CmoCh19G006190 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCGTATCTGCACGAGCCTGAATCCCGAGAGGGTTTCGGACCTAAATTTTCGCCCACGATTTCCATTTTTTCTTTGATTTGATTTTCTATATTTGGCTGTTCCGAACGATTTCGCTTTGTCTTTGATCTCCCGGAATGGTAGACGCTCATACGCCGTCGTCCATGTCGCCGCCGGTTGCAGATCGAGAATCACCCATGTCGGTCTCTGCTAGCGACTTGACTCGTTTGAACTCCGAATCCTACTCTTCTTCCAATACCGTTGATGCGTCCGAGGGGGATTTGCCTTTGATGCCTTCTCATCATTGTTTTCAACTGGATGCGGTAAATTGTGACTCTATCTCTTTTGTTTTTGCTGTTTCTTGGAAGTATGATTTTGAGTTTTTCCTTGGTATGAACGAGTTTTTTGCGGACTGTGCTTTGTTTTTCTGCTTTGAACGTAGCGCCTGGAGTTCGTGTGACCTAGTTTTTGTGCTCTCGAAACTAATATCCTTGGTTACGAGTGATTCTTTTTCTCTTGGTGGTGTCTTTAGAAATTTTTAATGGTAGAGTGGTTTTGGGCACCTCCCATTTGAATGTTTAGTGTTAGGGCATATTCAAGTTAAATCGTGGATGAATTTCGAGTTAAGTCTTTGTGATTCAATTTTGTTTTTTTGTTTTTAAAAGAAAACATTTTACTCTTTGAATTCCCCTTGTTTTAGTTGTTATTTTCTCTTGTAGGACACTCATTTTATTTGTATCAAATGTTTTAGCTCTAAGTTTTAACTCATATTAAGGAACAATTTGAAAATTTCACGTGAAACATGAGGAATGGTTTTACTAATTGTTTTACTAATTGGAAATTTCAGGTGCAAACACATTGGACAGAAGAGAAACACAGATTATTTCTTGATTCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCGATATAGGCATCTTCGTGCTTTGTCCTCGAAACAGAAAATGCGTCGGAAGCCGATCATGCCTAATATATCTTCTTCAGAGGTGAGGCAATACATCCACAGCAAGAGTGGGAGTGAGTTCCCTATATCATTCCTCTACGTCCTTAATGATTTCCTCTTGTTTTATTTCTTTTCTTAGTCGATGGTCCTTCAGGATGCCTCCTGGCAGAAGGCTAACGTTGGGAGAACTGATCCTTTATTGGATAAGACTGCCGATTCTCCCGCTATTTTAGAGGATGTATGGATAAATCATTTCCCTTCTGCAGGAAATCAGTGTACTCTGGAAACTACTGATGTTCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGTCACATAAGAAACAAGACAAACTCCCGTCAATCTGCCAGAAGTTCTCAGCAGATTCCTCCATGCTGTCGTGATTCTCATACAATCGTTACAGGTACCCGAACACATTGTTCATGTTTTCCAAACCCTTTTCCAGAGTCTCACTTTTCGTTGATTCTACCGTCTAATATACTTAAAATTTGTAATCTATTCCCTTATTATGCATGTACACTATTGATGATGATCGGCCATATGCTTCATACTTTGTTGTTGTGATCTTCCAATCATATTTCGTAATGTTGAAGGTGTTTGCAATAATTATACTAGTAGTAGTATTGACTTAAGCACCATTTAGATGCACTATTTTTCTGATTTAAGTTTGTGTTGGTTTACCAATATGACCATTACTTTGTGATGTTACCATTAGTTGCCACATTGACTGCACCACTTGAAGTCCTGCAAACGTTTTTGCTTGAATTTTGTGTTCATCAAATGTGTTTCCTATGAGAGGGTTTCTGAAATACGACTTAGTGCATCCGAGTTGTAAAATTTGTACGTCAAGCTTAGGATATTATGTTATCTTCCTAGCAATAGAAAATCTATATGTTCTTAATCGGATAGTTTCAATTTGGTTTTCAGTGTTTTGGTAACTTTGTTCCCTTAGCTTGATTTATAGTGTTTACACCTGGGTCACAAGATTTAACGTCACAGTTCTTCATTCTATGTTACAATTAAGAACTCACGGGCAAACTGATTGCGTATCTTATCAATTTGAAGTTGTTTGATGTATATTTATGCTTGAAGAAGTAGAAGTCCTTTATGTAAAGTTGGATGAACATTGTTGTACGGGAAAAAAAAAGAGAATAAAACCGAGTAGAAATTACTAGGATGGACAGCATTCTGATTATTGATGAACCTCTAGATGAAGCCAGGCTAATGTAGACTAATTCTAGGACAGTAGCTGTTTAGGGATGAATCAAAGCAGAAATTCTTGGGTTCATAACATTTCAGTCAAATTAGAGCATCCATGTTAAGGAATTTGCCTTCTTTTATGAATGTTTAATGCTTGATGTGATTTTTCTGTTTTCATACTAACTTAGTGTCTATTATCTCTTCATTGCAGAAGTTTCAGATCAAAACTTTGTGGATACTCATCCAGGAGAGTTGTCTGATGGCACGCCCATTACAAAACGATTAAAGAAAGCTTCCTCTGATTCTTCAGGCAACAACCGGGTAAAACTCGGGATTGCCATTGATTTCTCTTTGGAGAACCAATAATTGCATTTTACAAATGATCCAAGACCGAATATGCTGCTATTTCATCTCTTAGGTTGCACCATATAAAAGATTATCATCAGAAAGATAAAAGCCAGATGCAAAAACTTTGTGCCTCCAAATTCAGATTTGTGTTACAGTGCAAGAGGGAGCTGACAACAACTCATTCCAACATGTGAAGACACCCGGCTGTTCAAGTTCGTTATCCGAACGCAACACGATTCTGTTTTCCTTCCGAAAGAGCATCGAAAAGTAAATAAGGGAAGTGACAACAATAATTCTACCAGAAGATCTACGGCTGGAAGGAGAAAATACGTTTGTTTATGGTACAAACTAAACTTTTTCTTAGTTCATCAAATATAGAGTGAAAATATATGTTAACCCTTTCATTTCTCCTGCTTTTTTTCTTCTTAGAGTTTGAAGAAATGGAAATTCCAATAGATTTAGGGTATGAATATACATGATATAGAGAAAGCTAGACACCGACCCTGATACTGATATAGATATACACACCCTTTTACATCTGTTTTGAAATACTCTCATTTTGAAGTTCAGGTAGAGACCTCAAATGTAAATTACTATTACATAAAACAATAGATTTGAACAGACTTATTGATTCTCTTTAGGTGGAGCCTTTCTTTTGCTTATGGAGTATGTTGATGGCTAAGTGCTTTCTTGACTAATTGCGTTGTTCGAATGGTTATCAAACGGGACTTAAGCTATTATATCTTTGCTTGCTTTGTTACGATC TCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCGTATCTGCACGAGCCTGAATCCCGAGAGGGTTTCGGACCTAAATTTTCGCCCACGATTTCCATTTTTTCTTTGATTTGATTTTCTATATTTGGCTGTTCCGAACGATTTCGCTTTGTCTTTGATCTCCCGGAATGGTAGACGCTCATACGCCGTCGTCCATGTCGCCGCCGGTTGCAGATCGAGAATCACCCATGTCGGTCTCTGCTAGCGACTTGACTCGTTTGAACTCCGAATCCTACTCTTCTTCCAATACCGTTGATGCGTCCGAGGGGGATTTGCCTTTGATGCCTTCTCATCATTGTTTTCAACTGGATGCGGTGCAAACACATTGGACAGAAGAGAAACACAGATTATTTCTTGATTCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCGATATAGGCATCTTCGTGCTTTGTCCTCGAAACAGAAAATGCGTCGGAAGCCGATCATGCCTAATATATCTTCTTCAGAGTCGATGGTCCTTCAGGATGCCTCCTGGCAGAAGGCTAACGTTGGGAGAACTGATCCTTTATTGGATAAGACTGCCGATTCTCCCGCTATTTTAGAGGATGTATGGATAAATCATTTCCCTTCTGCAGGAAATCAGTGTACTCTGGAAACTACTGATGTTCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGTCACATAAGAAACAAGACAAACTCCCGTCAATCTGCCAGAAGTTCTCAGCAGATTCCTCCATGCTGTCGTGATTCTCATACAATCGTTACAGAAGTTTCAGATCAAAACTTTGTGGATACTCATCCAGGAGAGTTGTCTGATGGCACGCCCATTACAAAACGATTAAAGAAAGCTTCCTCTGATTCTTCAGGCAACAACCGGGTAAAACTCGGGATTGCCATTGATTTCTCTTTGGAGAACCAATAATTGCATTTTACAAATGATCCAAGACCGAATATGCTGCTATTTCATCTCTTAGGTTGCACCATATAAAAGATTATCATCAGAAAGATAAAAGCCAGATGCAAAAACTTTGTGCCTCCAAATTCAGATTTGTGTTACAGTGCAAGAGGGAGCTGACAACAACTCATTCCAACATGTGAAGACACCCGGCTGTTCAAGTTCGTTATCCGAACGCAACACGATTCTGTTTTCCTTCCGAAAGAGCATCGAAAAGTAAATAAGGGAAGTGACAACAATAATTCTACCAGAAGATCTACGGCTGGAAGGAGAAAATACGTTTGTTTATGGTACAAACTAAACTTTTTCTTAGTTCATCAAATATAGAGTGAAAATATATGTTAACCCTTTCATTTCTCCTGCTTTTTTTCTTCTTAGAGTTTGAAGAAATGGAAATTCCAATAGATTTAGGGTATGAATATACATGATATAGAGAAAGCTAGACACCGACCCTGATACTGATATAGATATACACACCCTTTTACATCTGTTTTGAAATACTCTCATTTTGAAGTTCAGGTAGAGACCTCAAATGTAAATTACTATTACATAAAACAATAGATTTGAACAGACTTATTGATTCTCTTTAGGTGGAGCCTTTCTTTTGCTTATGGAGTATGTTGATGGCTAAGTGCTTTCTTGACTAATTGCGTTGTTCGAATGGTTATCAAACGGGACTTAAGCTATTATATCTTTGCTTGCTTTGTTACGATC ATGGTAGACGCTCATACGCCGTCGTCCATGTCGCCGCCGGTTGCAGATCGAGAATCACCCATGTCGGTCTCTGCTAGCGACTTGACTCGTTTGAACTCCGAATCCTACTCTTCTTCCAATACCGTTGATGCGTCCGAGGGGGATTTGCCTTTGATGCCTTCTCATCATTGTTTTCAACTGGATGCGGTGCAAACACATTGGACAGAAGAGAAACACAGATTATTTCTTGATTCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCGATATAGGCATCTTCGTGCTTTGTCCTCGAAACAGAAAATGCGTCGGAAGCCGATCATGCCTAATATATCTTCTTCAGAGTCGATGGTCCTTCAGGATGCCTCCTGGCAGAAGGCTAACGTTGGGAGAACTGATCCTTTATTGGATAAGACTGCCGATTCTCCCGCTATTTTAGAGGATGTATGGATAAATCATTTCCCTTCTGCAGGAAATCAGTGTACTCTGGAAACTACTGATGTTCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGTCACATAAGAAACAAGACAAACTCCCGTCAATCTGCCAGAAGTTCTCAGCAGATTCCTCCATGCTGTCGTGATTCTCATACAATCGTTACAGAAGTTTCAGATCAAAACTTTGTGGATACTCATCCAGGAGAGTTGTCTGATGGCACGCCCATTACAAAACGATTAAAGAAAGCTTCCTCTGATTCTTCAGGCAACAACCGGGTAAAACTCGGGATTGCCATTGATTTCTCTTTGGAGAACCAATAA
BLAST of CmoCh19G006190 vs. TrEMBL
Match: A0A0A0K7Z2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G073620 PE=4 SV=1) HSP 1 Score: 340.9 bits (873), Expect = 1.4e-90 Identity = 177/249 (71.08%), Postives = 205/249 (82.33%), Query Frame = 1
BLAST of CmoCh19G006190 vs. TrEMBL
Match: W9SMJ9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_027523 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 1.2e-22 Identity = 89/244 (36.48%), Postives = 124/244 (50.82%), Query Frame = 1
BLAST of CmoCh19G006190 vs. TrEMBL
Match: B9RYH7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0813320 PE=4 SV=1) HSP 1 Score: 106.7 bits (265), Expect = 4.4e-20 Identity = 80/192 (41.67%), Postives = 98/192 (51.04%), Query Frame = 1
BLAST of CmoCh19G006190 vs. TrEMBL
Match: A5AWZ9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001771 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 5.7e-20 Identity = 89/244 (36.48%), Postives = 116/244 (47.54%), Query Frame = 1
BLAST of CmoCh19G006190 vs. TrEMBL
Match: A0A0D2R7Q9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G024800 PE=4 SV=1) HSP 1 Score: 100.9 bits (250), Expect = 2.4e-18 Identity = 79/229 (34.50%), Postives = 111/229 (48.47%), Query Frame = 1
BLAST of CmoCh19G006190 vs. TAIR10
Match: AT5G42900.1 (AT5G42900.1 cold regulated gene 27) HSP 1 Score: 61.2 bits (147), Expect = 1.1e-09 Identity = 65/203 (32.02%), Postives = 91/203 (44.83%), Query Frame = 1
BLAST of CmoCh19G006190 vs. NCBI nr
Match: gi|449438404|ref|XP_004136978.1| (PREDICTED: uncharacterized protein LOC101204925 isoform X1 [Cucumis sativus]) HSP 1 Score: 340.9 bits (873), Expect = 2.0e-90 Identity = 177/249 (71.08%), Postives = 205/249 (82.33%), Query Frame = 1
BLAST of CmoCh19G006190 vs. NCBI nr
Match: gi|659109923|ref|XP_008454952.1| (PREDICTED: uncharacterized protein LOC103495241 isoform X1 [Cucumis melo]) HSP 1 Score: 334.7 bits (857), Expect = 1.4e-88 Identity = 176/249 (70.68%), Postives = 201/249 (80.72%), Query Frame = 1
BLAST of CmoCh19G006190 vs. NCBI nr
Match: gi|778725103|ref|XP_011658902.1| (PREDICTED: uncharacterized protein LOC101204925 isoform X2 [Cucumis sativus]) HSP 1 Score: 241.5 bits (615), Expect = 1.6e-60 Identity = 142/249 (57.03%), Postives = 168/249 (67.47%), Query Frame = 1
BLAST of CmoCh19G006190 vs. NCBI nr
Match: gi|659109926|ref|XP_008454953.1| (PREDICTED: uncharacterized protein LOC103495241 isoform X2 [Cucumis melo]) HSP 1 Score: 235.3 bits (599), Expect = 1.2e-58 Identity = 141/249 (56.63%), Postives = 164/249 (65.86%), Query Frame = 1
BLAST of CmoCh19G006190 vs. NCBI nr
Match: gi|1009150236|ref|XP_015892911.1| (PREDICTED: uncharacterized protein LOC107427085 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 116.3 bits (290), Expect = 7.9e-23 Identity = 95/250 (38.00%), Postives = 126/250 (50.40%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |