTAATGAAGTAATGAGTGGGAAACGTCTGGTGAATACATCTGAAACTACTAGCTATGCCCAATCAACTTACCCTCCTCCTACCAATTGGTCTCAAGCTGGACAACAACCTCCCTTGCAGCAACAGCAACAACCCCAATATGGATATGCGCCAGGAACCTATCCTCCAACCCCAGGGCCTCCGTATTATAGTAACTATCCAACTCAAGTAGGAAGCTGGGATCATGCGAACCAAGCAAGTATTCAGCCATCAGAACAAAGTACAGGATATAATTACTATGGACAACAGTCTCAGGTTGGGTCAGCTCCTCCATATCCTGGCTATGGTTATGGTCAGCCAGGTTCAGCCGCCACTCATGGTTATGATCAGACCTACTCCCAACAGGTATCGAGTTATGGGCAAAACTACTCGGACCAAATTCCACCTTACGATCAGCAGAACATGTACCTTAACTCAGGAGGTGCACCACCTGGTGTGCTATCAACAAATGGAACCGACACTGAAGGTACATATCCGACTGCAGCATACCAAGTTTCAGACGGCCAGCCAGTTGTCAACTCTATGAACGGTTACTGGACGTACCCAAGCGACCTGACCCAATCACTTCCTCAGACAGGGAATGACCAGTCTGGTTATTATCAAACAGTAAGCGGGGGACAGGAGCAGCCTCCTGTCGCTTTTCAACCTGTCTACGCACAGAGTGGGTACCCTCCTCCACCAGGCGTGTATGCTCAGGAAGTAACCCTCTCGGCCCCGGCTATGACTCCTACCCAACCACAACCACCAGCTCTTCCACAGACAGAGGCTCAAACCCAACCACAACCACAACCACCTGCTCCTCCACAGCCAGAGGCTCAAACCCAATCACAACCACCAGCTCCTCCACCGACAGAGGCTCAAACCCAGCCACAACCGCCAGCTCCTCCACAGACGGAGGCTCAAACCCAACCAGAACCACCGTCACATGAACTGAGT

Protein sequence

MKDHQDTQELHPDTNKRKLEQNIQLAKQKAQEIVAKLVSNAESKRPRFDYEPPSASPASQNPLSSASPFPVSSGTQTGPYHGFQSTSWVDYWERWRNHQIPSTPGMTSSQPGVEQFVMKIPNNKVALVIGKGGETIKGIQSKSAARVQVIPLHLPPGDTSTERNVYINGLKEQIESAKELINEVMSGKRLVNTSETTSYAQSTYPPPTNWSQAGQQPPLQQQQQPQYGYAPGTYPPTPGPPYYSNYPTQVGSWDHANQASIQPSEQSTGYNYYGQQSQVGSAPPYPGYGYGQPGSAATHGYDQTYSQQVSSYGQNYSDQIPPYDQQNMYLNSGGAPPGVLSTNGTDTEGTYPTAAYQVSDGQPVVNSMNGYWTYPSDLTQSLPQTGNDQSGYYQTVSGGQEQPPVAFQPVYAQSGYPPPPGVYAQEVTLSAPAMTPTQPQPPALPQTEAQTQPQPQPPAPPQPEAQTQSQPPAPPPTEAQTQPQPPAPPQTEAQTQPEPPSHELS
BLAST of Cp4.1LG04g08270 vs. Swiss-Prot
Match: FUBP3_HUMAN (Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3 PE=1 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 7.4e-09
Identity = 68/221 (30.77%), Postives = 93/221 (42.08%), Query Frame = 1

Query: 112 GVEQFVMKIPNNKVALVIGKGGETIKGIQSKSAARVQVIPLHLPPGDTSTERNVYINGLK 171
           GV++    +P +K  LVIGKGGE IK I  +S A V+ +  + PP      R   I G+ 
Sbjct: 353 GVQEITYTVPADKCGLVIGKGGENIKSINQQSGAHVE-LQRNPPPNSDPNLRRFTIRGVP 412

Query: 172 EQIESAKELINEVMSGKRLVNTSETTSYAQSTYPPPTNWSQAGQQPPLQQQQQPQYGYAP 231
           +QIE A++LI+E + G    N     ++ QS +  P         PP      P      
Sbjct: 413 QQIEVARQLIDEKVGG---TNLGAPGAFGQSPFSQPPAPPHQNTFPPRSSGCFPNMAAKV 472

Query: 232 GTYP---PTPGPPYY------SNY-----PTQVGSWDHANQASIQPSEQSTGYNYYGQQS 291
              P   P  GPP +      S Y     PTQ      +   S QP+      +YY +QS
Sbjct: 473 NGNPHSTPVSGPPAFLTQGWGSTYQAWQQPTQQVPSQQSQPQSSQPNYSKAWEDYYKKQS 532

Query: 292 QVGSAPPY----PGYGYGQPGSAATHGYDQTYSQQVSSYGQ 315
              SA P     P Y         T  + + Y QQV+ YGQ
Sbjct: 533 HAASAAPQASSPPDY---------TMAWAEYYRQQVAFYGQ 560

BLAST of Cp4.1LG04g08270 vs. TrEMBL
Match: A0A0A0K828_CUCSA (RNA-binding protein Nova-1 OS=Cucumis sativus GN=Csa_7G074890 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 2.5e-120
Identity = 259/368 (70.38%), Postives = 282/368 (76.63%), Query Frame = 1

Query: 106 MTSSQPGVEQFVMKIPNNKVALVIGKGGETIKGIQSKSAARVQVIPLHLPPGDTSTERNV 165
           + SSQPGVEQFVMKIPNNKVALVIGKGGETIK IQSKSAARVQ+IPLHLPPGDTSTER+V
Sbjct: 172 INSSQPGVEQFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQIIPLHLPPGDTSTERSV 231

Query: 166 YINGLKEQIESAKELINEVMSGKRLVNTSETTSYAQSTYPPPTNWSQAGQQPPLQQQQQP 225
           YINGLKEQIESAKELINEV+SGKRLV  SETTSYAQ TYP   NWSQAGQQPPL QQQQP
Sbjct: 232 YINGLKEQIESAKELINEVISGKRLV--SETTSYAQPTYPSTNNWSQAGQQPPL-QQQQP 291

Query: 226 QYGYAPGTYPPTPGPPYYSNYPTQVGSWDHANQASIQPSEQSTGYNYYGQQSQVGSAPP- 285
           QYGYA GTYPP  GPPYYS YP QV SWD +NQ+++QPS+QSTGYNYYGQQSQVGSAPP 
Sbjct: 292 QYGYAAGTYPPPQGPPYYSTYPAQVASWDQSNQSTVQPSDQSTGYNYYGQQSQVGSAPPQ 351

Query: 286 YPGYGYGQPGSAATHGYDQTYSQQVSSYGQNYSDQIPP-YDQQNMYLNSGGAPPGVLSTN 345
           +  Y YGQP S+ THGYDQ+YSQQ  SYG     QIPP YDQQNMYLNSG AP  + S+N
Sbjct: 352 FHDYSYGQPASSGTHGYDQSYSQQAPSYG-----QIPPSYDQQNMYLNSGSAPSALPSSN 411

Query: 346 GTDTEGTYPTAAYQVSDGQPVVNSMNGYWTY-PSDLTQSLPQTGNDQSGYYQTVSGGQEQ 405
           GT +EGTYPTAAYQ S          GYWTY  +D TQSLPQTGNDQSG YQTVSGG  Q
Sbjct: 412 GT-SEGTYPTAAYQAS---------TGYWTYQTTDQTQSLPQTGNDQSGSYQTVSGGHAQ 471

Query: 406 PPVAFQPVYAQSGYPPPPGVYAQEVTLSAPAMTPTQPQPPALPQTEAQTQPQPQPPAPP- 465
           P     PVY QS YPPPPGVY+         + PTQ QPP++  +E       Q  AP  
Sbjct: 472 P-----PVYGQSVYPPPPGVYSAPAPPPPEMVAPTQSQPPSVETSEDGNSNSGQNLAPTV 516

Query: 466 QPEAQTQS 470
           Q  A ++S
Sbjct: 532 QENANSES 516

BLAST of Cp4.1LG04g08270 vs. TrEMBL
Match: M5W6H0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002757mg PE=4 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 1.2e-85
Identity = 193/337 (57.27%), Postives = 220/337 (65.28%), Query Frame = 1

Query: 101 PST-PGMTSSQPGVEQFVMKIPNNKVALVIGKGGETIKGIQSKSAARVQVIPLHLPPGDT 160
           PST  G  S QPG EQFVMK+PNNKVAL+IGKGGETI+ +QSKS AR+QV+PLHLPPGD 
Sbjct: 168 PSTNQGFNSIQPGTEQFVMKVPNNKVALIIGKGGETIRNMQSKSGARIQVVPLHLPPGDM 227

Query: 161 STERNVYINGLKEQIESAKELINEVMSGKRLVNTSETTSYAQSTYPPPTNWSQAGQQPPL 220
           S ER+VYING+ EQIE+AKEL+NEV+SGKRLVNTS T SY Q +Y PP NW+  GQ P  
Sbjct: 228 SAERSVYINGVTEQIEAAKELVNEVISGKRLVNTSGTNSYMQQSYAPPGNWAPPGQAP-- 287

Query: 221 QQQQQPQYGYA-PGTYPPTPGPPYYSNYPTQVGSWDHANQA-SIQPSEQSTGYNYYGQQS 280
            QQQQP YGY  PG+Y P     YY NYPTQ   WD +NQ  S QP ++S+ YNYYGQQ 
Sbjct: 288 IQQQQPHYGYTQPGSYAPPAS--YYGNYPTQGAGWDQSNQVPSSQPPQESSAYNYYGQQP 347

Query: 281 QVGSAPPYPGYGYGQPGSAATHGYDQTYSQQVSSYGQNYSDQIPPYDQQNMYLNSGGAPP 340
            +GSAPP P Y Y Q    A+HGYDQ Y+QQ  SYGQN S Q P  DQQ  Y  SG  PP
Sbjct: 348 PMGSAPPNPSYNYNQTPPVASHGYDQGYAQQPPSYGQNISSQAPGSDQQQQYATSGYGPP 407

Query: 341 GVLST--NGTDTEGTYPTAAYQVSDGQPVVNSMNGYWTYPSDLTQSLPQTGNDQSGYYQT 400
            V S+      ++ T P+AAY V   QP  NS  GYW          P T   Q+GYYQT
Sbjct: 408 AVPSSVDGSASSQSTQPSAAYPVPYSQPPANSQAGYWQ---------PHT---QTGYYQT 467

Query: 401 VSGGQ---EQPPVAFQ-PVYAQSGYP-PPPGVYAQEV 428
             GGQ   E P  A Q  VY Q GYP P P  Y + V
Sbjct: 468 SYGGQQAVEDPSAASQSAVYGQGGYPQPDPSHYGEAV 488

BLAST of Cp4.1LG04g08270 vs. TrEMBL
Match: W9RBH1_9ROSA (Far upstream element-binding protein 2 OS=Morus notabilis GN=L484_026897 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.1e-75
Identity = 186/357 (52.10%), Postives = 226/357 (63.31%), Query Frame = 1

Query: 110 QPGVEQFVMKIPNNKVALVIGKGGETIKGIQSKSAARVQVIPLHLPPGDTSTERNVYING 169
           QPG EQFVMK+PNNKVAL+IGKGGETI+ +QS+S AR+Q++PLHLPPGDTSTER VYI+G
Sbjct: 187 QPGAEQFVMKVPNNKVALLIGKGGETIRNMQSRSGARMQIVPLHLPPGDTSTERTVYIDG 246

Query: 170 LKEQIESAKELINEVMSGKRLVNTSETTSYAQSTYPPPTNWSQAGQQPPLQQQQQPQYGY 229
           LKEQIESAKELINEV+SGKRLVN S   SY Q  Y    NW   GQ P    QQQPQYGY
Sbjct: 247 LKEQIESAKELINEVLSGKRLVNPSGANSYMQPAYAGAANWGAPGQPP---MQQQPQYGY 306

Query: 230 A-PGTY-PPTPGPPYYSNYPTQVGSWDHANQAS-IQPSEQSTGYNYYGQQSQVGSAPPYP 289
             PG+Y  P P   YYSN+PT V +WD ++QA+  Q  +QSTGY+YYGQQ+QVG AP  P
Sbjct: 307 TQPGSYGQPPPPASYYSNHPTSVAAWDPSHQATHSQQPQQSTGYDYYGQQTQVGLAPSNP 366

Query: 290 GYGYGQPGSAATHGYDQTYSQQVSSYGQNYSDQIPPYDQQNMYLNSG-GAPPGVLSTNGT 349
            Y Y Q    A+H Y Q+YSQQ S+YGQ  S Q+P  +Q N Y++S  GAPP   + +GT
Sbjct: 367 SYSYNQT-LPASHSYGQSYSQQPSNYGQPISSQVPVPNQPNPYVSSEYGAPPPSSNLDGT 426

Query: 350 -DTEGTYPTAAYQVSDGQPVVNSMNGYWTYPSDLTQSLPQTGNDQSGYYQTVSGGQEQ-- 409
             ++   P +AY  +  Q + NS  GYW Y S  +Q   Q   DQ+GYYQT+ G Q+   
Sbjct: 427 SSSQAMQPASAYPYAHSQTIDNSHAGYWAYSSSTSQPPAQPFYDQTGYYQTMYGSQQAQV 486

Query: 410 PPVAFQPVYAQSGYPPPPGVYAQEVTLSAPAMTPT---QPQPPALPQTEAQTQPQPQ 457
           P       Y + GYP            S  A  PT   Q   PA    + + QPQ Q
Sbjct: 487 PSAVPHSGYGEDGYP------------SQSASAPTDYDQATNPAQGGQQLEQQPQEQ 527

BLAST of Cp4.1LG04g08270 vs. TrEMBL
Match: B9S767_RICCO (RNA-binding protein Nova-1, putative OS=Ricinus communis GN=RCOM_0774000 PE=4 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 3.5e-66
Identity = 171/360 (47.50%), Postives = 211/360 (58.61%), Query Frame = 1

Query: 105 GMTSSQPGVEQFVMKIPNNKVALVIGKGGETIKGIQSKSAARVQVIPLHLPPGDTSTERN 164
           G+ + QPG EQF +++PN+KV L+IGKGGETIK +QS+S AR+Q+IPLHLPPGD +TER 
Sbjct: 171 GLNTKQPGAEQFSIRVPNDKVGLLIGKGGETIKYMQSRSGARMQIIPLHLPPGDPTTERT 230

Query: 165 VYINGLKEQIESAKELINEVMSGKRLVNTSETTSYAQSTYPPPTNWSQAGQQPPLQQQQQ 224
           VYINGL EQIE+AKEL+N+V++GKR+++ + ++SY Q TYP   NW+Q GQ P     QQ
Sbjct: 231 VYINGLTEQIEAAKELVNDVLNGKRIIDPTGSSSYGQPTYPATGNWAQPGQTP----MQQ 290

Query: 225 PQYGYAPGTYPPTPGPPYYSNYPTQVGSWDHANQASIQPSEQSTGYNYYGQQSQVGSAPP 284
           PQYGYA     PTP P YY NY TQ  +WD +N  ++  ++Q  GY YYGQQ Q+GSAP 
Sbjct: 291 PQYGYAQPGNQPTP-PAYYGNY-TQQPAWDQSNPTTMSQTQQMAGYGYYGQQPQMGSAPL 350

Query: 285 YPGYGYGQPGSAATHGYDQTYSQQVSSYGQNYSDQIPPYDQQNMYLNS-------GGAPP 344
              Y    P   A+ GY  +YSQQ S+YGQN S Q P  +QQ  Y  S            
Sbjct: 351 NSSYNQTPP--VASSGYGNSYSQQTSNYGQNISSQTPTLEQQRPYATSNYGSAAVSSQSD 410

Query: 345 GVLSTNGTDTEGTYPTAAY--QVSDGQPVVNSMNGYWTYPSDLTQSLPQTGNDQSGYYQT 404
           G +S+  T     YP  AY  QV+D Q        YWT      Q  PQTG DQ+GY Q 
Sbjct: 411 GAISSQSTQAAPAYPPPAYNQQVADPQT-------YWTAAGYAGQPPPQTGYDQTGYSQ- 470

Query: 405 VSGGQEQPPVAFQPVYAQSGYPPPPGVYAQEVTLSAPAMTPTQPQPPALPQTEAQTQPQP 456
              G      + QPVY Q GYP  P   A      A     T P     PQ EAQ Q QP
Sbjct: 471 --AGYGVSLSSNQPVYGQGGYPLQPSPAA------ANYAQGTNPLGYGQPQLEAQPQSQP 506

BLAST of Cp4.1LG04g08270 vs. TrEMBL
Match: A0A0K9R6D1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_101630 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61
Identity = 173/362 (47.79%), Postives = 203/362 (56.08%), Query Frame = 1

Query: 102 STP----GMTSSQPGVEQFVMKIPNNKVALVIGKGGETIKGIQSKSAARVQVIPLHLPPG 161
           STP    G    Q G EQFVMK+PN+KVALVIGKGGETIK +QSKS AR+QV+PLHLPPG
Sbjct: 165 STPSGNRGPPPPQAGGEQFVMKVPNDKVALVIGKGGETIKTMQSKSGARIQVVPLHLPPG 224

Query: 162 DTSTERNVYINGLKEQIESAKELINEVMSGKRLVNTSETTSYAQSTYPPPTNWSQAGQQP 221
           D STERN+YING  EQIE+AKEL+NEV+SG R   +S T SY QS YPP T W+  GQ  
Sbjct: 225 DFSTERNIYINGTPEQIEAAKELVNEVISGNRSKVSSGTNSYQQSGYPPSTGWTPQGQS- 284

Query: 222 PLQQQQQPQYGYA-PGTYPPTPGPPYYSNYPTQVGSWDHANQASIQPSEQSTGYNYYGQQ 281
               QQ P YGY+ PGTY   P PPYY  YP Q  +WD  NQ +  P +Q+TGY+ YGQ 
Sbjct: 285 --SAQQPPAYGYSQPGTY-AMPPPPYYGGYPPQANAWDQ-NQTAAPPQQQNTGYSAYGQA 344

Query: 282 SQVGSAPP-YPGYGYGQPGSAATHGYDQTYSQQVSSY----GQNYSDQIPPYDQQNMYLN 341
               S P     Y YGQ   AA + Y+Q Y+QQ  SY    GQ  + Q            
Sbjct: 345 QPPSSTPSNAANYNYGQMPPAAGYNYNQGYAQQPPSYGDVSGQTTASQPEGTAAVQTSQP 404

Query: 342 SGGAPPGVLSTNGTDTEGTYPTAAYQVSDGQPVVNSMNGYWTYPSDLTQSLP-QTGNDQS 401
           S GAP G        T  T P +AY     QP    +NGY  YPS  + + P Q   +Q+
Sbjct: 405 SYGAPDG--------TTQTQPASAYATGYSQPAAAPVNGYSAYPSYSSSAAPVQPAYNQT 464

Query: 402 GYYQTVSGGQEQPP-----VAFQPVYAQSGYP----PPPGVYAQE---VTLSAPAMTPTQ 441
           GY QT  G Q+Q        A    Y Q GYP    P  G Y Q     T+  P + PTQ
Sbjct: 465 GYSQTGYGQQQQQEGQVANQASYSYYGQGGYPPSQAPAQGGYYQSGYPPTVPPPQVPPTQ 513

BLAST of Cp4.1LG04g08270 vs. TAIR10
Match: AT2G25970.1 (AT2G25970.1 KH domain-containing protein)

HSP 1 Score: 141.7 bits (356), Expect = 1.2e-33
Identity = 147/400 (36.75%), Postives = 189/400 (47.25%), Query Frame = 1

Query: 110 QPGVEQFVMKIPNNKVALVIGKGGETIKGIQSKSAARVQVIPLHLPPGDTSTERNVYING 169
           Q G +QFVMKIPNNKV L+IGKGGETIK +Q+K+ AR+QVIPLHLPPGD + ER + I+G
Sbjct: 226 QAGADQFVMKIPNNKVGLIIGKGGETIKSMQAKTGARIQVIPLHLPPGDPTPERTLQIDG 285

Query: 170 LKEQIESAKELINEVMSGK-RLVNTSETTSYAQS---TYPPPTNWSQAGQQPPLQQQQQP 229
           + EQIE AK+L+NE++SG+ R+ N++    Y Q       PP++W+  G  P      QP
Sbjct: 286 ITEQIEHAKQLVNEIISGENRMRNSAMGGGYPQQGGYQARPPSSWAPPGGPP-----AQP 345

Query: 230 QYG--YAPGTYPPTP--GPPYYSNYPTQVGSWDHANQASIQPSEQST--GYNYYGQQ--- 289
            YG    PG YP  P  G   Y +YP Q  S  + +Q+S+ PS+QS    Y+YYGQQ   
Sbjct: 346 GYGGYMQPGAYPGPPQYGQSPYGSYPQQT-SAGYYDQSSVPPSQQSAQGEYDYYGQQQSQ 405

Query: 290 ---SQVGSAPP--YPGY-------GYGQPGSA-ATHGYDQTYSQQVSSYGQNYSDQIPPY 349
              S   SAPP    GY       GYGQ G      GY    + Q S YG     Q   Y
Sbjct: 406 QPSSGGSSAPPTDTTGYNYYQHASGYGQAGQGYQQDGYGAYNASQQSGYG-----QAAGY 465

Query: 350 DQQNMYLNSGGAPPGVLSTNGTDTEGTYPTAAYQVSDGQPVVNSMNGYWTYPSDLTQSLP 409
           DQQ  Y ++                 T P+     S   P  ++ +G   Y +   Q   
Sbjct: 466 DQQGGYGST-----------------TNPSQEEDASQAAPPSSAQSGQAGYGTTGQQPPA 525

Query: 410 QTGNDQSGY---YQTVSGGQEQPPVAFQPVYAQSGYPPPPGVYAQEVTLSAPAMTPTQPQ 469
           Q    Q+GY     + +G   QP  A+      SGY  PP                    
Sbjct: 526 QGSTGQAGYGAPPTSQAGYSSQPAAAY-----NSGYGAPP-------------------- 572

Query: 470 PPALPQTEAQTQPQPQPPAP-------PQPEAQTQSQPPA 474
           P + P T  Q+Q  P  P          QP A    QPPA
Sbjct: 586 PASKPPTYGQSQQSPGAPGSYGSQSGYAQPAASGYGQPPA 572

BLAST of Cp4.1LG04g08270 vs. TAIR10
Match: AT4G10070.1 (AT4G10070.1 KH domain-containing protein)

HSP 1 Score: 60.8 bits (146), Expect = 2.7e-09
Identity = 132/420 (31.43%), Postives = 170/420 (40.48%), Query Frame = 1

Query: 114 EQFVMKIPNNKVALVIGKGGETIKGIQSKSAARVQVIPLHLPPGDTSTERNVYINGLKEQ 173
           EQ  +K+PN+KV L+IG+GGETIK +Q++S AR Q+IP H   GD   ER V I+G K Q
Sbjct: 272 EQIEIKVPNDKVGLIIGRGGETIKNMQTRSGARTQLIPQH-AEGDGLKERTVRISGDKMQ 331

Query: 174 IESAKELINEVMSGKRLVNTSETTSYAQSTYPP-----PTNWSQAGQQPPLQQQQQPQYG 233
           I+ A ++I +VM+ +    +S +  Y Q  Y P     P  W   G   P      P+  
Sbjct: 332 IDIATDMIKDVMN-QNARPSSYSGGYNQPAYRPQGPGGPPQWGSRGPHAPHPYDYHPRGP 391

Query: 234 Y-APGTYPPTPGPPYYSNYPTQ--------VGSWDHANQASIQPSEQSTGYNYYGQQSQV 293
           Y + G+Y  +PG   +  YP Q           WD       Q    S  YNYYG+Q   
Sbjct: 392 YSSQGSYYNSPG---FGGYPPQHMPPRGGYGTDWD-------QRPPYSGPYNYYGRQGAQ 451

Query: 294 GSAP--------PYPGYGYGQPGSAATHGYDQT----------YSQ--QVSSYGQNYSDQ 353
            + P        P P +G G P S  ++GY Q+          YSQ     +YGQ Y   
Sbjct: 452 SAGPVPPPSGPVPSPAFG-GPPLSQVSYGYGQSHGPEYGHAAPYSQTGYQQTYGQTYEQ- 511

Query: 354 IPPYDQQNMYLNSGGAPPGVLSTNGTDTEGTYPTAAYQVSDGQPVVNSMNGYWTYPSDLT 413
            P YD      N    PP           G+YP A      GQ     M      P  + 
Sbjct: 512 -PKYDS-----NPPMQPP---------YGGSYPPA----GGGQSGYYQMQQPGVRPYGM- 571

Query: 414 QSLPQTGNDQSGYYQTVSGGQEQPPVAFQPVYAQSGYPPPPGVYAQEVTLSAPAMTPTQP 473
               Q G  Q GY      G  QP  A     A SG  P  G      +  +  M P Q 
Sbjct: 572 ----QQGPVQQGY------GPPQPAAA-----ASSGDVPYQGATPAAPSYGSTNMAP-QQ 631

Query: 474 QPPALPQTEAQTQPQPQP---PAPPQPEAQTQSQPPAPPPTEAQTQPQPPAP--PQTEAQ 495
           Q      ++   Q Q  P    APP       +Q PA  P   Q   QP +    QT AQ
Sbjct: 632 QQYGYTSSDGPVQQQTYPSYSSAPPSDAYNNGTQTPATGPAYQQQSVQPASSTYDQTGAQ 641

BLAST of Cp4.1LG04g08270 vs. TAIR10
Match: AT1G33680.1 (AT1G33680.1 KH domain-containing protein)

HSP 1 Score: 49.3 bits (116), Expect = 8.1e-06
Identity = 125/411 (30.41%), Postives = 168/411 (40.88%), Query Frame = 1

Query: 114 EQFVMKIPNNKVALVIGKGGETIKGIQSKSAARVQVIPLHLPPGDTSTERNVYINGLKEQ 173
           EQ  +K+P++KV ++IG+GGETIK +Q+KS AR+Q+IP +   GD S ER V I+G K Q
Sbjct: 320 EQMEIKVPSDKVGVIIGRGGETIKNMQTKSRARIQLIPQN--EGDASKERTVRISGDKRQ 379

Query: 174 IESAKELINEVM--SGKRLVNTSETTSYAQSTYPP-----PTNWSQAGQQPPLQQQQQPQ 233
           I+ A  LI +VM   G+    +  +  + Q  Y P     P  W   G   P        
Sbjct: 380 IDIATALIKDVMYQDGR---PSPYSGGFNQQAYQPRGPGGPPQWGSRGPHGP----HSMP 439

Query: 234 YGYAPGTYPPTPG----PPYYSNYPTQ-------VGS-WDHANQASIQPSEQSTGYNYYG 293
           Y Y  G   P+ G    PP    YP Q        GS W+       Q    S  Y+YYG
Sbjct: 440 YNYHHGGPYPSQGSHFRPPNSGGYPPQHMPPRSGYGSGWE-------QRPPHSGPYDYYG 499

Query: 294 QQSQVGSAPPYPGYGYGQPGSAATHG--YDQTYSQQVSSYGQNYSDQIPPYDQQNMYLNS 353
           +Q            G   PG   +HG  Y Q  +QQ  +YGQ Y DQ P YD   M+ + 
Sbjct: 500 RQ------------GGQNPGPVPSHGASYSQAGAQQ--TYGQMY-DQ-PHYDNPPMHQSY 559

Query: 354 GGAPPGVLSTNGTDTEGTYPTAAYQVSDGQPVVNSMNGYWTYPSDLTQSLPQTGNDQSGY 413
           GG         G   +G YP+A  Q    QP               ++     G+ + GY
Sbjct: 560 GG--------YGGSQQG-YPSAGGQHQMQQP---------------SRPYGMQGSAEQGY 619

Query: 414 YQTVSGGQEQP-----PVAFQ-PVYAQSGYPPPPGVYAQEVTLSAPAMTPTQPQPPALPQ 473
                 G  +P      V +Q P  A   Y   P   +   T +AP+   T P  P+   
Sbjct: 620 ------GPPRPAAPPGDVPYQGPTPAAPSYGSTPAAASYGSTPAAPSYGST-PAAPSYGS 667

Query: 474 TEAQTQPQPQPPAPPQPEAQTQSQPPAPPPTEAQTQPQPPAPPQTEAQTQP 498
             AQ Q      + P  +        AP      TQP   AP   +   QP
Sbjct: 680 NMAQQQQYGYASSAPTQQTYPSYSSAAPSDGYNGTQPPAVAPAYEQHGAQP 667

BLAST of Cp4.1LG04g08270 vs. NCBI nr
Match: gi|449438689|ref|XP_004137120.1| (PREDICTED: far upstream element-binding protein 1 [Cucumis sativus])

HSP 1 Score: 440.7 bits (1132), Expect = 3.6e-120
Identity = 259/368 (70.38%), Postives = 282/368 (76.63%), Query Frame = 1

Query: 106 MTSSQPGVEQFVMKIPNNKVALVIGKGGETIKGIQSKSAARVQVIPLHLPPGDTSTERNV 165
           + SSQPGVEQFVMKIPNNKVALVIGKGGETIK IQSKSAARVQ+IPLHLPPGDTSTER+V
Sbjct: 172 INSSQPGVEQFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQIIPLHLPPGDTSTERSV 231

Query: 166 YINGLKEQIESAKELINEVMSGKRLVNTSETTSYAQSTYPPPTNWSQAGQQPPLQQQQQP 225
           YINGLKEQIESAKELINEV+SGKRLV  SETTSYAQ TYP   NWSQAGQQPPL QQQQP
Sbjct: 232 YINGLKEQIESAKELINEVISGKRLV--SETTSYAQPTYPSTNNWSQAGQQPPL-QQQQP 291

Query: 226 QYGYAPGTYPPTPGPPYYSNYPTQVGSWDHANQASIQPSEQSTGYNYYGQQSQVGSAPP- 285
           QYGYA GTYPP  GPPYYS YP QV SWD +NQ+++QPS+QSTGYNYYGQQSQVGSAPP 
Sbjct: 292 QYGYAAGTYPPPQGPPYYSTYPAQVASWDQSNQSTVQPSDQSTGYNYYGQQSQVGSAPPQ 351

Query: 286 YPGYGYGQPGSAATHGYDQTYSQQVSSYGQNYSDQIPP-YDQQNMYLNSGGAPPGVLSTN 345
           +  Y YGQP S+ THGYDQ+YSQQ  SYG     QIPP YDQQNMYLNSG AP  + S+N
Sbjct: 352 FHDYSYGQPASSGTHGYDQSYSQQAPSYG-----QIPPSYDQQNMYLNSGSAPSALPSSN 411

Query: 346 GTDTEGTYPTAAYQVSDGQPVVNSMNGYWTY-PSDLTQSLPQTGNDQSGYYQTVSGGQEQ 405
           GT +EGTYPTAAYQ S          GYWTY  +D TQSLPQTGNDQSG YQTVSGG  Q
Sbjct: 412 GT-SEGTYPTAAYQAS---------TGYWTYQTTDQTQSLPQTGNDQSGSYQTVSGGHAQ 471

Query: 406 PPVAFQPVYAQSGYPPPPGVYAQEVTLSAPAMTPTQPQPPALPQTEAQTQPQPQPPAPP- 465
           P     PVY QS YPPPPGVY+         + PTQ QPP++  +E       Q  AP  
Sbjct: 472 P-----PVYGQSVYPPPPGVYSAPAPPPPEMVAPTQSQPPSVETSEDGNSNSGQNLAPTV 516

Query: 466 QPEAQTQS 470
           Q  A ++S
Sbjct: 532 QENANSES 516

BLAST of Cp4.1LG04g08270 vs. NCBI nr
Match: gi|659109837|ref|XP_008454908.1| (PREDICTED: far upstream element-binding protein 2-like [Cucumis melo])

HSP 1 Score: 439.5 bits (1129), Expect = 7.9e-120
Identity = 266/376 (70.74%), Postives = 282/376 (75.00%), Query Frame = 1

Query: 106 MTSSQPGVEQFVMKIPNNKVALVIGKGGETIKGIQSKSAARVQVIPLHLPPGDTSTERNV 165
           M SSQPGVEQFVMKIPNNKVALVIGKGGETIK IQSKSAARVQ+IPLHLPPGDTSTER+V
Sbjct: 133 MNSSQPGVEQFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQIIPLHLPPGDTSTERSV 192

Query: 166 YINGLKEQIESAKELINEVMSGKRLVNTSETTSYAQSTYPPPTNWSQAGQQPPLQQQQQP 225
           YINGLKEQIESAKELINEV+SGKRLV  SET SYAQ TYP   NWSQAGQQPPL QQQQP
Sbjct: 193 YINGLKEQIESAKELINEVISGKRLV--SETNSYAQPTYPSTNNWSQAGQQPPL-QQQQP 252

Query: 226 QYGYAPGTYPPTPGPPYYSNY-PTQVGSWDHANQASIQPSEQSTGYNYYGQQSQVGSA-P 285
           QYGYAPGTYPP PGP YYS Y PTQV SWD +NQ+++QPS+QSTGYNYYGQQSQVGSA P
Sbjct: 253 QYGYAPGTYPPPPGPQYYSTYPPTQVASWDQSNQSTMQPSDQSTGYNYYGQQSQVGSAPP 312

Query: 286 PYPGYGYGQPGSAATHGYDQTYSQQVSSYGQNYSDQIPP-YDQQNMYLNSGGAPPGVLST 345
           PY  Y YGQP S+ THGYDQ+YSQQ  SYG     QIPP YDQQNMYLNSG APP + ST
Sbjct: 313 PYQDYSYGQPASSGTHGYDQSYSQQAPSYG-----QIPPSYDQQNMYLNSGSAPPALPST 372

Query: 346 NGTDTEGTYPTAAYQVSDGQPVVNSMNGYWTYPSDLTQSLPQTGNDQSGYYQTVSGGQEQ 405
           NGT +EGTYPTAAYQ S          GYWTY +D TQSLPQTGNDQSG YQTVSGG  Q
Sbjct: 373 NGT-SEGTYPTAAYQAS---------TGYWTYQTDPTQSLPQTGNDQSGSYQTVSGGHAQ 432

Query: 406 PPVAFQPVYAQSGYPPPPGVYAQEVTLSAPAMTPTQPQPPALPQTEAQTQPQPQPPAPPQ 465
           P     PVY QS YPPPPGVY      SAPA       PP  P+T A  Q QP P     
Sbjct: 433 P-----PVYGQSVYPPPPGVY------SAPA-------PP--PETVAPIQSQPPPSVETS 470

Query: 466 PEAQTQSQPPAPPPTE 479
            +    S     P  +
Sbjct: 493 EDGNLNSGQNLAPTVQ 470

BLAST of Cp4.1LG04g08270 vs. NCBI nr
Match: gi|645262139|ref|XP_008236628.1| (PREDICTED: far upstream element-binding protein 1-like [Prunus mume])

HSP 1 Score: 325.9 bits (834), Expect = 1.3e-85
Identity = 200/363 (55.10%), Postives = 228/363 (62.81%), Query Frame = 1

Query: 101 PST-PGMTSSQPGVEQFVMKIPNNKVALVIGKGGETIKGIQSKSAARVQVIPLHLPPGDT 160
           PST  G  S QPG EQFVMK+PNNKVAL+IGKGGETI+ +QSKS AR+QV+PLHLPPGD 
Sbjct: 168 PSTNQGFNSIQPGTEQFVMKVPNNKVALIIGKGGETIRNMQSKSGARIQVVPLHLPPGDM 227

Query: 161 STERNVYINGLKEQIESAKELINEVMSGKRLVNTSETTSYAQSTYPPPTNWSQAGQQPPL 220
           S ER+VYING+ EQIE+AKEL+NEV+SGKRLVNTS T SY Q +Y PP NW+  GQ P  
Sbjct: 228 SAERSVYINGVTEQIEAAKELVNEVISGKRLVNTSGTNSYMQQSYAPPGNWAPPGQAP-- 287

Query: 221 QQQQQPQYGYA-PGTYPPTPGPPYYSNYPTQVGSWDHANQA-SIQPSEQSTGYNYYGQQS 280
            QQQQP YGY  PG+Y P     YY NYPTQV  WD +NQ  S QP ++S+ YNYYGQQ 
Sbjct: 288 IQQQQPHYGYTQPGSYAPPAS--YYGNYPTQVAGWDQSNQVPSSQPPQESSAYNYYGQQP 347

Query: 281 QVGSAPPYPGYGYGQPGSAATHGYDQTYSQQVSSYGQNYSDQIPPYDQQNMYLNSGGAPP 340
            +G APP P Y Y Q    A+HGYDQ Y+QQ  SYGQN S Q P  DQQ  Y  SG  PP
Sbjct: 348 PMGPAPPNPSYNYNQTPPVASHGYDQGYAQQPPSYGQNISSQAPGSDQQQQYATSGYGPP 407

Query: 341 GVLST--NGTDTEGTYPTAAYQVSDGQPVVNSMNGYWTYPSDLTQSLPQTGNDQSGYYQT 400
            V S+      ++ T P+AAY V   QP  NS  GYW          P T   Q+GYYQT
Sbjct: 408 AVPSSVDGSASSQSTQPSAAYPVPYSQPPANSQAGYWQ---------PHT---QTGYYQT 467

Query: 401 VSGGQ---EQPPVAFQ-PVYAQSGYP-PPPGVYAQEVTLSAPAMTPTQPQPPALPQTEAQ 454
             GGQ   E P  A Q  VY Q GYP P P  Y Q V       +  QPQ  + P T   
Sbjct: 468 NYGGQQAVEDPSAASQSAVYGQGGYPQPDPSHYGQAVNPPVNGESQHQPQHQSQPPTNGY 514

BLAST of Cp4.1LG04g08270 vs. NCBI nr
Match: gi|595796733|ref|XP_007201191.1| (hypothetical protein PRUPE_ppa002757mg [Prunus persica])

HSP 1 Score: 325.5 bits (833), Expect = 1.7e-85
Identity = 193/337 (57.27%), Postives = 220/337 (65.28%), Query Frame = 1

Query: 101 PST-PGMTSSQPGVEQFVMKIPNNKVALVIGKGGETIKGIQSKSAARVQVIPLHLPPGDT 160
           PST  G  S QPG EQFVMK+PNNKVAL+IGKGGETI+ +QSKS AR+QV+PLHLPPGD 
Sbjct: 168 PSTNQGFNSIQPGTEQFVMKVPNNKVALIIGKGGETIRNMQSKSGARIQVVPLHLPPGDM 227

Query: 161 STERNVYINGLKEQIESAKELINEVMSGKRLVNTSETTSYAQSTYPPPTNWSQAGQQPPL 220
           S ER+VYING+ EQIE+AKEL+NEV+SGKRLVNTS T SY Q +Y PP NW+  GQ P  
Sbjct: 228 SAERSVYINGVTEQIEAAKELVNEVISGKRLVNTSGTNSYMQQSYAPPGNWAPPGQAP-- 287

Query: 221 QQQQQPQYGYA-PGTYPPTPGPPYYSNYPTQVGSWDHANQA-SIQPSEQSTGYNYYGQQS 280
            QQQQP YGY  PG+Y P     YY NYPTQ   WD +NQ  S QP ++S+ YNYYGQQ 
Sbjct: 288 IQQQQPHYGYTQPGSYAPPAS--YYGNYPTQGAGWDQSNQVPSSQPPQESSAYNYYGQQP 347

Query: 281 QVGSAPPYPGYGYGQPGSAATHGYDQTYSQQVSSYGQNYSDQIPPYDQQNMYLNSGGAPP 340
            +GSAPP P Y Y Q    A+HGYDQ Y+QQ  SYGQN S Q P  DQQ  Y  SG  PP
Sbjct: 348 PMGSAPPNPSYNYNQTPPVASHGYDQGYAQQPPSYGQNISSQAPGSDQQQQYATSGYGPP 407

Query: 341 GVLST--NGTDTEGTYPTAAYQVSDGQPVVNSMNGYWTYPSDLTQSLPQTGNDQSGYYQT 400
            V S+      ++ T P+AAY V   QP  NS  GYW          P T   Q+GYYQT
Sbjct: 408 AVPSSVDGSASSQSTQPSAAYPVPYSQPPANSQAGYWQ---------PHT---QTGYYQT 467

Query: 401 VSGGQ---EQPPVAFQ-PVYAQSGYP-PPPGVYAQEV 428
             GGQ   E P  A Q  VY Q GYP P P  Y + V
Sbjct: 468 SYGGQQAVEDPSAASQSAVYGQGGYPQPDPSHYGEAV 488

BLAST of Cp4.1LG04g08270 vs. NCBI nr
Match: gi|703097621|ref|XP_010096164.1| (Far upstream element-binding protein 2 [Morus notabilis])

HSP 1 Score: 292.4 bits (747), Expect = 1.6e-75
Identity = 186/357 (52.10%), Postives = 226/357 (63.31%), Query Frame = 1

Query: 110 QPGVEQFVMKIPNNKVALVIGKGGETIKGIQSKSAARVQVIPLHLPPGDTSTERNVYING 169
           QPG EQFVMK+PNNKVAL+IGKGGETI+ +QS+S AR+Q++PLHLPPGDTSTER VYI+G
Sbjct: 187 QPGAEQFVMKVPNNKVALLIGKGGETIRNMQSRSGARMQIVPLHLPPGDTSTERTVYIDG 246

Query: 170 LKEQIESAKELINEVMSGKRLVNTSETTSYAQSTYPPPTNWSQAGQQPPLQQQQQPQYGY 229
           LKEQIESAKELINEV+SGKRLVN S   SY Q  Y    NW   GQ P    QQQPQYGY
Sbjct: 247 LKEQIESAKELINEVLSGKRLVNPSGANSYMQPAYAGAANWGAPGQPP---MQQQPQYGY 306

Query: 230 A-PGTY-PPTPGPPYYSNYPTQVGSWDHANQAS-IQPSEQSTGYNYYGQQSQVGSAPPYP 289
             PG+Y  P P   YYSN+PT V +WD ++QA+  Q  +QSTGY+YYGQQ+QVG AP  P
Sbjct: 307 TQPGSYGQPPPPASYYSNHPTSVAAWDPSHQATHSQQPQQSTGYDYYGQQTQVGLAPSNP 366

Query: 290 GYGYGQPGSAATHGYDQTYSQQVSSYGQNYSDQIPPYDQQNMYLNSG-GAPPGVLSTNGT 349
            Y Y Q    A+H Y Q+YSQQ S+YGQ  S Q+P  +Q N Y++S  GAPP   + +GT
Sbjct: 367 SYSYNQT-LPASHSYGQSYSQQPSNYGQPISSQVPVPNQPNPYVSSEYGAPPPSSNLDGT 426

Query: 350 -DTEGTYPTAAYQVSDGQPVVNSMNGYWTYPSDLTQSLPQTGNDQSGYYQTVSGGQEQ-- 409
             ++   P +AY  +  Q + NS  GYW Y S  +Q   Q   DQ+GYYQT+ G Q+   
Sbjct: 427 SSSQAMQPASAYPYAHSQTIDNSHAGYWAYSSSTSQPPAQPFYDQTGYYQTMYGSQQAQV 486

Query: 410 PPVAFQPVYAQSGYPPPPGVYAQEVTLSAPAMTPT---QPQPPALPQTEAQTQPQPQ 457
           P       Y + GYP            S  A  PT   Q   PA    + + QPQ Q
Sbjct: 487 PSAVPHSGYGEDGYP------------SQSASAPTDYDQATNPAQGGQQLEQQPQEQ 527

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
FUBP3_HUMAN7.4e-0930.77Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3 PE=1 SV=2[more]
Match NameE-valueIdentityDescription
A0A0A0K828_CUCSA2.5e-12070.38RNA-binding protein Nova-1 OS=Cucumis sativus GN=Csa_7G074890 PE=4 SV=1[more]
M5W6H0_PRUPE1.2e-8557.27Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002757mg PE=4 SV=1[more]
W9RBH1_9ROSA1.1e-7552.10Far upstream element-binding protein 2 OS=Morus notabilis GN=L484_026897 PE=4 SV... [more]
B9S767_RICCO3.5e-6647.50RNA-binding protein Nova-1, putative OS=Ricinus communis GN=RCOM_0774000 PE=4 SV... [more]
A0A0K9R6D1_SPIOL1.2e-6147.79Uncharacterized protein OS=Spinacia oleracea GN=SOVF_101630 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G25970.11.2e-3336.75 KH domain-containing protein[more]
AT4G10070.12.7e-0931.43 KH domain-containing protein[more]
AT1G33680.18.1e-0630.41 KH domain-containing protein[more]
Match NameE-valueIdentityDescription
gi|449438689|ref|XP_004137120.1|3.6e-12070.38PREDICTED: far upstream element-binding protein 1 [Cucumis sativus][more]
gi|659109837|ref|XP_008454908.1|7.9e-12070.74PREDICTED: far upstream element-binding protein 2-like [Cucumis melo][more]
gi|645262139|ref|XP_008236628.1|1.3e-8555.10PREDICTED: far upstream element-binding protein 1-like [Prunus mume][more]
gi|595796733|ref|XP_007201191.1|1.7e-8557.27hypothetical protein PRUPE_ppa002757mg [Prunus persica][more]
gi|703097621|ref|XP_010096164.1|1.6e-7552.10Far upstream element-binding protein 2 [Morus notabilis][more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR004088KH_dom_type_1
IPR004087KH_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g08270.1Cp4.1LG04g08270.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 112..186
score: 3.1
IPR004088K Homology domain, type 1GENE3DG3DSA:3.30.1370.10coord: 114..186
score: 6.2
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 117..183
score: 5.2
IPR004088K Homology domain, type 1PROFILEPS50084KH_TYPE_1coord: 113..181
score: 15
IPR004088K Homology domain, type 1unknownSSF54791Eukaryotic type KH-domain (KH-domain type I)coord: 103..187
score: 2.19
NoneNo IPR availableunknownCoilCoilcoord: 16..36
score: -coord: 167..187
scor
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 110..248
score: 5.9E-44coord: 29..41
score: 5.9E-44coord: 487..500
score: 5.9
NoneNo IPR availablePANTHERPTHR10288:SF171F17H15.1/F17H15.1-RELATEDcoord: 487..500
score: 5.9E-44coord: 110..248
score: 5.9E-44coord: 29..41
score: 5.9

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG04g08270Cp4.1LG15g05080Cucurbita pepo (Zucchini)cpecpeB269
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g08270Cucumber (Gy14) v2cgybcpeB237
Cp4.1LG04g08270Melon (DHL92) v3.6.1cpemedB746
Cp4.1LG04g08270Cucumber (Chinese Long) v3cpecucB0835
Cp4.1LG04g08270Wax gourdcpewgoB0864
Cp4.1LG04g08270Cucurbita pepo (Zucchini)cpecpeB500
Cp4.1LG04g08270Wild cucumber (PI 183967)cpecpiB671
Cp4.1LG04g08270Cucumber (Chinese Long) v2cpecuB668
Cp4.1LG04g08270Bottle gourd (USVL1VR-Ls)cpelsiB525