Cp4.1LG04g08270 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTGTGCTCGTCGAACTCCAAAGCCCTATCACCGCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCCCACTCCCACTCTCACTCCCACCGCCATGAAAGACCACCAAGATACCCAAGAGCTTCACCCCGACACTAACAAGCGCAAGCTCGAACAGAACATTCAATTGGCTAAGCAGAAAGCTCAGGAAATCGTTGCTAAGCTTGTGAGCAATGCCGAGTCTAAACGCCCTCGCTTTGACTACGAACCCCCCTCTGCTTCCCCCGCCTCTCAAAATCCACTGTCATCCGCTTCCCCCTTTCCTGGTAAGCATGTTCAATTTCTTCGACTCCTTTTTCTTTTCTTCTTTTTAATTTAGGTAAAGTGGATGTTCTGCTTCTCTATTTTTATGCTTTGGAGTTTGTTCGAACATGTGTGGAATTGTTACGGATTCTTGCGACACGAGTCTTTAATGATTCATTTGTGGTTGGATTTTTGGCTATGTTGTTAGCATAGAAATACGCCGATGTTGGATACGTGGATAAACAATCTTCTTGTCCATTACTCTGATTTTGTTCTAGCTTTTAAGATTTTGCGCTTCTCTGATATTTTATTGTCAAGTTTGTTAAATTTTGTCCACCTATATTTTTTAGACAAGGGGAACTGGAGTGGGCCTTTATGGAGCCTTTTAGGGCTTTGGGAGGAGTCATAGCAAAAGGGTAATCTCTGCTATCGAAATTTTGGAGAAGCCTTCTCGCGGTCTATCGAATTTTAATTTAAAGATGAGTCTTCTTTGTGGGGTGACATCAATCTTTCGGCCACCTTATCCAAGGGGTTCGGGAAAGAATTTTGGAGAGAATTATGCCGTTTCTACCCATTAGAACCCAATGATATAGACATACTTCTTTATGTAGGTTTCCTCCCTGTTGATATCATATCTGGCAATGGGGATGTCGATGCAAATGAAAATCTCCCATTGTCGAAACTTGTAGCTTGATGCAAATGAAAATCTCCCTTTCACATTTAACAACAAGTAGCTCCACGTTTATACAACTCCACCTCTAGCTATGGTATCATTTGGATCAATCTTGCTTAAGTTTTGTGGTCATTGCAAGCATTTGTGGGAGAGATTCGAGAGAAGACAGGTTGGTACACAAAATACAGCTGAATTGACAGTGGAAGACCCCTTGGGTGATCTATTACGAAACTAAGGAGTCACTTGGGAGGTTTCAAATTGACAGTGGAAGACCTCCCTTGTGGTCTTTAATGTAGCTAAGGAGTCACTGGGGAAGGTTTTCCATTGTTAAAATTGGGAAGAAAAGACCTTTATGGATGATAGATTGGATAGATTATTTCCCCTTGATGTATGCTATTAGTAACAAGAAGGAAAAGAAAAGGGTTGTATGCAATGTGTTGGATGGTGAGACTCCTTTGTGGAGCATCACTGCTAGAAGGAACTTGTTAGAGGCAGAGATGGAAGATTTTGAGGCTTTGGTTGCAGAATATGAAACTTTTAGACATCAGAGAACTTCTGGCTGAGGTCCTTGTTGCAAATCCTGATTACAAATAGTTTTCTTCTTCCAATAGCACTCGCTCTTGCAATAAAGAAGGATAACAACCCCGAAAAAGTGAATTTTTTGTGTGGACCCTTTGTTTGGGGGAGTATTAATCCTGGAAATAGATCAAAGGAGATGGCCTTCGTTTTCTGTCCTTCAATTCAATCTAGTGCAATTTGTGTTTAAATACAAAGGAGAGTTGAAATCACGTCCTCTTCACAGCCAATTAAGGAGTTAATGAAACTTCATCTGTCAGAGCTTCAATCTACAATGGTGCTTCCACTCAACTACAAAGGAGAACACTTCCCAATTGCCTTTGGGCTACAGTAAAAAAGAAGGCAAAGATCCTCCTCGACATTATTGATATAGGCTTATGGGATTTTTAAAGAGAGAGAAATGACTGTGTTCAATGACAAGATTAGAGGGTGGGTAGAGGTGATAGAGCTAGGGAAGGGAAGTTTCTGTCATTCAACTACACCTTCATGTAATTTTTCCCCAATTGAAGTCTTTAATAGTTACCAGTACCACCTTTATGTAATTAATGGGAATTGGGAATCTTTTTGTAGTAATTAGAGGGTAGTTTAGGCTAGAAATTTCTGTTTCTTTTAGTTGATAACAAAAGGAGAGTTTTAAAAAAATATTGTAATAGACACTTCAATTTGAGGCTGTGTATTATACAATTCACATTGACAATCTTTCTTTTTTTCCCCTTCTCTTCTTTGTTTGTTTATTTATTATAATGGATTGTGTAACTCTTCTTTATAAAGAACTAATTGTATTAGTTTCGAGGTATGATTATGATGTAGTCTTAATTCTATATTCAATTGCCTGTTACTTGAGATTCTTTTTCAGCACATTTAGTATGCTTACTAATCACGAAGTAGACATTCCTTTATTTTTATACTCAAACACTGTCGTGTCATGTGTCACTTCTTGCATTCGATTTTTCAACATGCATTGGCAACTTTGAGATTCACTTTTCTGTAAATACTAAGCATGTAGTTATATTTCTATTGAAAAGAAGCACAAATTTCCAATTCCAGATTTTGCTAACTTTCAAGTTGTTCAGTTTCTTCTGGTACTCAAACAGGTCCATACCATGGTTTTCAAAGCACGAGTAAGAAAATAAATATTCCAAATATTAAGGTACTTGGTTGCCATCTTGTCTGTTAGATTACCATTTGCCTACTGCTGTCAAAGCTGATTTTTTCTTTTCAAATCCTTTTGTAGGTTGGGTTGATTATTGGGAAAGGTGGAGAAACCATCAAATACCTTCAACTCCAGTCAGGGGCTAAAATTCAGATCACCAGAGATTTCGAAGCTGATCCTCAATCTTTGACAAGAGATGTGGAATTAATGGGCACTTCAGAACAAGTTAGCAGGGCAGAACAGCTTATCAATGAAGTAATGGCAGAGGTGAAGCGCTGATTAAAATGCTTTATCATTGTCAACTCTTGTATGTTGGAGATGTGAAGCTATTTAGACACCTTAATGTAACAGGCAGATTCAGGAGCTTCTCCTGCAACCACAAATCAGGGAATGACCTCAAGTCAACCTGGAGTTGAGCAGTTCGTAATGAAGATTCCTAACAATAAGGTAATTTCTTTTAATGTGTTTTATCCATCCTTTAAGGTTAATCTAATATTATGATAAGAATGTTGTTATAGGTTGCACTTGTCATTGGAAAGGGAGGCGAGACTATAAAGGGCATACAGAGCAAGTCAGCAGCTCGTGTTCAGGTATGTAATTTGTGGGAATTAGAGTCTATTGAACCATTGCCATTGCAATTATTGCAGTTCAAGAACAGCTTAGAGTTTCTAAAATTAGCAAGCACAGTAACATTACTGCTTGACCCTGTTTTGTTAGATTTGTAACTTTGAATTGTCAGACTCAGAAAGTTTACTAGAAAAGTATACTTCAAATAAAAAATTCTCCATTTCATCATTCGTACATCTTAGGATGCATTTGGTTGATGATCCTACAAGAATTTGAAACAAAGATTCACAGCCTGTTATTTTTAGATACGTGTTTGATAATGGATTTAAAATATTGAAAATATGCAAGGTTGTTTTCAAAATTTTCACATTTTAATCTAAACATTGTCCGGTAATGCTGTTTATCATCTTCTTGTATGGACTCTCACCCTTCAGGTTATCCCTTTGCACCTTCCTCCCGGCGATACATCGACAGAGAGAAATGTTTATATTAATGGGCTGAAGGAGCAGATTGAGTCAGCTAAAGAATTGATTAATGAAGTAATGAGTGGGGTGAGTCATCAACTCCCTTTATTGCCTTTCAAACTTCTCCTCACCTATGTCCCCGATTTTCTCTGGCTCTACTAATTTTCTGCTGAGATTTCTGTGGTTTATCTATCTGGTATATTATCACGTGCATGAAAATCCGAAGTATTGAAAGGCAATATTTTCTATGATGGTTTTATGAAGGCTCGGTTTGAAATGACTTTTCTAGTGGTTAAAAACACTTTTTAAACTTTAAAACCATTTTTTAAGCACTTTGAAAGTCATTCTTAATAGGCTCGTAGTTTTCTTGGCTTGTGTTTTTGAACATTAGGCTCTTGTATGGTAGCTGAAGTTCAACTGCACATCATTTCAACTATCTTTCAATAGGAACGTTTAAAATTTCATTCATTTTTTAAGAGATTGACATGAGCTTTGATAGACTGCTGGAATTTGAATGTTATTATCTCTGAGACATAAATGCCCCCCTTTCTGCAGAAACGTCTGGTGAATACATCTGAAACTACTAGCTATGCCCAATCAACTTACCCTCCTCCTACCAATTGGTCTCAAGCTGGACAACAACCTCCCTTGCAGCAACAGCAACAACCCCAATATGGATATGCGCCAGGAACCTATCCTCCAACCCCAGGGCCTCCGTATTATAGTAACTATCCAACTCAAGTAGGAAGCTGGGATCATGCGAACCAAGCAAGTATTCAGCCATCAGAACAAAGTACAGGATATAATTACTATGGACAACAGTCTCAGGTTGGGTCAGCTCCTCCATATCCTGGCTATGGTTATGGTCAGCCAGGTTCAGCCGCCACTCATGGTTATGATCAGACCTACTCCCAACAGGTATCGAGTTATGGGCAAAACTACTCGGACCAAATTCCACCTTACGATCAGCAGAACATGTACCTTAACTCAGGAGGTGCACCACCTGGTGTGCTATCAACAAATGGAACCGACACTGAAGGTACATATCCGACTGCAGCATACCAAGTTTCAGACGGCCAGCCAGTTGTCAACTCTATGAACGGTTACTGGACGTACCCAAGCGACCTGACCCAATCACTTCCTCAGACAGGGAATGACCAGTCTGGTTATTATCAAACAGTAAGCGGGGGACAGGAGCAGCCTCCTGTCGCTTTTCAACCTGTCTACGCACAGAGTGGGTACCCTCCTCCACCAGGCGTGTATGCTCAGGAAGTAACCCTCTCGGCCCCGGCTATGACTCCTACCCAACCACAACCACCAGCTCTTCCACAGACAGAGGCTCAAACCCAACCACAACCACAACCACCTGCTCCTCCACAGCCAGAGGCTCAAACCCAATCACAACCACCAGCTCCTCCACCGACAGAGGCTCAAACCCAGCCACAACCGCCAGCTCCTCCACAGACGGAGGCTCAAACCCAACCAGAACCACCGTCACATGAACTGAGT TTTGTGCTCGTCGAACTCCAAAGCCCTATCACCGCTTCTTCTTCTTCTTCTTCTTCTTCCTCCTCCCCACTCCCACTCTCACTCCCACCGCCATGAAAGACCACCAAGATACCCAAGAGCTTCACCCCGACACTAACAAGCGCAAGCTCGAACAGAACATTCAATTGGCTAAGCAGAAAGCTCAGGAAATCGTTGCTAAGCTTGTGAGCAATGCCGAGTCTAAACGCCCTCGCTTTGACTACGAACCCCCCTCTGCTTCCCCCGCCTCTCAAAATCCACTGTCATCCGCTTCCCCCTTTCCTGTTTCTTCTGGTACTCAAACAGGTCCATACCATGGTTTTCAAAGCACGAGTTGGGTTGATTATTGGGAAAGGTGGAGAAACCATCAAATACCTTCAACTCCAGGAATGACCTCAAGTCAACCTGGAGTTGAGCAGTTCGTAATGAAGATTCCTAACAATAAGGTTGCACTTGTCATTGGAAAGGGAGGCGAGACTATAAAGGGCATACAGAGCAAGTCAGCAGCTCGTGTTCAGGTTATCCCTTTGCACCTTCCTCCCGGCGATACATCGACAGAGAGAAATGTTTATATTAATGGGCTGAAGGAGCAGATTGAGTCAGCTAAAGAATTGATTAATGAAGTAATGAGTGGGAAACGTCTGGTGAATACATCTGAAACTACTAGCTATGCCCAATCAACTTACCCTCCTCCTACCAATTGGTCTCAAGCTGGACAACAACCTCCCTTGCAGCAACAGCAACAACCCCAATATGGATATGCGCCAGGAACCTATCCTCCAACCCCAGGGCCTCCGTATTATAGTAACTATCCAACTCAAGTAGGAAGCTGGGATCATGCGAACCAAGCAAGTATTCAGCCATCAGAACAAAGTACAGGATATAATTACTATGGACAACAGTCTCAGGTTGGGTCAGCTCCTCCATATCCTGGCTATGGTTATGGTCAGCCAGGTTCAGCCGCCACTCATGGTTATGATCAGACCTACTCCCAACAGGTATCGAGTTATGGGCAAAACTACTCGGACCAAATTCCACCTTACGATCAGCAGAACATGTACCTTAACTCAGGAGGTGCACCACCTGGTGTGCTATCAACAAATGGAACCGACACTGAAGGTACATATCCGACTGCAGCATACCAAGTTTCAGACGGCCAGCCAGTTGTCAACTCTATGAACGGTTACTGGACGTACCCAAGCGACCTGACCCAATCACTTCCTCAGACAGGGAATGACCAGTCTGGTTATTATCAAACAGTAAGCGGGGGACAGGAGCAGCCTCCTGTCGCTTTTCAACCTGTCTACGCACAGAGTGGGTACCCTCCTCCACCAGGCGTGTATGCTCAGGAAGTAACCCTCTCGGCCCCGGCTATGACTCCTACCCAACCACAACCACCAGCTCTTCCACAGACAGAGGCTCAAACCCAACCACAACCACAACCACCTGCTCCTCCACAGCCAGAGGCTCAAACCCAATCACAACCACCAGCTCCTCCACCGACAGAGGCTCAAACCCAGCCACAACCGCCAGCTCCTCCACAGACGGAGGCTCAAACCCAACCAGAACCACCGTCACATGAACTGAGT ATGAAAGACCACCAAGATACCCAAGAGCTTCACCCCGACACTAACAAGCGCAAGCTCGAACAGAACATTCAATTGGCTAAGCAGAAAGCTCAGGAAATCGTTGCTAAGCTTGTGAGCAATGCCGAGTCTAAACGCCCTCGCTTTGACTACGAACCCCCCTCTGCTTCCCCCGCCTCTCAAAATCCACTGTCATCCGCTTCCCCCTTTCCTGTTTCTTCTGGTACTCAAACAGGTCCATACCATGGTTTTCAAAGCACGAGTTGGGTTGATTATTGGGAAAGGTGGAGAAACCATCAAATACCTTCAACTCCAGGAATGACCTCAAGTCAACCTGGAGTTGAGCAGTTCGTAATGAAGATTCCTAACAATAAGGTTGCACTTGTCATTGGAAAGGGAGGCGAGACTATAAAGGGCATACAGAGCAAGTCAGCAGCTCGTGTTCAGGTTATCCCTTTGCACCTTCCTCCCGGCGATACATCGACAGAGAGAAATGTTTATATTAATGGGCTGAAGGAGCAGATTGAGTCAGCTAAAGAATTGATTAATGAAGTAATGAGTGGGAAACGTCTGGTGAATACATCTGAAACTACTAGCTATGCCCAATCAACTTACCCTCCTCCTACCAATTGGTCTCAAGCTGGACAACAACCTCCCTTGCAGCAACAGCAACAACCCCAATATGGATATGCGCCAGGAACCTATCCTCCAACCCCAGGGCCTCCGTATTATAGTAACTATCCAACTCAAGTAGGAAGCTGGGATCATGCGAACCAAGCAAGTATTCAGCCATCAGAACAAAGTACAGGATATAATTACTATGGACAACAGTCTCAGGTTGGGTCAGCTCCTCCATATCCTGGCTATGGTTATGGTCAGCCAGGTTCAGCCGCCACTCATGGTTATGATCAGACCTACTCCCAACAGGTATCGAGTTATGGGCAAAACTACTCGGACCAAATTCCACCTTACGATCAGCAGAACATGTACCTTAACTCAGGAGGTGCACCACCTGGTGTGCTATCAACAAATGGAACCGACACTGAAGGTACATATCCGACTGCAGCATACCAAGTTTCAGACGGCCAGCCAGTTGTCAACTCTATGAACGGTTACTGGACGTACCCAAGCGACCTGACCCAATCACTTCCTCAGACAGGGAATGACCAGTCTGGTTATTATCAAACAGTAAGCGGGGGACAGGAGCAGCCTCCTGTCGCTTTTCAACCTGTCTACGCACAGAGTGGGTACCCTCCTCCACCAGGCGTGTATGCTCAGGAAGTAACCCTCTCGGCCCCGGCTATGACTCCTACCCAACCACAACCACCAGCTCTTCCACAGACAGAGGCTCAAACCCAACCACAACCACAACCACCTGCTCCTCCACAGCCAGAGGCTCAAACCCAATCACAACCACCAGCTCCTCCACCGACAGAGGCTCAAACCCAGCCACAACCGCCAGCTCCTCCACAGACGGAGGCTCAAACCCAACCAGAACCACCGTCACATGAACTGAGT MKDHQDTQELHPDTNKRKLEQNIQLAKQKAQEIVAKLVSNAESKRPRFDYEPPSASPASQNPLSSASPFPVSSGTQTGPYHGFQSTSWVDYWERWRNHQIPSTPGMTSSQPGVEQFVMKIPNNKVALVIGKGGETIKGIQSKSAARVQVIPLHLPPGDTSTERNVYINGLKEQIESAKELINEVMSGKRLVNTSETTSYAQSTYPPPTNWSQAGQQPPLQQQQQPQYGYAPGTYPPTPGPPYYSNYPTQVGSWDHANQASIQPSEQSTGYNYYGQQSQVGSAPPYPGYGYGQPGSAATHGYDQTYSQQVSSYGQNYSDQIPPYDQQNMYLNSGGAPPGVLSTNGTDTEGTYPTAAYQVSDGQPVVNSMNGYWTYPSDLTQSLPQTGNDQSGYYQTVSGGQEQPPVAFQPVYAQSGYPPPPGVYAQEVTLSAPAMTPTQPQPPALPQTEAQTQPQPQPPAPPQPEAQTQSQPPAPPPTEAQTQPQPPAPPQTEAQTQPEPPSHELS
BLAST of Cp4.1LG04g08270 vs. Swiss-Prot
Match: FUBP3_HUMAN (Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3 PE=1 SV=2) HSP 1 Score: 63.5 bits (153), Expect = 7.4e-09 Identity = 68/221 (30.77%), Postives = 93/221 (42.08%), Query Frame = 1
BLAST of Cp4.1LG04g08270 vs. TrEMBL
Match: A0A0A0K828_CUCSA (RNA-binding protein Nova-1 OS=Cucumis sativus GN=Csa_7G074890 PE=4 SV=1) HSP 1 Score: 440.7 bits (1132), Expect = 2.5e-120 Identity = 259/368 (70.38%), Postives = 282/368 (76.63%), Query Frame = 1
BLAST of Cp4.1LG04g08270 vs. TrEMBL
Match: M5W6H0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002757mg PE=4 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 1.2e-85 Identity = 193/337 (57.27%), Postives = 220/337 (65.28%), Query Frame = 1
BLAST of Cp4.1LG04g08270 vs. TrEMBL
Match: W9RBH1_9ROSA (Far upstream element-binding protein 2 OS=Morus notabilis GN=L484_026897 PE=4 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 1.1e-75 Identity = 186/357 (52.10%), Postives = 226/357 (63.31%), Query Frame = 1
BLAST of Cp4.1LG04g08270 vs. TrEMBL
Match: B9S767_RICCO (RNA-binding protein Nova-1, putative OS=Ricinus communis GN=RCOM_0774000 PE=4 SV=1) HSP 1 Score: 260.8 bits (665), Expect = 3.5e-66 Identity = 171/360 (47.50%), Postives = 211/360 (58.61%), Query Frame = 1
BLAST of Cp4.1LG04g08270 vs. TrEMBL
Match: A0A0K9R6D1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_101630 PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61 Identity = 173/362 (47.79%), Postives = 203/362 (56.08%), Query Frame = 1
BLAST of Cp4.1LG04g08270 vs. TAIR10
Match: AT2G25970.1 (AT2G25970.1 KH domain-containing protein) HSP 1 Score: 141.7 bits (356), Expect = 1.2e-33 Identity = 147/400 (36.75%), Postives = 189/400 (47.25%), Query Frame = 1
BLAST of Cp4.1LG04g08270 vs. TAIR10
Match: AT4G10070.1 (AT4G10070.1 KH domain-containing protein) HSP 1 Score: 60.8 bits (146), Expect = 2.7e-09 Identity = 132/420 (31.43%), Postives = 170/420 (40.48%), Query Frame = 1
BLAST of Cp4.1LG04g08270 vs. TAIR10
Match: AT1G33680.1 (AT1G33680.1 KH domain-containing protein) HSP 1 Score: 49.3 bits (116), Expect = 8.1e-06 Identity = 125/411 (30.41%), Postives = 168/411 (40.88%), Query Frame = 1
BLAST of Cp4.1LG04g08270 vs. NCBI nr
Match: gi|449438689|ref|XP_004137120.1| (PREDICTED: far upstream element-binding protein 1 [Cucumis sativus]) HSP 1 Score: 440.7 bits (1132), Expect = 3.6e-120 Identity = 259/368 (70.38%), Postives = 282/368 (76.63%), Query Frame = 1
BLAST of Cp4.1LG04g08270 vs. NCBI nr
Match: gi|659109837|ref|XP_008454908.1| (PREDICTED: far upstream element-binding protein 2-like [Cucumis melo]) HSP 1 Score: 439.5 bits (1129), Expect = 7.9e-120 Identity = 266/376 (70.74%), Postives = 282/376 (75.00%), Query Frame = 1
BLAST of Cp4.1LG04g08270 vs. NCBI nr
Match: gi|645262139|ref|XP_008236628.1| (PREDICTED: far upstream element-binding protein 1-like [Prunus mume]) HSP 1 Score: 325.9 bits (834), Expect = 1.3e-85 Identity = 200/363 (55.10%), Postives = 228/363 (62.81%), Query Frame = 1
BLAST of Cp4.1LG04g08270 vs. NCBI nr
Match: gi|595796733|ref|XP_007201191.1| (hypothetical protein PRUPE_ppa002757mg [Prunus persica]) HSP 1 Score: 325.5 bits (833), Expect = 1.7e-85 Identity = 193/337 (57.27%), Postives = 220/337 (65.28%), Query Frame = 1
BLAST of Cp4.1LG04g08270 vs. NCBI nr
Match: gi|703097621|ref|XP_010096164.1| (Far upstream element-binding protein 2 [Morus notabilis]) HSP 1 Score: 292.4 bits (747), Expect = 1.6e-75 Identity = 186/357 (52.10%), Postives = 226/357 (63.31%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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