Cp4.1LG04g08000 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGAGCCTTTCATTTGGGTTGCGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGTTTCTGCACGACCCTGAATCCCGAGAGGGTTTCGGACCTAAATTTTCTCTCACGATTCCTTGTTCTTTGATTTCATTCCATTATTTGCTTTTCTTCCATCTTTGATCCATTCGTAATGGGCGACCATCTTCTACATCTTCCTCATACGCCGTCGTCCATGTCGCCGCCGGTTGTAGATCGACAACCACCCTCCCCGTCCTCTGCCAGCGACTTGACTTGTTTGAACTCCCAATCCTACTCTTCTTCCCTTACTGTTGATCGCTTCAAGGATTTTCCTTCTCATCGCTGTCTGCAACTGGATGCGGTAAGTTTCCGACTCTTTTGCCTTTTCTTTTTTGCTGTTTCTTGGAAGTATGATGTGGGTTTTCCTCGGTATGAACGAGTTGTGTGTTGATTGTACTTTGTTTTCCCTTTCAACGTAGCACTTGGAGATCGTGTGGTGTGTGACCTATTTTTTGTGTACTGGAAACTAATATGTCTGATTATGAGAGATTTTTGTTGTTTCTTTAGATATTTTTAATGCTGAAGTGGTCTTGGTGTACCTCCCATTTGGGTTTATTTTAAACCTGCAATACAGGGGTGGTTGTACTTGTATATTATTGCAGTTTCAATGCCTTGTGTTCACCGTTTTTCCCTTTGTGCTTCAATGGCCATGGAGGAGAAATTCTTTTGCAATGCTCGGTTTTGTTGTTACTCTAATTTTTTTTCTTTTTCTGTGGAGTATCAGTTTTAGTGTTCGGGCTTCTTCAAATTAAATCATGGATGAATTTTGAGTCAAGTCTTTTAGATTCATTTTTTTTTAAATGAGCTTTGATTCTTTGAATTTCTCAAGTTTTAGCAGTTCTGTTTATACAGGATTCATTTTGAATATCTAAGCCTAAGGATTGAACTCTATATTAGGGAACAATTTGAAAATTTCATGTGAAAAAAATGGGGAATGGTTTCATTAATTGTCGATCAGAGTCATGTCCTCCTAATTTTAGTTAAAAAAAACTTTTGATCCAACTTTAGGGACATTTTTCTTTGAGGTGCAAATTTTCACAATTGAATGGGAAGGCGGAAATGGGGTTCTTAATTGAAAATTTATGAACAGGTGCAAACACATTGGACAGATGAGAAACACAGATCATATCTTGGTTCTTTAGAAGCATCTTTTGTTCAAGAGTTGCATCAATATAGACGCTTGCAAGCTTTGTCCTCAAAACAGAAAATGCGTTGCAGGCCGAGCATGCCTCATATATCTTCTTCAGAGGTGAGGCAATACATCCACAGCAAGAGTGGGAGTGAGTTCCCCTATCTCATTCCTCTACTTCCTTAATGATTTGCTCTTGTTATATATATTTTTTAGTTGATGGTCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGAAAGGATAGCCGATTATCCTGCTATTTTAGACGATGTTTGGATAAATCGTTTTCCTTCTGCAGGAAAGCAGTGTACTCCGGAGACTCCTGATCTCCTTGAAGAATCTGGAAGTTTTAGTGATAGGAGACACTTAAGAAACACGAAAAACTCCTATCGATCTGCCAGAAGTTCACAGCAGGTCCCTCCATGCTGTCGTGAGTCTTATACAATAATTACAGGTAATTTTCATTGATGTCATATGTTTTATATACTCTGTTATGTTAATTCTTAAATACTATTTTCTGTTGTCTAAGTACATTATATGCCTTCCCAGCCTCTGGCAGTGACACACACCTGAACTCAACGATCATTGATTCTACCTTCTAATTTATACATCAAAATCTGTAACCTATATCCGCACTATGCATGTACATAGTGATAGTGATTTGACTATATACTTCATGTTTTATTGTTGTTCCTTGAAATCATATTTTGTAATGGTGAAGGTTTTTGCAATAATTGTTCTAGTACTCACCATCTTTGGCACCCTTCAGGTGCACTCATTTTTCTGAGTTAGTTTTGTGATTGATGTACCAATATGGCGATTTCTTCGTGGTGTTCCCACTAGTTTGCCACTTTGCTTGCACCACATGAAGTCCTGCAAATTTTCTGTCCAATCTTATTACGTGTTTGTTGAATTTTGTGTTCACAAATGTAATCCCTCCGGAGGTAAGAAGAATATGAGAGGGTTTCTGGAGTTAAAGATTTGACTTACAGCATTTGAGTTGTCAAGTTGGTACATCAAGCTTAGGATATTGTGTTATCTTCTTAGCAATGAAAATTCTCTATATTCTAATATATTAATGGGATAGTTTTAACATGGTGATCTTCTTAGCACTGGAAATTCTCTATAATCAAATATGTTAATGGGATAGATTTAGTATGGTTATCTTCTTAGCAATGGAAATTCTTTATATTCTAATATATTAATGGGATAGTTTTAGCATTGTTATCTTCTTAGCAATGGTATTAATGGGACAGTTTTAACATGATTTACAGTGTTGTGATACGTTCTTCCCTTGCATGATTTTTAGTGTTTATGCTAGGGACACAAGATTTAGGGTCACAATTCTTCATGCAATTTCACAATTTATAATTCATGGATGACTGATTGCTTATCTTTTCTATTTGAAGTTGTTTGATGTATATTTATAAGTGAAAAAGTAGGAAGTATTTTATTTAAAGTTAGATGAACATTGTAGTACAATGTATTAGTGGAAAAAACGAATAAAACCGAGTAGATGTTATTATGATGGACTGCATTCTGGATATTGATGAACTGCAAGATGAAGCCAGAGTGATGGTGCTAATTCTAGGACAGTAGTCAGTTGCTGTTTCAGAATGAATAAGCAGACAATTCTTGGGATAATAACACTTTAGTTGAATTAGAGGAGCCATGAGGCATAAGGAATTAGCCTTCTTTCATGAATGAAAAGGATTCCGACATTCAATATTGGAGTTGAAGGAAGAGAAAAGAGCAGTCTTGGTGACACTCTAATGGGTCTCAATTTTCCTGTAGAGTAGAAGAACTGCTGAAGAATAGTTTCCCTGTTATGGGTCAAATGAACGACAAAATTATTTGAATCTTTGAGCATAAGGAGATTTAAAGCTTACCTTTGACAAAGCTGAATGACTCATGCATTCATAATTAAGCAGGAAATAACAAATAAATGTTTCTTAAGGGCACAATCCCGCTTGTTTAATTCAAGGATCAATCCCTTGGCTAGGTTGAATTCTTCCTGTCCCATCTCAAGTGCATGATGCCGTACTCTCTGTTAAAGAAGTCTCCTCGACATTGCCTGCTTGGAATTTAACACATCAACTTAATAAGATTCATAATTTCTATGGACCTTATGAATTTTCTACGTTTTTTTGGGGTGATGTAGGATGAGATGTTAGATAATCAGTCCAGTTTAGTATTTTGGATTTAATTAGTTCTTTGGTTATTTTATTGCAAGGCTATGAATACCCTCCGGGGCGCTTTTGAATATTATTTGAAATATCACTTCGTTTTTAGAGGATGTTCACTAACTGTTGTCAAGCTAACTTGGTGCTCTTTTGTCATTGTCTTCTATGCAGAAGTTTCCGATCAAAACTTTGTGGATAATCATCCAGGAGAGGTGTCTGGTGGCATGCCTAATGCAAAAAGATTAAAGAAAGCTTCTTCTGATTCTTCGGCCAATGACCAGGTACAACTCGGGATTGCCTTCGATTTTTTCTCTTTGGAAAACTTATAATTGCATTGTACGAGGTGTATCAAAGACCAAATTTGCTACTATTTGATCCTGCAGGTAGTACCATATAAAAGACCATCATTAGAAAGATAAAAGCCAGACGCCACACTGTCTTCAGAACATCCTCAAAACTTGATGCCTCCAAATTCAGATTTGTGTTACTTTATGAGATGGAGCTGACAACATTTCATTCCAACATGTGAAAAATGGTCTGTTCAAGCTCGCTAGCCAAATACGACATGGTTTTGTTTTCGATTCGAAAGAGCATTGTAAAGAAAACAAGGGAAATGGCGGCCATAATTCTTGACCAGAAGATGTGCAGCAAGAAGGAGAAAATATGTTTGTATATGGTACAAACTAAACTTTTTCCTAGTTCAAATATTGAGTTAAATATATGTTAACCCTTTCTTTTCTCCTGTTTTCCTTTTTCTTAGAGGTTGAAAAAATGGAAATTCTAATAGGGTGTAGGTTATTGAATATAGGTATTAGTTATACAGAAGCTAAGACACCCTGATAGTGAGATAGATACACACTTTTTTAGTTTGTTTCAAATACTCTCGTTTTGAACCTCTGTTAGGAATCTCAAGTGTAAATTATTATTAGGAGTCTTCCAACTGAAATTTTCATACATGTTCATACAACACCCTATATACGTTATGTTACACAACTTGTTTATTATTATTATTATTATTTCATATT TGGAGCCTTTCATTTGGGTTGCGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGTTTCTGCACGACCCTGAATCCCGAGAGGGTTTCGGACCTAAATTTTCTCTCACGATTCCTTGTTCTTTGATTTCATTCCATTATTTGCTTTTCTTCCATCTTTGATCCATTCGTAATGGGCGACCATCTTCTACATCTTCCTCATACGCCGTCGTCCATGTCGCCGCCGGTTGTAGATCGACAACCACCCTCCCCGTCCTCTGCCAGCGACTTGACTTGTTTGAACTCCCAATCCTACTCTTCTTCCCTTACTGTTGATCGCTTCAAGGATTTTCCTTCTCATCGCTGTCTGCAACTGGATGCGGTGCAAACACATTGGACAGATGAGAAACACAGATCATATCTTGGTTCTTTAGAAGCATCTTTTGTTCAAGAGTTGCATCAATATAGACGCTTGCAAGCTTTGTCCTCAAAACAGAAAATGCGTTGCAGGCCGAGCATGCCTCATATATCTTCTTCAGAGTTGATGGTCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGAAAGGATAGCCGATTATCCTGCTATTTTAGACGATGTTTGGATAAATCGTTTTCCTTCTGCAGGAAAGCAGTGTACTCCGGAGACTCCTGATCTCCTTGAAGAATCTGGAAGTTTTAGTGATAGGAGACACTTAAGAAACACGAAAAACTCCTATCGATCTGCCAGAAGTTCACAGCAGGTCCCTCCATGCTGTCGTGAGTCTTATACAATAATTACAGAAGTTTCCGATCAAAACTTTGTGGATAATCATCCAGGAGAGGTGTCTGGTGGCATGCCTAATGCAAAAAGATTAAAGAAAGCTTCTTCTGATTCTTCGGCCAATGACCAGGTAGTACCATATAAAAGACCATCATTAGAAAGATAAAAGCCAGACGCCACACTGTCTTCAGAACATCCTCAAAACTTGATGCCTCCAAATTCAGATTTGTGTTACTTTATGAGATGGAGCTGACAACATTTCATTCCAACATGTGAAAAATGGTCTGTTCAAGCTCGCTAGCCAAATACGACATGGTTTTGTTTTCGATTCGAAAGAGCATTGTAAAGAAAACAAGGGAAATGGCGGCCATAATTCTTGACCAGAAGATGTGCAGCAAGAAGGAGAAAATATGTTTGTATATGGTACAAACTAAACTTTTTCCTAGTTCAAATATTGAGTTAAATATATGTTAACCCTTTCTTTTCTCCTGTTTTCCTTTTTCTTAGAGGTTGAAAAAATGGAAATTCTAATAGGGTGTAGGTTATTGAATATAGGTATTAGTTATACAGAAGCTAAGACACCCTGATAGTGAGATAGATACACACTTTTTTAGTTTGTTTCAAATACTCTCGTTTTGAACCTCTGTTAGGAATCTCAAGTGTAAATTATTATTAGGAGTCTTCCAACTGAAATTTTCATACATGTTCATACAACACCCTATATACGTTATGTTACACAACTTGTTTATTATTATTATTATTATTTCATATT ATGGGCGACCATCTTCTACATCTTCCTCATACGCCGTCGTCCATGTCGCCGCCGGTTGTAGATCGACAACCACCCTCCCCGTCCTCTGCCAGCGACTTGACTTGTTTGAACTCCCAATCCTACTCTTCTTCCCTTACTGTTGATCGCTTCAAGGATTTTCCTTCTCATCGCTGTCTGCAACTGGATGCGGTGCAAACACATTGGACAGATGAGAAACACAGATCATATCTTGGTTCTTTAGAAGCATCTTTTGTTCAAGAGTTGCATCAATATAGACGCTTGCAAGCTTTGTCCTCAAAACAGAAAATGCGTTGCAGGCCGAGCATGCCTCATATATCTTCTTCAGAGTTGATGGTCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGAAAGGATAGCCGATTATCCTGCTATTTTAGACGATGTTTGGATAAATCGTTTTCCTTCTGCAGGAAAGCAGTGTACTCCGGAGACTCCTGATCTCCTTGAAGAATCTGGAAGTTTTAGTGATAGGAGACACTTAAGAAACACGAAAAACTCCTATCGATCTGCCAGAAGTTCACAGCAGGTCCCTCCATGCTGTCGTGAGTCTTATACAATAATTACAGAAGTTTCCGATCAAAACTTTGTGGATAATCATCCAGGAGAGGTGTCTGGTGGCATGCCTAATGCAAAAAGATTAAAGAAAGCTTCTTCTGATTCTTCGGCCAATGACCAGGTAGTACCATATAAAAGACCATCATTAGAAAGATAA MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSKQKMRCRPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPPCCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER
BLAST of Cp4.1LG04g08000 vs. TrEMBL
Match: A0A0A0K7Z2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073620 PE=4 SV=1) HSP 1 Score: 334.7 bits (857), Expect = 9.8e-89 Identity = 177/249 (71.08%), Postives = 199/249 (79.92%), Query Frame = 1
BLAST of Cp4.1LG04g08000 vs. TrEMBL
Match: A0A061E1R5_THECC (Cold regulated gene 27, putative isoform 2 OS=Theobroma cacao GN=TCM_007069 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 1.0e-24 Identity = 92/239 (38.49%), Postives = 130/239 (54.39%), Query Frame = 1
BLAST of Cp4.1LG04g08000 vs. TrEMBL
Match: A0A061DZZ1_THECC (Cold regulated gene 27, putative isoform 1 OS=Theobroma cacao GN=TCM_007069 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 2.2e-24 Identity = 92/239 (38.49%), Postives = 128/239 (53.56%), Query Frame = 1
BLAST of Cp4.1LG04g08000 vs. TrEMBL
Match: B9RYH7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0813320 PE=4 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 6.5e-24 Identity = 94/229 (41.05%), Postives = 117/229 (51.09%), Query Frame = 1
BLAST of Cp4.1LG04g08000 vs. TrEMBL
Match: A0A067L4Z6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_01597 PE=4 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 4.6e-22 Identity = 99/266 (37.22%), Postives = 123/266 (46.24%), Query Frame = 1
BLAST of Cp4.1LG04g08000 vs. TAIR10
Match: AT5G42900.1 (AT5G42900.1 cold regulated gene 27) HSP 1 Score: 62.0 bits (149), Expect = 6.2e-10 Identity = 62/199 (31.16%), Postives = 92/199 (46.23%), Query Frame = 1
BLAST of Cp4.1LG04g08000 vs. TAIR10
Match: AT4G33980.2 (AT4G33980.2 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 60.5 bits (145), Expect = 1.8e-09 Identity = 69/236 (29.24%), Postives = 103/236 (43.64%), Query Frame = 1
BLAST of Cp4.1LG04g08000 vs. NCBI nr
Match: gi|659109923|ref|XP_008454952.1| (PREDICTED: uncharacterized protein LOC103495241 isoform X1 [Cucumis melo]) HSP 1 Score: 341.7 bits (875), Expect = 1.1e-90 Identity = 182/249 (73.09%), Postives = 201/249 (80.72%), Query Frame = 1
BLAST of Cp4.1LG04g08000 vs. NCBI nr
Match: gi|449438404|ref|XP_004136978.1| (PREDICTED: uncharacterized protein LOC101204925 isoform X1 [Cucumis sativus]) HSP 1 Score: 334.7 bits (857), Expect = 1.4e-88 Identity = 177/249 (71.08%), Postives = 199/249 (79.92%), Query Frame = 1
BLAST of Cp4.1LG04g08000 vs. NCBI nr
Match: gi|659109926|ref|XP_008454953.1| (PREDICTED: uncharacterized protein LOC103495241 isoform X2 [Cucumis melo]) HSP 1 Score: 224.9 bits (572), Expect = 1.6e-55 Identity = 137/249 (55.02%), Postives = 157/249 (63.05%), Query Frame = 1
BLAST of Cp4.1LG04g08000 vs. NCBI nr
Match: gi|778725103|ref|XP_011658902.1| (PREDICTED: uncharacterized protein LOC101204925 isoform X2 [Cucumis sativus]) HSP 1 Score: 223.0 bits (567), Expect = 6.0e-55 Identity = 137/250 (54.80%), Postives = 159/250 (63.60%), Query Frame = 1
BLAST of Cp4.1LG04g08000 vs. NCBI nr
Match: gi|1009150240|ref|XP_015892914.1| (PREDICTED: uncharacterized protein LOC107427085 isoform X3 [Ziziphus jujuba]) HSP 1 Score: 134.0 bits (336), Expect = 3.6e-28 Identity = 95/248 (38.31%), Postives = 123/248 (49.60%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |