Carg22048 (gene) Silver-seed gourd

Overview
NameCarg22048
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionfar upstream element-binding protein 2-like
LocationCucurbita_argyrosperma_scaffold_175 : 322044 .. 326282 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATCCAATTTCGTTTTGAAGCGATTCGAACTCAAAAAGCCCTACACCATCGTTCCCGGCCGCGCCACACCGCTGAATCTTCATTCCTCTTTTCACTCTCACTCTCTGCGCCGGAGTTCGCCTGATTCCGACCGCCATGAAAGACTCCGATGACGGAGAAGAGCTTCACTCCGACTCTAACAAGCGCAAGCTCGAACAGAATATTCAATTGGCTAAGCTAAAGGCTCAGGAAATCGTTGCTAAGCTAGTGAGCGATGCCGAGTCCAAACGCCCTCGTTTTGACTATGAATCACCCGCTACCGCCCCCGCGCCACAAAACCCTCCATTACCCTCCTCTTCATTTCCTGGTAAGCCAGAGATTTTTTACTGATTCTTGCGACATGAATTTTTGTTCTTTCATTTGTGGTTGGATATAGACTAGTTTGGTAGCATAGATATAAGCGGAAATTGGGCATCAATTTTTTTTTTCTAAAGATGAGTCTACTTTGTGTGGGTGGGTGACATCAATTCATCGGCAATCCAAGGGTTCTGAAATCAATTTCGGAGAGTGTTATGGAGTTTGTAACAATTAGAACCCTTATTGTGTTCTTTAGATTTCACCCCGTTGTAATCTGCCAAACAATGGGAATGTTGATGAAAATGAAACTCTGTCTTTATGGAAATTTGTGGTTTGAAGCTATTGAAAATTTCCCTTTCACGTTTAACAACAGGTAGCTCCATGTTTTGGATCAATCTTGCTCTAGTTTCATGATCATTTCAAGCATTTATGGGATCTTTTGGATCAATCTTCGAGATCTTTTGTGTTCGTCACTGAAAATCCTTTTTCTTTTTTGTTGCTTTTCTTCTATGTTTGTTTGTATCTAATTGCTTGTTTCTTGAGATTCTTTTTTGGCGTGTTTTATATGCTTAAGAATTTTGATTTTACTAATCAGGAAGCAGATGTTCATGTATTTTCATACTCAAATATCTTTGCTTCGTGTCGTGTATCGCTTCTTGCATTAAGATTTTCCAACATCCTTTGGCAACCTTGAGATTCACACTGCATTCTGTGTAAATTAAATACTGAACATGTCGTTACACTTTCTATTGAAAAGAAACTCGAAATTTCAATGCTAGATTTTGCTAACTTTTAAGTGTTCAGTTTCTTCTGGTACTCAAACAGGTCCATATCGTGGTTTTCAAACCACGAGTAAGAAAATAAATATTCCAACTATGAAGGTACTTGGTTGCCCATCTTGTTTTTTAGATAGATTACCATTTGCATATTACTGACAAAGATGATTATTTCTTTTCGAATCCGTTTGTAGGTTGGGTTGATTATCGGGAAAGGTGGAGAAACAATCAAATACCTACAACTTCAATCCGGGGCTAAAATCCAGATCACTAGAGATTTCGAAGCTGATCCTCAGTCTTTGACGAGAGACGTTGAATTAATGGGCACTTCAGAACAAGTTAGCAGGGCAGAACAACTTATTAATGAAGTAATTGCGGAGGTGAGCACTAATTAAAATGCTATCATTGTCGACCTTTGTGTTGTAAATGTAACGGTCCAAGCTCACTGCTAGCAGATATTGTCCTCTTTGGGCTTTCCTTTTCGTGCTTCCCCTTAAGGTTTTTAAAACGCATCTACTAGGGAAAGGTTTCTATACCCTTATAAAGAATGATTCTTCCCCTCTCCAACCGATGTGAGATCTCACAGTCCACCCCCTTCGAGCCCAGCGTCCTCGCTGGCACTCGTTCCCCTCTCCAATCGATGTGGGACCCCTCATCCACCTGGTGTCCACCCCCCCCTTCGGGGTTCAGCCTCCTTGTTGGCACATCCTGGTGTCTGGCTCTTATACCATTTGCAACAGCCCAAGCCCACTGTTGGCAAATATTGTCCTCTTTAGGCTTTCCATTTCGGGATTCCTCTCAAGGTTTTTTAAAATGCGTATGCTAGGCAGAGGTTTCTACATCCTTATAAATAATGATTCGTTCCCCTCTCCAACCGATGTGGGATCTCACAGTCCACCCCCTTCGAGCCCAGCGTCCTCGCTGGCACTTGTTCCCCTCTCCAATCGAGGTGGGACCCCTCATCCACCTGGTGTCCACCCCCACCCCCCCCCCCCCCCCGGGTTCAGCCTCCTTGCTAGCACATCCCGGTGTCTAGCTCTTATACCATTTGCAACAGCCCAAGCCCACTGCCGGCAGATATTGTCCTCTTTGGGCTTTCCATTTCGGGATTCCCCTCAAGGTTTTTTAAAACGCGTATGCTAGGGAGAGGTTTCCACATTCTTATAAATAATGATTCGTTCTCCTCTCCAACCGGTGTGGGATCTCACAGTAGATGTAAACTAATTTAGGCACCTTAATGTAACAGGCAGATTCAGGGGGTTCTGCCTCAACTGCAAATCAGGCAATGTACTCAAGTCAACCTGGAGTTGAGCAGTTTGTAATGAAGATTCCTAATAATAAGGTAATTGCTTTGGTTGTGTTTTATCTACCCTTGAAGGTTAAACTAATATTATGATAATAATTTTGTTTATAGGTTGCACTTGTCATCGGAAAGGGAGGTGAAACTATAAAGAGTATACAGAGCAAGTCGGTTGCACGCGTTCAGGTATTATTTAACTTGCGAGACCTGGAGACCATCAAACCGTTTCCAATTTTTTGCAGGCCAAATCATCTAAGAGTCTAAAATTAGCAAGCTTTAAGGCATATTACTGCTCCAATCTGTTTAGTTTTGTAACCTTGACTTGTCAGAATTGTTTACCGTCACATTATTCCGACATCTCAGCCCTTAATTCAATATTACATGGCTCTCTGCATCGTTCACATTATACTCTTAATACTCGATATGCTTTTGTTTCTTCATGTGGAACGCAAGACGTGACGTCTTGCCTCTTATCTTTGTAAGGCTGTTATCCGAATCCAGAATGCTATTAATCATTTTCTTGTTCGGACTCCTACCCTACAGATTATCCCTTTGCACCTCCCTCCAGGAGATACTTCGACTGAGAGAACGGTTTATATTAATGGTCTGAAGGAGCAGATTGAGTCAGCCAAAGAATTGATTAACGAAGTAATAAATGGGGTAAGTCATCAGGTACCTGTACTGCCTTAGCATACTTTTGTATGGAATTATGATTTCCTAGAATTCTAAATGGAAGCATTAGGAAATAACATCTGAACTGTCAAATATCTTCATAGCTACGCCCCTAATATCTTCCTGGCTCCATTAATTTCTGCTGAGGTTTCTGTGGTGTTGATCAAACTATGCTTGATGTAATTTTCATGGCAAGTGTGTTCTAACATCTTGCTCATATGTTTGTGCTAAGTTCACTGCAAATCATTATTGTATCTTTCGTTAGTGTACACTTTGATCGGTTGCTGGAATTTGAATGCTATTGTTCTGAGACGTACATGCTCCTCTTTCTGCAGAAACGTCTGGTAAATGCCTCTGAAACAACTAGCTATGCACAACCAACGTACCCCCCTCCTAACAATTGGTCTCAAGCTGGACAACCTCCATTGCAGCAACCCCAATATGGATATGCACCCGGAACCTATCCACCGCCTCCGGGGGCTTCGTATTATAGTAATTATCCAACTCAAGTAGGAAGCTGGGATCAGGCAAACCAATCGACCATTCAGCCATCGGAACAAAGTACAGGATATGATTACTATGGCCAACAGTCTCATGTCGGGTCAGCTCCTCCGTATCATAGCTATGCCTACGGTCAATCAGCCTCAACTGGCACTCATGGTTATGATCAGAGCTACTCCCAACAGGCACCGAGTTATGGGCAAAATTTCTCCGGCCAGTTTCATCCAGACGATCAGCAAAGCATGTACCTTAACTCAGGGGGTGCACCACCTGCTGTGCCATCAACAAATGGAACTGAGGGTACATATCCAGGTGCAGCATACCAAGTTTCCAATGGCCAACCAATGGCAAACCCTCTGTCTGGGTACTGGACTTACCCAAGCGACACGACCCAACTGCTTCCTCAGGCTGGAAATGACCCGTCCGAGTCTTATCCACCTCAGCCCATGTATGAACAGAGTGAGTACCCTCCACCACCAGGCGTGTATTCTCAAGGAGTAACCCCCTCAGCTTCGTGTCCTCCACAGACAGTGGCACAAACCCAATCGCAACCCCCATCGGTTCTCGGAGTTGAACCATCTGGAGATGGAAATTCAAACGGAGCCCAAAGCTTATCTCCTGCTGTGCAGGAAACTGGCAATTCAGAAAGTTGA

mRNA sequence

AAATCCAATTTCGTTTTGAAGCGATTCGAACTCAAAAAGCCCTACACCATCGTTCCCGGCCGCGCCACACCGCTGAATCTTCATTCCTCTTTTCACTCTCACTCTCTGCGCCGGAGTTCGCCTGATTCCGACCGCCATGAAAGACTCCGATGACGGAGAAGAGCTTCACTCCGACTCTAACAAGCGCAAGCTCGAACAGAATATTCAATTGGCTAAGCTAAAGGCTCAGGAAATCGTTGCTAAGCTAGTGAGCGATGCCGAGTCCAAACGCCCTCGTTTTGACTATGAATCACCCGCTACCGCCCCCGCGCCACAAAACCCTCCATTACCCTCCTCTTCATTTCCTGTTTCTTCTGGTACTCAAACAGGTCCATATCGTGGTTTTCAAACCACGAGTAAGAAAATAAATATTCCAACTATGAAGGTTGGGTTGATTATCGGGAAAGGTGGAGAAACAATCAAATACCTACAACTTCAATCCGGGGCTAAAATCCAGATCACTAGAGATTTCGAAGCTGATCCTCAGTCTTTGACGAGAGACGTTGAATTAATGGGCACTTCAGAACAAGTTGCACTTGTCATCGGAAAGGGAGGTGAAACTATAAAGAGTATACAGAGCAAGTCGGTTGCACGCGTTCAGGCTGTTATCCGAATCCAGAATGCTATTAATCATTTTCTTGTTCGGACTCCTACCCTACAGATTATCCCTTTGCACCTCCCTCCAGGAGATACTTCGACTGAGAGAACGGTTTATATTAATGGTCTGAAGGAGCAGATTGAGTCAGCCAAAGAATTGATTAACGAAGTAATAAATGGGAAACGTCTGGTAAATGCCTCTGAAACAACTAGCTATGCACAACCAACGTACCCCCCTCCTAACAATTGGTCTCAAGCTGGACAACCTCCATTGCAGCAACCCCAATATGGATATGCACCCGGAACCTATCCACCGCCTCCGGGGGCTTCGTATTATAGTAATTATCCAACTCAAGTAGGAAGCTGGGATCAGGCAAACCAATCGACCATTCAGCCATCGGAACAAAGTACAGGATATGATTACTATGGCCAACAGTCTCATGTCGGGTCAGCTCCTCCGTATCATAGCTATGCCTACGGTCAATCAGCCTCAACTGGCACTCATGGTTATGATCAGAGCTACTCCCAACAGGCACCGAGTTATGGGCAAAATTTCTCCGGCCAGTTTCATCCAGACGATCAGCAAAGCATGTACCTTAACTCAGGGGGTGCACCACCTGCTGTGCCATCAACAAATGGAACTGAGGGTACATATCCAGGTGCAGCATACCAAGTTTCCAATGGCCAACCAATGGCAAACCCTCTGTCTGGGTACTGGACTTACCCAAGCGACACGACCCAACTGCTTCCTCAGGCTGGAAATGACCCGTCCGAGTCTTATCCACCTCAGCCCATGTATGAACAGAGTGAGTACCCTCCACCACCAGGCGTGTATTCTCAAGGAGTAACCCCCTCAGCTTCGTGTCCTCCACAGACAGTGGCACAAACCCAATCGCAACCCCCATCGGTTCTCGGAGTTGAACCATCTGGAGATGGAAATTCAAACGGAGCCCAAAGCTTATCTCCTGCTGTGCAGGAAACTGGCAATTCAGAAAGTTGA

Coding sequence (CDS)

ATGAAAGACTCCGATGACGGAGAAGAGCTTCACTCCGACTCTAACAAGCGCAAGCTCGAACAGAATATTCAATTGGCTAAGCTAAAGGCTCAGGAAATCGTTGCTAAGCTAGTGAGCGATGCCGAGTCCAAACGCCCTCGTTTTGACTATGAATCACCCGCTACCGCCCCCGCGCCACAAAACCCTCCATTACCCTCCTCTTCATTTCCTGTTTCTTCTGGTACTCAAACAGGTCCATATCGTGGTTTTCAAACCACGAGTAAGAAAATAAATATTCCAACTATGAAGGTTGGGTTGATTATCGGGAAAGGTGGAGAAACAATCAAATACCTACAACTTCAATCCGGGGCTAAAATCCAGATCACTAGAGATTTCGAAGCTGATCCTCAGTCTTTGACGAGAGACGTTGAATTAATGGGCACTTCAGAACAAGTTGCACTTGTCATCGGAAAGGGAGGTGAAACTATAAAGAGTATACAGAGCAAGTCGGTTGCACGCGTTCAGGCTGTTATCCGAATCCAGAATGCTATTAATCATTTTCTTGTTCGGACTCCTACCCTACAGATTATCCCTTTGCACCTCCCTCCAGGAGATACTTCGACTGAGAGAACGGTTTATATTAATGGTCTGAAGGAGCAGATTGAGTCAGCCAAAGAATTGATTAACGAAGTAATAAATGGGAAACGTCTGGTAAATGCCTCTGAAACAACTAGCTATGCACAACCAACGTACCCCCCTCCTAACAATTGGTCTCAAGCTGGACAACCTCCATTGCAGCAACCCCAATATGGATATGCACCCGGAACCTATCCACCGCCTCCGGGGGCTTCGTATTATAGTAATTATCCAACTCAAGTAGGAAGCTGGGATCAGGCAAACCAATCGACCATTCAGCCATCGGAACAAAGTACAGGATATGATTACTATGGCCAACAGTCTCATGTCGGGTCAGCTCCTCCGTATCATAGCTATGCCTACGGTCAATCAGCCTCAACTGGCACTCATGGTTATGATCAGAGCTACTCCCAACAGGCACCGAGTTATGGGCAAAATTTCTCCGGCCAGTTTCATCCAGACGATCAGCAAAGCATGTACCTTAACTCAGGGGGTGCACCACCTGCTGTGCCATCAACAAATGGAACTGAGGGTACATATCCAGGTGCAGCATACCAAGTTTCCAATGGCCAACCAATGGCAAACCCTCTGTCTGGGTACTGGACTTACCCAAGCGACACGACCCAACTGCTTCCTCAGGCTGGAAATGACCCGTCCGAGTCTTATCCACCTCAGCCCATGTATGAACAGAGTGAGTACCCTCCACCACCAGGCGTGTATTCTCAAGGAGTAACCCCCTCAGCTTCGTGTCCTCCACAGACAGTGGCACAAACCCAATCGCAACCCCCATCGGTTCTCGGAGTTGAACCATCTGGAGATGGAAATTCAAACGGAGCCCAAAGCTTATCTCCTGCTGTGCAGGAAACTGGCAATTCAGAAAGTTGA

Protein sequence

MKDSDDGEELHSDSNKRKLEQNIQLAKLKAQEIVAKLVSDAESKRPRFDYESPATAPAPQNPPLPSSSFPVSSGTQTGPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQVALVIGKGGETIKSIQSKSVARVQAVIRIQNAINHFLVRTPTLQIIPLHLPPGDTSTERTVYINGLKEQIESAKELINEVINGKRLVNASETTSYAQPTYPPPNNWSQAGQPPLQQPQYGYAPGTYPPPPGASYYSNYPTQVGSWDQANQSTIQPSEQSTGYDYYGQQSHVGSAPPYHSYAYGQSASTGTHGYDQSYSQQAPSYGQNFSGQFHPDDQQSMYLNSGGAPPAVPSTNGTEGTYPGAAYQVSNGQPMANPLSGYWTYPSDTTQLLPQAGNDPSESYPPQPMYEQSEYPPPPGVYSQGVTPSASCPPQTVAQTQSQPPSVLGVEPSGDGNSNGAQSLSPAVQETGNSES
Homology
[Close]
BLAST of Carg22048 vs. NCBI nr
Match: XP_022952410.1 (far upstream element-binding protein 2-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 683.3 bits (1762), Expect = 6.1e-193
Identity = 442/526 (84.03%), Postives = 449/526 (85.36%), Query Frame = 0 

Query: 1   MKDSDDGEELHSDSNKRKLEQNIQLAKLKAQEIVAKLVSDAESKRPRFDYESPATAPAPQ 60
           MKDSDDGEELHSDSNKRKLEQNIQLAKLKAQEIVAKLVSDAESKRPRFDYESPATAPAPQ
Sbjct: 1   MKDSDDGEELHSDSNKRKLEQNIQLAKLKAQEIVAKLVSDAESKRPRFDYESPATAPAPQ 60

Query: 61  NPPLPSSSFPVSSGTQTGPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQ 120
           NPPLPSSSFPVSSGTQTGPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQ
Sbjct: 61  NPPLPSSSFPVSSGTQTGPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQ 120

Query: 121 ITRDFEADPQSLTRDVELMGTS--XXXXXXXXXXXXXXXXXXXXXXXXXXXVIRIQNAIN 180
           ITRDFEADPQSLTRDVELMGTS                             +   Q  + 
Sbjct: 121 ITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTANQAMNSSQPGVE 180

Query: 181 HFLVRTPT------------------------LQIIPLHLPPGDTSTERTVYINGLKEQI 240
            F+++ P                         +QIIPLHLPPGDTSTERTVYINGLKEQI
Sbjct: 181 QFVMKIPNNKVALVIGKGGETIKSIQSKSVARVQIIPLHLPPGDTSTERTVYINGLKEQI 240

Query: 241 ESAKELINEVINGKRLVNASETTSYAQPTYPPPNNWSQAGQPPLQQPQYXXXXXXXXXXX 300
           ESAKELINEVINGKRLVNASETTSYAQPTYPPPNNWSQAGQPPLQQPQYXXXXXXXXXXX
Sbjct: 241 ESAKELINEVINGKRLVNASETTSYAQPTYPPPNNWSQAGQPPLQQPQYXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXVGSWDQANQSTIQPSEQSTGYDYYGQQSHVGSAPPYHSYAYGQSASTGT 360
           XXXXXXXXXXXVGSWDQANQSTIQPSEQSTGYDYYGQQSHVGSAPPYHSYAYGQSASTGT
Sbjct: 301 XXXXXXXXXXXVGSWDQANQSTIQPSEQSTGYDYYGQQSHVGSAPPYHSYAYGQSASTGT 360

Query: 361 XXXXXXXXXXXXXXXXXXXXQFHPDDQQSMYLNSGGAPPAVPSTNGT-EGTYPGAAYQVS 420
           XXXXXXXXXXXXXXXXXXXXQFHPDDQQSMYLNSGGAPPAVPSTNGT EGTYPGAAYQ+S
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXQFHPDDQQSMYLNSGGAPPAVPSTNGTSEGTYPGAAYQIS 420

Query: 421 NGQPMANPLSGYWTYPSDTTQLLPQAGNDPSESYPPQPMYEXXXXXXXXXXXXXXXXXXX 480
           NGQPMANPLSGYWTYPSDTTQLLPQAGNDPS SYPPQPMYEXXXXXXXXXXXXXXXXXXX
Sbjct: 421 NGQPMANPLSGYWTYPSDTTQLLPQAGNDPSVSYPPQPMYEXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXVLGVEPSGDGNSNGAQSLSPAVQETGNSES 500
           XXX             VLGVEPSGDGNSNGAQSLSPAVQETGNSES
Sbjct: 481 XXXPQTVAQTQSQPPSVLGVEPSGDGNSNGAQSLSPAVQETGNSES 526

[Close]
BLAST of Carg22048 vs. NCBI nr
Match: XP_022952411.1 (far upstream element-binding protein 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 637.1 bits (1642), Expect = 5.0e-179
Identity = 432/526 (82.13%), Postives = 439/526 (83.46%), Query Frame = 0 

Query: 1   MKDSDDGEELHSDSNKRKLEQNIQLAKLKAQEIVAKLVSDAESKRPRFDYESPATAPAPQ 60
           MKDSDDGEELHSDSNKRKLEQNIQLAKLKAQEIVAKLVSDAESKRPRFDYESPATAPAPQ
Sbjct: 1   MKDSDDGEELHSDSNKRKLEQNIQLAKLKAQEIVAKLVSDAESKRPRFDYESPATAPAPQ 60

Query: 61  NPPLPSSSFPVSSGTQTGPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQ 120
           NPPLPSSSFPVSSGTQTGPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQ
Sbjct: 61  NPPLPSSSFPVSSGTQTGPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQ 120

Query: 121 ITRDFEADPQSLTRDVELMGTS--XXXXXXXXXXXXXXXXXXXXXXXXXXXVIRIQNAIN 180
           ITRDFEADPQSLTRDVELMGTS                             +   Q  + 
Sbjct: 121 ITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTANQAMNSSQPGVE 180

Query: 181 HFLVRTPT------------------------LQIIPLHLPPGDTSTERTVYINGLKEQI 240
            F+++ P                         +QIIPLHLPPGDTSTERTVYINGLKEQI
Sbjct: 181 QFVMKIPNNKVALVIGKGGETIKSIQSKSVARVQIIPLHLPPGDTSTERTVYINGLKEQI 240

Query: 241 ESAKELINEVINGKRLVNASETTSYAQPTYPPPNNWSQAGQPPLQQPQYXXXXXXXXXXX 300
           ESAKELINEVINGKRLVNASETTSYAQPTYPPPNNWSQAGQPPLQQPQYXXXXXXXXXXX
Sbjct: 241 ESAKELINEVINGKRLVNASETTSYAQPTYPPPNNWSQAGQPPLQQPQYXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXVGSWDQANQSTIQPSEQSTGYDYYGQQSHVGSAPPYHSYAYGQSASTGT 360
           XXXXXXXXXXXVGSWDQANQSTIQPSEQSTGYDYYGQQSHVGSAPPYHSYAYGQSASTGT
Sbjct: 301 XXXXXXXXXXXVGSWDQANQSTIQPSEQSTGYDYYGQQSHVGSAPPYHSYAYGQSASTGT 360

Query: 361 XXXXXXXXXXXXXXXXXXXXQFHPDDQQSMYLNSGGAPPAVPSTNGT-EGTYPGAAYQVS 420
           XXXXXXXXXXXXXXXXXXXXQFHPDDQQSMYLNSGGAPPAVPSTNGT EGTYPGAAYQ+S
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXQFHPDDQQSMYLNSGGAPPAVPSTNGTSEGTYPGAAYQIS 420

Query: 421 NGQPMANPLSGYWTYPSDTTQLLPQAGNDPSESYPPQPMYEXXXXXXXXXXXXXXXXXXX 480
           NGQPMANPLSGYWTYPSDTTQLLPQAGNDPS SYP            XXXXXXXXXXXXX
Sbjct: 421 NGQPMANPLSGYWTYPSDTTQLLPQAGNDPSVSYP------------XXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXVLGVEPSGDGNSNGAQSLSPAVQETGNSES 500
           XXXXXXXXXXXXXXXX           SNGAQSLSPAVQETGNSES
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXSNGAQSLSPAVQETGNSES 514

[Close]
BLAST of Carg22048 vs. NCBI nr
Match: XP_023554288.1 (far upstream element-binding protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 634.0 bits (1634), Expect = 4.2e-178
Identity = 419/526 (79.66%), Postives = 426/526 (80.99%), Query Frame = 0 

Query: 1   MKDSDDGEELHSDSNKRKLEQNIQLAKLKAQEIVAKLVSDAESKRPRFDYESPATAPAPQ 60
           MKDSDDGEELHSDSNKRKLEQNIQLAKLKAQEIVAKLVSDAESKRPRFDYESPATAPAPQ
Sbjct: 1   MKDSDDGEELHSDSNKRKLEQNIQLAKLKAQEIVAKLVSDAESKRPRFDYESPATAPAPQ 60

Query: 61  NPPLPSSSFPVSSGTQTGPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQ 120
           NPPLPSSSFPVSSGTQTGPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQ
Sbjct: 61  NPPLPSSSFPVSSGTQTGPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQ 120

Query: 121 ITRDFEADPQSLTRDVELMGTS--XXXXXXXXXXXXXXXXXXXXXXXXXXXVIRIQNAIN 180
           ITRDFEADPQSLTRDVELMGTS                             +   Q  + 
Sbjct: 121 ITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTANQAMNSSQPGVE 180

Query: 181 HFLVRTPT------------------------LQIIPLHLPPGDTSTERTVYINGLKEQI 240
            F+++ P                         +QIIPLHLPPGDTSTERTVYINGLKEQI
Sbjct: 181 QFVMKIPNNKVALVIGKGGETIKSIQSKSVARVQIIPLHLPPGDTSTERTVYINGLKEQI 240

Query: 241 ESAKELINEVINGKRLVNASETTSYAQPTYPPPNNWSQAGQPPLQQPQYXXXXXXXXXXX 300
           ESAKELINEVINGKRLVNASET+SYAQPTYPPPNNWSQAGQPPLQQPQY XXXXXXXXXX
Sbjct: 241 ESAKELINEVINGKRLVNASETSSYAQPTYPPPNNWSQAGQPPLQQPQYGXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXVGSWDQANQSTIQPSEQSTGYDYYGQQSHVGSAPPYHSYAYGQSASTGT 360
                      VGSWDQANQSTIQPSEQSTGYDYYGQQSHVGSAPPYHSYAYGQSASTGT
Sbjct: 301 GAPYYSNYPTQVGSWDQANQSTIQPSEQSTGYDYYGQQSHVGSAPPYHSYAYGQSASTGT 360

Query: 361 XXXXXXXXXXXXXXXXXXXXQFHPDDQQSMYLNSGGAPPAVPSTNGT-EGTYPGAAYQVS 420
           XXXXXXXXXXXXXXXXXXXXQFHPDDQQSMYLNSGGAPPAVPSTNGT EG YPGAAYQVS
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXQFHPDDQQSMYLNSGGAPPAVPSTNGTSEGIYPGAAYQVS 420

Query: 421 NGQPMANPLSGYWTYPSDTTQLLPQAGNDPSESYPPQPMYEXXXXXXXXXXXXXXXXXXX 480
           NGQPMANPLSGYWTYPSD TQLLPQAGNDPSESYP            XXXXXXXXXXXXX
Sbjct: 421 NGQPMANPLSGYWTYPSDMTQLLPQAGNDPSESYP------------XXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXVLGVEPSGDGNSNGAQSLSPAVQETGNSES 500
           XXXXXXXXXXXXXXXX           SNGAQSLSPAVQETGNSES
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXSNGAQSLSPAVQETGNSES 514

[Close]
BLAST of Carg22048 vs. NCBI nr
Match: XP_022972343.1 (far upstream element-binding protein 2-like [Cucurbita maxima])

HSP 1 Score: 622.5 bits (1604), Expect = 1.3e-174
Identity = 412/526 (78.33%), Postives = 422/526 (80.23%), Query Frame = 0 

Query: 1   MKDSDDGEELHSDSNKRKLEQNIQLAKLKAQEIVAKLVSDAESKRPRFDYESPATAPAPQ 60
           MKDSDDGEELHSDSNKRKLEQNIQLAKLKAQEIVAK+VSDAESKRPRFDYESPATAPAPQ
Sbjct: 1   MKDSDDGEELHSDSNKRKLEQNIQLAKLKAQEIVAKIVSDAESKRPRFDYESPATAPAPQ 60

Query: 61  NPPLPSSSFPVSSGTQTGPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQ 120
           NPPLPSSSFPVSSGTQTGPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQ
Sbjct: 61  NPPLPSSSFPVSSGTQTGPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQ 120

Query: 121 ITRDFEADPQSLTRDVELMGTS--XXXXXXXXXXXXXXXXXXXXXXXXXXXVIRIQNAIN 180
           ITRDFEADPQSLTRDVELMGTS                             +   Q  + 
Sbjct: 121 ITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEAIAEADSGGSASTANQAMNSSQPGVE 180

Query: 181 HFLVRTPT------------------------LQIIPLHLPPGDTSTERTVYINGLKEQI 240
            F+++ P                         +QIIPLHLPPGDTS ERTVYINGLKEQI
Sbjct: 181 QFVMKIPNNKVALVIGKGGETIKSIQSKSVARVQIIPLHLPPGDTSIERTVYINGLKEQI 240

Query: 241 ESAKELINEVINGKRLVNASETTSYAQPTYPPPNNWSQAGQPPLQQPQYXXXXXXXXXXX 300
           ESAKE+INEVINGKRLVNASETTSYAQPTYPPPNNWSQAGQPPLQQPQY XXXXXXXXXX
Sbjct: 241 ESAKEMINEVINGKRLVNASETTSYAQPTYPPPNNWSQAGQPPLQQPQYGXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXVGSWDQANQSTIQPSEQSTGYDYYGQQSHVGSAPPYHSYAYGQSASTGT 360
                      VGSWDQANQSTIQPSEQSTGYDYYGQQSH GSAPPYHSYAYGQSAST  
Sbjct: 301 GAPYYSNYPTQVGSWDQANQSTIQPSEQSTGYDYYGQQSHFGSAPPYHSYAYGQSASTXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXQFHPDDQQSMYLNSGGAPPAVPSTNGT-EGTYPGAAYQVS 420
           XXXXXXXXXXXXXXXXXXXXQFHPDD+QSMYLNSGGAPP+VPSTNGT EGTYPGAAYQVS
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXQFHPDDRQSMYLNSGGAPPSVPSTNGTSEGTYPGAAYQVS 420

Query: 421 NGQPMANPLSGYWTYPSDTTQLLPQAGNDPSESYPPQPMYEXXXXXXXXXXXXXXXXXXX 480
           NGQPMANPLSGYWTYPSDTTQLLPQAGNDPSESYP            XXXXXXXXXXXXX
Sbjct: 421 NGQPMANPLSGYWTYPSDTTQLLPQAGNDPSESYP------------XXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXVLGVEPSGDGNSNGAQSLSPAVQETGNSES 500
           XXXXXXXXXXXXXXXX            NGAQSLSPAVQET NSES
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXNGAQSLSPAVQETANSES 514

[Close]
BLAST of Carg22048 vs. NCBI nr
Match: XP_023530085.1 (far upstream element-binding protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 482.6 bits (1241), Expect = 1.6e-132
Identity = 297/459 (64.71%), Postives = 322/459 (70.15%), Query Frame = 0 

Query: 1   MKDSDDGEELHSDSNKRKLEQNIQLAKLKAQEIVAKLVSDAESKRPRFDYESPATAPAPQ 60
           MKD  D +ELH D+NKRKLEQNIQLAK KAQEIVAKLVS+AESKRPRFDYE P+ +PA Q
Sbjct: 1   MKDHQDTQELHPDTNKRKLEQNIQLAKQKAQEIVAKLVSNAESKRPRFDYEPPSASPASQ 60

Query: 61  NPPLPSSSFPVSSGTQTGPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQ 120
           NP   +S FPVSSGTQTGPY GFQ+TSKKINIP +KVGLIIGKGGETIKYLQLQSGAKIQ
Sbjct: 61  NPLSSASPFPVSSGTQTGPYHGFQSTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQ 120

Query: 121 ITRDFEADPQSLTRDVELMGTS--XXXXXXXXXXXXXXXXXXXXXXXXXXXVIRIQNAIN 180
           ITRDFEADPQSLTRDVELMGTS                             +   Q  + 
Sbjct: 121 ITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVMAEADSGASPATTNQGMTSSQPGVE 180

Query: 181 HFLVRTPT------------------------LQIIPLHLPPGDTSTERTVYINGLKEQI 240
            F+++ P                         +Q+IPLHLPPGDTSTER VYINGLKEQI
Sbjct: 181 QFVMKIPNNKVALVIGKGGETIKGIQSKSAARVQVIPLHLPPGDTSTERNVYINGLKEQI 240

Query: 241 ESAKELINEVINGKRLVNASETTSYAQPTYPPPNNWSQAG-QPPL---QQPQYXXXXXXX 300
           ESAKELINEV++GKRLVN SETTSYAQ TYPPP NWSQAG QPPL   QQPQY       
Sbjct: 241 ESAKELINEVMSGKRLVNTSETTSYAQSTYPPPTNWSQAGQQPPLQQQQQPQYGYAPGTY 300

Query: 301 XXXXXXXXXXXXXXXVGSWDQANQSTIQPSEQSTGYDYYGQQSHVGSAPPYHSYAYGQSA 360
                          VGSWD ANQ++IQPSEQSTGY+YYGQQS VGSAPPY  Y YGQ  
Sbjct: 301 PPTPGPPYYSNYPTQVGSWDHANQASIQPSEQSTGYNYYGQQSQVGSAPPYPGYGYGQPG 360

Query: 361 STGTXXXXXXXXXXXXXXXXXXXXQFHPDDQQSMYLNSGGAPPAVPSTNG--TEGTYPGA 420
           S   XXXXXXXXXXXXXXXXXXXX        +MYLNSGGAPP V STNG  TEGTYP A
Sbjct: 361 SAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNMYLNSGGAPPGVLSTNGTDTEGTYPTA 420

Query: 421 AYQVSNGQPMANPLSGYWTYPSDTTQLLPQAGNDPSESY 428
           AYQVS+GQP+ N ++GYWTYPSD TQ LPQ GND S  Y
Sbjct: 421 AYQVSDGQPVVNSMNGYWTYPSDLTQSLPQTGNDQSGYY 459

[Close]
BLAST of Carg22048 vs. TAIR10
Match: AT2G25970.1 (KH domain-containing protein)

HSP 1 Score: 156.8 bits (395), Expect = 3.6e-38
Identity = 119/280 (42.50%), Postives = 155/280 (55.36%), Query Frame = 0 

Query: 23  IQLAKLKAQEIVAKLVSDAESKRPR------FDYE-----SPATAPAPQNPPLPSSSFPV 82
           IQ+AK KAQEI A+L++ A++KRPR      +DY      S   +   Q      SS PV
Sbjct: 67  IQIAKQKAQEIAARLLNSADAKRPRVDNGASYDYGDNKGFSSYPSEGKQMSGTVPSSIPV 126

Query: 83  SSGTQTGPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQS 142
           S       Y  FQ T+KKI+IP M+VG+IIGKGGETIKYLQLQSGAKIQ+TRD +ADP  
Sbjct: 127 S-------YGSFQGTTKKIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNC 186

Query: 143 LTRDVELMGT----SXXXXXXXXXXXXXXXXXXXXXXXXXXXVIRIQNAINHFLVRTPT- 202
            TR V+L GT    S                   XXXXXXXX    Q   + F+++ P  
Sbjct: 187 ATRTVDLTGTPDQISKAEQLITDVLQEAEAGNTAXXXXXXXXXXGGQAGADQFVMKIPNN 246

Query: 203 -----------------------LQIIPLHLPPGDTSTERTVYINGLKEQIESAKELINE 260
                                  +Q+IPLHLPPGD + ERT+ I+G+ EQIE AK+L+NE
Sbjct: 247 KVGLIIGKGGETIKSMQAKTGARIQVIPLHLPPGDPTPERTLQIDGITEQIEHAKQLVNE 306

[Close]
BLAST of Carg22048 vs. TAIR10
Match: AT4G10070.1 (KH domain-containing protein)

HSP 1 Score: 85.9 bits (211), Expect = 7.8e-17
Identity = 67/202 (33.17%), Postives = 94/202 (46.53%), Query Frame = 0 

Query: 86  TSKKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGT---- 145
           T+++I++P+ KVG++IGKGGETI+YLQ  SGAKIQI RD EADP S  R VE++G+    
Sbjct: 176 TTRRIDVPSSKVGVLIGKGGETIRYLQFNSGAKIQILRDSEADPSSALRPVEIIGSVACI 235

Query: 146 -----------SXXXXXXXXXXXXXXXXXXXXXXXXXXXVIRIQN------------AIN 205
                      +                            I++ N             I 
Sbjct: 236 ESAEKLISAVIAEAEAGGSPALVARGHPSTHAIGIPEQIEIKVPNDKVGLIIGRGGETIK 295

Query: 206 HFLVRT-PTLQIIPLHLPPGDTSTERTVYINGLKEQIESAKELINEVINGKRLVNASETT 255
           +   R+    Q+IP H   GD   ERTV I+G K QI+ A ++I +V+N +    +S + 
Sbjct: 296 NMQTRSGARTQLIPQH-AEGDGLKERTVRISGDKMQIDIATDMIKDVMN-QNARPSSYSG 355

[Close]
BLAST of Carg22048 vs. TAIR10
Match: AT1G33680.1 (KH domain-containing protein)

HSP 1 Score: 74.3 bits (181), Expect = 2.3e-13
Identity = 80/290 (27.59%), Postives = 115/290 (39.66%), Query Frame = 0 

Query: 85  TTSKKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGT--- 144
           +T+++I++P+ KVG +IGKGGE ++YLQ+ SGAKIQI RD EADP S  R VE++GT   
Sbjct: 231 STTRRIDVPSSKVGTLIGKGGEMVRYLQVNSGAKIQIRRDAEADPSSALRPVEIIGTVSC 290

Query: 145 ----------------SXXXXXXXXXXXXXXXXXXXXXXXXXXXVIRIQNAINHFLVRT- 204
                           +                           + R    I +   ++ 
Sbjct: 291 IEKAEKLINAVIAEVEAGGVPALAARGVPEQMEIKVPSDKVGVIIGRGGETIKNMQTKSR 350

Query: 205 PTLQIIPLHLPPGDTSTERTVYINGLKEQIESAKELINEVI--NGKRLVNASETTSYAQ- 264
             +Q+IP +   GD S ERTV I+G K QI+ A  LI +V+  +G+    +      A  
Sbjct: 351 ARIQLIPQN--EGDASKERTVRISGDKRQIDIATALIKDVMYQDGRPSPYSGGFNQQAYQ 410

Query: 265 ---PTYPP-------------PNNWSQAGQPPLQQPQYXXXXXXXXXXXXXXXXXXXXXX 324
              P  PP             P N+   G  P Q   +                      
Sbjct: 411 PRGPGGPPQWGSXXXXXXXSMPYNYHHGGPYPSQGSHFRPPNSGGYPPQHMPPRSGYG-- 470

Query: 325 VGSWDQANQSTIQPSEQSTGYDYYGQQSHVGSAP-PYHSYAYGQSASTGT 335
              W+Q           S  YDYYG+Q      P P H  +Y Q+ +  T
Sbjct: 471 -SGWEQR-------PPHSGPYDYYGRQGGQNPGPVPSHGASYSQAGAQQT 508

[Close]
BLAST of Carg22048 vs. Swiss-Prot
Match: sp|Q96AE4|FUBP1_HUMAN (Far upstream element-binding protein 1 OS=Homo sapiens OX=9606 GN=FUBP1 PE=1 SV=3)

HSP 1 Score: 48.1 bits (113), Expect = 3.2e-04
Identity = 46/129 (35.66%), Postives = 60/129 (46.51%), Query Frame = 0 

Query: 29  KAQEIVAKLVSDAES------------KRPRFDYESP-ATAPAPQNPPLPSSSFPVSSGT 88
           +A++I AK+  DA +            KRP  D + P A   APQN          S GT
Sbjct: 37  RARQIAAKIGGDAGTSLNSNDYGYGGQKRPLEDGDQPDAKKVAPQND---------SFGT 96

Query: 89  QTGPYRGFQTTS---KKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSL 142
           Q  P    Q+ S   ++  +P   VG IIG+GGE I  +Q +SG KIQI  D    P+  
Sbjct: 97  QLPPMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPE-- 153

[Close]
BLAST of Carg22048 vs. Swiss-Prot
Match: sp|Q91WJ8|FUBP1_MOUSE (Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 7.2e-04
Identity = 25/46 (54.35%), Postives = 31/46 (67.39%), Query Frame = 0 

Query: 78  GPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQITR 124
           GP  G Q  +    +PT K GLIIGKGGETIK +  QSGA+I++ R
Sbjct: 367 GPPGGLQEFN--FIVPTGKTGLIIGKGGETIKSISQQSGARIELQR 410

[Close]
BLAST of Carg22048 vs. Swiss-Prot
Match: sp|Q32PX7|FUBP1_RAT (Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 7.2e-04
Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 0 

Query: 78  GPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQITRD 125
           GP  G Q  +    +PT K GLIIGKGGETIK +  QSGA+I++ R+
Sbjct: 366 GPPGGLQEFN--FIVPTGKTGLIIGKGGETIKSISQQSGARIELQRN 410

[Close]
BLAST of Carg22048 vs. TrEMBL
Match: tr|A0A0A0K828|A0A0A0K828_CUCSA (RNA-binding protein Nova-1 OS=Cucumis sativus OX=3659 GN=Csa_7G074890 PE=4 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.2e-127
Identity = 317/532 (59.59%), Postives = 346/532 (65.04%), Query Frame = 0 

Query: 1   MKDSDDGEELHSDSNKRKLEQNIQLAKLKAQEIVAKLVSDAESKRPRFDYESPATAPAPQ 60
           MKD DD +ELHSD+NKRKLE+NIQLAK KAQEIVAKLVS+AESKRPRF+YE PA      
Sbjct: 1   MKDHDDADELHSDTNKRKLEENIQLAKQKAQEIVAKLVSNAESKRPRFEYEPPAXXXXXX 60

Query: 61  NPPLPSSSFPVSSGTQTGPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQ 120
           NPPL SS+F VSSGTQ GPY GFQTTSKKINIP +KVGLIIGKGGETIKYLQLQSGAKIQ
Sbjct: 61  NPPLSSSTFTVSSGTQAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQ 120

Query: 121 ITRDFEADPQSLTRDVELMGTS--XXXXXXXXXXXXXXXXXXXXXXXXXXXVIRIQNAIN 180
           ITRDFEADPQSLTRDVELMGTS                             +   Q  + 
Sbjct: 121 ITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAINSSQPGVE 180

Query: 181 HFLVRTPT------------------------LQIIPLHLPPGDTSTERTVYINGLKEQI 240
            F+++ P                         +QIIPLHLPPGDTSTER+VYINGLKEQI
Sbjct: 181 QFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQIIPLHLPPGDTSTERSVYINGLKEQI 240

Query: 241 ESAKELINEVINGKRLVNASETTSYAQPTYPPPNNWSQAG-QPPL--QQPQYXXXXXXXX 300
           ESAKELINEVI+GKRLV  SETTSYAQPTYP  NNWSQAG QPPL  QQPQY        
Sbjct: 241 ESAKELINEVISGKRLV--SETTSYAQPTYPSTNNWSQAGQQPPLQQQQPQYGYAAGTYP 300

Query: 301 XXXXXXXXXXXXXXVGSWDQANQSTIQPSEQSTGYDYYGQQSHVGSAPP-YHSYAYGQSA 360
                         V SWDQ+NQST+QPS+QSTGY+YYGQQS VGSAPP +H Y+YGQ A
Sbjct: 301 PPQGPPYYSTYPAQVASWDQSNQSTVQPSDQSTGYNYYGQQSQVGSAPPQFHDYSYGQPA 360

Query: 361 STGTXXXXXXXXXXXXXXXXXXXXQFHPD-DQQSMYLNSGGAPPAVPSTNGT-EGTYPGA 420
           S+GT                    Q  P  DQQ+MYLNSG AP A+PS+NGT EGTYP A
Sbjct: 361 SSGT-----HGYDQSYSQQAPSYGQIPPSYDQQNMYLNSGSAPSALPSSNGTSEGTYPTA 420

Query: 421 AYQVSNGQPMANPLSGYWTY-PSDTTQLLPQAGNDPSESYPPQPMYEXXXXXXXXXXXXX 480
           AYQ S         +GYWTY  +D TQ LPQ GND S SY                   X
Sbjct: 421 AYQAS---------TGYWTYQTTDQTQSLPQTGNDQSGSYQTVSGGHAQPPVYGQSVYPX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXVLGVEPSGDGNSNGAQSLSPAVQETGNSES 500
           XXXXXXXXXXXXXXXXXXXXXX    E S DGNSN  Q+L+P VQE  NSES
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXETSEDGNSNSGQNLAPTVQENANSES 516

[Close]
BLAST of Carg22048 vs. TrEMBL
Match: tr|A0A1S3BZ71|A0A1S3BZ71_CUCME (far upstream element-binding protein 2-like OS=Cucumis melo OX=3656 GN=LOC103495212 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 4.0e-108
Identity = 281/480 (58.54%), Postives = 303/480 (63.12%), Query Frame = 0 

Query: 53  PATAPAPQNPPLPSSSFPVSSGTQTGPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQ 112
           PA APAP NPPL SS+FPVSSGTQ GPY GFQTTSKKINIP +KVGLIIGKGGETIKYLQ
Sbjct: 14  PAAAPAPLNPPLSSSTFPVSSGTQAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQ 73

Query: 113 LQSGAKIQITRDFEADPQSLTRDVELMGTS--XXXXXXXXXXXXXXXXXXXXXXXXXXXV 172
           LQSGAKIQITRDFEADPQSLTRDVELMGTS                             +
Sbjct: 74  LQSGAKIQITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAM 133

Query: 173 IRIQNAINHFLVRTPT------------------------LQIIPLHLPPGDTSTERTVY 232
              Q  +  F+++ P                         +QIIPLHLPPGDTSTER+VY
Sbjct: 134 NSSQPGVEQFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQIIPLHLPPGDTSTERSVY 193

Query: 233 INGLKEQIESAKELINEVINGKRLVNASETTSYAQPTYPPPNNWSQAG-QPPL--QQPQY 292
           INGLKEQIESAKELINEVI+GKRLV  SET SYAQPTYP  NNWSQAG QPPL  QQPQY
Sbjct: 194 INGLKEQIESAKELINEVISGKRLV--SETNSYAQPTYPSTNNWSQAGQQPPLQQQQPQY 253

Query: 293 -XXXXXXXXXXXXXXXXXXXXXXVGSWDQANQSTIQPSEQSTGYDYYGQQSHVGSA-PPY 352
                                  V SWDQ+NQST+QPS+QSTGY+YYGQQS VGSA PPY
Sbjct: 254 GYAPGTYPPPPGPQYYSTYPPTQVASWDQSNQSTMQPSDQSTGYNYYGQQSQVGSAPPPY 313

Query: 353 HSYAYGQSASTGTXXXXXXXXXXXXXXXXXXXXQFHPD-DQQSMYLNSGGAPPAVPSTNG 412
             Y+YGQ AS+GT                    Q  P  DQQ+MYLNSG APPA+PSTNG
Sbjct: 314 QDYSYGQPASSGT-----HGYDQSYSQQAPSYGQIPPSYDQQNMYLNSGSAPPALPSTNG 373

Query: 413 T-EGTYPGAAYQVSNGQPMANPLSGYWTYPSDTTQLLPQAGNDPSESYPPQPMYEXXXXX 472
           T EGTYP AAYQ S         +GYWTY +D TQ LPQ GND S SY            
Sbjct: 374 TSEGTYPTAAYQAS---------TGYWTYQTDPTQSLPQTGNDQSGSYQTVSGGHAQPPV 433

Query: 473 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLGVEPSGDGNSNGAQSLSPAVQETGNSES 500
                  XXXXXXXXXXXXXXXXXXXXXXX   VE S DGN N  Q+L+P VQET NSES
Sbjct: 434 YGQSVYPXXXXXXXXXXXXXXXXXXXXXXXXXXVETSEDGNLNSGQNLAPTVQETANSES 477

[Close]
BLAST of Carg22048 vs. TrEMBL
Match: tr|A0A2P4N278|A0A2P4N278_QUESU (Far upstream element-binding protein 1 OS=Quercus suber OX=58331 GN=CFP56_23695 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 2.4e-76
Identity = 220/452 (48.67%), Postives = 257/452 (56.86%), Query Frame = 0 

Query: 13  DSNKRKLEQNIQLAKLKAQEIVAKLVSDAESKRPRFDYESPATAPAPQNPPLPSSSFPVS 72
           D  KRK+E++IQLAK KAQEI A+LV  AESKRPR D +S   AP   +  +P  SFPVS
Sbjct: 18  DGTKRKMEEDIQLAKQKAQEIAARLVGSAESKRPRLD-DSSELAPLSSSASIP--SFPVS 77

Query: 73  SGTQTGPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSL 132
             +QT  Y G Q TSK+I+IP  KVG+IIGKGGETIKYLQLQSGAKIQIT+D EADP SL
Sbjct: 78  FASQTAQYHGLQGTSKRISIPNGKVGVIIGKGGETIKYLQLQSGAKIQITKDAEADPYSL 137

Query: 133 TRDVELMGTS--XXXXXXXXXXXXXXXXXXXXXXXXXXXVIRIQNAINHFLVRTPT---- 192
           TRDVEL GTS                             +  +Q     F ++ P     
Sbjct: 138 TRDVELTGTSEQISRAEQLIKDVIAETDTGASAPSPNQGLNIMQPGAEQFSMKVPNTKVA 197

Query: 193 --------------------LQIIPLHLPPGDTSTERTVYINGLKEQIESAKELINEVIN 252
                               +QIIPLHLPPGDTSTERT+YINGL EQI+SAKELIN+VIN
Sbjct: 198 LLIGKGGETIRTMQSKSGARIQIIPLHLPPGDTSTERTIYINGLTEQIDSAKELINDVIN 257

Query: 253 GKRLVNASETTSYAQPTYPPPNNWSQAGQPPLQQPQYXXXXXXXXXXXXXXXXXXXXXXV 312
           GKR+VN S   SY QP YPP                 XXX                   V
Sbjct: 258 GKRIVNPSGANSYMQPAYPPXXXXXXXXXXXXXXXXXXXXYGYPYNTTSAYYGNYTTAQV 317

Query: 313 GSWDQANQSTIQPSEQSTGYDYYGQQSHVGSAPPYHSYAYGQSASTGTXXXXXXXXXXXX 372
             WD +NQS  QPS+QSTGY YY QQ HVGSAPP  SY+YG       XXXXXXXXXXXX
Sbjct: 318 AGWDHSNQSMSQPSQQSTGYGYYAQQGHVGSAPPNPSYSYGXXXXXXXXXXXXXXXXXXX 377

Query: 373 XXXXXXXXQFHPDDQQSMYLNSGGAPPAV---PSTNGTEGTYPGAAYQVSNGQPMANPLS 432
           XXXXXXXX     +QQ     SG  PPAV   P+   ++ T+P + Y  +  QP+A+P +
Sbjct: 378 XXXXXXXXXXXXIEQQK---QSGYGPPAVSTQPNGTPSQTTHPSSTYPPAYSQPVADPQA 437

Query: 433 GYWTYPSDTTQLLPQAGNDPSESYP--PQPMY 434
           GYW YPS T Q   Q      ++ P   QP+Y
Sbjct: 438 GYWAYPSSTGQAPAQTAQQGVQAPPLSTQPVY 463

[Close]
BLAST of Carg22048 vs. TrEMBL
Match: tr|A0A2N9EXB9|A0A2N9EXB9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7367 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.7e-74
Identity = 194/409 (47.43%), Postives = 225/409 (55.01%), Query Frame = 0 

Query: 1   MKD-SDDGEELHSDS---NKRKLEQNIQLAKLKAQEIVAKLVSDAESKRPRFDYESPATA 60
           MKD  +D ++ HS+S    KRK+E+NIQLAK KAQEI A+LV +AESKRPR D  S    
Sbjct: 1   MKDEQEDHKDSHSESVEGTKRKMEENIQLAKQKAQEIAARLVGNAESKRPRLDDSSEL-- 60

Query: 61  PAPQNPPLPSSSFPVSSGTQTGPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQLQSG 120
            AP +    + SFPVS   QT  Y G Q +SKKI+IP  KVG+IIGKGGETIKYLQLQSG
Sbjct: 61  -APLSSSASNPSFPVSFAFQTAQYHGLQGSSKKISIPNGKVGVIIGKGGETIKYLQLQSG 120

Query: 121 AKIQITRDFEADPQSLTRDVELMGTS--XXXXXXXXXXXXXXXXXXXXXXXXXXXVIRIQ 180
           AKIQIT+D EADP S++RDVEL GTS                             +  +Q
Sbjct: 121 AKIQITKDAEADPYSVSRDVELTGTSEQVSRAEQLIKDVIAETDTGASAPSPNPGLSSMQ 180

Query: 181 NAINHFLVRTPT------------------------LQIIPLHLPPGDTSTERTVYINGL 240
                F ++ P                         +QIIPLHLPPGDTSTERT+YINGL
Sbjct: 181 PGAEQFTMQVPNNKVALLIGKGGETIRTMQSKSGARIQIIPLHLPPGDTSTERTIYINGL 240

Query: 241 KEQIESAKELINEVINGKRLVNASETTSYAQPTYPPPNNWSQAGQPPLQQ---PQYXXXX 300
            EQIESAKELIN+VI+GKRL+N S   SY Q  YPPP NW+ AGQP +QQ   PQY    
Sbjct: 241 TEQIESAKELINDVISGKRLINPSGANSYMQQAYPPPGNWAPAGQPLMQQQQPPQYGYTQ 300

Query: 301 XXXXXXXXXXXXXXXXXXVGSWDQANQSTI-QPSEQSTGYDYYGQQSHVGSAPPYHSYAY 360
                              G WD  NQST+ QPS+QSTGYDYY QQ HVGSAPP  SY  
Sbjct: 301 PGTYQTPSSYYGNYPAQVAG-WDHTNQSTMSQPSQQSTGYDYYAQQGHVGSAPPNPSYXX 360

Query: 361 GQSASTGTXXXXXXXXXXXXXXXXXXXXQFHPDDQQSMYLNSGGAPPAV 376
                                       Q  P +QQ  Y+ SG  PPAV
Sbjct: 361 XXXQG---------YSQQPPQYEQNISSQPQPIEQQKPYVTSGYGPPAV 396

[Close]
BLAST of Carg22048 vs. TrEMBL
Match: tr|A0A2P6PMU1|A0A2P6PMU1_ROSCH (Putative K domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6g0259341 PE=4 SV=1)

HSP 1 Score: 256.9 bits (655), Expect = 9.3e-65
Identity = 216/481 (44.91%), Postives = 254/481 (52.81%), Query Frame = 0 

Query: 3   DSDDGEELHSDSNKRKLEQ----NIQLAKLKAQEIVAKLVSDAESKRPRFDYESPATAPA 62
           D D   E  SDS KRKLE     +I LAK KAQEI A+LV++AESKRPR D ES      
Sbjct: 4   DKDRQPETASDSAKRKLEDPAAISILLAKQKAQEIAARLVTNAESKRPRVDDES-----F 63

Query: 63  PQNPPLPSSSFPVSSGTQTGPYRGFQTTSKKINIPTMKVGLIIGKGGETIKYLQLQSGAK 122
             NP     ++PV +  QTG   G   TSKKI+IP  KVG+IIGK GETI+ LQLQSGAK
Sbjct: 64  QPNPVYTPPAYPVFT-AQTGHSYG-SGTSKKIDIPNGKVGVIIGKQGETIRQLQLQSGAK 123

Query: 123 IQITRDFEADPQSLTRDVELMGTS--XXXXXXXXXXXXXXXXXXXXXXXXXXXVIRIQNA 182
           IQITRD EAD  SLTRDVEL GTS                                +Q  
Sbjct: 124 IQITRDSEADLNSLTRDVELTGTSEQISRAEQLINDVIAEADAGGSAPSTNQGFNSMQPG 183

Query: 183 INHFLVRTPT------------------------LQIIPLHLPPGDTSTERTVYINGLKE 242
              F+++ P                         +QI+PLHLPPGD STER+VYING +E
Sbjct: 184 GEQFVMKVPNNKVALIIGKGGETIRNMQTKSGARIQIVPLHLPPGDMSTERSVYINGGQE 243

Query: 243 QIESAKELINEVINGKRLVNASETTSY-AQPTYPPPNNWSQAGQPPLQQPQ----YXXXX 302
           QIE+AKEL+NEVI+GKRL+NAS   SY  QP+YPP  NW+  GQPP+QQ Q    Y    
Sbjct: 244 QIEAAKELVNEVISGKRLLNASGANSYMQQPSYPPSGNWAPPGQPPIQQQQPHYGYTQPG 303

Query: 303 XXXXXXXXXXXXXXXXXXVGSWDQANQSTIQPSEQSTGYDYYGQQSHVGSAPPYHSYAYG 362
                                WDQ+NQ   QP + S+GY+YYGQQ  +GSAPP   Y Y 
Sbjct: 304 GYGTPPAPPSYYGNYPAQAAGWDQSNQVPSQPPQDSSGYNYYGQQPPMGSAPPNPGY-YN 363

Query: 363 QSAS------------------------TGTXXXXXXXXXXXXXXXXXXXXQFHPDDQQS 421
           Q++                            XXXXXXXXXXXXXXXXXXXX         
Sbjct: 364 QTSQGYAQQPPNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ 423

The following BLAST results are available for this feature:
BLAST of Carg22048 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022952410.16.1e-19384.03far upstream element-binding protein 2-like isoform X1 [Cucurbita moschata][more]
XP_022952411.15.0e-17982.13far upstream element-binding protein 1-like isoform X2 [Cucurbita moschata][more]
XP_023554288.14.2e-17879.66far upstream element-binding protein 1-like [Cucurbita pepo subsp. pepo][more]
XP_022972343.11.3e-17478.33far upstream element-binding protein 2-like [Cucurbita maxima][more]
XP_023530085.11.6e-13264.71far upstream element-binding protein 1-like [Cucurbita pepo subsp. pepo][more]
BLAST of Carg22048 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G25970.13.6e-3842.50KH domain-containing protein[more]
AT4G10070.17.8e-1733.17KH domain-containing protein[more]
AT1G33680.12.3e-1327.59KH domain-containing protein[more]
BLAST of Carg22048 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q96AE4|FUBP1_HUMAN3.2e-0435.66Far upstream element-binding protein 1 OS=Homo sapiens OX=9606 GN=FUBP1 PE=1 SV=... [more]
sp|Q91WJ8|FUBP1_MOUSE7.2e-0454.35Far upstream element-binding protein 1 OS=Mus musculus OX=10090 GN=Fubp1 PE=1 SV... [more]
sp|Q32PX7|FUBP1_RAT7.2e-0453.19Far upstream element-binding protein 1 OS=Rattus norvegicus OX=10116 GN=Fubp1 PE... [more]
BLAST of Carg22048 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K828|A0A0A0K828_CUCSA2.2e-12759.59RNA-binding protein Nova-1 OS=Cucumis sativus OX=3659 GN=Csa_7G074890 PE=4 SV=1[more]
tr|A0A1S3BZ71|A0A1S3BZ71_CUCME4.0e-10858.54far upstream element-binding protein 2-like OS=Cucumis melo OX=3656 GN=LOC103495... [more]
tr|A0A2P4N278|A0A2P4N278_QUESU2.4e-7648.67Far upstream element-binding protein 1 OS=Quercus suber OX=58331 GN=CFP56_23695 ... [more]
tr|A0A2N9EXB9|A0A2N9EXB9_FAGSY1.7e-7447.43Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7367 PE=4 SV=1[more]
tr|A0A2P6PMU1|A0A2P6PMU1_ROSCH9.3e-6544.91Putative K domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr6... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR004088KH_dom_type_1
IPR036612KH_dom_type_1_sf
IPR004087KH_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg22048-RACarg22048-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 16..36
NoneNo IPR availableCOILSCoilCoilcoord: 207..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 447..499
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 326..431
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 326..499
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 187..316
NoneNo IPR availablePANTHERPTHR10288:SF171F17H15.1/F17H15.1coord: 21..146
NoneNo IPR availablePANTHERPTHR10288:SF171F17H15.1/F17H15.1coord: 144..170
coord: 187..316
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 144..170
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 21..146
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 148..221
score: 11.49
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 85..145
score: 14.257
NoneNo IPR availableCDDcd00105KH-Icoord: 142..221
e-value: 2.35566E-11
score: 58.7255
NoneNo IPR availableCDDcd00105KH-Icoord: 87..149
e-value: 1.75127E-12
score: 62.1923
IPR004087K Homology domainSMARTSM00322kh_6coord: 142..226
e-value: 0.0012
score: 28.1
coord: 84..141
e-value: 1.1E-5
score: 34.9
IPR036612K Homology domain, type 1 superfamilyGENE3DG3DSA:3.30.1370.10coord: 80..144
e-value: 3.9E-17
score: 63.7
IPR036612K Homology domain, type 1 superfamilyGENE3DG3DSA:3.30.1370.10coord: 145..229
e-value: 4.6E-14
score: 53.8
IPR036612K Homology domain, type 1 superfamilySUPERFAMILYSSF54791Eukaryotic type KH-domain (KH-domain type I)coord: 141..228
IPR036612K Homology domain, type 1 superfamilySUPERFAMILYSSF54791Eukaryotic type KH-domain (KH-domain type I)coord: 80..146
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 88..146
e-value: 3.8E-13
score: 49.0