Cp4.1LG04g03380.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTTATGTGGGTAAAGCTACAAAGATCTTCATCTTCATTGTCACCGTTTTGGTTGTTCTTGGCCTTGTTCTAGCCTTTGGAGTCTTCCGCCACAGCCTCCAAAAACCCCACAAGTGCCTCGGAGATTCCTGTTTTTCTCCTCCAACCGCCTTCCCCAACCCCAATTCCGTCCCTTCCGGCAGCGCCGCCTCCAATCAGCCGCAGAACCCACCAAAACCACCGGATTCCAATCCTAACCCACCACCCCAAAATCGATTTCCGGCTTCTCCGCCTCTACCTGACGTTGCTTCTCCACCTCCGCCTGCTACCATCCCAACTCCCTTACCACCACCGCCCCCGCAATCCCAATCTCCGCCTCCTCCAGAAACCGCAGCGGCGGCGCCGTTGACTCCGCCCAGTACAACATCGGTGAGTCCGGATCCAATGGATGCTCAGCTGCAATCCTCGATTCCTAAGACCACTAAGAAGTTCTGA ATGTGTTATGTGGGTAAAGCTACAAAGATCTTCATCTTCATTGTCACCGTTTTGGTTGTTCTTGGCCTTGTTCTAGCCTTTGGAGTCTTCCGCCACAGCCTCCAAAAACCCCACAAGTGCCTCGGAGATTCCTGTTTTTCTCCTCCAACCGCCTTCCCCAACCCCAATTCCGTCCCTTCCGGCAGCGCCGCCTCCAATCAGCCGCAGAACCCACCAAAACCACCGGATTCCAATCCTAACCCACCACCCCAAAATCGATTTCCGGCTTCTCCGCCTCTACCTGACGTTGCTTCTCCACCTCCGCCTGCTACCATCCCAACTCCCTTACCACCACCGCCCCCGCAATCCCAATCTCCGCCTCCTCCAGAAACCGCAGCGGCGGCGCCGTTGACTCCGCCCAGTACAACATCGGTGAGTCCGGATCCAATGGATGCTCAGCTGCAATCCTCGATTCCTAAGACCACTAAGAAGTTCTGA ATGTGTTATGTGGGTAAAGCTACAAAGATCTTCATCTTCATTGTCACCGTTTTGGTTGTTCTTGGCCTTGTTCTAGCCTTTGGAGTCTTCCGCCACAGCCTCCAAAAACCCCACAAGTGCCTCGGAGATTCCTGTTTTTCTCCTCCAACCGCCTTCCCCAACCCCAATTCCGTCCCTTCCGGCAGCGCCGCCTCCAATCAGCCGCAGAACCCACCAAAACCACCGGATTCCAATCCTAACCCACCACCCCAAAATCGATTTCCGGCTTCTCCGCCTCTACCTGACGTTGCTTCTCCACCTCCGCCTGCTACCATCCCAACTCCCTTACCACCACCGCCCCCGCAATCCCAATCTCCGCCTCCTCCAGAAACCGCAGCGGCGGCGCCGTTGACTCCGCCCAGTACAACATCGGTGAGTCCGGATCCAATGGATGCTCAGCTGCAATCCTCGATTCCTAAGACCACTAAGAAGTTCTGA MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDSCFSPPTAFPNPNSVPSGSAASNQPQNPPKPPDSNPNPPPQNRFPASPPLPDVASPPPPATIPTPLPPPPPQSQSPPPPETAAAAPLTPPSTTSVSPDPMDAQLQSSIPKTTKKF
BLAST of Cp4.1LG04g03380.1 vs. TrEMBL
Match: A0A0A0K5L2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G044870 PE=4 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 4.2e-42 Identity = 124/193 (64.25%), Postives = 129/193 (66.84%), Query Frame = 1
BLAST of Cp4.1LG04g03380.1 vs. TrEMBL
Match: W9SD86_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018287 PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.9e-18 Identity = 79/152 (51.97%), Postives = 92/152 (60.53%), Query Frame = 1
BLAST of Cp4.1LG04g03380.1 vs. TrEMBL
Match: A0A061E2P1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_007780 PE=4 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 4.7e-17 Identity = 78/159 (49.06%), Postives = 93/159 (58.49%), Query Frame = 1
BLAST of Cp4.1LG04g03380.1 vs. TrEMBL
Match: A0A067L5I2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00300 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 8.8e-16 Identity = 85/163 (52.15%), Postives = 98/163 (60.12%), Query Frame = 1
BLAST of Cp4.1LG04g03380.1 vs. TrEMBL
Match: A0A067F194_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g038981mg PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 3.4e-15 Identity = 78/151 (51.66%), Postives = 91/151 (60.26%), Query Frame = 1
BLAST of Cp4.1LG04g03380.1 vs. TAIR10
Match: AT3G22070.1 (AT3G22070.1 proline-rich family protein) HSP 1 Score: 71.6 bits (174), Expect = 4.8e-13 Identity = 80/182 (43.96%), Postives = 94/182 (51.65%), Query Frame = 1
BLAST of Cp4.1LG04g03380.1 vs. NCBI nr
Match: gi|778730125|ref|XP_011659705.1| (PREDICTED: proline-rich receptor-like protein kinase PERK9 [Cucumis sativus]) HSP 1 Score: 179.1 bits (453), Expect = 6.0e-42 Identity = 124/193 (64.25%), Postives = 129/193 (66.84%), Query Frame = 1
BLAST of Cp4.1LG04g03380.1 vs. NCBI nr
Match: gi|659110760|ref|XP_008455396.1| (PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis melo]) HSP 1 Score: 172.9 bits (437), Expect = 4.3e-40 Identity = 122/193 (63.21%), Postives = 127/193 (65.80%), Query Frame = 1
BLAST of Cp4.1LG04g03380.1 vs. NCBI nr
Match: gi|645248075|ref|XP_008230133.1| (PREDICTED: extensin [Prunus mume]) HSP 1 Score: 103.6 bits (257), Expect = 3.2e-19 Identity = 88/174 (50.57%), Postives = 100/174 (57.47%), Query Frame = 1
BLAST of Cp4.1LG04g03380.1 vs. NCBI nr
Match: gi|703149236|ref|XP_010109552.1| (hypothetical protein L484_018287 [Morus notabilis]) HSP 1 Score: 100.5 bits (249), Expect = 2.7e-18 Identity = 79/152 (51.97%), Postives = 92/152 (60.53%), Query Frame = 1
BLAST of Cp4.1LG04g03380.1 vs. NCBI nr
Match: gi|694429486|ref|XP_009342268.1| (PREDICTED: extensin [Pyrus x bretschneideri]) HSP 1 Score: 99.4 bits (246), Expect = 6.1e-18 Identity = 86/165 (52.12%), Postives = 94/165 (56.97%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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