Cp4.1LG04g03380 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG04g03380
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionProline-rich family protein
LocationCp4.1LG04 : 7262932 .. 7263408 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTATGTGGGTAAAGCTACAAAGATCTTCATCTTCATTGTCACCGTTTTGGTTGTTCTTGGCCTTGTTCTAGCCTTTGGAGTCTTCCGCCACAGCCTCCAAAAACCCCACAAGTGCCTCGGAGATTCCTGTTTTTCTCCTCCAACCGCCTTCCCCAACCCCAATTCCGTCCCTTCCGGCAGCGCCGCCTCCAATCAGCCGCAGAACCCACCAAAACCACCGGATTCCAATCCTAACCCACCACCCCAAAATCGATTTCCGGCTTCTCCGCCTCTACCTGACGTTGCTTCTCCACCTCCGCCTGCTACCATCCCAACTCCCTTACCACCACCGCCCCCGCAATCCCAATCTCCGCCTCCTCCAGAAACCGCAGCGGCGGCGCCGTTGACTCCGCCCAGTACAACATCGGTGAGTCCGGATCCAATGGATGCTCAGCTGCAATCCTCGATTCCTAAGACCACTAAGAAGTTCTGA

mRNA sequence

ATGTGTTATGTGGGTAAAGCTACAAAGATCTTCATCTTCATTGTCACCGTTTTGGTTGTTCTTGGCCTTGTTCTAGCCTTTGGAGTCTTCCGCCACAGCCTCCAAAAACCCCACAAGTGCCTCGGAGATTCCTGTTTTTCTCCTCCAACCGCCTTCCCCAACCCCAATTCCGTCCCTTCCGGCAGCGCCGCCTCCAATCAGCCGCAGAACCCACCAAAACCACCGGATTCCAATCCTAACCCACCACCCCAAAATCGATTTCCGGCTTCTCCGCCTCTACCTGACGTTGCTTCTCCACCTCCGCCTGCTACCATCCCAACTCCCTTACCACCACCGCCCCCGCAATCCCAATCTCCGCCTCCTCCAGAAACCGCAGCGGCGGCGCCGTTGACTCCGCCCAGTACAACATCGGTGAGTCCGGATCCAATGGATGCTCAGCTGCAATCCTCGATTCCTAAGACCACTAAGAAGTTCTGA

Coding sequence (CDS)

ATGTGTTATGTGGGTAAAGCTACAAAGATCTTCATCTTCATTGTCACCGTTTTGGTTGTTCTTGGCCTTGTTCTAGCCTTTGGAGTCTTCCGCCACAGCCTCCAAAAACCCCACAAGTGCCTCGGAGATTCCTGTTTTTCTCCTCCAACCGCCTTCCCCAACCCCAATTCCGTCCCTTCCGGCAGCGCCGCCTCCAATCAGCCGCAGAACCCACCAAAACCACCGGATTCCAATCCTAACCCACCACCCCAAAATCGATTTCCGGCTTCTCCGCCTCTACCTGACGTTGCTTCTCCACCTCCGCCTGCTACCATCCCAACTCCCTTACCACCACCGCCCCCGCAATCCCAATCTCCGCCTCCTCCAGAAACCGCAGCGGCGGCGCCGTTGACTCCGCCCAGTACAACATCGGTGAGTCCGGATCCAATGGATGCTCAGCTGCAATCCTCGATTCCTAAGACCACTAAGAAGTTCTGA

Protein sequence

MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDSCFSPPTAFPNPNSVPSGSAASNQPQNPPKPPDSNPNPPPQNRFPASPPLPDVASPPPPATIPTPLPPPPPQSQSPPPPETAAAAPLTPPSTTSVSPDPMDAQLQSSIPKTTKKF
BLAST of Cp4.1LG04g03380 vs. TrEMBL
Match: A0A0A0K5L2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G044870 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.2e-42
Identity = 124/193 (64.25%), Postives = 129/193 (66.84%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDSCFSPPTAFPNPNSVPS 60
           MCYVGKATKIFIFIVTVLVVLGLVL FG  RH LQK HKC G+SCFSPP  F NPNS   
Sbjct: 1   MCYVGKATKIFIFIVTVLVVLGLVLGFGFMRHGLQKSHKCSGNSCFSPPAVFSNPNSATP 60

Query: 61  GSA---ASNQPQNPPKPPDSNPNPPPQNRFPA----------SPPLPDV--ASPPPPATI 120
           G++   ASNQPQNPP P  SNPNPPPQN  PA          SPP PD   ASPPPP  I
Sbjct: 61  GASPISASNQPQNPPNPSYSNPNPPPQNSIPAFPPPSDATSASPPPPDATPASPPPPDVI 120

Query: 121 PT--------------------PLPPPPPQSQSPPPPETAAAAPLTPPSTTSVSPDPMDA 159
           PT                    PLPPPPP SQSP PPET AA+PLTPPSTT VSP PM A
Sbjct: 121 PTSPPPPDTIPISPPPPDTIQNPLPPPPPASQSPSPPETQAASPLTPPSTTLVSPGPMHA 180

BLAST of Cp4.1LG04g03380 vs. TrEMBL
Match: W9SD86_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018287 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 1.9e-18
Identity = 79/152 (51.97%), Postives = 92/152 (60.53%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDSCFSPPTAFPNPNSVPS 60
           MCYVGKATKIFIFIVTVLVVLGLVL FG+ RH LQK HKC GDSC SPP  FPNP+  P+
Sbjct: 1   MCYVGKATKIFIFIVTVLVVLGLVLGFGLLRHGLQKTHKCSGDSCQSPPLVFPNPDPTPN 60

Query: 61  GSAASNQPQNP------PKPPDSNPNPPPQNRFPASPPLPDVASPPPPATIPTPLPPPPP 120
            S + + P  P      P PP S  +PP  N  P  P       PPPP + PT  PP PP
Sbjct: 61  PSYSQSSPARPDPNSSQPSPPSSVLSPPNPNPTPPPPDSNPSPGPPPPNSNPTQPPPSPP 120

Query: 121 QSQSPPPPETAAAAP-LTPPSTTSVSPDPMDA 146
               P PP     AP  +PP++  ++P P+ A
Sbjct: 121 ---PPTPPLLVGPAPTYSPPNSVQLTPGPVHA 149

BLAST of Cp4.1LG04g03380 vs. TrEMBL
Match: A0A061E2P1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_007780 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.7e-17
Identity = 78/159 (49.06%), Postives = 93/159 (58.49%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDSCFSPPTAFPNPNSVPS 60
           MCYVGKATKIFIF+VTVLVVLGLVL FG+FRH LQK HKC GDSC SP   FP+P S   
Sbjct: 1   MCYVGKATKIFIFVVTVLVVLGLVLGFGLFRHGLQKSHKCSGDSCPSPTNVFPDPIS--- 60

Query: 61  GSAASNQPQNPPKPPDSNPNPPPQNRFPASPPLP--DVASPPPPATIPTPLPPP-----P 120
                  P  PP P  S+ NPPP       PP P  + +  PPP+++PTP PPP      
Sbjct: 61  ------SPNTPPGPVSSSSNPPPPTTGSNQPPSPTFNPSPNPPPSSVPTPNPPPSPPIGT 120

Query: 121 PQSQSPPPPETAAAAPLTPPSTTSVSPDPMDAQLQSSIP 153
           P + +PPPP T    P  PP     +P P  +    ++P
Sbjct: 121 PTTTTPPPPNT---NPNPPPQFPPPTPPPPVSSAVLAVP 147

BLAST of Cp4.1LG04g03380 vs. TrEMBL
Match: A0A067L5I2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00300 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 8.8e-16
Identity = 85/163 (52.15%), Postives = 98/163 (60.12%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDSCF-SPPTAFPNPNSV- 60
           MCYVGKATKIFIFIVTVLVVLGL L FG+ RH L+K H C GDSC  SPP  FPNPN   
Sbjct: 1   MCYVGKATKIFIFIVTVLVVLGLTLGFGLLRHGLKKAHHCSGDSCHSSPPFTFPNPNPSL 60

Query: 61  -PSGSAASNQPQ-NPPKPPDS---NPNPPPQN-RFPASPPLPDVASPPPP-ATIPTPLPP 120
            PS S+ +  P  NPP PPDS    P+PP      P++P  P  +SPPPP + +  P PP
Sbjct: 61  NPSPSSPNAVPAGNPPSPPDSGTNQPSPPDSGPNQPSNPSPPQFSSPPPPDSNLIIPPPP 120

Query: 121 PPPQS---QSPPPPETAAAAPLTPP------STTSVSPDPMDA 146
           P P+     SPPPP   A     PP      ST  V+P P+ A
Sbjct: 121 PAPEPILLLSPPPPVAPAITGAPPPSYNPPSSTELVTPGPVHA 163

BLAST of Cp4.1LG04g03380 vs. TrEMBL
Match: A0A067F194_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g038981mg PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.4e-15
Identity = 78/151 (51.66%), Postives = 91/151 (60.26%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDSCF--SPPTAFPNPNSV 60
           MCYVGKATKIFIFIVTVLVVLGLVL FG+ R S+QK H+C GDSC   SPP  +PNP   
Sbjct: 1   MCYVGKATKIFIFIVTVLVVLGLVLGFGLLRRSIQKSHECSGDSCHSPSPPMLYPNPIPN 60

Query: 61  PSGSAASNQPQNPPKPPDSNPNPP-PQNRFPASPPLPDVASPPPPATIPTPLPPPPPQSQ 120
           P+ S +SN    PP P   +  PP PQ+  P+S          PPA + +  PPPPP   
Sbjct: 61  PN-SPSSNTSPTPPSPGIGSTTPPGPQSPNPSS---------NPPAPLTSIAPPPPPMLT 120

Query: 121 SPPPPE------TAAAAPLTPPSTTSVSPDP 143
           SPPPP       TAA  P +P +   VSP P
Sbjct: 121 SPPPPSQQQVITTAAPPPGSPSNLVLVSPGP 141

BLAST of Cp4.1LG04g03380 vs. TAIR10
Match: AT3G22070.1 (AT3G22070.1 proline-rich family protein)

HSP 1 Score: 71.6 bits (174), Expect = 4.8e-13
Identity = 80/182 (43.96%), Postives = 94/182 (51.65%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFR-HSLQKPHKCLGDSCFSPP---------- 60
           +CYVGKATKIFIFIVTV+ V+GLV+AFGV R HS    H C GD C S            
Sbjct: 2   LCYVGKATKIFIFIVTVVFVIGLVVAFGVLRRHS----HHCSGDYCSSSTDPSSSSSSSS 61

Query: 61  -------TAFPNPN------------SVPSGSAASNQPQNPPKPPDS--NPNPPPQNRFP 120
                  T FPNPN            S PS + +S+     P PP    NPNPPP    P
Sbjct: 62  SSTSPFITPFPNPNPNPNPNPPVLGSSPPSPTDSSSSTSISPNPPAPIVNPNPPP----P 121

Query: 121 ASPPLPDVASPPPPATIPTPLPPPPPQS---QSPPPPETAAAAPLTPPSTTSVSPDPMDA 148
           ++P  P   SPPPP    T  PPPP        PPP   +A+ PLTPPS+   SP P+ A
Sbjct: 122 STPNPPPEFSPPPPDLDTTTAPPPPSTDIPIPPPPPAPVSASPPLTPPSSVVTSPAPVHA 175

BLAST of Cp4.1LG04g03380 vs. NCBI nr
Match: gi|778730125|ref|XP_011659705.1| (PREDICTED: proline-rich receptor-like protein kinase PERK9 [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 6.0e-42
Identity = 124/193 (64.25%), Postives = 129/193 (66.84%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDSCFSPPTAFPNPNSVPS 60
           MCYVGKATKIFIFIVTVLVVLGLVL FG  RH LQK HKC G+SCFSPP  F NPNS   
Sbjct: 1   MCYVGKATKIFIFIVTVLVVLGLVLGFGFMRHGLQKSHKCSGNSCFSPPAVFSNPNSATP 60

Query: 61  GSA---ASNQPQNPPKPPDSNPNPPPQNRFPA----------SPPLPDV--ASPPPPATI 120
           G++   ASNQPQNPP P  SNPNPPPQN  PA          SPP PD   ASPPPP  I
Sbjct: 61  GASPISASNQPQNPPNPSYSNPNPPPQNSIPAFPPPSDATSASPPPPDATPASPPPPDVI 120

Query: 121 PT--------------------PLPPPPPQSQSPPPPETAAAAPLTPPSTTSVSPDPMDA 159
           PT                    PLPPPPP SQSP PPET AA+PLTPPSTT VSP PM A
Sbjct: 121 PTSPPPPDTIPISPPPPDTIQNPLPPPPPASQSPSPPETQAASPLTPPSTTLVSPGPMHA 180

BLAST of Cp4.1LG04g03380 vs. NCBI nr
Match: gi|659110760|ref|XP_008455396.1| (PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis melo])

HSP 1 Score: 172.9 bits (437), Expect = 4.3e-40
Identity = 122/193 (63.21%), Postives = 127/193 (65.80%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDSCFSPPTAFPNPNSVPS 60
           MCYVGKATKIFIFIVTVLVVLGLVL FG  RH LQK HKC G+SCFSPP  F NPNS   
Sbjct: 1   MCYVGKATKIFIFIVTVLVVLGLVLGFGFMRHGLQKSHKCSGNSCFSPPAVFSNPNSATP 60

Query: 61  GSA---ASNQPQNPPKPPDSNPNPPPQNRFPA----------SPPLPDV--ASPPPPATI 120
           G++   ASNQPQNPP P  SNPNPPPQN  PA          SPP PD   AS PPP  I
Sbjct: 61  GASPISASNQPQNPPNPSYSNPNPPPQNSIPAFPPPSDATPASPPPPDATPASQPPPDVI 120

Query: 121 PT--------------------PLPPPPPQSQSPPPPETAAAAPLTPPSTTSVSPDPMDA 159
           PT                    PLPPPPP SQS  PPET AA+PLTPPSTT VSP PM A
Sbjct: 121 PTSPPPPDTIPISPPPPDTIQNPLPPPPPASQSTSPPETQAASPLTPPSTTLVSPGPMHA 180

BLAST of Cp4.1LG04g03380 vs. NCBI nr
Match: gi|645248075|ref|XP_008230133.1| (PREDICTED: extensin [Prunus mume])

HSP 1 Score: 103.6 bits (257), Expect = 3.2e-19
Identity = 88/174 (50.57%), Postives = 100/174 (57.47%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGD-----SCFSPPTAFPNP 60
           MCYVGKATKIFIF+VTVLVVLGLVL FGV RH LQK HKC  D     S  SPP  FPNP
Sbjct: 1   MCYVGKATKIFIFVVTVLVVLGLVLGFGVLRHGLQKTHKCSADSDSCHSLSSPPLIFPNP 60

Query: 61  NSVPSGSAASNQPQNP--------PKPPDSNPNPPPQNRFPASPPLPDVASPPPPAT-IP 120
           NS      +SNQP  P        P PP  N NPPP N     PP   ++SPPPPAT I 
Sbjct: 61  NS------SSNQPNPPSTDPTLTQPSPPTPNFNPPPPNPDSNQPPPTSISSPPPPATPIQ 120

Query: 121 TPLP-------PPPPQS--QSPPPPETAAAAPLTPPSTTSVSPDPMDAQLQSSI 152
           TP P       PPPP +  Q+PPPP+     P +PP   S +  P +   Q+ +
Sbjct: 121 TPPPPATPIQTPPPPATPIQTPPPPDPTLNPPSSPPPPASTAAPPFNPPRQAQV 168

BLAST of Cp4.1LG04g03380 vs. NCBI nr
Match: gi|703149236|ref|XP_010109552.1| (hypothetical protein L484_018287 [Morus notabilis])

HSP 1 Score: 100.5 bits (249), Expect = 2.7e-18
Identity = 79/152 (51.97%), Postives = 92/152 (60.53%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDSCFSPPTAFPNPNSVPS 60
           MCYVGKATKIFIFIVTVLVVLGLVL FG+ RH LQK HKC GDSC SPP  FPNP+  P+
Sbjct: 1   MCYVGKATKIFIFIVTVLVVLGLVLGFGLLRHGLQKTHKCSGDSCQSPPLVFPNPDPTPN 60

Query: 61  GSAASNQPQNP------PKPPDSNPNPPPQNRFPASPPLPDVASPPPPATIPTPLPPPPP 120
            S + + P  P      P PP S  +PP  N  P  P       PPPP + PT  PP PP
Sbjct: 61  PSYSQSSPARPDPNSSQPSPPSSVLSPPNPNPTPPPPDSNPSPGPPPPNSNPTQPPPSPP 120

Query: 121 QSQSPPPPETAAAAP-LTPPSTTSVSPDPMDA 146
               P PP     AP  +PP++  ++P P+ A
Sbjct: 121 ---PPTPPLLVGPAPTYSPPNSVQLTPGPVHA 149

BLAST of Cp4.1LG04g03380 vs. NCBI nr
Match: gi|694429486|ref|XP_009342268.1| (PREDICTED: extensin [Pyrus x bretschneideri])

HSP 1 Score: 99.4 bits (246), Expect = 6.1e-18
Identity = 86/165 (52.12%), Postives = 94/165 (56.97%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDS-----CFSPPTAFPNP 60
           MCYVGKATKIFIF+VTVLVVLGLVL FGV RH LQK HKC  DS       SPP   PNP
Sbjct: 1   MCYVGKATKIFIFVVTVLVVLGLVLGFGVLRHGLQKSHKCSADSDSCRPLSSPPIQLPNP 60

Query: 61  N------SVPSGSAASNQPQ------NPPKP--PDSNPNPPPQNRFPASP-PLPDVASPP 120
           N      S P+      QP       NPP P  PD  P+PP     P  P P   + SPP
Sbjct: 61  NSGSNQPSPPNSDPTLTQPSPPNPNFNPPPPPNPDLTPSPPTSISTPPPPTPPTSILSPP 120

Query: 121 PPATIPTPLPPPP---PQSQSPPPPETAAAAPLTPPSTTSVSPDP 143
           PP +I +P PP P   P S  PPPP T AA P +PPS   V+P P
Sbjct: 121 PPTSILSPPPPNPTSNPPSFPPPPPATTAAPPFSPPSEAQVTPSP 165

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K5L2_CUCSA4.2e-4264.25Uncharacterized protein OS=Cucumis sativus GN=Csa_7G044870 PE=4 SV=1[more]
W9SD86_9ROSA1.9e-1851.97Uncharacterized protein OS=Morus notabilis GN=L484_018287 PE=4 SV=1[more]
A0A061E2P1_THECC4.7e-1749.06Uncharacterized protein OS=Theobroma cacao GN=TCM_007780 PE=4 SV=1[more]
A0A067L5I2_JATCU8.8e-1652.15Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00300 PE=4 SV=1[more]
A0A067F194_CITSI3.4e-1551.66Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g038981mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G22070.14.8e-1343.96 proline-rich family protein[more]
Match NameE-valueIdentityDescription
gi|778730125|ref|XP_011659705.1|6.0e-4264.25PREDICTED: proline-rich receptor-like protein kinase PERK9 [Cucumis sativus][more]
gi|659110760|ref|XP_008455396.1|4.3e-4063.21PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis melo][more]
gi|645248075|ref|XP_008230133.1|3.2e-1950.57PREDICTED: extensin [Prunus mume][more]
gi|703149236|ref|XP_010109552.1|2.7e-1851.97hypothetical protein L484_018287 [Morus notabilis][more]
gi|694429486|ref|XP_009342268.1|6.1e-1852.12PREDICTED: extensin [Pyrus x bretschneideri][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g03380.1Cp4.1LG04g03380.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 47..59
score: 4.5E-12coord: 101..122
score: 4.5E-12coord: 89..101
score: 4.5E-12coord: 67..83
score: 4.5
NoneNo IPR availablePANTHERPTHR36036FAMILY NOT NAMEDcoord: 1..154
score: 2.8
NoneNo IPR availablePANTHERPTHR36036:SF1GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MZN24coord: 1..154
score: 2.8

The following gene(s) are paralogous to this gene:

None