ClCG02G005660 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG02G005660
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Far upstream element-binding protein 3
Location	CG_Chr02 : 6174198 .. 6186503 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAGCCCTACCACCGTTCGTAACAAACCCCTCACCAGGCCTCCACTCCCGGCCGCGCCATTTCCCTTTTTCCAACACCACACTGAATTTTGAAACCCCCTTTCACTCTCTCCGGATTTTCCTTCATTCCGACCGCCATGAAAGACCATGAGGATGGCGAAGAGCTTCACTCCGACACCAACAAGCGCAAGCTCGAAGAGAATATTCAATTGGCTAAGCAAAAAGCTCAGGAAATCGTTGCTAAGCTAGTTAGCAATGCCGAGTCCAAACGCCCTCGCTTTGAGTACGAATCCCCTGCTGTTGCCTCTACCCCACAAAACCCACCATTATCCTCTTCCACATTTCCTGGTAAGCCATAGAAATATCTTCAATTCCTTTGCATCTAGGGCTTTTTTTTTTTTTTTTTTTCTTTTTTTCTTTTTCTCTTTTAAGAAAGAAATTAGGTTAATGTAATGTTCTGCTTGTCTATTTTTATGTTTTTTGAGTTGAGTTCTTTCTTTAACTCATTTGTGGTTGGATTTAGACTACTTTGATAGCTTAGAATTATGGCTAAGTTGGGTATATGGATAGAAGATTAACTTGTTTGATTTGTTGGACAAAAGGGAATCGGAGTGGGCCTTTATGGAGTCCTCTGGGCACCGAGAGGAGTCATTTTGTGAAACAAAAGGGTAGTTTTTGTGATGGAAGTTGTAAGAAGCTTTCTCACAGTCTGTCAAATCAAATTTTGTTGGGTGACATCTATTCATCGGCCACCTTATCCAAGGGTTCAGAAATCAATTTTGGAGAGAATTATGGAGTTTGTACCAATTAGAACCCTATGGTGTAGGCAGACTTCTTATTGTAGTCGTTAGATTTCCAGTGCTGTACTGTCTGCTAGAAAATTGGGGCGTTGATGAAAATGAAATTCTCTCTTTATGGGAACTTATGGTTTGATGCAAATGAAAATTTTCCTTTCACGTTTAACAATAGGTTGTGCCATGTTTTTTCTTCTTTTTTTTTTTTTTTTTTTTTTTGGGAACGGAAACGGAACTTTTCATTGATATAAAGAAAAGAGCAATAGCTCAATTACAAAGAAACAAAATATCCAAAAAAGTAAATGAGGATCAATAGGTGCACCTGGACATCTCAACTAGGTTAATACCCCCATAGCACCTCATCATATCCAATTCAAGATGTAAGAAATACAGGAAATCAAAGAGTACAATCATAGTAAGATGCTTGATTACGTAGAGAAAATAAATGCCTCCCAATTCAAACAAATGTCTTGAATAGAGTAATCTTCAAAAAACTTGGATTGCAAACTCCAAGAAGAAGCTAAAAGACGAGTTGATCCCCATCCATTTGGCCAATCTTTAGATGTATCATGAAAAACACGCTGATTGCCCTCAAACCAAAGCTCAGAAACCAAGGCTTTAACAACATTTGACCAAAGAAGTTGAGCTCTAGATGGAAGAAGAGGACCGACCAATAACTGCTGTAAATTCTCCCTTGCTGAAATCCTAAGAACCCAATGCACATTGAAGCATTCAAATAGTTTCCACCAACAATTTCTTGAAACAGAACAGTCAATAATAGGTGTTGGATATCTTCCCCATTAGCTGAACATAGAGAGCAAATTGATGGTGATAAACATTTGTTCTGCAGCTTATGTTGCAGTGTAGAAGAGCAATTTAGATAACCATAGAGCAAAATCCAAGTCAAAATATTAATTCTCTTGGGACTTTTTGATTTCCAAAGAGTTTTAAAACACACCTTATCAGTTGGAGAAGAAACAATCAAATATATATATATTTTTAATATCCATGAGTGTCGGGGCCAGTTTACGCACACCTCGACTAATCTCACGGGACAACCCGCCTAACCCTACAACATTTGGGTGTTAAGGAAACTCATAGGAAATTAATTTCTAGGTAGCAGGCTACCATGGATTGAATCCTTGACCTCTTAGTCATTTATTGAGATTATGTTTCTTTTTTACCACTAGGCCAACCCATGATGGTTAGAAGCAATCAAATATTTTGACAAAGATTTCATTGAGTACCTTCTTGAATTATCCAAAGACCACAATCTCGAGTCTTGTAATGAAGAAATTCTGCTATCTTCAATTTTACTAAGAAGCTGTTGCACTTCACAAATTTCCTCTTCCTTGAGCTGCTTACGAAGAAATAAATTCCAGGATCCAGTAACCAAATTCCAATGATTGTTGACACTACCCTTTGGATAAGAAGCAATTCTGAAAAGCCTCGGGAAGCAATCTTTTAGAGGGATTTCAGTACACCACAAATCTGTCCAAAAGAAAATCTGCCTTCCATTACCCAGCTTGAATTTTGCAAGGTAGCCAAAATTGCTCCATGTTTTTGAGATACTGATCCAAGGGCTTCCAAGGCTTAAACCAAACGTACCAAAACTATGCCAAAGATGTGGGTGAACACCCTGTATGCTTTTCACAATTTTGCACCAAAGAGAATCATTTTCTTAAGGAACCTCCAATTCCATTTGAATAACAAAGCTGTATTTCTGTTTTTCAGATTACCAATCCCAATACCTCCATCATTTAGAGATTTGGAAGCTAAGTCCCATTTCCTTCCCAAAAAAACTTGCATAAAATTCTCTCCAACTCCAATATTACTGAGCTAGGCATTTGAAATATTGACATATAATAAGTGGGAAGATTGGCCAAGACTGCATTACATAAAGTTAAACGACGTCCCTGCACAAATTATATCTTTTCCATCCATCAAGCTTAAGATGGACTTTATCAATAATGGGCTGCCAAAAGGAGTGTTGTTTTGGGTATCCACCATGGGGAAGGCCAAGATAAATGAAGGGCAGTTTACCACCTTTACAATTTAGCCTTCTAGTATTTGAGAGCACCAAGTATTGACACCGTATAATGCAAGATTTTTTCAAGTTCACTTGCTGCCTTCAACACCACTCAAAAAATCCGATTGTTTGAATTAGAATGTCCAGCATAGCATCATTGTTTTTGCAAAAAAGTAGTGCCATGTTTTTTCAACTTGGCCTTAAACTAGGGCATCTTTTGGATCAATCTTGCTCATGTTTTGTGATCATTTCAAGCATTTATGGGAGAGAGAAAACTGGTTGGTACACAAAAGGCAGCTGATTTCTTTCATAAGGAACCAAAACTTGAGGAAAAGAATGAAAGAACGGAAGGGTAACAAAAAAGAACTTGCTCACAAAAGGAAGTCTCGCTAAAGAAAGGTACTCAAATTAAGTAAAATAAGACCTAACAAATAGTTAAAAGAATTTGAAGGGATACATCGAACCTAGCGAGGGACCAGACATCACATGGGCCCATCTCCACTCTACAGTTTCTATTGTTCCTTTCTCCACAAACCCCACAACATTGCACAAACTCGGCTTGCCACCAAAACCTCCCTTGTTATTGAAACGGCAAATGGAGAAGTAACTTCTTGATCATCTTCCTGTAATCTTGGTGTCTGAAAACGTAAAAGAAAAACGCATCAAAAGAAGTAAGGGATGTGAAACTCAAAGAAGTTCTCAACTATATTTCCTAATGCCTCAAAGATTTAGCCTTAAATAATAAGACAGCCATGTTAAAACACTTCAACCGATAGTAACTTGACATATAAAGACTACAACTTAAGTAATCACAACTATGGCTGTAAATAAAAGACATTAAGGCAATAACCTCAAGAACTTGAAGTCAATAACTAAAGGCAATAGCTACATCAATAACTCCAAACAAACGGTCAAAGTTGTAGCTCCAAAGGATATTATCCGGGTCTTCTTGTGCCTTCGGTTAATAATGCAACAAATTGACCCGATCAAAGCAAGTAGCTTCCTCAAGATCTAATTGAAAGTATTTACTCGTTTGCCAAACAAAAAATTTTACCTTCTTTGAATTGTCACCTTCCACGGAGACGAGAAAACAGATTCACTAAAAGGAGAATGGTTGAACAAGCAGTGAAAGAATGAACTATGGTAGGACTGCAAAGTCAAACGCCCATTCTCCCCGGTCTTAGATCAAACTTCTCAAACAGTGATAAGAGAGCTATATCTTGTCATTTCCCCATTGGACAACAAACGACGAAAACCAAGCGATAAAGGAGAGCTCCAAAATGAACAAAGACATCAACCATAAAATGATTTTGCATAGGAGTCAAATGATATAAATGGGGCAGAGGGGTCTATCCTTACCCACTTATCCTCCCAGAAGTACGTTTCCTTTCCATAACCCTGGAACAGTTGACCAAGTGAGGAAAAGAAGAGAGCTCATTGGAGCTTAATTCATAGTGGAAGCCCCCTTGTTAGTCTATAGTGAAGCTAGGGGTGCAAGAGAAAAATTGAAAAATCAAAAAACCTATTAAACCGACTCAAACGACTGTCGGTTTGGTTATTGAAATAAGAAAAATTGAAAGTATTTGGTCGATTGTAGGTTTAGCATGTCTGAACTGAATGTGCCTGAACCAACTGATTATATAATACACACACACATTGTTAAATTGTATTTTGAATTTCAAAACACCCTGTTGGTATACCTAGTTTCAAACATGCCCTTTAACCTCCAGGTCTTTGTGTTCGATTCCAGCAAGTATATATTGAGGTATATATTATTGATTTTCCTCTGTCCAATACAAGCCATGTTCTAAGCCCAGCCCACATGCCACAATAGTTATCCAAATGGGGAATTGCTAGACCAAGTTGACTAAACCACCAAATTGTCGGTTTTGAGTAGTTTGGTTGTGTATCTTTACGGTTTTGATTTGGCTTTTGGATTTCATTAATAAATAATGTAGTTCGATTTTGGTTTGACACTCAAACTAACCCAAACCAAACTGCTTACACCTTAAATGAAACTAAGTAGTCACTTGGGAAGGTTTTCCTTCATTAAGATCAAGAATGGTTGAAGACCTCCTTTTTGGTTGATGTTTCGGTAGTATAGGAGCTACTCACAATCTGAATTTGCGAATAATGCAAATTATCCATGTAGTTAGTAACAACAAGAAATTGGTTAGAAGAATCGAAAATTTTGAGGTTTCGACAGGATGACGATAGAAGAATATGGAACATTTAGATTTCAGATAACTTCTTGTTGGAGACTTTGTTCCAAAGCCTGATTGTAGGTTGTTTTCTTCTTCATAAAGCACTCACTCTTGCAATAAAGAGGAATAACACTGGCCCAAAAATGTGGAACTCTTTGTGTGGACCCTTTGCTTGCTGTCCTTCCATTCAAACTGGTGCAATTTATGTACAAATACAAAGGAGAGTTGAAATCATATCGTTGAACTCACATCTTCTTTCACTGCCAATTTACAAGGAGTTGCTGGAACTTCATCTGTGAGGGCTTCAATCTACATTTTTCCTTCCATTCAACTACAACTAAAACATGTCATAATTGGTGTGCGAAGATCCTTAACATTATTGAGGTAGGCTTATGGGTTTTATGAACAGAGTGAAACAATAGGGTTCAACGACAAAATTAGAAGGTGGGTAGATGTTATAGAGCTAGCAAAGAGAAATTGTTCCTGTTGGATTTCCTAAACACCTTCATGTAGTTCAGACAAGGAATATCTGTTTCTTTATTCGACAAAAAAAGCATAGTAGTTTAAAAAAATAATGTAAATGACTCTTCAATTTGAGGTTGTATATTGTACAATCTTTCTGTGTTCGTCACTGAAAATCCTTTATTTCTTTTCCTTTTTTTCTATGTTTGCTTGTCTACAATAATGGATTGTGCAACACTTCTTAAGTTCTTAGAGGTATGACTATGACAATGATGTGGTCTCAATTCTATATTTATTGTCTGTTGAGATTCTTTTTTGGCATGTTTTCTATGGCATGTGCTTAATAATTCTGATTTTACAAACCATGAAGTAGATATTCATTTATTTTCATACTCAAATAACTTTGCTTCATTTTGTGTTCACTTCTTGCATTAAGACATGTCAACATGCTTTGGCATTCTTGAGATTCACACTGCTTTTTGTATTCTTTAAATACTGAACTTAGCTACACTTTTTCAGTTGAAAAGAGACAAATTTCCCATGCTAGATTTTGCTAACTTTCTAGTGTTCAGTTTCTTCTGGTACTCAAGCAGGTCCATATCATGGTTTTCAAACCACGAGTAAGAAAATAAATATTCCAAATATTAAGGTACTTGGTTTTGCCATCTTGTTTGTCAGATAGATTACCATTTGACTACTGTTGACAAAGGTGATTTTTCCCCCCCAAATCTGTTTGTAGGTCGGATTGATTATTGGGAAAGGTGGAGAAACAATCAAATACCTTCAACTTCAATCAGGGGCTAAAATCCAGATCACTAGAGATTTTGAAGCTGATCCACAGTCTTTGACTAGGGACGTTGAATTAATGGGCACTTCAGAACAAGTTAGCAGGGCAGAACAGCTTATCAATGAAGTAATTGCGGAGGTAAAGCACTGATTAGAATGCTACCATTGTTAACTTTTGTGTTGGAGATGTGAAGCTAATTTAGGCACCTCAATGTTACAGGCAGATTCAGGGGGTTCTGCCTCAACCACAAATCAGGCAATGAACTCAACTCAACCTGGAGTTGAGCAGTTTGTAATGAAGATTCCTAATAATAAGGTAATTGCTTTCGTTGTGTTTTTATCTACCCTTGAAGGTAAATCTAATATTATGATAATAATTTTGTTTATAGGTTGCACTTGTCATTGGGAAGGGAGGTGAAACTATAAAGAGCATACAGAGCAAGTCAGCTGCTCGTGTCCAGGTATTATTTAACTCATGGGAACTAGAGACTTCTGAACTGTTTCCAAAGCCATTATTGCAGGACAAAAACAGCCAACAGTCTCTTAAATTAGCAAGTGAGAAGGAATATTACTGTTCGAATCTGTTTAGTTTAGTTAGATTTGTAACCTTGACTTGTCAGAATTGCTCCTTCTTTTCTCTCTTCAGCTTGTGATAGAAATTAGTGGACTTAAAGGTAGAAAGATCTCCATCTCATCGTTCTGCCATCTTAGTTTCCTTAACTCTGTTTATCCCCCACCCAAAAGAGTGCAGACGGGTTTGTATTTGAAAAATGACAACAAAATTGCGTAACCGTCTTAGCCCCCTTAGGACAATACTATATGGCTCATTGCACTGTTCATGTTGTTCTCTTAATACTAGATGTGCTTTTGCTTCGTCATGTGGAACCCAATATGAAAGGGCATGCCGGATATCTTATTCCGGAATGCTATTTAATCATTTTACAGATTATCCCTTTGCACCTTCCTCCTGGAGATACATCGACCGAGAGAAGCGTTTATATTAATGGGCTGAAGGAGCAGATTGAGTCAGCCAAAGAATTGATTAACGAAGTAATAAGTGGGGTAAGTCATCACTCATCACGTACCTGTATTGCCTTCGCATTATCATCAGGGAGAATGATTTCCTTTTCTAATTCTTAAAATCCTAAATGGAGCATGAGGAAAAAACATCTGAACCGTCAATTTTCTGGCTCTACTAATTTTCTGTTGAGTTTCTGTTGTTCGTTTAATTGTTATATTAAATATCTGGTGCCTGATTGAAATCTGGAGCGTGCATGAAAATTCAAAGTACGTCTATCTACCTTTGGTCCAATTAATTTAAAGCCACTATTTTTGTATCATTTATTTAGTACCTCTAACTAATGGATCTACTGATTTGCTTTATATAATTTTCTTGGCAAGTGTTTTTGAACATTTGGCTCATGTTCTAGCTAAGTTCAACTGCAAATCGTTCTTGTATCCCTCAATAAAAGTGTTGAGACTTATTTCATTTTTGAAGAGATTGGCATACACTTCGATAGACTGCTGGATTTTGAATGTTGGTTATCTTTAAGACATATACTCCCCTTCTTGCAGAAACGTCTGGTATCTGAAACCACTAGCTATGCGCAACCAACTTACCCTCCTACCAACAATTGGTCTCAAGCTGGACAACCTCCATTGCAGCAGCAGCAGCCTCCTCAATATGGATATGCACCAGGAACCTATCCCCCGCCGCCGGGGCCTCCTTATTATAGCAACTATCCAACTCAAGTAGGAAGCTGGGATCAGGCGAACCAATTGACCGTTCAGCCATCAGACCAAAATACAGGATATAATTATTATGGCCAACAGTCTCAGGCTGGGTCGGCTCCTCCTCCATATCATGACTATAGCTATGGTCAGCCAGCCTCAACTGGCACTCATGGTTATGATCAGAGCTACTCCCAACAGGCACCAAGTTATGGCCAAAATTTCTCAGGCCAGATTCCACCAAGTTATGATCAGCAGAACATGTACCTTAACTCAGGAGGTGCACCACCTGCTTTGCCATCAACAAATGGAACCTCTGAAGCTACATATCCCAATGCAGCATACCAAGTTTCCACTGGGTACTGGACTTACCCGAGTGACCCGACCCAATCGCTTCCTCAGGCAGGAAATGACCAGTCTGGATCTTATCAAACCGCGCAACCTCCTGTGTATGGGCAGAGTGTGTACCCTCCTCCACCAGGCATGTATTCTCAGGGAGTAACCCCCTCGGCTCAGGTGACGGTGACCCAAACCCAATCACAACCACCACCAGTTCATGGAGTTGAAACATCTGGAGACAGGAATTCGAGCTTAGCTCCTACAGTGCAGGAAACTGCCAATTCAGAAAGTTAACCATGGGGTGGATCGCGTGTAGTTTATTGAAAGCTATTTTGGTTCTTCGTGCATTTTTTATAACTGATATAGATATATTTTGATAGCCATTTTAGAACCTCTGTAATGAATTTCACTCATCAAATGCGAATTTACTATCCTTTTCTATTCATATTATTGGATGCAGATATGAAAAAGAAGGATTGACAAGCAGTTCAAATATTTGCTACAGAAAATTTACAACTGTTGAGCATGGGGAGTGTGCGTGTATGGTGATAGACAAATTATACAGAAAGCACTTGTGAAAGGTGATATCAATAAAACCCCAAACCAGAGAGAAGCTATATATAGGAACAGATGGATTGACTGACTCGGTTCACAATTCTATTGATAAACCTCTATCGAATGGCCTCAGGATCTCTCCAATAGATCCAATCTTCACGGTGCAAGCGTGTGCTACAATGTGTGTTTTACTCCTTTCAATCCTATTAACAATTACATTGCATAGACAACTTCTCCACTGCTGTCGATATCGAGATCAAGATCAGGATCACTCTCTTCGTCGTCCTCCATGTCGTCATCGATATCAAGGCTGCCAGTAAGGTATTGGTTGAGGCTCTGTGTCCCGGCAGCAGGAAGGCCAGCTTCAGCTATTATCTGCATGATTTCTTCACTGGTTTGCATTGGTTGATCAGGCTCTTCGTATTGGTTATTCATTGCCCTTTCGTCTACGAGATCGGCTGGAAGATTCTTCAGAAACCACTCATGATTCCTTATCTCCGGAATTGTAATCCTCTATTCCAGGTAATTTTAGTTAATATTGAACCATATCAAAATGGAACTTTATCTACCATTTAGAAAGGAATGTGAAACAAGATTCTAAAGTCTAACCTTAGTTGGGTCGGCAACAAAAATCCTAGAGATCAGATGACGACACTCGGGAGAGATAAGAACATAATCGGGAATTGAGTACTGTACATTCAGGATTCGCTGCAATAAACAATCAAAAGTTTTAGCCAAAAAGGAAAATATATATTTGACTCAAACTATAGATTCAGAGCTAGTGTGACTATTTACCTGAATTGTTTTGCGGAAGTTTTTTGGGTCCTCGGGGTCCTCAAAGGGGTATGCACCAACCAACATGACATATAAAGTCACCCCACATGACCACACGTCTGCAATCTGAAATGCACCGTCGATAGAGCCGAAAAAGAGAAAAAAAAAATCTCAACCTTGAAACACATCACAAGATAGAACGGCATATTGATGCGTATATACAACATCTTGTAACTTGAGGTAGAAAATGGGATAGCCATAACATTACCTTGCCATCATACTCTTTCTTAAGTAACACCTCAGGAGCAATATATGCAGGGGTGCCAACCGTTGATTTTGGTTGTGAATGCAGCACAGAAGACTGAAAGGAAGACACCAAATCAGAATGTGCAAGCAAAAGAAGATAGAAATATATGCAAATCCAGTTGAACCAACTAAATTTTCTATTCAACAACGAGCATCAAGTAAAACACACGATATGTAGTGGGAATGTTTATTATTGTCAAAAGTATACAAGGTCAGACAACCTTGAAATTTAAGACCCTATAAGATGGGTATCTAACATAATTCACGATCACGGAAGCATTTGCAGAGCAGAAACACGAGAAGTCAGGTCTACCTTCGAGTATCCGAAATCACAAATCTTCAAACGAGGAGCAGGACTTCCATCCAGCAATGTATTCTCCAATTTCAAATCACGATGACATACTTGCTGCAGAAAATGAGTAAATGATAACAATTACTTGAATTTCTGTATTTCTAGCAATGACTTGCGATTCTGAGAGCACAAAAGAAATGATAAAGACACCGAATCGAAATTATTTATATACCATTGCATGACAATAGCTGACACCAGATATAAGTTGCTGGAAGAAGAAACGTGCCTGCAGATCAATATAGCTTAACTCAGTAGATGGTAGGAGGTTCTGAATCAAGAATGATAATGCACCTAAAAGAAACCTCATCCTCGCTGAACCGCCCGGCATTGCAGATCCGTTCAAAGAGCTCTCCTCCAGATGCATATTCCATCACAATTGCAAGATGAGTCGGGGTCAAGATCACCTGTTTCCATGTCATACATCAGATGAAAACATTCTGCCTGGATGAGGATGAAGCCGAATTTAAGGATAAAGCAAACCTCTTTGAATCTGACAATGTTAGGATGCCTTAAAGATCTGTGGTTTATTATCTCCCGCTTCACGTTCGCATCTATCTGTCAAATGGAATGGAACTGGTAAATCACCATTTGATGAATAATTTTGATTAAATATTGTATACATTTTCTTACATGTTGTCACTAAACTAACCCTGTTGCTAGCACCCTTTTTTCCCCCCTAAATCGAATTGCATATCTATCAAAAATTAACCTACATATTTACAAAATATGGTATTGGTCATTTTTTAACTCTCAGAAAGTACTCTTGGGCGAGCTAGGCTCAATGAAATCTTTGTCTTGTACCTTTTTGCATTAAATTCATATAATTAAAACTAAATTTTCAGATACTGTGCTCAAGACAACCCCCCTCAGATAACATGAGCATAACTCAAAGATTAAGCCATTTCCTCACCTCCACACGTGTTGTAATATTCTAAAAAATAATACTAATAATTTATACTTGAAATTCATATATACCAATGTTAAATTATCCAACATTTATATCATATAGGTATGACATTTCCATGTTCTTTGTCATTTAAGTGATTTAAATTCAAATCTTAAGTCTGTTGTTTTTTCAATGTTAACGTACAACATTCTTTTGTCACACTAAATATCACAACCCGTATAAATTCATTAGACGGAAATGGTAGACTTAGAAGATTAGAAATGAGATTGAAAAATATCAACAAACATATAATCGTAATCCATAAGAAACAAAGCTTCAGGAGTCTATATTAGACTATAATAGTACAAAGAACTACACGCCCTTCTCTCAAATCAACAACAAGAACAAAAGAAAACCATCTCCCAGCAATTCTACAAATCTAAACACAAGAAACATGTAAAATGTATACCGTTAGAAGCAGGTTCAGAGTTGTTCAGCCTAATTCACCAAAATCAAAGAAAGTGTAGAACAATCCTCACTCAAATTCAGAGAAATTTGCAGAGATAAAACACAATAATAACAATGGCAGTTACCAGCTGACTAACCTTCTCACCTCTCTCGATGTACTTGACGGCAACGAGCTCCCCGGTTTGCTTATCTCTCATCAATCTGGCAATCCCGAAGTTTCCAGAGCCAATGTCGCGCACAAGCTCATAACGATCGCTATCGTGCATGATCGGAATGTCCATTCCCGGTCCAACAGTGAGTGCCGACCGATCCATGTCTTGTGGCAAATTATATGAATGGGTTCGTAGCAAACAAATTCCCGAAGCAATACGTAAAAGAAAAGGGGAAAAAGAAATCGAGAAGGAAGAAGAAAGAAATTGATTGATGTGGCGAGAGGAGAGCCAGTGAAATGGAAGGAAGAACAGAGCACGTGAAAGTTCACCAAACCTACTGGCCTTATCAACAGGAGAAATTATTATAAATCACACTGAGAAAATTCCTTTATATCTGTCTCCTTCAAATATAAAAAATAAAATCGGGGTTTCTAGGGTTTCTGGAAAGAGGCGGTGGATTGATGGGA

mRNA sequence

AAAAAGCCCTACCACCGTTCGTAACAAACCCCTCACCAGGCCTCCACTCCCGGCCGCGCCATTTCCCTTTTTCCAACACCACACTGAATTTTGAAACCCCCTTTCACTCTCTCCGGATTTTCCTTCATTCCGACCGCCATGAAAGACCATGAGGATGGCGAAGAGCTTCACTCCGACACCAACAAGCGCAAGCTCGAAGAGAATATTCAATTGGCTAAGCAAAAAGCTCAGGAAATCGTTGCTAAGCTAGTTAGCAATGCCGAGTCCAAACGCCCTCGCTTTGAGTACGAATCCCCTGCTGTTGCCTCTACCCCACAAAACCCACCATTATCCTCTTCCACATTTCCTGTTTCTTCTGGTACTCAAGCAGGTCCATATCATGGTTTTCAAACCACGAGTAAGAAAATAAATATTCCAAATATTAAGGTCGGATTGATTATTGGGAAAGGTGGAGAAACAATCAAATACCTTCAACTTCAATCAGGGGCTAAAATCCAGATCACTAGAGATTTTGAAGCTGATCCACAGTCTTTGACTAGGGACGTTGAATTAATGGGCACTTCAGAACAAGTTAGCAGGGCAGAACAGCTTATCAATGAAGTAATTGCGGAGGCAGATTCAGGGGGTTCTGCCTCAACCACAAATCAGGCAATGAACTCAACTCAACCTGGAGTTGAGCAGTTTGTAATGAAGATTCCTAATAATAAGGTTGCACTTGTCATTGGGAAGGGAGGTGAAACTATAAAGAGCATACAGAGCAAGTCAGCTGCTCGTGTCCAGCTTGTGATAGAAATTAGTGGACTTAAAGGTAGAAAGATCTCCATCTCATCGTTCTGCCATCTTAGTTTCCTTAACTCTGTTTATCCCCCACCCAAAAGAGTGCAGACGGATGTGCTTTTGCTTCGTCATGTGGAACCCAATATGAAAGGGCATGCCGGATATCTTATTCCGGAATGCTATTTAATCATTTTACAGATTATCCCTTTGCACCTTCCTCCTGGAGATACATCGACCGAGAGAAGCGTTTATATTAATGGGCTGAAGGAGCAGATTGAGTCAGCCAAAGAATTGATTAACGAAGTAATAAGTGGGAAACGTCTGGTATCTGAAACCACTAGCTATGCGCAACCAACTTACCCTCCTACCAACAATTGGTCTCAAGCTGGACAACCTCCATTGCAGCAGCAGCAGCCTCCTCAATATGGATATGCACCAGGAACCTATCCCCCGCCGCCGGGGCCTCCTTATTATAGCAACTATCCAACTCAAGTAGGAAGCTGGGATCAGGCGAACCAATTGACCGTTCAGCCATCAGACCAAAATACAGGATATAATTATTATGGCCAACAGTCTCAGGCTGGGTCGGCTCCTCCTCCATATCATGACTATAGCTATGGTCAGCCAGCCTCAACTGGCACTCATGGTTATGATCAGAGCTACTCCCAACAGGCACCAAGTTATGGCCAAAATTTCTCAGGCCAGATTCCACCAAGTTATGATCAGCAGAACATGTACCTTAACTCAGGAGGTGCACCACCTGCTTTGCCATCAACAAATGGAACCTCTGAAGCTACATATCCCAATGCAGCATACCAAGTTTCCACTGGGTACTGGACTTACCCGAGTGACCCGACCCAATCGCTTCCTCAGGCAGGAAATGACCAGTCTGGATCTTATCAAACCGCGCAACCTCCTGTGTATGGGCAGAGTGTGTACCCTCCTCCACCAGGCATGTATTCTCAGGGAGTAACCCCCTCGGCTCAGGTGACGGTGACCCAAACCCAATCACAACCACCACCAGTTCATGGAGTTGAAACATCTGGAGACAGGAATTCGAGCTTAGCTCCTACAGTGCAGGAAACTGCCAATTCAGAAAGTTAACCATGGGGTGGATCGCGTGTAGTTTATTGAAAGCTATTTTGGTTCTTCGTGCATTTTTTATAACTGATATAGATATATTTTGATAGCCATTTTAGAACCTCTGTAATGAATTTCACTCATCAAATGCGAATTTACTATCCTTTTCTATTCATATTATTGGATGCAGATATGAAAAAGAAGGATTGACAAGCAGTTCAAATATTTGCTACAGAAAATTTACAACTGTTGAGCATGGGGAGTGTGCGTGTATGGTGATAGACAAATTATACAGAAAGCACTTGTGAAAGGTGATATCAATAAAACCCCAAACCAGAGAGAAGCTATATATAGGAACAGATGGATTGACTGACTCGGTTCACAATTCTATTGATAAACCTCTATCGAATGGCCTCAGGATCTCTCCAATAGATCCAATCTTCACGGTGCAAGCGTGTGCTACAATGTGTGTTTTACTCCTTTCAATCCTATTAACAATTACATTGCATAGACAACTTCTCCACTGCTGTCGATATCGAGATCAAGATCAGGATCACTCTCTTCGTCGTCCTCCATGTCGTCATCGATATCAAGGCTGCCAGTAAGGTATTGGTTGAGGCTCTGTGTCCCGGCAGCAGGAAGGCCAGCTTCAGCTATTATCTGCATGATTTCTTCACTGGTTTGCATTGGTTGATCAGGCTCTTCGTATTGGTTATTCATTGCCCTTTCGTCTACGAGATCGGCTGGAAGATTCTTCAGAAACCACTCATGATTCCTTATCTCCGGAATTGTAATCCTCTATTCCAGTTGGGTCGGCAACAAAAATCCTAGAGATCAGATGACGACACTCGGGAGAGATAAGAACATAATCGGGAATTGAGTACTGTACATTCAGGATTCGCTGAATTGTTTTGCGGAAGTTTTTTGGGTCCTCGGGGTCCTCAAAGGGGTATGCACCAACCAACATGACATATAAAGTCACCCCACATGACCACACGTCTGCAATCTTGCCATCATACTCTTTCTTAAGTAACACCTCAGGAGCAATATATGCAGGGGTGCCAACCGTTGATTTTGGTTGTGAATGCAGCACAGAAGACTGAAAGGAAGACACCAAATCAGAATGTGCAAGCAAAAGAAGATAGAAATATATGCAAATCCAGTTGAACCAACTAAATTTTCTATTCAACAACGAGCATCAAGTAAAACACACGATATGTAGTGGGAATGTTTATTATTGTCAAAAGTATACAAGGTCAGACAACCTTGAAATTTAAGACCCTATAAGATGGGTATCTAACATAATTCACGATCACGGAAGCATTTGCAGAGCAGAAACACGAGAAGTCAGGTCTACCTTCGAGTATCCGAAATCACAAATCTTCAAACGAGGAGCAGGACTTCCATCCAGCAATGTATTCTCCAATTTCAAATCACGATGACATACTTGCTGCAGAAAATGAGTAAATGATAACAATTACTTGAATTTCTGTATTTCTAGCAATGACTTGCGATTCTGAGAGCACAAAAGAAATGATAAAGACACCGAATCGAAATTATTTATATACCATTGCATGACAATAGCTGACACCAGATATAAGTTGCTGGAAGAAGAAACAAACCTCATCCTCGCTGAACCGCCCGGCATTGCAGATCCGTTCAAAGAGCTCTCCTCCAGATGCATATTCCATCACAATTGCAAGATGAGTCGGGGTCAAGATCACCTGTTTCCATCTGACAATGTTAGGATGCCTTAAAGATCTGTGGTTTATTATCTCCCGCTTCACGTTCGCATCTATCTGTCAACTCTCTCGATGTACTTGACGGCAACGAGCTCCCCGGTTTGCTTATCTCTCATCAATCTGGCAATCCCGAAGTTTCCAGAGCCAATGTCGCGCACAAGCTCATAACGATCGCTATCGTGCATGATCGGAATGTCCATTCCCGGTCCAACAGTGAGTGCCGACCGATCCATGTCTTGTGGCAAATTATATGAATGGGTTCGTAGCAAACAAATTCCCGAAGCAATACGTAAAAGAAAAGGGGAAAAAGAAATCGAGAAGGAAGAAGAAAGAAATTGATTGATGTGGCGAGAGGAGAGCCAGTGAAATGGAAGGAAGAACAGAGCACGTGAAAGTTCACCAAACCTACTGGCCTTATCAACAGGAGAAATTATTATAAATCACACTGAGAAAATTCCTTTATATCTGTCTCCTTCAAATATAAAAAATAAAATCGGGGTTTCTAGGGTTTCTGGAAAGAGGCGGTGGATTGATGGGA

Coding sequence (CDS)

ATGAAAGACCATGAGGATGGCGAAGAGCTTCACTCCGACACCAACAAGCGCAAGCTCGAAGAGAATATTCAATTGGCTAAGCAAAAAGCTCAGGAAATCGTTGCTAAGCTAGTTAGCAATGCCGAGTCCAAACGCCCTCGCTTTGAGTACGAATCCCCTGCTGTTGCCTCTACCCCACAAAACCCACCATTATCCTCTTCCACATTTCCTGTTTCTTCTGGTACTCAAGCAGGTCCATATCATGGTTTTCAAACCACGAGTAAGAAAATAAATATTCCAAATATTAAGGTCGGATTGATTATTGGGAAAGGTGGAGAAACAATCAAATACCTTCAACTTCAATCAGGGGCTAAAATCCAGATCACTAGAGATTTTGAAGCTGATCCACAGTCTTTGACTAGGGACGTTGAATTAATGGGCACTTCAGAACAAGTTAGCAGGGCAGAACAGCTTATCAATGAAGTAATTGCGGAGGCAGATTCAGGGGGTTCTGCCTCAACCACAAATCAGGCAATGAACTCAACTCAACCTGGAGTTGAGCAGTTTGTAATGAAGATTCCTAATAATAAGGTTGCACTTGTCATTGGGAAGGGAGGTGAAACTATAAAGAGCATACAGAGCAAGTCAGCTGCTCGTGTCCAGCTTGTGATAGAAATTAGTGGACTTAAAGGTAGAAAGATCTCCATCTCATCGTTCTGCCATCTTAGTTTCCTTAACTCTGTTTATCCCCCACCCAAAAGAGTGCAGACGGATGTGCTTTTGCTTCGTCATGTGGAACCCAATATGAAAGGGCATGCCGGATATCTTATTCCGGAATGCTATTTAATCATTTTACAGATTATCCCTTTGCACCTTCCTCCTGGAGATACATCGACCGAGAGAAGCGTTTATATTAATGGGCTGAAGGAGCAGATTGAGTCAGCCAAAGAATTGATTAACGAAGTAATAAGTGGGAAACGTCTGGTATCTGAAACCACTAGCTATGCGCAACCAACTTACCCTCCTACCAACAATTGGTCTCAAGCTGGACAACCTCCATTGCAGCAGCAGCAGCCTCCTCAATATGGATATGCACCAGGAACCTATCCCCCGCCGCCGGGGCCTCCTTATTATAGCAACTATCCAACTCAAGTAGGAAGCTGGGATCAGGCGAACCAATTGACCGTTCAGCCATCAGACCAAAATACAGGATATAATTATTATGGCCAACAGTCTCAGGCTGGGTCGGCTCCTCCTCCATATCATGACTATAGCTATGGTCAGCCAGCCTCAACTGGCACTCATGGTTATGATCAGAGCTACTCCCAACAGGCACCAAGTTATGGCCAAAATTTCTCAGGCCAGATTCCACCAAGTTATGATCAGCAGAACATGTACCTTAACTCAGGAGGTGCACCACCTGCTTTGCCATCAACAAATGGAACCTCTGAAGCTACATATCCCAATGCAGCATACCAAGTTTCCACTGGGTACTGGACTTACCCGAGTGACCCGACCCAATCGCTTCCTCAGGCAGGAAATGACCAGTCTGGATCTTATCAAACCGCGCAACCTCCTGTGTATGGGCAGAGTGTGTACCCTCCTCCACCAGGCATGTATTCTCAGGGAGTAACCCCCTCGGCTCAGGTGACGGTGACCCAAACCCAATCACAACCACCACCAGTTCATGGAGTTGAAACATCTGGAGACAGGAATTCGAGCTTAGCTCCTACAGTGCAGGAAACTGCCAATTCAGAAAGTTAA

Protein sequence

MKDHEDGEELHSDTNKRKLEENIQLAKQKAQEIVAKLVSNAESKRPRFEYESPAVASTPQNPPLSSSTFPVSSGTQAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAMNSTQPGVEQFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQLVIEISGLKGRKISISSFCHLSFLNSVYPPPKRVQTDVLLLRHVEPNMKGHAGYLIPECYLIILQIIPLHLPPGDTSTERSVYINGLKEQIESAKELINEVISGKRLVSETTSYAQPTYPPTNNWSQAGQPPLQQQQPPQYGYAPGTYPPPPGPPYYSNYPTQVGSWDQANQLTVQPSDQNTGYNYYGQQSQAGSAPPPYHDYSYGQPASTGTHGYDQSYSQQAPSYGQNFSGQIPPSYDQQNMYLNSGGAPPALPSTNGTSEATYPNAAYQVSTGYWTYPSDPTQSLPQAGNDQSGSYQTAQPPVYGQSVYPPPPGMYSQGVTPSAQVTVTQTQSQPPPVHGVETSGDRNSSLAPTVQETANSES

Homology

[Close]

BLAST of ClCG02G005660 vs. Swiss-Prot
Match: FUBP2_HUMAN (Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP PE=1 SV=4)

HSP 1 Score: 97.4 bits (241), Expect = 5.3e-19
Identity = 68/207 (32.85%), Postives = 103/207 (49.76%), Query Frame = 1


Query: 16  KRKLEENIQLAKQKAQEIVAKLVSNAESKRPRFEYESPAV----ASTPQNPPLSSSTFPV 75
           K    + +Q A+Q A +I     +   +  P F +            P++  L+S    +
Sbjct: 71  KDAFADAVQRARQIAAKIGGDAATTVNNSTPDFGFGGQKRQLEDGDQPESKKLASQGDSI 130

Query: 76  SSGTQAGPYHGFQTTS--KKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADP 135
           SS  Q GP H    TS  ++  +P+  VGLIIG+GGE I  +Q  SG K+QI+ D    P
Sbjct: 131 SS--QLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP 190

Query: 136 QSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAMNSTQPGVEQFVMKIPNN 195
           +   R V L G  E V +A+ +++++++    GG     +   N  Q G  Q +M IP  
Sbjct: 191 E---RSVSLTGAPESVQKAKMMLDDIVSRG-RGGPPGQFHDNANGGQNGTVQEIM-IPAG 250

Query: 196 KVALVIGKGGETIKSIQSKSAARVQLV 217
           K  LVIGKGGETIK +Q ++  ++ L+
Sbjct: 251 KAGLVIGKGGETIKQLQERAGVKMILI 270

HSP 2 Score: 77.0 bits (188), Expect = 7.4e-13
Identity = 47/146 (32.19%), Postives = 81/146 (55.48%), Query Frame = 1


Query: 74  GTQAGPYH-----GFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEAD 133
           G   G +H     G   T ++I IP  K GL+IGKGGETIK LQ ++G K+ + +D  + 
Sbjct: 217 GGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQD-GSQ 276

Query: 134 PQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAMNSTQPGVEQFVMKIPN 193
             ++ + + ++G   +V +A +++ +++ E D GG     N+  +    G++   + +P 
Sbjct: 277 NTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGD-RNEYGSRIGGGID---VPVPR 336

Query: 194 NKVALVIGKGGETIKSIQSKSAARVQ 215
           + V +VIG+ GE IK IQ+ +  R+Q
Sbjct: 337 HSVGVVIGRSGEMIKKIQNDAGVRIQ 357

HSP 3 Score: 67.8 bits (164), Expect = 4.5e-10
Identity = 41/138 (29.71%), Postives = 66/138 (47.83%), Query Frame = 1


Query: 90  INIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQVSRAE 149
           + +P   VG++IG+ GE IK +Q  +G +IQ  +D    P+ +     +MG  ++   A 
Sbjct: 327 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKI---AHIMGPPDRCEHAA 386

Query: 150 QLINEVIAEADSGGSASTTNQAM------------NSTQPGVEQFVMKIPNNKVALVIGK 209
           ++IN+++    SG         M            N   PG E     IP +K  LVIG+
Sbjct: 387 RIINDLLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGGE-MTFSIPTHKCGLVIGR 446

Query: 210 GGETIKSIQSKSAARVQL 216
           GGE +K+I  ++ A V++
Sbjct: 447 GGENVKAINQQTGAFVEI 460

HSP 4 Score: 42.0 bits (97), Expect = 2.6e-02
Identity = 18/46 (39.13%), Postives = 27/46 (58.70%), Query Frame = 1


Query: 185 KIPNNKVALVIGKGGETIKSIQSKSAARVQLVIEISGLKGRKISIS 231
           ++P+  V L+IG+GGE I  IQ  S  +VQ+  +  GL  R +S++
Sbjct: 150 RVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLT 195

[Close]

BLAST of ClCG02G005660 vs. Swiss-Prot
Match: FUBP2_RAT (Far upstream element-binding protein 2 OS=Rattus norvegicus GN=Khsrp PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 1.2e-18
Identity = 67/205 (32.68%), Postives = 100/205 (48.78%), Query Frame = 1


Query: 16  KRKLEENIQLAKQKAQEIVAKLVSNAESKRPRFEYESPAVASTPQNPPLSSSTFPV--SS 75
           K    + +Q A+Q A +I     +   +  P F +          + P S        S 
Sbjct: 72  KDAFADAVQRARQIAAKIGGDAATTVNNNTPDFGFGGQKRQLEDGDQPDSKKLASQGDSI 131

Query: 76  GTQAGPYHGFQTTS--KKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQS 135
           G+Q GP H    TS  ++  +P+  VGLIIG+GGE I  +Q  SG K+QI+ D    P+ 
Sbjct: 132 GSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE- 191

Query: 136 LTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAMNSTQPGVEQFVMKIPNNKV 195
             R V L G  E V +A+ +++++++    GG     +   N  Q G  Q +M IP  K 
Sbjct: 192 --RSVSLTGAPESVQKAKMMLDDIVSRG-RGGPPGQFHDNANGGQNGTVQEIM-IPAGKA 251

Query: 196 ALVIGKGGETIKSIQSKSAARVQLV 217
            LVIGKGGETIK +Q ++  ++ L+
Sbjct: 252 GLVIGKGGETIKQLQERAGVKMILI 271

HSP 2 Score: 77.4 bits (189), Expect = 5.7e-13
Identity = 47/146 (32.19%), Postives = 81/146 (55.48%), Query Frame = 1


Query: 74  GTQAGPYH-----GFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEAD 133
           G   G +H     G   T ++I IP  K GL+IGKGGETIK LQ ++G K+ + +D  + 
Sbjct: 218 GGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQD-GSQ 277

Query: 134 PQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAMNSTQPGVEQFVMKIPN 193
             ++ + + ++G   +V +A +++ +++ E D GG     N+  +    G++   + +P 
Sbjct: 278 NTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGD-RNEYGSRVGGGID---VPVPR 337

Query: 194 NKVALVIGKGGETIKSIQSKSAARVQ 215
           + V +VIG+ GE IK IQ+ +  R+Q
Sbjct: 338 HSVGVVIGRSGEMIKKIQNDAGVRIQ 358

HSP 3 Score: 67.4 bits (163), Expect = 5.9e-10
Identity = 41/138 (29.71%), Postives = 66/138 (47.83%), Query Frame = 1


Query: 90  INIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQVSRAE 149
           + +P   VG++IG+ GE IK +Q  +G +IQ  +D    P+ +     +MG  ++   A 
Sbjct: 328 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKI---AHIMGPPDRCEHAA 387

Query: 150 QLINEVIAEADSG------------GSASTTNQAMNSTQPGVEQFVMKIPNNKVALVIGK 209
           ++IN+++    SG            G         N   PG E     IP +K  LVIG+
Sbjct: 388 RIINDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGE-MTFSIPTHKCGLVIGR 447

Query: 210 GGETIKSIQSKSAARVQL 216
           GGE +K+I  ++ A V++
Sbjct: 448 GGENVKAINQQTGAFVEI 461

HSP 4 Score: 42.0 bits (97), Expect = 2.6e-02
Identity = 18/46 (39.13%), Postives = 27/46 (58.70%), Query Frame = 1


Query: 185 KIPNNKVALVIGKGGETIKSIQSKSAARVQLVIEISGLKGRKISIS 231
           ++P+  V L+IG+GGE I  IQ  S  +VQ+  +  GL  R +S++
Sbjct: 151 RVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLT 196

[Close]

BLAST of ClCG02G005660 vs. Swiss-Prot
Match: FUBP2_MOUSE (Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp PE=1 SV=2)

HSP 1 Score: 96.3 bits (238), Expect = 1.2e-18
Identity = 67/205 (32.68%), Postives = 100/205 (48.78%), Query Frame = 1


Query: 16  KRKLEENIQLAKQKAQEIVAKLVSNAESKRPRFEYESPAVASTPQNPPLSSSTFPV--SS 75
           K    + +Q A+Q A +I     +   +  P F +          + P S        S 
Sbjct: 72  KDAFADAVQRARQIAAKIGGDAATTVNNNTPDFGFGGQKRQLEDGDQPDSKKLASQGDSI 131

Query: 76  GTQAGPYHGFQTTS--KKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQS 135
           G+Q GP H    TS  ++  +P+  VGLIIG+GGE I  +Q  SG K+QI+ D    P+ 
Sbjct: 132 GSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE- 191

Query: 136 LTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAMNSTQPGVEQFVMKIPNNKV 195
             R V L G  E V +A+ +++++++    GG     +   N  Q G  Q +M IP  K 
Sbjct: 192 --RSVSLTGAPESVQKAKMMLDDIVSRG-RGGPPGQFHDNANGGQNGTVQEIM-IPAGKA 251

Query: 196 ALVIGKGGETIKSIQSKSAARVQLV 217
            LVIGKGGETIK +Q ++  ++ L+
Sbjct: 252 GLVIGKGGETIKQLQERAGVKMILI 271

HSP 2 Score: 77.4 bits (189), Expect = 5.7e-13
Identity = 47/146 (32.19%), Postives = 81/146 (55.48%), Query Frame = 1


Query: 74  GTQAGPYH-----GFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEAD 133
           G   G +H     G   T ++I IP  K GL+IGKGGETIK LQ ++G K+ + +D  + 
Sbjct: 218 GGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQD-GSQ 277

Query: 134 PQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAMNSTQPGVEQFVMKIPN 193
             ++ + + ++G   +V +A +++ +++ E D GG     N+  +    G++   + +P 
Sbjct: 278 NTNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGD-RNEYGSRVGGGID---VPVPR 337

Query: 194 NKVALVIGKGGETIKSIQSKSAARVQ 215
           + V +VIG+ GE IK IQ+ +  R+Q
Sbjct: 338 HSVGVVIGRSGEMIKKIQNDAGVRIQ 358

HSP 3 Score: 67.4 bits (163), Expect = 5.9e-10
Identity = 41/138 (29.71%), Postives = 66/138 (47.83%), Query Frame = 1


Query: 90  INIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQVSRAE 149
           + +P   VG++IG+ GE IK +Q  +G +IQ  +D    P+ +     +MG  ++   A 
Sbjct: 328 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKI---AHIMGPPDRCEHAA 387

Query: 150 QLINEVIAEADSG------------GSASTTNQAMNSTQPGVEQFVMKIPNNKVALVIGK 209
           ++IN+++    SG            G         N   PG E     IP +K  LVIG+
Sbjct: 388 RIINDLLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGGE-MTFSIPTHKCGLVIGR 447

Query: 210 GGETIKSIQSKSAARVQL 216
           GGE +K+I  ++ A V++
Sbjct: 448 GGENVKAINQQTGAFVEI 461

HSP 4 Score: 42.0 bits (97), Expect = 2.6e-02
Identity = 18/46 (39.13%), Postives = 27/46 (58.70%), Query Frame = 1


Query: 185 KIPNNKVALVIGKGGETIKSIQSKSAARVQLVIEISGLKGRKISIS 231
           ++P+  V L+IG+GGE I  IQ  S  +VQ+  +  GL  R +S++
Sbjct: 151 RVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLT 196

[Close]

BLAST of ClCG02G005660 vs. Swiss-Prot
Match: FUBP1_HUMAN (Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1 PE=1 SV=3)

HSP 1 Score: 87.4 bits (215), Expect = 5.5e-16
Identity = 69/207 (33.33%), Postives = 103/207 (49.76%), Query Frame = 1


Query: 26  AKQKAQEIVAKLVSNAES------------KRPRFEYESP-AVASTPQNPPLSSSTFPVS 85
           A Q+A++I AK+  +A +            KRP  + + P A    PQN          S
Sbjct: 34  ALQRARQIAAKIGGDAGTSLNSNDYGYGGQKRPLEDGDQPDAKKVAPQND---------S 93

Query: 86  SGTQAGPYHGFQTTS---KKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADP 145
            GTQ  P H  Q+ S   ++  +P+  VG IIG+GGE I  +Q +SG KIQI  D    P
Sbjct: 94  FGTQLPPMHQQQSRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP 153

Query: 146 QSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAMNSTQPGVEQFVMKIPNN 205
           +   R   L GT E V  A++L+++++   + G  A   +   +   PG     + IP +
Sbjct: 154 E---RSCMLTGTPESVQSAKRLLDQIV---EKGRPAPGFH---HGDGPGNAVQEIMIPAS 213

Query: 206 KVALVIGKGGETIKSIQSKSAARVQLV 217
           K  LVIGKGGETIK +Q ++  ++ ++
Sbjct: 214 KAGLVIGKGGETIKQLQERAGVKMVMI 222

HSP 2 Score: 75.9 bits (185), Expect = 1.7e-12
Identity = 44/136 (32.35%), Postives = 69/136 (50.74%), Query Frame = 1


Query: 90  INIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQVSRAE 149
           + IP   VG++IG+ GE IK +Q  +G +IQ   D    P+   R  ++ G  ++   A 
Sbjct: 280 VPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPE---RIAQITGPPDRCQHAA 339

Query: 150 QLINEVIAEADSG--------GSASTTNQAMNSTQP--GVEQFVMKIPNNKVALVIGKGG 209
           ++I +++    +G        G      Q   +  P  G+++F   +P  K  L+IGKGG
Sbjct: 340 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGG 399

Query: 210 ETIKSIQSKSAARVQL 216
           ETIKSI  +S AR++L
Sbjct: 400 ETIKSISQQSGARIEL 412

HSP 3 Score: 75.9 bits (185), Expect = 1.7e-12
Identity = 54/149 (36.24%), Postives = 78/149 (52.35%), Query Frame = 1


Query: 71  VSSGTQAGPYH---GFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEA 130
           V  G  A  +H   G     ++I IP  K GL+IGKGGETIK LQ ++G K+ + +D   
Sbjct: 168 VEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQD--- 227

Query: 131 DPQSLTRD--VELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAMNSTQPGVEQFVMK 190
            PQ+   D  + + G   +V +A++++ E+I   D GG     N+   S   G E   + 
Sbjct: 228 GPQNTGADKPLRITGDPYKVQQAKEMVLELI--RDQGGFREVRNE-YGSRIGGNEGIDVP 287

Query: 191 IPNNKVALVIGKGGETIKSIQSKSAARVQ 215
           IP   V +VIG+ GE IK IQ+ +  R+Q
Sbjct: 288 IPRFAVGIVIGRNGEMIKKIQNDAGVRIQ 310

HSP 4 Score: 55.5 bits (132), Expect = 2.3e-06
Identity = 33/79 (41.77%), Postives = 43/79 (54.43%), Query Frame = 1


Query: 78  GPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVE 137
           GP  G Q  +    +P  K GLIIGKGGETIK +  QSGA+I++ R+   +     +   
Sbjct: 371 GPPGGLQEFN--FIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNADPNMKLFT 430

Query: 138 LMGTSEQVSRAEQLINEVI 157
           + GT +Q+  A QLI E I
Sbjct: 431 IRGTPQQIDYARQLIEEKI 447

HSP 5 Score: 40.4 bits (93), Expect = 7.7e-02
Identity = 22/77 (28.57%), Postives = 36/77 (46.75%), Query Frame = 1


Query: 154 EVIAEADSGGSASTTNQAMNSTQPGVEQFVMKIPNNKVALVIGKGGETIKSIQSKSAARV 213
           +V  + DS G+         S     E++  K+P+  V  +IG+GGE I  IQ +S  ++
Sbjct: 77  KVAPQNDSFGTQLPPMHQQQSRSVMTEEY--KVPDGMVGFIIGRGGEQISRIQQESGCKI 136

Query: 214 QLVIEISGLKGRKISIS 231
           Q+  +  GL  R   ++
Sbjct: 137 QIAPDSGGLPERSCMLT 151

[Close]

BLAST of ClCG02G005660 vs. Swiss-Prot
Match: FUBP2_CHICK (Far upstream element-binding protein 2 OS=Gallus gallus GN=KHSRP PE=1 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.2e-15
Identity = 60/178 (33.71%), Postives = 91/178 (51.12%), Query Frame = 1


Query: 42  ESKRPRFEYESPAVASTPQNPP--LSSSTFPVSS-GTQAGPYHG---FQTTSKKINIPNI 101
           E   P  +   P  A   + PP  L+    P ++   Q GP H      T +++  +P+ 
Sbjct: 159 ERSGPVGDPPGPPRAERGRRPPPALTGGALPSAALPPQLGPMHPPPRSTTVTEEYRVPDG 218

Query: 102 KVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEV 161
            VGLIIG+GGE I  +Q  SG K+QI+ D    P+   R V L G+ E V +A+ +++++
Sbjct: 219 MVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPE---RSVSLTGSPEAVQKAKLMLDDI 278

Query: 162 IAEADSGGSASTTNQAMNSTQPGVEQFVMKIPNNKVALVIGKGGETIKSIQSKSAARV 214
           ++    G      + A  + Q G  Q +M IP  K  LVIGKGGETIK +Q ++  ++
Sbjct: 279 VSRGRGGPPGQFHDYA--NGQNGTVQEIM-IPAGKAGLVIGKGGETIKQLQERAGVKM 330

HSP 2 Score: 76.6 bits (187), Expect = 9.7e-13
Identity = 46/145 (31.72%), Postives = 80/145 (55.17%), Query Frame = 1


Query: 74  GTQAGPYHGFQT----TSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADP 133
           G   G +H +      T ++I IP  K GL+IGKGGETIK LQ ++G K+   +D  +  
Sbjct: 281 GGPPGQFHDYANGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMIFIQD-GSQN 340

Query: 134 QSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAMNSTQPGVEQFVMKIPNN 193
            ++ + + ++G   +V +A +++ +++ E D GG     N+  +    G++   + +P +
Sbjct: 341 TNVDKPLRIIGDPYKVQQACEMVMDILRERDQGGFGD-RNEYGSRIGGGID---VPVPRH 400

Query: 194 KVALVIGKGGETIKSIQSKSAARVQ 215
            V +VIG+ GE IK IQ+ +  R+Q
Sbjct: 401 SVGVVIGRSGEMIKKIQNDAGVRIQ 420

HSP 3 Score: 65.9 bits (159), Expect = 1.7e-09
Identity = 40/138 (28.99%), Postives = 65/138 (47.10%), Query Frame = 1


Query: 90  INIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQVSRAE 149
           + +P   VG++IG+ GE IK +Q  +G +IQ  +D    P+ +     +MG  E+   A 
Sbjct: 390 VPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGPEKI---AHIMGPPERCEHAA 449

Query: 150 QLINEVIAEADS------------GGSASTTNQAMNSTQPGVEQFVMKIPNNKVALVIGK 209
           ++IN+++    S            GG      Q +     G  +    IP +K  LVIG+
Sbjct: 450 RIINDLLQSLRSGPPGPPGHGMPPGGRGRGRGQGIWGPPGG--EMTFSIPTHKCGLVIGR 509

Query: 210 GGETIKSIQSKSAARVQL 216
           GGE +K+I  +  A V++
Sbjct: 510 GGENVKAINQQRGAFVEI 522

HSP 4 Score: 46.6 bits (109), Expect = 1.1e-03
Identity = 28/79 (35.44%), Postives = 40/79 (50.63%), Query Frame = 1


Query: 78  GPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVE 137
           GP  G  T S    IP  K GL+IG+GGE +K +  Q GA ++I+R    +     +   
Sbjct: 483 GPPGGEMTFS----IPTHKCGLVIGRGGENVKAINQQRGAFVEISRQLPPNGDPNFKLFI 542

Query: 138 LMGTSEQVSRAEQLINEVI 157
           + G+ +Q+  A+Q I E I
Sbjct: 543 IRGSPQQIEHAKQPIEEKI 557

HSP 5 Score: 42.0 bits (97), Expect = 2.6e-02
Identity = 18/46 (39.13%), Postives = 27/46 (58.70%), Query Frame = 1


Query: 185 KIPNNKVALVIGKGGETIKSIQSKSAARVQLVIEISGLKGRKISIS 231
           ++P+  V L+IG+GGE I  IQ  S  +VQ+  +  GL  R +S++
Sbjct: 214 RVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLT 259

[Close]

BLAST of ClCG02G005660 vs. TrEMBL
Match: A0A0A0K828_CUCSA (RNA-binding protein Nova-1 OS=Cucumis sativus GN=Csa_7G074890 PE=4 SV=1)

HSP 1 Score: 494.2 bits (1271), Expect = 2.2e-136
Identity = 250/313 (79.87%), Postives = 261/313 (83.39%), Query Frame = 1


Query: 278 LQIIPLHLPPGDTSTERSVYINGLKEQIESAKELINEVISGKRLVSETTSYAQPTYPPTN 337
           +QIIPLHLPPGDTSTERSVYINGLKEQIESAKELINEVISGKRLVSETTSYAQPTYP TN
Sbjct: 213 VQIIPLHLPPGDTSTERSVYINGLKEQIESAKELINEVISGKRLVSETTSYAQPTYPSTN 272

Query: 338 NWSQAGQPPLQQQQPPQYGYAPGTYPPPPGPPYYSNYPTQVGSWDQANQLTVQPSDQNTG 397
           NWSQAGQ P  QQQ PQYGYA GTYPPP GPPYYS YP QV SWDQ+NQ TVQPSDQ+TG
Sbjct: 273 NWSQAGQQPPLQQQQPQYGYAAGTYPPPQGPPYYSTYPAQVASWDQSNQSTVQPSDQSTG 332

Query: 398 YNYYGQQSQAGSAPPPYHDYSYGQPASTGTHGYDQSYSQQAPSYGQNFSGQIPPSYDQQN 457
           YNYYGQQSQ GSAPP +HDYSYGQPAS+GTHGYDQSYSQQAPSY     GQIPPSYDQQN
Sbjct: 333 YNYYGQQSQVGSAPPQFHDYSYGQPASSGTHGYDQSYSQQAPSY-----GQIPPSYDQQN 392

Query: 458 MYLNSGGAPPALPSTNGTSEATYPNAAYQVSTGYWTY-PSDPTQSLPQAGNDQSGSYQT- 517
           MYLNSG AP ALPS+NGTSE TYP AAYQ STGYWTY  +D TQSLPQ GNDQSGSYQT 
Sbjct: 393 MYLNSGSAPSALPSSNGTSEGTYPTAAYQASTGYWTYQTTDQTQSLPQTGNDQSGSYQTV 452

Query: 518 ----AQPPVYGQSVYPPPPGMYSQGVTPSAQVTVTQTQSQPPPVHGVETSGDRNS----S 577
               AQPPVYGQSVYPPPPG+YS    P  ++ V  TQSQPP    VETS D NS    +
Sbjct: 453 SGGHAQPPVYGQSVYPPPPGVYSAPAPPPPEM-VAPTQSQPP---SVETSEDGNSNSGQN 512

Query: 578 LAPTVQETANSES 581
           LAPTVQE ANSES
Sbjct: 513 LAPTVQENANSES 516

[Close]

BLAST of ClCG02G005660 vs. TrEMBL
Match: A0A0A0K828_CUCSA (RNA-binding protein Nova-1 OS=Cucumis sativus GN=Csa_7G074890 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 4.1e-111
Identity = 266/508 (52.36%), Postives = 301/508 (59.25%), Query Frame = 1


Query: 1   MKDHEDGEELHSDTNKRKLEENIQLAKQKAQEIVAKLVSNAESKRPRFEYESPAVASTPQ 60
           MKDH+D +ELHSDTNKRKLEENIQLAKQKAQEIVAKLVSNAESKRPRFEYE PA A  PQ
Sbjct: 1   MKDHDDADELHSDTNKRKLEENIQLAKQKAQEIVAKLVSNAESKRPRFEYEPPAPAPPPQ 60

Query: 61  NPPLSSSTFPVSSGTQAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQ 120
           NPPLSSSTF VSSGTQAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQ
Sbjct: 61  NPPLSSSTFTVSSGTQAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQ 120

Query: 121 ITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAMNSTQPGVE 180
           ITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQA+NS+QPGVE
Sbjct: 121 ITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAINSSQPGVE 180

Query: 181 QFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQLV--------------IEISGLKGRK 240
           QFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQ++              + I+GLK + 
Sbjct: 181 QFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQIIPLHLPPGDTSTERSVYINGLKEQI 240

Query: 241 ISISSFCH------------LSFLNSVY------------PPPKRVQTDVLLLRHVEPNM 300
            S     +             S+    Y            PP ++ Q          P  
Sbjct: 241 ESAKELINEVISGKRLVSETTSYAQPTYPSTNNWSQAGQQPPLQQQQPQYGYAAGTYPPP 300

Query: 301 KGHAGY-LIPECYLIILQIIPLHLPPGDTSTERSVYINGLKEQIESAKELINEVISGKRL 360
           +G   Y   P       Q     + P D ST  + Y  G + Q+ SA    ++       
Sbjct: 301 QGPPYYSTYPAQVASWDQSNQSTVQPSDQSTGYNYY--GQQSQVGSAPPQFHDY------ 360

Query: 361 VSETTSYAQPTYPPTNNWSQAGQPPLQQQQPPQYGYAPGTYPPPPGPPYYSNYPTQVGSW 420
                SY QP    T+ + Q+       QQ P YG  P +Y          + P+ + S 
Sbjct: 361 -----SYGQPASSGTHGYDQS-----YSQQAPSYGQIPPSYDQQNMYLNSGSAPSALPSS 420

Query: 421 DQANQLTVQPS--DQNTGYNYYGQQSQAGSAPPPYHDYSYGQPASTGTHGYDQSYSQQAP 468
           +  ++ T   +    +TGY  Y    Q  S P   +D S      +G H        Q P
Sbjct: 421 NGTSEGTYPTAAYQASTGYWTYQTTDQTQSLPQTGNDQSGSYQTVSGGHA-------QPP 475

HSP 2 Score: 295.0 bits (754), Expect = 1.9e-76
Identity = 236/594 (39.73%), Postives = 296/594 (49.83%), Query Frame = 1


Query: 1   MKDHEDGEE---LHSDTNKRKLEEN---IQLAKQKAQEIVAKLVSNAESKRPRFEYESPA 60
           MK+ +D  +      D+ KRKLE++   I+LAKQKAQEI A+LVS+AESKRPR E E P 
Sbjct: 1   MKEDQDQHQEATATGDSAKRKLEDSSFSIELAKQKAQEIAARLVSDAESKRPRLE-EEPF 60

Query: 61  VASTPQNPPLSSSTFPVSSGTQAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQ 120
             S   NPP     +PVS   Q+G  +G   TSKKI IPN KVG+IIGKGGETIK LQLQ
Sbjct: 61  QPSPVFNPP----PYPVSFTAQSGQSYGSPGTSKKITIPNGKVGVIIGKGGETIKQLQLQ 120

Query: 121 SGAKIQITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSA-STTNQAMN 180
           SGAKIQITRD EAD  SLTRDV+L GT EQ+SRAEQLI++VIAEAD+GGSA  +TNQ  N
Sbjct: 121 SGAKIQITRDSEADLSSLTRDVDLTGTFEQISRAEQLISDVIAEADAGGSAPPSTNQGFN 180

Query: 181 STQPGVEQFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQLVIEISGLKGRKISISSFC 240
           S QPG EQFVMK+PNNKVAL+IGKGGETI+++QSKS AR+Q+V     L    +S     
Sbjct: 181 SIQPGTEQFVMKVPNNKVALIIGKGGETIRNMQSKSGARIQVV--PLHLPPGDMSAERSV 240

Query: 241 HLSFLNSVYPPPKRVQTDVLLLRHVEPNMKGHAGYLIPECYLIILQIIPLHLPPGDTSTE 300
           +++ +       K +  +V+  + +  N  G   Y+              + PPG+ +  
Sbjct: 241 YINGVTEQIEAAKELVNEVISGKRL-VNTSGTNSYMQQS-----------YAPPGNWAPP 300

Query: 301 RSVYINGLKEQIESAKELINEVISGKRLVSETTSYAQP-----TYPPTN-NWSQAGQPPL 360
               I   +                    ++  SYA P      YP     W Q+ Q P 
Sbjct: 301 GQAPIQQQQPHYG---------------YTQPGSYAPPASYYGNYPTQGAGWDQSNQVP- 360

Query: 361 QQQQPPQ-------YGYAPGTYPPPPGPPYYSNYPTQVGSWDQANQLTVQPSDQNTGYNY 420
              QPPQ       YG  P     PP P Y  N    V S                GY+ 
Sbjct: 361 -SSQPPQESSAYNYYGQQPPMGSAPPNPSYNYNQTPPVAS---------------HGYDQ 420

Query: 421 -YGQQSQAGSAPPPYHDYSYGQPASTGTHGYDQSYSQQAPSYGQNFSGQIPPSYDQQNMY 480
            Y QQ       PP    SYGQ  S+   G DQ                       Q  Y
Sbjct: 421 GYAQQ-------PP----SYGQNISSQAPGSDQ-----------------------QQQY 480

Query: 481 LNSGGAPPALPST---NGTSEATYPNAAYQVSTGYWTYPSDPTQSLPQAG----NDQSGS 540
             SG  PPA+PS+   + +S++T P+AAY V      Y   P  S  QAG    + Q+G 
Sbjct: 481 ATSGYGPPAVPSSVDGSASSQSTQPSAAYPV-----PYSQPPANS--QAGYWQPHTQTGY 502

Query: 541 YQT--------------AQPPVYGQSVYP-PPPGMYSQGVTPSAQVTVTQTQSQ 552
           YQT              +Q  VYGQ  YP P P  Y + V P   ++     S+
Sbjct: 541 YQTSYGGQQAVEDPSAASQSAVYGQGGYPQPDPSHYGEAVNPPIIISFISRSSK 502

[Close]

BLAST of ClCG02G005660 vs. TrEMBL
Match: A0A0K9PWL1_ZOSMR (Far upstream element-binding protein OS=Zostera marina GN=ZOSMA_14G00930 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 6.7e-69
Identity = 209/579 (36.10%), Postives = 282/579 (48.70%), Query Frame = 1


Query: 21  ENIQLAKQKAQEIVAKLVSNAESKRPRFEYESPAVASTPQNPPLSSSTFPVSSGTQ---A 80
           ++IQLAKQ+AQEI A+L S AE+KRPR + +     S   + PL  +     +G     A
Sbjct: 53  DDIQLAKQRAQEIAARLFSAAEAKRPRVDGDVSGFGSDISHKPLGQAITSTQTGMNQPAA 112

Query: 81  GPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVE 140
            P +G+  +SKKI+IPN +VG+IIGKGGETIKYLQLQSGAKIQ+TRD +ADP S+TR VE
Sbjct: 113 YPSYGYSGSSKKIDIPNDRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPSSMTRLVE 172

Query: 141 LMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAMNSTQPGVEQFVMKIPNNKVALVIGK 200
           L GTSEQ+++AEQLI +V+AEA++GGS   T +     + G E  +MK+PNNKV LVIGK
Sbjct: 173 LTGTSEQITKAEQLITDVLAEAEAGGSGIVTARKFMGAEVGSEHVIMKVPNNKVGLVIGK 232

Query: 201 GGETIKSIQSKSAARVQLVIEISGLKGRKISISSFCHLSFLNSVYPPPKRVQTDVL---L 260
           GGETIKS+Q+ S AR+QL I +    G   S     H+          K++  +V+    
Sbjct: 233 GGETIKSMQATSGARIQL-IPLHPPPG-DTSTERTVHIDGTPEQIESAKQLINEVVSENR 292

Query: 261 LRHVEPNMKGHAGYLIPECYLIILQIIPLHLPPGDTSTERSVYINGLKEQIESAKELINE 320
            R+++       GY  P          P   PPG  + ++  Y   ++            
Sbjct: 293 PRNLQSGGYSQQGYRPPR---------PSWAPPGPPTMQQPAYGGYMQPGAYPG------ 352

Query: 321 VISGKRLVSETTSYAQPTYPPTNNWSQAGQPPLQQQQPPQYGYAPGTYPPPPGPPYYSNY 380
             +  + +S+      PT P T  +S  G  P   Q  P    APGT     G  YYS  
Sbjct: 353 --APPQYMSQPNYSGYPTAPTTAGYSSTGWDPSTNQ--PSQQTAPGT-----GYDYYS-- 412

Query: 381 PTQVGSWDQANQLTVQPSDQNTGYNYYGQQSQAGSAPPPYHDYSYGQPASTGTHGYDQSY 440
             Q G    +   +  P D   GY  YGQ     S PP     SY    + G++G    Y
Sbjct: 413 --QQGQQPPSQGGSTAPIDNTGGYTNYGQ-----SQPPS----SY---TTQGSYGEAAGY 472

Query: 441 SQQAPSYGQNFSG-------------------QIPPSYDQQNMYLNSGGAPPALPSTNGT 500
           SQQ P Y Q+ +G                      P YDQQ  Y  S     +  S+   
Sbjct: 473 SQQTPGYSQDGNGGSYQTSTQAQQGYTTNPPSSTQPGYDQQQSY--SSAQTYSQDSSAAP 532

Query: 501 SEATYPNA-AYQVSTGYWTYPSDPTQSLPQAGNDQSGSYQTAQPPVYGQSVYPPPPGMYS 560
           ++A  P A  Y   TGY +  S P   +P       GS Q  QP  YGQ   P P     
Sbjct: 533 AQAPPPTAPGYLSQTGYSSQGSQPGYGVPPTSQAAYGSSQ--QPTGYGQ---PSPANQSP 578

Query: 561 QGVTPSAQVTVTQTQSQPPPVHGVETSGDRNSSLAPTVQ 574
            G +P+ ++T   TQ QP   +     G  +S+  P+ Q
Sbjct: 593 YGQSPTQKLT---TQQQPASAYAHPGYGG-SSTQPPSAQ 578

[Close]

BLAST of ClCG02G005660 vs. TrEMBL
Match: W9RBH1_9ROSA (Far upstream element-binding protein 2 OS=Morus notabilis GN=L484_026897 PE=4 SV=1)

HSP 1 Score: 264.6 bits (675), Expect = 2.8e-67
Identity = 194/492 (39.43%), Postives = 254/492 (51.63%), Query Frame = 1


Query: 156 IAEADSGGSASTTNQAMNS------TQPGVEQFVMKIPNNKVALVIGKGGETIKSIQSKS 215
           +A+ DS   A  +N A N        Q G     + IPN KV L+IGKGGETIK +Q++S
Sbjct: 60  LADDDSPEPAFHSNSASNPLTVSFVAQTGQTSKRISIPNGKVGLIIGKGGETIKYLQNQS 119

Query: 216 AARVQLVIEISGLKGRKISISSFCHLSFLNSVYPPPKRVQTDVLL----------LRHVE 275
            A++Q+      L+    S++    L+  +      +++  DV+            +   
Sbjct: 120 GAKIQIT---KDLEADPYSLTREVELTGTSEQISRAEQLINDVIAQTEAGGSAPSAKQDA 179

Query: 276 PNMKGHAGYLIP------------ECYLII-----------------LQIIPLHLPPGDT 335
           P+ K  A  + P            +  L+I                 +QI+PLHLPPGDT
Sbjct: 180 PSAKQDANPVQPGAEQFVMKVPNNKVALLIGKGGETIRNMQSRSGARMQIVPLHLPPGDT 239

Query: 336 STERSVYINGLKEQIESAKELINEVISGKRLV--SETTSYAQPTYPPTNNWSQAGQPPLQ 395
           STER+VYI+GLKEQIESAKELINEV+SGKRLV  S   SY QP Y    NW   GQPP+Q
Sbjct: 240 STERTVYIDGLKEQIESAKELINEVLSGKRLVNPSGANSYMQPAYAGAANWGAPGQPPMQ 299

Query: 396 QQQPPQYGYA-PGTY-PPPPGPPYYSNYPTQVGSWDQANQLT-VQPSDQNTGYNYYGQQS 455
           QQ  PQYGY  PG+Y  PPP   YYSN+PT V +WD ++Q T  Q   Q+TGY+YYGQQ+
Sbjct: 300 QQ--PQYGYTQPGSYGQPPPPASYYSNHPTSVAAWDPSHQATHSQQPQQSTGYDYYGQQT 359

Query: 456 QAGSAPP-PYHDYSYGQPASTGTHGYDQSYSQQAPSYGQNFSGQIPPSYDQQNMYLNSG- 515
           Q G AP  P + Y+   PAS   H Y QSYSQQ  +YGQ  S Q+P   +Q N Y++S  
Sbjct: 360 QVGLAPSNPSYSYNQTLPAS---HSYGQSYSQQPSNYGQPISSQVPVP-NQPNPYVSSEY 419

Query: 516 GAPPALPSTNGT--SEATYPNAAYQVS---------TGYWTYPSDPTQSLPQAGNDQSGS 569
           GAPP   + +GT  S+A  P +AY  +          GYW Y S  +Q   Q   DQ+G 
Sbjct: 420 GAPPPSSNLDGTSSSQAMQPASAYPYAHSQTIDNSHAGYWAYSSSTSQPPAQPFYDQTGY 479

[Close]

BLAST of ClCG02G005660 vs. TrEMBL
Match: W9RBH1_9ROSA (Far upstream element-binding protein 2 OS=Morus notabilis GN=L484_026897 PE=4 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 6.2e-59
Identity = 138/227 (60.79%), Postives = 164/227 (72.25%), Query Frame = 1


Query: 5   EDGEELHSDTN-----KRKLEENIQLAKQKAQEIVAKLVSNAESKRPRF---EYESPAVA 64
           E+ E+  S+T      KRKLE+NI  AKQKAQEI A+LVSNAESKRPR    +   PA  
Sbjct: 12  EEEEQARSETTTDTTTKRKLEDNILFAKQKAQEIAARLVSNAESKRPRLADDDSPEPAFH 71

Query: 65  STPQNPPLSSSTFPVSSGTQAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSG 124
           S   + PL+     VS   Q G       TSK+I+IPN KVGLIIGKGGETIKYLQ QSG
Sbjct: 72  SNSASNPLT-----VSFVAQTGQ------TSKRISIPNGKVGLIIGKGGETIKYLQNQSG 131

Query: 125 AKIQITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGS-------ASTTN 184
           AKIQIT+D EADP SLTR+VEL GTSEQ+SRAEQLIN+VIA+ ++GGS       A +  
Sbjct: 132 AKIQITKDLEADPYSLTREVELTGTSEQISRAEQLINDVIAQTEAGGSAPSAKQDAPSAK 191

Query: 185 QAMNSTQPGVEQFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQLV 217
           Q  N  QPG EQFVMK+PNNKVAL+IGKGGETI+++QS+S AR+Q+V
Sbjct: 192 QDANPVQPGAEQFVMKVPNNKVALLIGKGGETIRNMQSRSGARMQIV 227

HSP 2 Score: 58.2 bits (139), Expect = 4.0e-05
Identity = 31/69 (44.93%), Postives = 45/69 (65.22%), Query Frame = 1


Query: 90  INIPNIKVGLIIGKGGETIKYLQLQSGAKIQIT-RDFEADPQSLTRDVELMGTSEQVSRA 149
           + +PN KV L+IGKGGETI+ +Q +SGA++QI          S  R V + G  EQ+  A
Sbjct: 195 MKVPNNKVALLIGKGGETIRNMQSRSGARMQIVPLHLPPGDTSTERTVYIDGLKEQIESA 254

Query: 150 EQLINEVIA 158
           ++LINEV++
Sbjct: 255 KELINEVLS 263

HSP 3 Score: 259.6 bits (662), Expect = 9.0e-66
Identity = 212/600 (35.33%), Postives = 280/600 (46.67%), Query Frame = 1


Query: 21  ENIQLAKQKAQEIVAKLVSNAESKRPRFE------------------------------Y 80
           + IQLAKQ+AQ I A+L + AE+KRPR +                              +
Sbjct: 51  DEIQLAKQRAQAIAARLFNAAEAKRPRLDGGGGGDDDDAGAGLGSLGGGGGGGRATGLGF 110

Query: 81  ESPAVASTPQNPPLSSSTFPVSSGTQAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKY 140
            S A        P  SS     S  Q   Y G+Q TSK I IPN +VG+IIGK GETIK 
Sbjct: 111 SSSAGGGHGSAIPSLSSH---GSTPQYSSYGGYQGTSKTIEIPNGRVGVIIGKSGETIKN 170

Query: 141 LQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQ 200
           LQLQSGAKIQ+TRD +A P S TR VEL GT +Q+SRAEQLINEV+AEAD+  S + +++
Sbjct: 171 LQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQISRAEQLINEVLAEADAASSGNLSSR 230

Query: 201 AMNSTQPGVEQFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQLVIEISGLKGRKISIS 260
             N+ QPG +QF MKI NNKV LVIGKGGETIKS+Q+KS AR+Q V+ +    G   +  
Sbjct: 231 KYNAPQPGADQFQMKIANNKVGLVIGKGGETIKSMQAKSGARIQ-VVPLHLPPGDPATER 290

Query: 261 SFCHLSFLNSVYPPPKRVQTDVLLLRHVEPNMKGH-AGYLIPECYLIILQIIPLHLPPGD 320
           +         +    ++++T   L+  V   ++ +   YL+P+ ++I + I  L      
Sbjct: 291 TV-------YIDGTQEQIETAKQLVIEVTSEVRFYPLSYLLPD-FMIAMPICDL-----S 350

Query: 321 TSTERSVYINGLKEQIESAKELINEVISGKRLVSETTSYAQPTYPPTNNWSQAGQPPLQQ 380
            +  R+    G  +Q                       Y  P   P +NW   G  P+QQ
Sbjct: 351 VNRARNPMSGGYSQQ----------------------GYRPPR--PQSNWGPHGGAPMQQ 410

Query: 381 QQPPQYGY-APGTYPPPP---GPPY--YSNYPTQVG----SWDQANQLTVQPSDQNTGYN 440
              P YGY  PG YP  P   G P   Y +YP   G     WDQ++    Q +   TGY+
Sbjct: 411 ---PGYGYMQPGAYPGAPPQYGAPQQPYGSYPPASGGYQTGWDQSSNQQSQQAPPGTGYD 470

Query: 441 YYGQQSQ--------AGSAPPPYHDYSYGQPASTGTHGYDQSYSQQAPSYGQNF------ 500
           YY QQ Q          +AP     Y+  QP +  + GYD SY+QQ+    Q +      
Sbjct: 471 YYNQQQQPQQQQSAPGTAAPGDATSYNSSQPPAYASQGYDSSYAQQSGGQQQAYDYSSYY 530

Query: 501 --SGQIPPSYDQQNMYLNSG-GAPPALPSTNGTSEATYPNAAYQVSTGYWTYPSDPTQSL 560
              GQ    Y QQ  Y   G G      + N T + + P+   Q   G    P   T S 
Sbjct: 531 QTQGQ-QQGYSQQTGYDQQGYGTSGYGSAANSTQDGSAPSYGAQGVAGQ-ASPGQQT-ST 590

Query: 561 PQAGNDQSGSYQTAQPPVYGQSVYPPPPGMYSQGVTPSAQVTVTQTQSQPPPVHGVETSG 563
           P AG+     Y + QPP    S YP        G       T   TQ QP   +G  + G
Sbjct: 591 PAAGSHP--GYSSQQPPTSAASSYPVQGSAPQSGYGAPPPQTGYGTQPQPQGGYGQGSYG 601

[Close]

BLAST of ClCG02G005660 vs. TAIR10
Match: AT2G25970.1 (AT2G25970.1 KH domain-containing protein)

HSP 1 Score: 237.3 bits (604), Expect = 2.4e-62
Identity = 206/584 (35.27%), Postives = 264/584 (45.21%), Query Frame = 1


Query: 21  ENIQLAKQKAQEIVAKLVSNAESKRPR------FEY-ESPAVASTPQNPPLSSSTFPVSS 80
           + IQ+AKQKAQEI A+L+++A++KRPR      ++Y ++   +S P      S T P S 
Sbjct: 65  DEIQIAKQKAQEIAARLLNSADAKRPRVDNGASYDYGDNKGFSSYPSEGKQMSGTVPSSI 124

Query: 81  GTQAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLT 140
                 Y  FQ T+KKI+IPN++VG+IIGKGGETIKYLQLQSGAKIQ+TRD +ADP   T
Sbjct: 125 PVS---YGSFQGTTKKIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNCAT 184

Query: 141 RDVELMGTSEQVSRAEQLINEVIAEADSG---GSASTTNQAMNSTQPGVEQFVMKIPNNK 200
           R V+L GT +Q+S+AEQLI +V+ EA++G   GS     + M   Q G +QFVMKIPNNK
Sbjct: 185 RTVDLTGTPDQISKAEQLITDVLQEAEAGNTAGSGGGGGRRMGG-QAGADQFVMKIPNNK 244

Query: 201 VALVIGKGGETIKSIQSKSAARVQLV--------------IEISG----------LKGRK 260
           V L+IGKGGETIKS+Q+K+ AR+Q++              ++I G          L    
Sbjct: 245 VGLIIGKGGETIKSMQAKTGARIQVIPLHLPPGDPTPERTLQIDGITEQIEHAKQLVNEI 304

Query: 261 ISISSFCHLSFLNSVYPPPKRVQT---DVLLLRHVEPNMKGHAGYLIPECYLIILQIIPL 320
           IS  +    S +   YP     Q             P   G+ GY+ P  Y         
Sbjct: 305 ISGENRMRNSAMGGGYPQQGGYQARPPSSWAPPGGPPAQPGYGGYMQPGAY--------- 364

Query: 321 HLPPGDTSTERSVYINGLKEQIESAKELINEVISGKRLVSETTSYAQPTYPPTNNWSQAG 380
              PG     +S Y                             SY Q T      + Q+ 
Sbjct: 365 ---PGPPQYGQSPY----------------------------GSYPQQT--SAGYYDQSS 424

Query: 381 QPPLQQQQPPQYGYAPGTYPPPPGPPYYSNYPTQVGSWDQANQLTVQPSDQNTGYNYYGQ 440
            PP QQ    +Y Y                Y  Q      +   +  P+D  TGYNYY  
Sbjct: 425 VPPSQQSAQGEYDY----------------YGQQQSQQPSSGGSSAPPTD-TTGYNYYQH 484

Query: 441 QSQAGSAPPPYHDYSYGQPASTGTHGYDQS--YSQQA-------PSYGQNFSGQIPPSYD 500
            S  G A   Y    YG   ++   GY Q+  Y QQ        PS  ++ S   PPS  
Sbjct: 485 ASGYGQAGQGYQQDGYGAYNASQQSGYGQAAGYDQQGGYGSTTNPSQEEDASQAAPPSSA 544

Query: 501 Q--QNMYLNSGGAPPALPSTN-------GTSEATY---PNAAYQVSTGYWTYP---SDPT 540
           Q  Q  Y  +G  PPA  ST         TS+A Y   P AAY  ++GY   P     PT
Sbjct: 545 QSGQAGYGTTGQQPPAQGSTGQAGYGAPPTSQAGYSSQPAAAY--NSGYGAPPPASKPPT 579

[Close]

BLAST of ClCG02G005660 vs. TAIR10
Match: AT4G10070.1 (AT4G10070.1 KH domain-containing protein)

HSP 1 Score: 149.8 bits (377), Expect = 5.1e-36
Identity = 81/154 (52.60%), Postives = 111/154 (72.08%), Query Frame = 1


Query: 82  GFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGT 141
           G Q+T+++I++P+ KVG++IGKGGETI+YLQ  SGAKIQI RD EADP S  R VE++G+
Sbjct: 172 GTQSTTRRIDVPSSKVGVLIGKGGETIRYLQFNSGAKIQILRDSEADPSSALRPVEIIGS 231

Query: 142 SEQVSRAEQLINEVIAEADSGGSASTTNQAMNSTQP-GV-EQFVMKIPNNKVALVIGKGG 201
              +  AE+LI+ VIAEA++GGS +   +   ST   G+ EQ  +K+PN+KV L+IG+GG
Sbjct: 232 VACIESAEKLISAVIAEAEAGGSPALVARGHPSTHAIGIPEQIEIKVPNDKVGLIIGRGG 291

Query: 202 ETIKSIQSKSAARVQLV---IEISGLKGRKISIS 231
           ETIK++Q++S AR QL+    E  GLK R + IS
Sbjct: 292 ETIKNMQTRSGARTQLIPQHAEGDGLKERTVRIS 325

HSP 2 Score: 77.8 bits (190), Expect = 2.5e-14
Identity = 129/467 (27.62%), Postives = 172/467 (36.83%), Query Frame = 1


Query: 186 IPNNKVALVIGKGGETIKSIQSKSAARVQLVIE-----ISGLKGRKISISSFCHLS---F 245
           +P++KV ++IGKGGETI+ +Q  S A++Q++ +      S L+  +I  S  C  S    
Sbjct: 182 VPSSKVGVLIGKGGETIRYLQFNSGAKIQILRDSEADPSSALRPVEIIGSVACIESAEKL 241

Query: 246 LNSVYPPPKRVQTDVLLLR------------HVE---PNMKGHAGYLIPECYLIILQII- 305
           +++V    +   +  L+ R             +E   PN K   G +I      I  +  
Sbjct: 242 ISAVIAEAEAGGSPALVARGHPSTHAIGIPEQIEIKVPNDK--VGLIIGRGGETIKNMQT 301

Query: 306 ---------PLHLPPGDTSTERSVYINGLKEQIESAKELINEVIS-GKRLVSETTSYAQP 365
                    P H   GD   ER+V I+G K QI+ A ++I +V++   R  S +  Y QP
Sbjct: 302 RSGARTQLIPQH-AEGDGLKERTVRISGDKMQIDIATDMIKDVMNQNARPSSYSGGYNQP 361

Query: 366 TYPPTNNWSQAGQPPLQQQQPPQYGYAPGTYPPPPGPPYYS--NYPTQVGSWDQANQLTV 425
            Y P       G PP    + P   +AP  Y   P  PY S  +Y    G      Q   
Sbjct: 362 AYRPQG----PGGPPQWGSRGP---HAPHPYDYHPRGPYSSQGSYYNSPGFGGYPPQHMP 421

Query: 426 QPSDQNTG----------YNYYGQQ--SQAGSAPPPYHDYSY----GQPASTGTHGYDQS 485
                 T           YNYYG+Q    AG  PPP          G P S  ++GY QS
Sbjct: 422 PRGGYGTDWDQRPPYSGPYNYYGRQGAQSAGPVPPPSGPVPSPAFGGPPLSQVSYGYGQS 481

Query: 486 ----YSQQAPSYGQNFSGQIPPSYDQQNMYLNSGGAPPALPSTNGTSEATYPNAAYQVST 545
               Y   AP     +      +Y+Q     N    PP  P   G               
Sbjct: 482 HGPEYGHAAPYSQTGYQQTYGQTYEQPKYDSN----PPMQPPYGG--------------- 541

Query: 546 GYWTYPSDPTQSLPQAGNDQSGSYQTAQPPV--YG-------QSVYPPPPGMYS------ 581
                      S P AG  QSG YQ  QP V  YG       Q   PP P   +      
Sbjct: 542 -----------SYPPAGGGQSGYYQMQQPGVRPYGMQQGPVQQGYGPPQPAAAASSGDVP 601

HSP 3 Score: 54.3 bits (129), Expect = 2.9e-07
Identity = 28/68 (41.18%), Postives = 38/68 (55.88%), Query Frame = 1


Query: 89  KINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQVSRA 148
           +I +PN KVGLIIG+GGETIK +Q +SGA+ Q+            R V + G   Q+  A
Sbjct: 275 EIKVPNDKVGLIIGRGGETIKNMQTRSGARTQLIPQHAEGDGLKERTVRISGDKMQIDIA 334

Query: 149 EQLINEVI 157
             +I +V+
Sbjct: 335 TDMIKDVM 342

[Close]

BLAST of ClCG02G005660 vs. TAIR10
Match: AT1G33680.1 (AT1G33680.1 KH domain-containing protein)

HSP 1 Score: 144.1 bits (362), Expect = 2.8e-34
Identity = 87/230 (37.83%), Postives = 136/230 (59.13%), Query Frame = 1


Query: 6   DGEELHSDTNKRKLEENIQLAKQKAQEIVAKLVSNAESKRP---RFEYESPAVASTPQNP 65
           +GE+   +TN         +  QK  E  +K V++ +S++        ES  V  +  + 
Sbjct: 157 EGEDDSKETN--------DVVAQKEVENGSKEVTDCDSQKEDEANAGGESKEVNGSVSHD 216

Query: 66  PLSSSTFPVSSGTQAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQIT 125
            +   +  V+ G+        Q+T+++I++P+ KVG +IGKGGE ++YLQ+ SGAKIQI 
Sbjct: 217 EIGDESKEVNGGSTHKEVDDTQSTTRRIDVPSSKVGTLIGKGGEMVRYLQVNSGAKIQIR 276

Query: 126 RDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAMNSTQPGVEQF 185
           RD EADP S  R VE++GT   + +AE+LIN VIAE ++GG  +   + +       EQ 
Sbjct: 277 RDAEADPSSALRPVEIIGTVSCIEKAEKLINAVIAEVEAGGVPALAARGV------PEQM 336

Query: 186 VMKIPNNKVALVIGKGGETIKSIQSKSAARVQLVIEISG--LKGRKISIS 231
            +K+P++KV ++IG+GGETIK++Q+KS AR+QL+ +  G   K R + IS
Sbjct: 337 EIKVPSDKVGVIIGRGGETIKNMQTKSRARIQLIPQNEGDASKERTVRIS 372

HSP 2 Score: 87.0 bits (214), Expect = 4.0e-17
Identity = 118/453 (26.05%), Postives = 175/453 (38.63%), Query Frame = 1


Query: 140 GTSEQVSRAEQLINEVIAEADSGGSASTTNQAMNSTQPGVEQFVMKIPNNKVALVIGKGG 199
           G S++V+ +  + ++ I +     +  +T++ ++ TQ    +  + +P++KV  +IGKGG
Sbjct: 196 GESKEVNGS--VSHDEIGDESKEVNGGSTHKEVDDTQSTTRR--IDVPSSKVGTLIGKGG 255

Query: 200 ETIKSIQSKSAARVQLVIEI-----SGLKGRKISISSFC---HLSFLNSVYPPPKRVQTD 259
           E ++ +Q  S A++Q+  +      S L+  +I  +  C       +N+V    +     
Sbjct: 256 EMVRYLQVNSGAKIQIRRDAEADPSSALRPVEIIGTVSCIEKAEKLINAVIAEVEAGGVP 315

Query: 260 VLLLRHVEPNMK------------GHAGYLIPECYL---IILQIIPLHLPPGDTSTERSV 319
            L  R V   M+            G  G  I          +Q+IP +   GD S ER+V
Sbjct: 316 ALAARGVPEQMEIKVPSDKVGVIIGRGGETIKNMQTKSRARIQLIPQN--EGDASKERTV 375

Query: 320 YINGLKEQIESAKELINEVI-SGKRLVSETTSYAQPTYPPTNNWSQAGQPPLQQQQPPQ- 379
            I+G K QI+ A  LI +V+    R    +  + Q  Y P       G PP    + P  
Sbjct: 376 RISGDKRQIDIATALIKDVMYQDGRPSPYSGGFNQQAYQPRG----PGGPPQWGSRGPHG 435

Query: 380 -----YGYAPGTYPPPPG----PPYYSNYPTQ-------VGS-WDQANQLTVQPSDQNTG 439
                Y Y  G   P  G    PP    YP Q        GS W+Q           +  
Sbjct: 436 PHSMPYNYHHGGPYPSQGSHFRPPNSGGYPPQHMPPRSGYGSGWEQR-------PPHSGP 495

Query: 440 YNYYGQQSQAGSAPPPYHDYSYGQPASTGTHGYDQSYSQQAPSYGQNFSGQIPPSYDQQN 499
           Y+YYG+Q      P P H  SY Q  +  T+G  Q Y Q  P Y        PP +    
Sbjct: 496 YDYYGRQGGQNPGPVPSHGASYSQAGAQQTYG--QMYDQ--PHYDN------PPMHQSYG 555

Query: 500 MYLNSGGAPPALPSTNGTSEATYPNAAY----QVSTGYW-TYPSDPTQSLPQAGNDQSGS 542
            Y   GG+    PS  G  +   P+  Y        GY    P+ P   +P  G      
Sbjct: 556 GY---GGSQQGYPSAGGQHQMQQPSRPYGMQGSAEQGYGPPRPAAPPGDVPYQG------ 611

HSP 3 Score: 55.5 bits (132), Expect = 1.3e-07
Identity = 36/92 (39.13%), Postives = 48/92 (52.17%), Query Frame = 1


Query: 89  KINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQVSRA 148
           +I +P+ KVG+IIG+GGETIK +Q +S A+IQ+    E D  S  R V + G   Q+  A
Sbjct: 323 EIKVPSDKVGVIIGRGGETIKNMQTKSRARIQLIPQNEGD-ASKERTVRISGDKRQIDIA 382

Query: 149 EQLINEVIAE--ADSGGSASTTNQAMNSTQPG 179
             LI +V+ +    S  S     QA     PG
Sbjct: 383 TALIKDVMYQDGRPSPYSGGFNQQAYQPRGPG 413

[Close]

BLAST of ClCG02G005660 vs. TAIR10
Match: AT5G04430.2 (AT5G04430.2 binding to TOMV RNA 1L (long form))

HSP 1 Score: 62.4 bits (150), Expect = 1.1e-09
Identity = 45/145 (31.03%), Postives = 72/145 (49.66%), Query Frame = 1


Query: 92  IPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQVSRAEQL 151
           + N   G +IGKGG TI   Q +SGA+IQ++R+ E  P +  R + + G+ ++V    +L
Sbjct: 41  VSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLEL 100

Query: 152 INEVI---AEADSGGSASTTNQAMNSTQPGVEQFVMKIPNNKVALVIGKGGETIKSIQSK 211
           I + +     A+ G          N  +P   +  + +PN+    +IGKGG TIKS   +
Sbjct: 101 ILDKLHSELHAEDG----------NEVEPR-RRIRLVVPNSSCGGIIGKGGATIKSFIEE 160

Query: 212 SAARVQ---LVIEISGLKGRKISIS 231
           S A ++   L     GL  R +++S
Sbjct: 161 SKAGIKISPLDNTFYGLSDRLVTLS 174

HSP 2 Score: 40.0 bits (92), Expect = 5.7e-03
Identity = 52/185 (28.11%), Postives = 68/185 (36.76%), Query Frame = 1


Query: 89  KINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQSLTRDVELMGTSEQVSRA 148
           ++ +PN   G IIGKGG TIK    +S A I+I+           R V L GT E+  RA
Sbjct: 124 RLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTLSGTFEEQMRA 183

Query: 149 EQLINEVIAEAD-----------------SGGSASTTNQAMNSTQPGVEQFVMKIPNNK- 208
             LI   + E D                 SG        A+ S        V   PN   
Sbjct: 184 IDLILAKLTEDDHYSQNVHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAPNGSG 243

Query: 209 -----------------VA-----LVIGKGGETIKSIQSKSAARVQLVIE---ISGLKGR 231
                            VA     LV+G+GG  I  I   + AR+++      +SG   R
Sbjct: 244 GKYQNHKEEASTTVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDRGDFMSGTTDR 303

HSP 3 Score: 35.0 bits (79), Expect = 1.8e-01
Identity = 19/48 (39.58%), Postives = 28/48 (58.33%), Query Frame = 1


Query: 168 TNQAMNSTQPGVEQFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQL 216
           +++A ++ +P   +F+  + N     VIGKGG TI   Q+KS AR+QL
Sbjct: 25  SSEADSAEKPTHIRFL--VSNAAAGSVIGKGGSTITEFQAKSGARIQL 70

[Close]

BLAST of ClCG02G005660 vs. TAIR10
Match: AT5G50940.1 (AT5G50940.1 RNA-binding KH domain-containing protein)

HSP 1 Score: 52.8 bits (125), Expect = 8.5e-07
Identity = 34/87 (39.08%), Postives = 48/87 (55.17%), Query Frame = 1


Query: 72  SSGTQAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADPQS 131
           SS      YH  +TT + I++   KV L++G    T+++LQ    A+I+I +D E D +S
Sbjct: 176 SSHVDGRNYHKAETT-RTIHVSCPKVDLLVGAAA-TLRFLQHNLCAQIRILKDSEVDLKS 235

Query: 132 LTRDVELMGTSEQVSRAEQLINEVIAE 159
             R VEL GT  Q+   +QLI  V+AE
Sbjct: 236 AQRPVELTGTVLQIEFTQQLIESVLAE 260

[Close]

BLAST of ClCG02G005660 vs. NCBI nr
Match: gi|659109837|ref|XP_008454908.1| (PREDICTED: far upstream element-binding protein 2-like [Cucumis melo])

HSP 1 Score: 506.9 bits (1304), Expect = 4.6e-140
Identity = 255/313 (81.47%), Postives = 263/313 (84.03%), Query Frame = 1


Query: 278 LQIIPLHLPPGDTSTERSVYINGLKEQIESAKELINEVISGKRLVSETTSYAQPTYPPTN 337
           +QIIPLHLPPGDTSTERSVYINGLKEQIESAKELINEVISGKRLVSET SYAQPTYP TN
Sbjct: 174 VQIIPLHLPPGDTSTERSVYINGLKEQIESAKELINEVISGKRLVSETNSYAQPTYPSTN 233

Query: 338 NWSQAGQPPLQQQQPPQYGYAPGTYPPPPGPPYYSNY-PTQVGSWDQANQLTVQPSDQNT 397
           NWSQAGQ P  QQQ PQYGYAPGTYPPPPGP YYS Y PTQV SWDQ+NQ T+QPSDQ+T
Sbjct: 234 NWSQAGQQPPLQQQQPQYGYAPGTYPPPPGPQYYSTYPPTQVASWDQSNQSTMQPSDQST 293

Query: 398 GYNYYGQQSQAGSAPPPYHDYSYGQPASTGTHGYDQSYSQQAPSYGQNFSGQIPPSYDQQ 457
           GYNYYGQQSQ GSAPPPY DYSYGQPAS+GTHGYDQSYSQQAPSY     GQIPPSYDQQ
Sbjct: 294 GYNYYGQQSQVGSAPPPYQDYSYGQPASSGTHGYDQSYSQQAPSY-----GQIPPSYDQQ 353

Query: 458 NMYLNSGGAPPALPSTNGTSEATYPNAAYQVSTGYWTYPSDPTQSLPQAGNDQSGSYQT- 517
           NMYLNSG APPALPSTNGTSE TYP AAYQ STGYWTY +DPTQSLPQ GNDQSGSYQT 
Sbjct: 354 NMYLNSGSAPPALPSTNGTSEGTYPTAAYQASTGYWTYQTDPTQSLPQTGNDQSGSYQTV 413

Query: 518 ----AQPPVYGQSVYPPPPGMYSQGVTPSAQVTVTQTQSQPPPVHGVETSGDRN----SS 577
               AQPPVYGQSVYPPPPG+YS    P    TV   QSQPPP   VETS D N     +
Sbjct: 414 SGGHAQPPVYGQSVYPPPPGVYSAPAPPPE--TVAPIQSQPPP--SVETSEDGNLNSGQN 473

Query: 578 LAPTVQETANSES 581
           LAPTVQETANSES
Sbjct: 474 LAPTVQETANSES 477

[Close]

BLAST of ClCG02G005660 vs. NCBI nr
Match: gi|659109837|ref|XP_008454908.1| (PREDICTED: far upstream element-binding protein 2-like [Cucumis melo])

HSP 1 Score: 306.6 bits (784), Expect = 9.2e-80
Identity = 157/164 (95.73%), Postives = 160/164 (97.56%), Query Frame = 1


Query: 53  PAVASTPQNPPLSSSTFPVSSGTQAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQ 112
           PA A  P NPPLSSSTFPVSSGTQAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQ
Sbjct: 14  PAAAPAPLNPPLSSSTFPVSSGTQAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQ 73

Query: 113 LQSGAKIQITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAM 172
           LQSGAKIQITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAM
Sbjct: 74  LQSGAKIQITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAM 133

Query: 173 NSTQPGVEQFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQLV 217
           NS+QPGVEQFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQ++
Sbjct: 134 NSSQPGVEQFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQII 177

HSP 2 Score: 494.2 bits (1271), Expect = 3.1e-136
Identity = 250/313 (79.87%), Postives = 261/313 (83.39%), Query Frame = 1


Query: 278 LQIIPLHLPPGDTSTERSVYINGLKEQIESAKELINEVISGKRLVSETTSYAQPTYPPTN 337
           +QIIPLHLPPGDTSTERSVYINGLKEQIESAKELINEVISGKRLVSETTSYAQPTYP TN
Sbjct: 213 VQIIPLHLPPGDTSTERSVYINGLKEQIESAKELINEVISGKRLVSETTSYAQPTYPSTN 272

Query: 338 NWSQAGQPPLQQQQPPQYGYAPGTYPPPPGPPYYSNYPTQVGSWDQANQLTVQPSDQNTG 397
           NWSQAGQ P  QQQ PQYGYA GTYPPP GPPYYS YP QV SWDQ+NQ TVQPSDQ+TG
Sbjct: 273 NWSQAGQQPPLQQQQPQYGYAAGTYPPPQGPPYYSTYPAQVASWDQSNQSTVQPSDQSTG 332

Query: 398 YNYYGQQSQAGSAPPPYHDYSYGQPASTGTHGYDQSYSQQAPSYGQNFSGQIPPSYDQQN 457
           YNYYGQQSQ GSAPP +HDYSYGQPAS+GTHGYDQSYSQQAPSY     GQIPPSYDQQN
Sbjct: 333 YNYYGQQSQVGSAPPQFHDYSYGQPASSGTHGYDQSYSQQAPSY-----GQIPPSYDQQN 392

Query: 458 MYLNSGGAPPALPSTNGTSEATYPNAAYQVSTGYWTY-PSDPTQSLPQAGNDQSGSYQT- 517
           MYLNSG AP ALPS+NGTSE TYP AAYQ STGYWTY  +D TQSLPQ GNDQSGSYQT 
Sbjct: 393 MYLNSGSAPSALPSSNGTSEGTYPTAAYQASTGYWTYQTTDQTQSLPQTGNDQSGSYQTV 452

Query: 518 ----AQPPVYGQSVYPPPPGMYSQGVTPSAQVTVTQTQSQPPPVHGVETSGDRNS----S 577
               AQPPVYGQSVYPPPPG+YS    P  ++ V  TQSQPP    VETS D NS    +
Sbjct: 453 SGGHAQPPVYGQSVYPPPPGVYSAPAPPPPEM-VAPTQSQPP---SVETSEDGNSNSGQN 512

Query: 578 LAPTVQETANSES 581
           LAPTVQE ANSES
Sbjct: 513 LAPTVQENANSES 516

[Close]

BLAST of ClCG02G005660 vs. NCBI nr
Match: gi|449438689|ref|XP_004137120.1| (PREDICTED: far upstream element-binding protein 1 [Cucumis sativus])

HSP 1 Score: 410.2 bits (1053), Expect = 5.9e-111
Identity = 266/508 (52.36%), Postives = 301/508 (59.25%), Query Frame = 1


Query: 1   MKDHEDGEELHSDTNKRKLEENIQLAKQKAQEIVAKLVSNAESKRPRFEYESPAVASTPQ 60
           MKDH+D +ELHSDTNKRKLEENIQLAKQKAQEIVAKLVSNAESKRPRFEYE PA A  PQ
Sbjct: 1   MKDHDDADELHSDTNKRKLEENIQLAKQKAQEIVAKLVSNAESKRPRFEYEPPAPAPPPQ 60

Query: 61  NPPLSSSTFPVSSGTQAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQ 120
           NPPLSSSTF VSSGTQAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQ
Sbjct: 61  NPPLSSSTFTVSSGTQAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQ 120

Query: 121 ITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAMNSTQPGVE 180
           ITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQA+NS+QPGVE
Sbjct: 121 ITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAINSSQPGVE 180

Query: 181 QFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQLV--------------IEISGLKGRK 240
           QFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQ++              + I+GLK + 
Sbjct: 181 QFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQIIPLHLPPGDTSTERSVYINGLKEQI 240

Query: 241 ISISSFCH------------LSFLNSVY------------PPPKRVQTDVLLLRHVEPNM 300
            S     +             S+    Y            PP ++ Q          P  
Sbjct: 241 ESAKELINEVISGKRLVSETTSYAQPTYPSTNNWSQAGQQPPLQQQQPQYGYAAGTYPPP 300

Query: 301 KGHAGY-LIPECYLIILQIIPLHLPPGDTSTERSVYINGLKEQIESAKELINEVISGKRL 360
           +G   Y   P       Q     + P D ST  + Y  G + Q+ SA    ++       
Sbjct: 301 QGPPYYSTYPAQVASWDQSNQSTVQPSDQSTGYNYY--GQQSQVGSAPPQFHDY------ 360

Query: 361 VSETTSYAQPTYPPTNNWSQAGQPPLQQQQPPQYGYAPGTYPPPPGPPYYSNYPTQVGSW 420
                SY QP    T+ + Q+       QQ P YG  P +Y          + P+ + S 
Sbjct: 361 -----SYGQPASSGTHGYDQS-----YSQQAPSYGQIPPSYDQQNMYLNSGSAPSALPSS 420

Query: 421 DQANQLTVQPS--DQNTGYNYYGQQSQAGSAPPPYHDYSYGQPASTGTHGYDQSYSQQAP 468
           +  ++ T   +    +TGY  Y    Q  S P   +D S      +G H        Q P
Sbjct: 421 NGTSEGTYPTAAYQASTGYWTYQTTDQTQSLPQTGNDQSGSYQTVSGGHA-------QPP 475

HSP 2 Score: 326.6 bits (836), Expect = 8.6e-86
Identity = 246/624 (39.42%), Postives = 303/624 (48.56%), Query Frame = 1


Query: 5   EDGEELHSDT-----NKRKLEENIQLAKQKAQEIVAKLVSNAESKRPRFEYES----PAV 64
           E   EL+SDT     +KRKLE+NI LAKQKAQEI A+LVSNAESKRPR + +S    P  
Sbjct: 7   EQQHELNSDTASADSHKRKLEDNILLAKQKAQEIAARLVSNAESKRPRLDDDSSEALPPS 66

Query: 65  ASTPQNPPLSSSTFPVSSGTQAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQS 124
            S   +  +S+  FPV    QA   H  Q +SKKI+IPN KVGLIIGKGGETIKYLQ QS
Sbjct: 67  NSNSNSNSVSNPPFPVFFAAQA---HAPQGSSKKISIPNGKVGLIIGKGGETIKYLQHQS 126

Query: 125 GAKIQITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSASTTNQAMNST 184
           GAKIQIT+D EADP SLTRDVEL GTSEQ+SRAEQLIN+VI + D+GGSAS+ N   NS 
Sbjct: 127 GAKIQITKDSEADPYSLTRDVELTGTSEQISRAEQLINDVITQTDAGGSASSANHGFNSV 186

Query: 185 QPGVEQFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQLVIEISGLKGRKISISSFCHL 244
           Q G EQF+MK+PNNKVAL+IGKGGETI+++QSKS AR+Q+V     L     S     H+
Sbjct: 187 QSGAEQFIMKVPNNKVALLIGKGGETIRNMQSKSGARIQIV--PLHLPPGDTSTERNVHI 246

Query: 245 SFLNSVYPPPKRVQTDVLLLRHVEPNMKGHAGYLIPECYLIILQIIPLHLPPGDTSTERS 304
                     K +  +V+  + +  N  G   Y           + P + PP +  T+  
Sbjct: 247 DGQKEQIDAAKELVNEVISGKRL-VNTSGGNSY-----------VQPAYTPPANWGTQ-- 306

Query: 305 VYINGLKEQIESAKELINEVISGKRLVSETTSYAQPTYP-PTNNWSQAGQPPLQQQQPPQ 364
                ++  ++  +   +   SG  L     +     YP     W QA Q  +   QPPQ
Sbjct: 307 -----VQPPMQQQQPQYDYTQSGSYLTPPAPASYYSGYPTQVAGWDQANQSTV--SQPPQ 366

Query: 365 YGYAPGTYPPPPGPPYYSNYPTQVGSWDQANQLTVQPSDQNTGYNYYGQQSQAGSAPPPY 424
                G Y    G                                YYGQQ+Q GS  P  
Sbjct: 367 QSTGYGYYGQQDG--------------------------------YYGQQAQLGST-PQN 426

Query: 425 HDYSYGQPASTGTHGYDQSYSQQAPSYGQNFSGQIPPSYDQQNMYLNSGGAPPALPST-N 484
            DYSY Q  +   + YDQSYS Q+ +YG N   Q     DQ     + G  PP +PS  N
Sbjct: 427 PDYSYNQ--TLPNYSYDQSYSHQSANYGHNIPSQ-AAVLDQPKQNHSLGYGPPPVPSNLN 486

Query: 485 GTS----EATYPNAAYQV--------STGYWTYPSDPTQSLPQA-----------GNDQS 544
           GTS        P A +            GYWTYP+   Q   QA           G DQ 
Sbjct: 487 GTSFSQTAQQSPGAHHHAHSQPMANPQAGYWTYPNSTNQPPSQAYNQTGYFQPSYGGDQQ 546

Query: 545 GSYQTAQPPVYGQSVYP------PPPGMYSQGV------TPSAQVTVTQTQSQPPPVHGV 581
                A    YG+  YP      P P  Y Q         P  +    +     P   G 
Sbjct: 547 AQVPPASQSEYGEGGYPFQSAPEPAPASYVQETQHPDHEEPQLEQQSNRLDDTYPRATGD 568

[Close]

BLAST of ClCG02G005660 vs. NCBI nr
Match: gi|645262139|ref|XP_008236628.1| (PREDICTED: far upstream element-binding protein 1-like [Prunus mume])

HSP 1 Score: 309.7 bits (792), Expect = 1.1e-80
Identity = 251/620 (40.48%), Postives = 308/620 (49.68%), Query Frame = 1


Query: 13  DTNKRKLEEN---IQLAKQKAQEIVAKLVSNAESKRPRFEYESPAVASTPQNPPLSSSTF 72
           D+ KRKLE++   I+LAKQKAQEI A+LVS+AESKRPR E E P   S   NPP     +
Sbjct: 16  DSAKRKLEDSSFSIELAKQKAQEIAARLVSDAESKRPRLE-EEPFQPSPVFNPP----AY 75

Query: 73  PVSSGTQAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQSGAKIQITRDFEADP 132
           PVS   Q+G  +G   TSKKI IPN KVG+IIGKGGETIK LQLQSGAKIQITRD EAD 
Sbjct: 76  PVSFTAQSGQSYGSPGTSKKITIPNGKVGVIIGKGGETIKQLQLQSGAKIQITRDSEADL 135

Query: 133 QSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSA-STTNQAMNSTQPGVEQFVMKIPN 192
            SLTRDV+L GTSEQ+SRAEQLI++VIAEAD+GGSA  +TNQ  NS QPG EQFVMK+PN
Sbjct: 136 SSLTRDVDLTGTSEQISRAEQLISDVIAEADAGGSAPPSTNQGFNSIQPGTEQFVMKVPN 195

Query: 193 NKVALVIGKGGETIKSIQSKSAARVQLVIEISGLKGRKISISSFCHLSFLNSVYPPPKRV 252
           NKVAL+IGKGGETI+++QSKS AR+Q+V     L    +S     +++ +       K +
Sbjct: 196 NKVALIIGKGGETIRNMQSKSGARIQVV--PLHLPPGDMSAERSVYINGVTEQIEAAKEL 255

Query: 253 QTDVLLLRHVEPNMKGHAGYLIPECYLIILQIIPLHLPPGDTSTERSVYINGLKEQIESA 312
             +V+  + +  N  G   Y+              + PPG+ +      I   +      
Sbjct: 256 VNEVISGKRL-VNTSGTNSYMQQS-----------YAPPGNWAPPGQAPIQQQQPHYG-- 315

Query: 313 KELINEVISGKRLVSETTSYAQP-----TYP-PTNNWSQAGQPPLQQQQPPQ-------Y 372
                         ++  SYA P      YP     W Q+ Q P    QPPQ       Y
Sbjct: 316 -------------YTQPGSYAPPASYYGNYPTQVAGWDQSNQVP--SSQPPQESSAYNYY 375

Query: 373 GYAPGTYPPPPGPPYYSNYPTQVGSWDQANQLTVQPSDQNTGYNY-YGQQSQAGSAPPPY 432
           G  P   P PP P Y  N    V S                GY+  Y QQ       PP 
Sbjct: 376 GQQPPMGPAPPNPSYNYNQTPPVAS---------------HGYDQGYAQQ-------PP- 435

Query: 433 HDYSYGQPASTGTHGYDQSYSQQAPSYGQNFSGQIPPSYDQQNMYLNSGGAPPALPST-- 492
              SYGQ  S+   G DQ                       Q  Y  SG  PPA+PS+  
Sbjct: 436 ---SYGQNISSQAPGSDQ-----------------------QQQYATSGYGPPAVPSSVD 495

Query: 493 -NGTSEATYPNAAYQVSTGYWTYPSDPTQSLPQAG----NDQSGSYQT------------ 552
            + +S++T P+AAY V      Y   P  S  QAG    + Q+G YQT            
Sbjct: 496 GSASSQSTQPSAAYPV-----PYSQPPANS--QAGYWQPHTQTGYYQTNYGGQQAVEDPS 543

Query: 553 --AQPPVYGQSVYP-PPPGMYSQGVTP---SAQVTVTQTQSQP-------PPVHGVETSG 581
             +Q  VYGQ  YP P P  Y Q V P          Q QSQP       P  +  E +G
Sbjct: 556 AASQSAVYGQGGYPQPDPSHYGQAVNPPVNGESQHQPQHQSQPPTNGYVDPSGYAAEKTG 543

[Close]

BLAST of ClCG02G005660 vs. NCBI nr
Match: gi|595796733|ref|XP_007201191.1| (hypothetical protein PRUPE_ppa002757mg [Prunus persica])

HSP 1 Score: 295.0 bits (754), Expect = 2.8e-76
Identity = 236/594 (39.73%), Postives = 296/594 (49.83%), Query Frame = 1


Query: 1   MKDHEDGEE---LHSDTNKRKLEEN---IQLAKQKAQEIVAKLVSNAESKRPRFEYESPA 60
           MK+ +D  +      D+ KRKLE++   I+LAKQKAQEI A+LVS+AESKRPR E E P 
Sbjct: 1   MKEDQDQHQEATATGDSAKRKLEDSSFSIELAKQKAQEIAARLVSDAESKRPRLE-EEPF 60

Query: 61  VASTPQNPPLSSSTFPVSSGTQAGPYHGFQTTSKKINIPNIKVGLIIGKGGETIKYLQLQ 120
             S   NPP     +PVS   Q+G  +G   TSKKI IPN KVG+IIGKGGETIK LQLQ
Sbjct: 61  QPSPVFNPP----PYPVSFTAQSGQSYGSPGTSKKITIPNGKVGVIIGKGGETIKQLQLQ 120

Query: 121 SGAKIQITRDFEADPQSLTRDVELMGTSEQVSRAEQLINEVIAEADSGGSA-STTNQAMN 180
           SGAKIQITRD EAD  SLTRDV+L GT EQ+SRAEQLI++VIAEAD+GGSA  +TNQ  N
Sbjct: 121 SGAKIQITRDSEADLSSLTRDVDLTGTFEQISRAEQLISDVIAEADAGGSAPPSTNQGFN 180

Query: 181 STQPGVEQFVMKIPNNKVALVIGKGGETIKSIQSKSAARVQLVIEISGLKGRKISISSFC 240
           S QPG EQFVMK+PNNKVAL+IGKGGETI+++QSKS AR+Q+V     L    +S     
Sbjct: 181 SIQPGTEQFVMKVPNNKVALIIGKGGETIRNMQSKSGARIQVV--PLHLPPGDMSAERSV 240

Query: 241 HLSFLNSVYPPPKRVQTDVLLLRHVEPNMKGHAGYLIPECYLIILQIIPLHLPPGDTSTE 300
           +++ +       K +  +V+  + +  N  G   Y+              + PPG+ +  
Sbjct: 241 YINGVTEQIEAAKELVNEVISGKRL-VNTSGTNSYMQQS-----------YAPPGNWAPP 300

Query: 301 RSVYINGLKEQIESAKELINEVISGKRLVSETTSYAQP-----TYPPTN-NWSQAGQPPL 360
               I   +                    ++  SYA P      YP     W Q+ Q P 
Sbjct: 301 GQAPIQQQQPHYG---------------YTQPGSYAPPASYYGNYPTQGAGWDQSNQVP- 360

Query: 361 QQQQPPQ-------YGYAPGTYPPPPGPPYYSNYPTQVGSWDQANQLTVQPSDQNTGYNY 420
              QPPQ       YG  P     PP P Y  N    V S                GY+ 
Sbjct: 361 -SSQPPQESSAYNYYGQQPPMGSAPPNPSYNYNQTPPVAS---------------HGYDQ 420

Query: 421 -YGQQSQAGSAPPPYHDYSYGQPASTGTHGYDQSYSQQAPSYGQNFSGQIPPSYDQQNMY 480
            Y QQ       PP    SYGQ  S+   G DQ                       Q  Y
Sbjct: 421 GYAQQ-------PP----SYGQNISSQAPGSDQ-----------------------QQQY 480

Query: 481 LNSGGAPPALPST---NGTSEATYPNAAYQVSTGYWTYPSDPTQSLPQAG----NDQSGS 540
             SG  PPA+PS+   + +S++T P+AAY V      Y   P  S  QAG    + Q+G 
Sbjct: 481 ATSGYGPPAVPSSVDGSASSQSTQPSAAYPV-----PYSQPPANS--QAGYWQPHTQTGY 502

Query: 541 YQT--------------AQPPVYGQSVYP-PPPGMYSQGVTPSAQVTVTQTQSQ 552
           YQT              +Q  VYGQ  YP P P  Y + V P   ++     S+
Sbjct: 541 YQTSYGGQQAVEDPSAASQSAVYGQGGYPQPDPSHYGEAVNPPIIISFISRSSK 502

The following BLAST results are available for this feature:

BLAST of ClCG02G005660 vs. Swiss-Prot


Match Name	E-value	Identity	Description
FUBP2_HUMAN	5.3e-19	32.85	Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP PE=1 SV=4	[more]
FUBP2_RAT	1.2e-18	32.68	Far upstream element-binding protein 2 OS=Rattus norvegicus GN=Khsrp PE=1 SV=1	[more]
FUBP2_MOUSE	1.2e-18	32.68	Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp PE=1 SV=2	[more]
FUBP1_HUMAN	5.5e-16	33.33	Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1 PE=1 SV=3	[more]
FUBP2_CHICK	1.2e-15	33.71	Far upstream element-binding protein 2 OS=Gallus gallus GN=KHSRP PE=1 SV=1	[more]

BLAST of ClCG02G005660 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K828_CUCSA	2.2e-136	79.87	RNA-binding protein Nova-1 OS=Cucumis sativus GN=Csa_7G074890 PE=4 SV=1	[more]
A0A0A0K828_CUCSA	4.1e-111	52.36	RNA-binding protein Nova-1 OS=Cucumis sativus GN=Csa_7G074890 PE=4 SV=1	[more]
A0A0K9PWL1_ZOSMR	6.7e-69	36.10	Far upstream element-binding protein OS=Zostera marina GN=ZOSMA_14G00930 PE=4 SV...	[more]
W9RBH1_9ROSA	2.8e-67	39.43	Far upstream element-binding protein 2 OS=Morus notabilis GN=L484_026897 PE=4 SV...	[more]
W9RBH1_9ROSA	6.2e-59	60.79	Far upstream element-binding protein 2 OS=Morus notabilis GN=L484_026897 PE=4 SV...	[more]

BLAST of ClCG02G005660 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G25970.1	2.4e-62	35.27	KH domain-containing protein	[more]
AT4G10070.1	5.1e-36	52.60	KH domain-containing protein	[more]
AT1G33680.1	2.8e-34	37.83	KH domain-containing protein	[more]
AT5G04430.2	1.1e-09	31.03	binding to TOMV RNA 1L (long form)	[more]
AT5G50940.1	8.5e-07	39.08	RNA-binding KH domain-containing protein	[more]

BLAST of ClCG02G005660 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659109837\|ref\|XP_008454908.1\|	4.6e-140	81.47	PREDICTED: far upstream element-binding protein 2-like [Cucumis melo]	[more]
gi\|659109837\|ref\|XP_008454908.1\|	9.2e-80	95.73	PREDICTED: far upstream element-binding protein 2-like [Cucumis melo]	[more]
gi\|449438689\|ref\|XP_004137120.1\|	5.9e-111	52.36	PREDICTED: far upstream element-binding protein 1 [Cucumis sativus]	[more]
gi\|645262139\|ref\|XP_008236628.1\|	1.1e-80	40.48	PREDICTED: far upstream element-binding protein 1-like [Prunus mume]	[more]
gi\|595796733\|ref\|XP_007201191.1\|	2.8e-76	39.73	hypothetical protein PRUPE_ppa002757mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004087	KH_dom
IPR004088	KH_dom_type_1

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding
GO:0003723	RNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003735	structural constituent of ribosome

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG02G005660.1	ClCG02G005660.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004087	K Homology domain	SMART	SM00322	kh_6	coord: 178..317 score: 7.3E-9coord: 84..157 score: 1.6
IPR004088	K Homology domain, type 1	GENE3D	G3DSA:3.30.1370.10		coord: 287..317 score: 2.2E-16coord: 85..159 score: 3.9E-19coord: 175..217 score: 2.2
IPR004088	K Homology domain, type 1	PFAM	PF00013	KH_1	coord: 183..223 score: 4.7E-10coord: 88..154 score: 2.1
IPR004088	K Homology domain, type 1	PROFILE	PS50084	KH_TYPE_1	coord: 179..215 score: 11.028coord: 85..152 score: 17
IPR004088	K Homology domain, type 1	unknown	SSF54791	Eukaryotic type KH-domain (KH-domain type I)	coord: 177..219 score: 3.72E-11coord: 287..318 score: 3.72E-11coord: 80..161 score: 7.01
None	No IPR available	unknown	Coil	Coil	coord: 16..36 scor
None	No IPR available	PANTHER	PTHR10288	KH DOMAIN CONTAINING RNA BINDING PROTEIN	coord: 272..376 score: 5.9E-100coord: 21..207 score: 5.9E
None	No IPR available	PANTHER	PTHR10288:SF171	F17H15.1/F17H15.1-RELATED	coord: 21..207 score: 5.9E-100coord: 272..376 score: 5.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG02G005660	Csa7G074890	Cucumber (Chinese Long) v2	cuwcgB547
ClCG02G005660	MELO3C018428	Melon (DHL92) v3.5.1	mewcgB197
ClCG02G005660	Cla015989	Watermelon (97103) v1	wcgwmB198
ClCG02G005660	Cla97C02G032640	Watermelon (97103) v2	wcgwmbB138
ClCG02G005660	Bhi05G001017	Wax gourd	wcgwgoB275
ClCG02G005660	CSPI07G07870	Wild cucumber (PI 183967)	cpiwcgB576
ClCG02G005660	Cucsa.220100	Cucumber (Gy14) v1	cgywcgB396
ClCG02G005660	CmaCh11G017700	Cucurbita maxima (Rimu)	cmawcgB101
ClCG02G005660	CmaCh19G006240	Cucurbita maxima (Rimu)	cmawcgB460
ClCG02G005660	CmoCh19G006420	Cucurbita moschata (Rifu)	cmowcgB459
ClCG02G005660	CmoCh11G013400	Cucurbita moschata (Rifu)	cmowcgB088
ClCG02G005660	Lsi11G010310	Bottle gourd (USVL1VR-Ls)	lsiwcgB097
ClCG02G005660	Cp4.1LG15g05080	Cucurbita pepo (Zucchini)	cpewcgB233
ClCG02G005660	Cp4.1LG04g08270	Cucurbita pepo (Zucchini)	cpewcgB590
ClCG02G005660	CsGy7G007430	Cucumber (Gy14) v2	cgybwcgB507
ClCG02G005660	MELO3C018428.2	Melon (DHL92) v3.6.1	medwcgB192
ClCG02G005660	Carg22048	Silver-seed gourd	carwcgB0203
ClCG02G005660	CsaV3_7G008850	Cucumber (Chinese Long) v3	cucwcgB572

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG02G005660	Silver-seed gourd	carwcgB0786
ClCG02G005660	Silver-seed gourd	carwcgB0868
ClCG02G005660	Cucumber (Chinese Long) v3	cucwcgB140
ClCG02G005660	Watermelon (97103) v2	wcgwmbB129
ClCG02G005660	Watermelon (97103) v2	wcgwmbB171
ClCG02G005660	Wax gourd	wcgwgoB314
ClCG02G005660	Watermelon (Charleston Gray)	wcgwcgB017
ClCG02G005660	Watermelon (Charleston Gray)	wcgwcgB086
ClCG02G005660	Watermelon (Charleston Gray)	wcgwcgB138
ClCG02G005660	Cucumber (Gy14) v1	cgywcgB156
ClCG02G005660	Cucumber (Gy14) v1	cgywcgB405
ClCG02G005660	Cucurbita maxima (Rimu)	cmawcgB485
ClCG02G005660	Cucurbita maxima (Rimu)	cmawcgB531
ClCG02G005660	Cucurbita maxima (Rimu)	cmawcgB757
ClCG02G005660	Cucurbita moschata (Rifu)	cmowcgB485
ClCG02G005660	Cucurbita moschata (Rifu)	cmowcgB759
ClCG02G005660	Wild cucumber (PI 183967)	cpiwcgB131
ClCG02G005660	Wild cucumber (PI 183967)	cpiwcgB136
ClCG02G005660	Cucumber (Chinese Long) v2	cuwcgB127
ClCG02G005660	Melon (DHL92) v3.5.1	mewcgB104
ClCG02G005660	Melon (DHL92) v3.5.1	mewcgB518
ClCG02G005660	Watermelon (97103) v1	wcgwmB192
ClCG02G005660	Cucurbita pepo (Zucchini)	cpewcgB267
ClCG02G005660	Cucurbita pepo (Zucchini)	cpewcgB428
ClCG02G005660	Cucurbita pepo (Zucchini)	cpewcgB662
ClCG02G005660	Bottle gourd (USVL1VR-Ls)	lsiwcgB057
ClCG02G005660	Bottle gourd (USVL1VR-Ls)	lsiwcgB132
ClCG02G005660	Bottle gourd (USVL1VR-Ls)	lsiwcgB428
ClCG02G005660	Cucumber (Gy14) v2	cgybwcgB122
ClCG02G005660	Cucumber (Gy14) v2	cgybwcgB125
ClCG02G005660	Melon (DHL92) v3.6.1	medwcgB272
ClCG02G005660	Melon (DHL92) v3.6.1	medwcgB513