Carg22070 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22070
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Cold regulated gene 27, putative isoform 3
Location	Cucurbita_argyrosperma_scaffold_175 : 469269 .. 471952 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTCTCTCTCTCTCTCTCTCTCTTCGTATCTGCACGAGCCTGAATCCCGAGAGGGTTTCGGACCTAAATTTTCGCCCACGATTTCCATTTTTTCTTTGATTTGATTTTCTATATTTGGCTGTTCCGAACGATTTCGCTTTGTCTTTGATCTCCCGGAATGGTAGACGCTCATACGCCGTCGTCCATGTCGACGCCGGTTGCAGATCGAGAATCACCCATGTCGGTCTCTGCTAGCGACTTGACTCGTTTGAACTCCGAATCCTACTCTTCTTCCAATACCGTTGATGCGTCCGAGGGGGATTTGCCTTTGATGCCTTCTCATCATTGTTTTCAACTGGATGCGGTAAATTGTGACTCTATCTCTTTTGTTTTTGCTGTTTCTTGGAAGTATGATTTTGAGTTTTTCCTTGGTATGAACGAGTTTTTTGCGGACTGTGCTTTGTTTTTCTGCTTTGAACGTAGCGCCTGGAGTTCGTGTGACCTAGTTTTTGTGCTCTCGAAACTAATATCCTTGGTTACGAGTGATTCTTTTTCTCTTGGTGGTGTCTTTAGAAATTTTTAATGGTAGAGTGGTTTTGGGCACCTCCCATTTGAATGTTTAGTGTTAGGGCATATTCAAGTTAAATCGTGGATGAATTTCGAGTTAAGTCTTTGTGATTCAATTTTGTTTTTTTGTTTTTAAAAGAAAACATTTTACTCTTTGAATTCCCCTTGTTTTAGTTGTTATTTTCTCTTGTAGGACACTCATTTTATTTGTATCAAATGTTTTAGCTCTAAGTTTTAACTCATATTAAGGAACAATTTGAAAATTTCACGTGAAACATGAGGAATGGTTTTACTAATTGTTTTACTAATTGGAAATTTCAGGTGCAAACACATTGGACAGAAGAGAAACACAGATTATTTCTTGATTCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCGATATAGGCATCTTCGTGCTTTGTCCTCGAAACAGAAAATGCGTCGGAAGCCGATCATGCCTAATATATCTTCTTCAGAGGTGAGGCAATACATCCACAGCAAGAGTGGGAGTGAGTTCCCTATATCATTCCTCTACGTCCTTAATGATTTCCTCTTGTTTTATTTCTTTTCTTAGTCGATGGTCCTTCAGGATGCCTCCTGGCAGAAGGCTAACGTTGGGAGAACTGATCCTTTATTGGATAAGACTGCCGATTCTCCCGCTATTTTAGAGGATGTATGGATAAATCATTTCCCTTCTGCAGGAAATCAGTGTACTCTGGAAACTACTGATGTTCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGTCACATAAGAAACAAGACAAACTCCCGTCAATCTGCCAGAAGTTCTCAGCAGATTCCTCCATGCTGTCGTGATTCTCATACAATCGTTACAGGTACCCGAACACATTGTTCATGTTTTCCAAACCCTTTTCCAGAGTCTCACTTTTCGTTGATTCTACCGTCTAATATACTTAAAATTTGTAATCTATTCCCTTATTATGCATGTACACTATTGATGATGATCGGCCATATGCTTCATACTTTGTTGTTGTGATCTTCCAATCATATTTCGTAATGTTGAAGGTGTTTGCAATAATTATACTAGTAGTAGTATTGACTTAAGCACCATTTAGATGCACTATTTCTCTGATTTAAGTTTGTGTTGGTGTACCAATATGACCATTACTTTGTGATGTTACCATTAGTTGCCACATTGACTGCACCACTTGAAGTCCTGCAAACGTTTTTGCTTGAATTTTGTGTTCATCAAATGTGTTTCCTATGAGAGGGTTTCTGAAATACGACTTAGTGCATCCGAGTTGTAAAATTTGTACGTCAAGCTTAGGATATTATGTTATCTTCCTAGCAATGGAAAATCTATATGTTCTTAATCGGATAGTTTCAATTTGGTTTTCAGTGTTTTTGTAACTTTGTTCCCTTAGCTTGATTTATAGTGTTTACACCTGGGTCACAAGATTTAACGTCACAGTTCTTCATTCTATGTTACAATTAAGAACTCACGGGCAAACTGATTGCGTATCTTATCAATTTGAAGTTGTTTGATGTATATTTATGCTTGAAGAAGTAGAAGTCCTTTATGTAAAGTTGGATGAACATTGTTGTACGGGAAAAAAAAAGAGAATAAAACCGAGTAGAAATTACTAGGATGGACAGCATTCTGATTATTGATGAACCTCTAGATGAAGCCAGGCTAATGTAGACTGATTCTAGGACAGTAGCTGTTTAGGGATGAATCAAAGCAGAAATTCTTGGGTTCATAACATTTCAGTCAAATTAGAGCATCCATGTTAAGGAATTTGCCTTCTTTTATGAATGTTTAATGCTTGATGTGATTTTTCTGTTTTCATACTAACTTAGTGTCTATTATCTCTTCATTGCAGAAGTTTCAGATCAAAACTTTGTGGATACTCATCCAGGAGAGTTGTCTGATGGCACGCCCATTACAAAACGATTAAAGAAAGCTTCCTCTGATTCTTCAGGCAACAACCGGGTAAAACTCGGGATTGCCATTGATTTCTCTTTGGAGAACCAATAATTGCATTTTACAAATGATCCAAGACCGAATATGCTGCTATTTCATCTCTTAGGTTGCACCATATAAAAGATTATCATCAGAAAGATAAAAGCCAGATGCAAAAACTTTGTGCCTCC

mRNA sequence

TCTCTCTCTCTCTCTCTCTCTCTTCGTATCTGCACGAGCCTGAATCCCGAGAGGGTTTCGGACCTAAATTTTCGCCCACGATTTCCATTTTTTCTTTGATTTGATTTTCTATATTTGGCTGTTCCGAACGATTTCGCTTTGTCTTTGATCTCCCGGAATGGTAGACGCTCATACGCCGTCGTCCATGTCGACGCCGGTTGCAGATCGAGAATCACCCATGTCGGTCTCTGCTAGCGACTTGACTCGTTTGAACTCCGAATCCTACTCTTCTTCCAATACCGTTGATGCGTCCGAGGGGGATTTGCCTTTGATGCCTTCTCATCATTGTTTTCAACTGGATGCGGTGCAAACACATTGGACAGAAGAGAAACACAGATTATTTCTTGATTCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCGATATAGGCATCTTCGTGCTTTGTCCTCGAAACAGAAAATGCGTCGGAAGCCGATCATGCCTAATATATCTTCTTCAGAGGTGAGGCAATACATCCACAGCAAGAGTGGGAGTGAGTTCCCTATATCATTCCTCTACTCGATGGTCCTTCAGGATGCCTCCTGGCAGAAGGCTAACGTTGGGAGAACTGATCCTTTATTGGATAAGACTGCCGATTCTCCCGCTATTTTAGAGGATGTATGGATAAATCATTTCCCTTCTGCAGGAAATCAGTGTACTCTGGAAACTACTGATGTTCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGTCACATAAGAAACAAGACAAACTCCCGTCAATCTGCCAGAAGTTCTCAGCAGATTCCTCCATGCTGTCGTGATTCTCATACAATCGTTACAGAAGTTTCAGATCAAAACTTTGTGGATACTCATCCAGGAGAGTTGTCTGATGGCACGCCCATTACAAAACGATTAAAGAAAGCTTCCTCTGATTCTTCAGGCAACAACCGGGTAAAACTCGGGATTGCCATTGATTTCTCTTTGGAGAACCAATAATTGCATTTTACAAATGATCCAAGACCGAATATGCTGCTATTTCATCTCTTAGGTTGCACCATATAAAAGATTATCATCAGAAAGATAAAAGCCAGATGCAAAAACTTTGTGCCTCC

Coding sequence (CDS)

ATGGTAGACGCTCATACGCCGTCGTCCATGTCGACGCCGGTTGCAGATCGAGAATCACCCATGTCGGTCTCTGCTAGCGACTTGACTCGTTTGAACTCCGAATCCTACTCTTCTTCCAATACCGTTGATGCGTCCGAGGGGGATTTGCCTTTGATGCCTTCTCATCATTGTTTTCAACTGGATGCGGTGCAAACACATTGGACAGAAGAGAAACACAGATTATTTCTTGATTCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCGATATAGGCATCTTCGTGCTTTGTCCTCGAAACAGAAAATGCGTCGGAAGCCGATCATGCCTAATATATCTTCTTCAGAGGTGAGGCAATACATCCACAGCAAGAGTGGGAGTGAGTTCCCTATATCATTCCTCTACTCGATGGTCCTTCAGGATGCCTCCTGGCAGAAGGCTAACGTTGGGAGAACTGATCCTTTATTGGATAAGACTGCCGATTCTCCCGCTATTTTAGAGGATGTATGGATAAATCATTTCCCTTCTGCAGGAAATCAGTGTACTCTGGAAACTACTGATGTTCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGTCACATAAGAAACAAGACAAACTCCCGTCAATCTGCCAGAAGTTCTCAGCAGATTCCTCCATGCTGTCGTGATTCTCATACAATCGTTACAGAAGTTTCAGATCAAAACTTTGTGGATACTCATCCAGGAGAGTTGTCTGATGGCACGCCCATTACAAAACGATTAAAGAAAGCTTCCTCTGATTCTTCAGGCAACAACCGGGTAAAACTCGGGATTGCCATTGATTTCTCTTTGGAGAACCAATAA

Protein sequence

MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ

Homology

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BLAST of Carg22070 vs. NCBI nr
Match: XP_022952080.1 (uncharacterized protein LOC111454842 isoform X1 [Cucurbita moschata])

HSP 1 Score: 502.3 bits (1292), Expect = 1.1e-138
Identity = 259/279 (92.83%), Postives = 259/279 (92.83%), Query Frame = 0


Query: 1   MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60
           MVDAHTPSSMS PVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL
Sbjct: 1   MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60

Query: 61  DAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSEVRQYI 120
           DAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSE     
Sbjct: 61  DAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSE----- 120

Query: 121 HSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQC 180
                         SMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQC
Sbjct: 121 --------------SMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQC 180

Query: 181 TLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHP 240
           TLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHP
Sbjct: 181 TLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHP 240

Query: 241 GELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ 280
           GELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ
Sbjct: 241 GELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ 260

[Close]

BLAST of Carg22070 vs. NCBI nr
Match: XP_022952081.1 (uncharacterized protein LOC111454842 isoform X2 [Cucurbita moschata])

HSP 1 Score: 477.6 bits (1228), Expect = 2.8e-131
Identity = 246/266 (92.48%), Postives = 246/266 (92.48%), Query Frame = 0


Query: 1   MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60
           MVDAHTPSSMS PVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL
Sbjct: 1   MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60

Query: 61  DAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSEVRQYI 120
           DAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSE     
Sbjct: 61  DAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSE----- 120

Query: 121 HSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQC 180
                         SMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQC
Sbjct: 121 --------------SMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQC 180

Query: 181 TLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHP 240
           TLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHP
Sbjct: 181 TLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHP 240

Query: 241 GELSDGTPITKRLKKASSDSSGNNRV 267
           GELSDGTPITKRLKKASSDSSGNNRV
Sbjct: 241 GELSDGTPITKRLKKASSDSSGNNRV 247

[Close]

BLAST of Carg22070 vs. NCBI nr
Match: XP_023553838.1 (uncharacterized protein LOC111811294 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 469.5 bits (1207), Expect = 7.7e-129
Identity = 243/279 (87.10%), Postives = 248/279 (88.89%), Query Frame = 0


Query: 1   MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60
           MVDAHTPSSMS PVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL
Sbjct: 1   MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60

Query: 61  DAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSEVRQYI 120
           DAVQTHWT+EKHRLFLDSLEASFVQDLHRYRHLRA SSKQK+RRK IMPNISSSE     
Sbjct: 61  DAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNISSSE----- 120

Query: 121 HSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQC 180
                         S+VLQDASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAG  C
Sbjct: 121 --------------SLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPC 180

Query: 181 TLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHP 240
           TLETTDVLEECGSCSDR HIRNKTNS QSARSSQQIP CCRDSHTI TEVSDQNFVDTHP
Sbjct: 181 TLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSCCRDSHTIFTEVSDQNFVDTHP 240

Query: 241 GELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ 280
           GELSDGTPITKRLKKASSDSSGN+RVKLGIA D SLENQ
Sbjct: 241 GELSDGTPITKRLKKASSDSSGNDRVKLGIAFDLSLENQ 260

[Close]

BLAST of Carg22070 vs. NCBI nr
Match: XP_022972372.1 (uncharacterized protein LOC111470946 isoform X1 [Cucurbita maxima])

HSP 1 Score: 469.2 bits (1206), Expect = 1.0e-128
Identity = 244/279 (87.46%), Postives = 248/279 (88.89%), Query Frame = 0


Query: 1   MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60
           MVDAHTPSSMS PVADRES MSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL
Sbjct: 1   MVDAHTPSSMSPPVADRESSMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60

Query: 61  DAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSEVRQYI 120
           DAVQTHWT+EKHRLFLD+LEASFVQDLHRYRHLRA SSKQKMRRKPIMPNISSSE     
Sbjct: 61  DAVQTHWTDEKHRLFLDALEASFVQDLHRYRHLRAFSSKQKMRRKPIMPNISSSE----- 120

Query: 121 HSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQC 180
                         SMVLQDASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAGNQ 
Sbjct: 121 --------------SMVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGNQR 180

Query: 181 TLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHP 240
           T ETTDVLEECGSCSDRSHIRNKTNS QSARSSQQIPPCCRDSHTIV EVSDQNFVDTHP
Sbjct: 181 TPETTDVLEECGSCSDRSHIRNKTNSCQSARSSQQIPPCCRDSHTIVAEVSDQNFVDTHP 240

Query: 241 GELSDGTPITKRLKKASSDSSGNNRVKLGIAIDFSLENQ 280
           GELS GTPITKRLKKASSDS GN+RVKLGIA D SLENQ
Sbjct: 241 GELSGGTPITKRLKKASSDSLGNDRVKLGIAFDLSLENQ 260

[Close]

BLAST of Carg22070 vs. NCBI nr
Match: XP_023553839.1 (uncharacterized protein LOC111811294 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 448.7 bits (1153), Expect = 1.4e-122
Identity = 232/266 (87.22%), Postives = 237/266 (89.10%), Query Frame = 0


Query: 1   MVDAHTPSSMSTPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60
           MVDAHTPSSMS PVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL
Sbjct: 1   MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQL 60

Query: 61  DAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSEVRQYI 120
           DAVQTHWT+EKHRLFLDSLEASFVQDLHRYRHLRA SSKQK+RRK IMPNISSSE     
Sbjct: 61  DAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNISSSE----- 120

Query: 121 HSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQC 180
                         S+VLQDASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAG  C
Sbjct: 121 --------------SLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPC 180

Query: 181 TLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDTHP 240
           TLETTDVLEECGSCSDR HIRNKTNS QSARSSQQIP CCRDSHTI TEVSDQNFVDTHP
Sbjct: 181 TLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSCCRDSHTIFTEVSDQNFVDTHP 240

Query: 241 GELSDGTPITKRLKKASSDSSGNNRV 267
           GELSDGTPITKRLKKASSDSSGN+RV
Sbjct: 241 GELSDGTPITKRLKKASSDSSGNDRV 247

[Close]

BLAST of Carg22070 vs. TAIR10
Match: AT5G42900.1 (cold regulated gene 27)

HSP 1 Score: 57.0 bits (136), Expect = 2.2e-08
Identity = 60/181 (33.15%), Postives = 80/181 (44.20%), Query Frame = 0


Query: 63  VQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSEVRQYIHS 122
           ++T WT EKH L+L S+EASFV  L  Y  L AL   +         N+S S       +
Sbjct: 44  METEWTNEKHSLYLKSMEASFVDQL--YNSLGALGKNE---------NVSES-------T 103

Query: 123 KSGSEFPISFLYSMVLQDASWQKANVGRTDPLLD--KTADSPAILEDVWINHF-PSAGNQ 182
           + GS    S     VL D  WQK NV + +  ++     +S   L   WI H+ P    Q
Sbjct: 104 RFGSGRKPSQEQFKVLHDGFWQKINVKQPEHRINGRHGGNSHEFLRSPWIKHYKPLVKTQ 163

Query: 183 CTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTI---VTEVSDQNFV 238
             +  TD  E        S+ +    S  SA S +Q+    RD   I     EVSDQNFV
Sbjct: 164 --IPVTD--EPENQVVSSSNGKKGICSSGSASSLKQLSSHSRDHDQISVGEAEVSDQNFV 202

[Close]

BLAST of Carg22070 vs. TrEMBL
Match: tr|A0A1S3BZU8|A0A1S3BZU8_CUCME (uncharacterized protein LOC103495241 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495241 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 9.1e-86
Identity = 176/268 (65.67%), Postives = 203/268 (75.75%), Query Frame = 0


Query: 1   MVDAHTPSSMSTPVADRESPM--SVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCF 60
           M D+HTPS +S+P+ADR+SPM  + S +D T  NSES+SSS TVD S+     + SHHC 
Sbjct: 1   MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSK---RFLDSHHCL 60

Query: 61  QLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSEVRQ 120
           QLDA QTHWT+EKHR +LDSLEASFVQ LH++R + ALSSKQKMRRKPIM + SSSE+  
Sbjct: 61  QLDAEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSEL-- 120

Query: 121 YIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGN 180
                            MVLQDASWQKAN+GR DPLLDKTADSPAILED+WINHFPSAG 
Sbjct: 121 -----------------MVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGK 180

Query: 181 QCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDT 240
           QC+LET D+LEECGSCSDR HIR+ TNS  SAR+SQQ  PCC +S+TI+TEVSDQNFVD 
Sbjct: 181 QCSLETPDLLEECGSCSDRRHIRHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDN 240

Query: 241 HPGELSDGTPITKRLKKASSDSSGNNRV 267
            PGELS G P  KRLKKASS    N +V
Sbjct: 241 QPGELSGGMPTAKRLKKASSGFLDNAQV 246

[Close]

BLAST of Carg22070 vs. TrEMBL
Match: tr|A0A0A0K7Z2|A0A0A0K7Z2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073620 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.5e-68
Identity = 153/268 (57.09%), Postives = 180/268 (67.16%), Query Frame = 0


Query: 1   MVDAHTPSSMSTPVADRESPMSVSA--SDLTRLNSESYSSSNTVDASEGDLPLMPSHHCF 60
           M D+HTPS +S P+ADR+SPM +++  +D T  NSES+SSS T+D S+            
Sbjct: 1   MGDSHTPSFLSPPLADRQSPMPLASATTDSTGFNSESHSSSITLDGSK---HFFXXXXXX 60

Query: 61  QLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSEVRQ 120
                                 ASFVQDLH++R + ALS KQKMRRKPI P+ISSSE+  
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXASFVQDLHQHRPMHALSPKQKMRRKPIRPDISSSEL-- 120

Query: 121 YIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGN 180
                            MVLQDASWQKAN+GR DPLLDKTADSPAILED+WINHFPSAG 
Sbjct: 121 -----------------MVLQDASWQKANIGRNDPLLDKTADSPAILEDLWINHFPSAGK 180

Query: 181 QCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDT 240
           QC+LET D+LEEC SCSDR HIR  TNS +SAR+SQ   PCC +S+TI+TEVSDQNFVD 
Sbjct: 181 QCSLETPDLLEECESCSDRRHIRYMTNSCRSARNSQPTRPCCCNSYTIITEVSDQNFVDN 240

Query: 241 HPGELSDGTPITKRLKKASSDSSGNNRV 267
            PGELS G PI KRLKKASSD S + +V
Sbjct: 241 QPGELSSGMPIAKRLKKASSDFSDSAQV 246

[Close]

BLAST of Carg22070 vs. TrEMBL
Match: tr|A0A1S3BZQ8|A0A1S3BZQ8_CUCME (uncharacterized protein LOC103495241 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495241 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 2.7e-61
Identity = 145/268 (54.10%), Postives = 171/268 (63.81%), Query Frame = 0


Query: 1   MVDAHTPSSMSTPVADRESPM--SVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCF 60
           M D+HTPS +S+P+ADR+SPM  + S +D T  NSES+SSS TVD S+     + SHHC 
Sbjct: 1   MGDSHTPSFVSSPLADRQSPMPPASSTTDSTGFNSESHSSSITVDGSK---RFLDSHHCL 60

Query: 61  QLDAVQTHWTEEKHRLFLDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSEVRQ 120
           QLDA QTHWT+EKHR +LDSLEASFVQ LH++R + ALSSKQKMRRKPIM + SSSEVRQ
Sbjct: 61  QLDAEQTHWTDEKHRSYLDSLEASFVQGLHQHRRMHALSSKQKMRRKPIMLDTSSSEVRQ 120

Query: 121 YIHSKSGSEFPISFLYSMVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGN 180
           +IH KSG +                                                   
Sbjct: 121 HIHKKSGRK--------------------------------------------------- 180

Query: 181 QCTLETTDVLEECGSCSDRSHIRNKTNSRQSARSSQQIPPCCRDSHTIVTEVSDQNFVDT 240
           QC+LET D+LEECGSCSDR HIR+ TNS  SAR+SQQ  PCC +S+TI+TEVSDQNFVD 
Sbjct: 181 QCSLETPDLLEECGSCSDRRHIRHMTNSCGSARNSQQTRPCCFNSYTIITEVSDQNFVDN 214

Query: 241 HPGELSDGTPITKRLKKASSDSSGNNRV 267
            PGELS G P  KRLKKASS    N +V
Sbjct: 241 QPGELSGGMPTAKRLKKASSGFLDNAQV 214

[Close]

BLAST of Carg22070 vs. TrEMBL
Match: tr|A0A2N9IFZ1|A0A2N9IFZ1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50892 PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 9.2e-30
Identity = 99/255 (38.82%), Postives = 138/255 (54.12%), Query Frame = 0


Query: 26  SDLTRLNSESYS-SSNT-----VDASEGDLPL----MPSHHCFQLDAVQTHWTEEKHRLF 85
           ++LTR NS S + ++NT     + +    LPL    + +     +  + T WT+EKHRL+
Sbjct: 20  TELTRKNSHSSAITANTSKQPALHSGNAKLPLDISPLLNQDMLMVPHLLTEWTDEKHRLY 79

Query: 86  LDSLEASFVQDLHRYRHLRALSSKQKMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYS 145
           LDSLEASFV +LHR   LR L S+    R      + SS+  Q     S  +F       
Sbjct: 80  LDSLEASFVTELHRSMRLRGLRSQDNTSR------LYSSKEPQVKTQNSSDQF------- 139

Query: 146 MVLQDASWQKANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCS 205
           +VL+D  WQK N GR DP  D TADS  +L   WI  F S+G Q T+ + DV E    C+
Sbjct: 140 IVLRDVCWQKINFGRIDPFSDSTADSHVVLRTPWIRRFTSSGKQRTVRSPDVREHDMVCN 199

Query: 206 DRSHIR-NKTNSRQSARSSQQIPPC---CRDSHTIVTEVSDQNFVDTHPGELSDGTPITK 265
           + +H++ N T+S  S+R   Q   C    +DS   +TEVSDQNF D   GE S    + K
Sbjct: 200 EGAHLKDNLTSSFGSSRGFGQYSVCRLRHQDSVGSITEVSDQNFEDEDQGEKSSCASMAK 259

Query: 266 RLKKASSDSSGNNRV 267
           RLK A+++ S N++V
Sbjct: 260 RLKTATAEGSSNDQV 261

[Close]

BLAST of Carg22070 vs. TrEMBL
Match: tr|A0A2P4J8J3|A0A2P4J8J3_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_72825 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 6.2e-26
Identity = 97/245 (39.59%), Postives = 124/245 (50.61%), Query Frame = 0


Query: 26  SDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTEEKHRLFLDSLEASFVQ 85
           ++LT  NS+  SS+ TVDA     P  P           T WT+EKH  +LDSLEASFV 
Sbjct: 20  AELTCTNSD--SSAITVDAVASTRP-SPHSQIPPPKGQLTEWTDEKHSSYLDSLEASFVT 79

Query: 86  DLHRYRHLRALSSKQKMRRKPIMPNISSSEVRQYIHSKSGSEFPISFLYSMVLQDASWQK 145
           +LHR  HLR L SK  M R       SSSE  Q     S  +F        VL+D  WQK
Sbjct: 80  ELHRSMHLRGLRSKDNMWR------ASSSEKPQAKTRNSSDQF-------FVLRDGCWQK 139

Query: 146 ANVGRTDPLLDKTADSPAILEDVWINHFPSAGNQCTLETTDVLEECGSCSDRSHIR-NKT 205
            N  R D   D +ADS  +L   WI  F S+  Q T+ + D       C+    ++ N T
Sbjct: 140 INFERNDTFSDSSADSHVVLGTPWIRRFTSSSKQRTVRSPDARGHGMVCNKAVLLKENFT 199

Query: 206 NSRQSARSSQQ---IPPCCRDSHTIVTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSS 265
           +S  S R  +Q     PC +D    +TEVSDQNF D   GE+S    + KRLK AS D++
Sbjct: 200 SSCGSLRGLEQHSVCLPCHQDLVGNITEVSDQNFEDEDQGEMSSSASMVKRLKTASVDAT 248

Query: 266 GNNRV 267
            N++V
Sbjct: 260 NNDQV 248

The following BLAST results are available for this feature:

BLAST of Carg22070 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022952080.1	1.1e-138	92.83	uncharacterized protein LOC111454842 isoform X1 [Cucurbita moschata]	[more]
XP_022952081.1	2.8e-131	92.48	uncharacterized protein LOC111454842 isoform X2 [Cucurbita moschata]	[more]
XP_023553838.1	7.7e-129	87.10	uncharacterized protein LOC111811294 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022972372.1	1.0e-128	87.46	uncharacterized protein LOC111470946 isoform X1 [Cucurbita maxima]	[more]
XP_023553839.1	1.4e-122	87.22	uncharacterized protein LOC111811294 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg22070 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G42900.1	2.2e-08	33.15	cold regulated gene 27	[more]

BLAST of Carg22070 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg22070 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BZU8\|A0A1S3BZU8_CUCME	9.1e-86	65.67	uncharacterized protein LOC103495241 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0K7Z2\|A0A0A0K7Z2_CUCSA	6.5e-68	57.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073620 PE=4 SV=1	[more]
tr\|A0A1S3BZQ8\|A0A1S3BZQ8_CUCME	2.7e-61	54.10	uncharacterized protein LOC103495241 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2N9IFZ1\|A0A2N9IFZ1_FAGSY	9.2e-30	38.82	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50892 PE=4 SV=1	[more]
tr\|A0A2P4J8J3\|A0A2P4J8J3_QUESU	6.2e-26	39.59	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_72825 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22070-RA	Carg22070-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 196..218
None	No IPR available	PANTHER	PTHR33676:SF4	SUBFAMILY NOT NAMED	coord: 25..265
None	No IPR available	PANTHER	PTHR33676	FAMILY NOT NAMED	coord: 25..265

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22070	Cla016015	Watermelon (97103) v1	carwmB0198
Carg22070	Csa7G073620	Cucumber (Chinese Long) v2	carcuB0233
Carg22070	MELO3C018454	Melon (DHL92) v3.5.1	carmeB0213
Carg22070	ClCG02G005970	Watermelon (Charleston Gray)	carwcgB0203
Carg22070	CSPI07G07590	Wild cucumber (PI 183967)	carcpiB0239
Carg22070	Cucsa.219820	Cucumber (Gy14) v1	carcgyB0251
Carg22070	CmaCh19G006010	Cucurbita maxima (Rimu)	carcmaB0288
Carg22070	CmaCh11G017470	Cucurbita maxima (Rimu)	carcmaB0287
Carg22070	CmoCh19G006190	Cucurbita moschata (Rifu)	carcmoB0293
Carg22070	CmoCh11G013660	Cucurbita moschata (Rifu)	carcmoB0292
Carg22070	Lsi03G004970	Bottle gourd (USVL1VR-Ls)	carlsiB187
Carg22070	Cp4.1LG15g04790	Cucurbita pepo (Zucchini)	carcpeB0295
Carg22070	Cp4.1LG04g08000	Cucurbita pepo (Zucchini)	carcpeB0296
Carg22070	CsGy7G007160	Cucumber (Gy14) v2	carcgybB0222
Carg22070	MELO3C018454.2	Melon (DHL92) v3.6.1	carmedB0218
Carg22070	CsaV3_7G008550	Cucumber (Chinese Long) v3	carcucB0237
Carg22070	Cla97C02G032940	Watermelon (97103) v2	carwmbB0212
Carg22070	Bhi05G000923	Wax gourd	carwgoB0259

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg22070	Carg26410	Silver-seed gourd	carcarB246

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22070	Cucumber (Chinese Long) v2	carcuB0232
Carg22070	Cucumber (Chinese Long) v3	carcucB0236
Carg22070	Bottle gourd (USVL1VR-Ls)	carlsiB186
Carg22070	Melon (DHL92) v3.5.1	carmeB0215
Carg22070	Melon (DHL92) v3.6.1	carmedB0220
Carg22070	Watermelon (Charleston Gray)	carwcgB0204
Carg22070	Watermelon (97103) v1	carwmB0197
Carg22070	Watermelon (97103) v2	carwmbB0211
Carg22070	Watermelon (97103) v2	carwmbB0213
Carg22070	Wax gourd	carwgoB0258
Carg22070	Silver-seed gourd	carcarB244
Carg22070	Cucumber (Gy14) v2	carcgybB0221
Carg22070	Cucumber (Gy14) v1	carcgyB0253