CmoCh11G019160 (gene) Cucurbita moschata (Rifu)

NameCmoCh11G019160
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionUnknown protein
LocationCmo_Chr11 : 13307939 .. 13308415 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTTATGTGGGTAAAGCTACAAAGATCTTCATCTTCATTGTCACCGTTTTGGTGGTTCTTGGCCTTGTTCTAGCCTTTGGAGTCTTCCGCCACAGCCTCCAAAAACCCCACAAGTGCCTCGGAGATTCCTGTTTTTCTCCTCCAACCGCCTTCCCCAACCCCAATTCCGTCCCTTCCGGCAGCGCCGCCTCCAATCAGCCGCAGAACCCACCAAAACCACCGGATTCCAATCCTAACCCACCACCCCAAAATCCATTTCCGGCTTCTCCGCCTCCGCCTGACGTTGCTTCTCCACCTCCGCCTGCTACCATCCCAACTCCCTTACCACCACCGCCCCCGCAATCCCAATCTCCGCCTCCTCCAGAAACCGCAGCGGCGGCGCCGTTAACTCCGCCCAGTCCAACATCTGTGAGTCCGGATCCAATGGATGCTCAGTTGCGATCCTCGATTCCTAAGACCACTAAGAAGTTCTGA

mRNA sequence

ATGTGTTATGTGGGTAAAGCTACAAAGATCTTCATCTTCATTGTCACCGTTTTGGTGGTTCTTGGCCTTGTTCTAGCCTTTGGAGTCTTCCGCCACAGCCTCCAAAAACCCCACAAGTGCCTCGGAGATTCCTGTTTTTCTCCTCCAACCGCCTTCCCCAACCCCAATTCCGTCCCTTCCGGCAGCGCCGCCTCCAATCAGCCGCAGAACCCACCAAAACCACCGGATTCCAATCCTAACCCACCACCCCAAAATCCATTTCCGGCTTCTCCGCCTCCGCCTGACGTTGCTTCTCCACCTCCGCCTGCTACCATCCCAACTCCCTTACCACCACCGCCCCCGCAATCCCAATCTCCGCCTCCTCCAGAAACCGCAGCGGCGGCGCCGTTAACTCCGCCCAGTCCAACATCTGTGAGTCCGGATCCAATGGATGCTCAGTTGCGATCCTCGATTCCTAAGACCACTAAGAAGTTCTGA

Coding sequence (CDS)

ATGTGTTATGTGGGTAAAGCTACAAAGATCTTCATCTTCATTGTCACCGTTTTGGTGGTTCTTGGCCTTGTTCTAGCCTTTGGAGTCTTCCGCCACAGCCTCCAAAAACCCCACAAGTGCCTCGGAGATTCCTGTTTTTCTCCTCCAACCGCCTTCCCCAACCCCAATTCCGTCCCTTCCGGCAGCGCCGCCTCCAATCAGCCGCAGAACCCACCAAAACCACCGGATTCCAATCCTAACCCACCACCCCAAAATCCATTTCCGGCTTCTCCGCCTCCGCCTGACGTTGCTTCTCCACCTCCGCCTGCTACCATCCCAACTCCCTTACCACCACCGCCCCCGCAATCCCAATCTCCGCCTCCTCCAGAAACCGCAGCGGCGGCGCCGTTAACTCCGCCCAGTCCAACATCTGTGAGTCCGGATCCAATGGATGCTCAGTTGCGATCCTCGATTCCTAAGACCACTAAGAAGTTCTGA
BLAST of CmoCh11G019160 vs. TrEMBL
Match: A0A0A0K5L2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G044870 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 8.8e-40
Identity = 123/193 (63.73%), Postives = 129/193 (66.84%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDSCFSPPTAFPNPNSVPS 60
           MCYVGKATKIFIFIVTVLVVLGLVL FG  RH LQK HKC G+SCFSPP  F NPNS   
Sbjct: 1   MCYVGKATKIFIFIVTVLVVLGLVLGFGFMRHGLQKSHKCSGNSCFSPPAVFSNPNSATP 60

Query: 61  GSA---ASNQPQNPPKPPDSNPNPPPQNPFPA----------SPPPPDV--ASPPPPATI 120
           G++   ASNQPQNPP P  SNPNPPPQN  PA          SPPPPD   ASPPPP  I
Sbjct: 61  GASPISASNQPQNPPNPSYSNPNPPPQNSIPAFPPPSDATSASPPPPDATPASPPPPDVI 120

Query: 121 PT--------------------PLPPPPPQSQSPPPPETAAAAPLTPPSPTSVSPDPMDA 159
           PT                    PLPPPPP SQSP PPET AA+PLTPPS T VSP PM A
Sbjct: 121 PTSPPPPDTIPISPPPPDTIQNPLPPPPPASQSPSPPETQAASPLTPPSTTLVSPGPMHA 180

BLAST of CmoCh11G019160 vs. TrEMBL
Match: W9SD86_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018287 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.6e-17
Identity = 84/154 (54.55%), Postives = 97/154 (62.99%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDSCFSPPTAFPNPNSVPS 60
           MCYVGKATKIFIFIVTVLVVLGLVL FG+ RH LQK HKC GDSC SPP  FPNP+  P+
Sbjct: 1   MCYVGKATKIFIFIVTVLVVLGLVLGFGLLRHGLQKTHKCSGDSCQSPPLVFPNPDPTPN 60

Query: 61  GSAASNQPQNPPKPPDSNPNPP-----PQNPFPASPPPPD---VASPPPPATIPTPLPPP 120
            S + + P   P P  S P+PP     P NP P +PPPPD      PPPP + PT  PP 
Sbjct: 61  PSYSQSSPAR-PDPNSSQPSPPSSVLSPPNPNP-TPPPPDSNPSPGPPPPNSNPTQPPPS 120

Query: 121 PPQSQSPPPPETAAAAP-LTPPSPTSVSPDPMDA 146
           PP    P PP     AP  +PP+   ++P P+ A
Sbjct: 121 PP---PPTPPLLVGPAPTYSPPNSVQLTPGPVHA 149

BLAST of CmoCh11G019160 vs. TrEMBL
Match: A0A061E2P1_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_007780 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 5.2e-16
Identity = 84/164 (51.22%), Postives = 101/164 (61.59%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDSCFSPPTAFPNPNSVPS 60
           MCYVGKATKIFIF+VTVLVVLGLVL FG+FRH LQK HKC GDSC SP   FP+P S P+
Sbjct: 1   MCYVGKATKIFIFVVTVLVVLGLVLGFGLFRHGLQKSHKCSGDSCPSPTNVFPDPISSPN 60

Query: 61  G-----SAASNQP------QNPPKPP-DSNPNPPPQNPFPASPPP------PDVASPPPP 120
                 S++SN P        PP P  + +PNPPP +    +PPP      P   +PPPP
Sbjct: 61  TPPGPVSSSSNPPPPTTGSNQPPSPTFNPSPNPPPSSVPTPNPPPSPPIGTPTTTTPPPP 120

Query: 121 ATIPTPLPPPPPQSQSPPPPETAAAAPLTP---PSPTSVSPDPM 144
            T P P P  PP   +PPPP ++A   + P   PSP  V+P P+
Sbjct: 121 NTNPNPPPQFPP--PTPPPPVSSAVLAVPPYNQPSPVLVAPGPV 162

BLAST of CmoCh11G019160 vs. TrEMBL
Match: A0A067L5I2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00300 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.6e-15
Identity = 88/163 (53.99%), Postives = 102/163 (62.58%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDSCF-SPPTAFPNPNSV- 60
           MCYVGKATKIFIFIVTVLVVLGL L FG+ RH L+K H C GDSC  SPP  FPNPN   
Sbjct: 1   MCYVGKATKIFIFIVTVLVVLGLTLGFGLLRHGLKKAHHCSGDSCHSSPPFTFPNPNPSL 60

Query: 61  -PSGSAASNQPQ-NPPKPPDS---NPNPPPQNP-FPASPPPPDVASPPPP-ATIPTPLPP 120
            PS S+ +  P  NPP PPDS    P+PP   P  P++P PP  +SPPPP + +  P PP
Sbjct: 61  NPSPSSPNAVPAGNPPSPPDSGTNQPSPPDSGPNQPSNPSPPQFSSPPPPDSNLIIPPPP 120

Query: 121 PPPQS---QSPPPPETAAAAPLTPPS---PTS---VSPDPMDA 146
           P P+     SPPPP   A     PPS   P+S   V+P P+ A
Sbjct: 121 PAPEPILLLSPPPPVAPAITGAPPPSYNPPSSTELVTPGPVHA 163

BLAST of CmoCh11G019160 vs. TrEMBL
Match: F6HIM1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g02660 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.8e-14
Identity = 72/146 (49.32%), Postives = 90/146 (61.64%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDSCFSPPTA-FPNPNSVP 60
           MCYVGKATKIFIFIVTVL V GLV+ FG+ RHS+QK HKC GDSC  PP++ +P+P++ P
Sbjct: 1   MCYVGKATKIFIFIVTVLAVTGLVIGFGLLRHSIQKTHKCSGDSCLQPPSSIYPDPSATP 60

Query: 61  SGSAASNQPQNPPKPPDSNPNPPPQNPFPASPPPPDVASPPPPATIPTPLPPPPPQSQSP 120
           +     N    P   P+ NPNP P NP P   P P++  PPPP  +    PPPP Q+   
Sbjct: 61  TPFLTPNPNPTPIPNPNPNPNPSP-NPNPNPSPNPNLNPPPPPPPLSPTTPPPPAQT--- 120

Query: 121 PPPETAAAAPLTPPSPTSVSPDPMDA 146
               T A AP+  P P   +P P +A
Sbjct: 121 ----TLATAPIYSP-PALPTPGPANA 137

BLAST of CmoCh11G019160 vs. TAIR10
Match: AT3G22070.1 (AT3G22070.1 proline-rich family protein)

HSP 1 Score: 70.1 bits (170), Expect = 1.4e-12
Identity = 84/190 (44.21%), Postives = 96/190 (50.53%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFR-HSLQKPHKCLGDSCFSPP---------- 60
           +CYVGKATKIFIFIVTV+ V+GLV+AFGV R HS    H C GD C S            
Sbjct: 2   LCYVGKATKIFIFIVTVVFVIGLVVAFGVLRRHS----HHCSGDYCSSSTDPSSSSSSSS 61

Query: 61  -------TAFPNPNSVP----------------SGSAASNQPQ------NPPKPPDSNPN 120
                  T FPNPN  P                S S+ S  P       NP  PP S PN
Sbjct: 62  SSTSPFITPFPNPNPNPNPNPPVLGSSPPSPTDSSSSTSISPNPPAPIVNPNPPPPSTPN 121

Query: 121 PPPQNPFPASPPPPDV---ASPPPPATIPTPLPPPPPQSQSPPPPETAAAAPLTPPSPTS 148
           PPP+     SPPPPD+    +PPPP+T   P+PPPPP   S  P       PLTPPS   
Sbjct: 122 PPPE----FSPPPPDLDTTTAPPPPST-DIPIPPPPPAPVSASP-------PLTPPSSVV 175

BLAST of CmoCh11G019160 vs. NCBI nr
Match: gi|778730125|ref|XP_011659705.1| (PREDICTED: proline-rich receptor-like protein kinase PERK9 [Cucumis sativus])

HSP 1 Score: 171.4 bits (433), Expect = 1.3e-39
Identity = 123/193 (63.73%), Postives = 129/193 (66.84%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDSCFSPPTAFPNPNSVPS 60
           MCYVGKATKIFIFIVTVLVVLGLVL FG  RH LQK HKC G+SCFSPP  F NPNS   
Sbjct: 1   MCYVGKATKIFIFIVTVLVVLGLVLGFGFMRHGLQKSHKCSGNSCFSPPAVFSNPNSATP 60

Query: 61  GSA---ASNQPQNPPKPPDSNPNPPPQNPFPA----------SPPPPDV--ASPPPPATI 120
           G++   ASNQPQNPP P  SNPNPPPQN  PA          SPPPPD   ASPPPP  I
Sbjct: 61  GASPISASNQPQNPPNPSYSNPNPPPQNSIPAFPPPSDATSASPPPPDATPASPPPPDVI 120

Query: 121 PT--------------------PLPPPPPQSQSPPPPETAAAAPLTPPSPTSVSPDPMDA 159
           PT                    PLPPPPP SQSP PPET AA+PLTPPS T VSP PM A
Sbjct: 121 PTSPPPPDTIPISPPPPDTIQNPLPPPPPASQSPSPPETQAASPLTPPSTTLVSPGPMHA 180

BLAST of CmoCh11G019160 vs. NCBI nr
Match: gi|659110760|ref|XP_008455396.1| (PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis melo])

HSP 1 Score: 165.2 bits (417), Expect = 9.0e-38
Identity = 121/193 (62.69%), Postives = 127/193 (65.80%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDSCFSPPTAFPNPNSVPS 60
           MCYVGKATKIFIFIVTVLVVLGLVL FG  RH LQK HKC G+SCFSPP  F NPNS   
Sbjct: 1   MCYVGKATKIFIFIVTVLVVLGLVLGFGFMRHGLQKSHKCSGNSCFSPPAVFSNPNSATP 60

Query: 61  GSA---ASNQPQNPPKPPDSNPNPPPQNPFPA----------SPPPPDV--ASPPPPATI 120
           G++   ASNQPQNPP P  SNPNPPPQN  PA          SPPPPD   AS PPP  I
Sbjct: 61  GASPISASNQPQNPPNPSYSNPNPPPQNSIPAFPPPSDATPASPPPPDATPASQPPPDVI 120

Query: 121 PT--------------------PLPPPPPQSQSPPPPETAAAAPLTPPSPTSVSPDPMDA 159
           PT                    PLPPPPP SQS  PPET AA+PLTPPS T VSP PM A
Sbjct: 121 PTSPPPPDTIPISPPPPDTIQNPLPPPPPASQSTSPPETQAASPLTPPSTTLVSPGPMHA 180

BLAST of CmoCh11G019160 vs. NCBI nr
Match: gi|645248075|ref|XP_008230133.1| (PREDICTED: extensin [Prunus mume])

HSP 1 Score: 105.1 bits (261), Expect = 1.1e-19
Identity = 90/174 (51.72%), Postives = 103/174 (59.20%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGD-----SCFSPPTAFPNP 60
           MCYVGKATKIFIF+VTVLVVLGLVL FGV RH LQK HKC  D     S  SPP  FPNP
Sbjct: 1   MCYVGKATKIFIFVVTVLVVLGLVLGFGVLRHGLQKTHKCSADSDSCHSLSSPPLIFPNP 60

Query: 61  NSVPSGSAASNQPQNP--------PKPPDSNPNPPPQNPFPASPPPPDVASPPPPAT-IP 120
           NS      +SNQP  P        P PP  N NPPP NP    PPP  ++SPPPPAT I 
Sbjct: 61  NS------SSNQPNPPSTDPTLTQPSPPTPNFNPPPPNPDSNQPPPTSISSPPPPATPIQ 120

Query: 121 TPLP-------PPPPQS--QSPPPPETAAAAPLTPPSPTSVSPDPMDAQLRSSI 152
           TP P       PPPP +  Q+PPPP+     P +PP P S +  P +   ++ +
Sbjct: 121 TPPPPATPIQTPPPPATPIQTPPPPDPTLNPPSSPPPPASTAAPPFNPPRQAQV 168

BLAST of CmoCh11G019160 vs. NCBI nr
Match: gi|1009128123|ref|XP_015881059.1| (PREDICTED: sulfated surface glycoprotein 185 [Ziziphus jujuba])

HSP 1 Score: 99.8 bits (247), Expect = 4.7e-18
Identity = 86/158 (54.43%), Postives = 96/158 (60.76%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDSCFSP-PTAFPNP--NS 60
           MCYVGKATKIFIFIVTVLVV GLVL FG+ RH L K H C GDSC SP P  FP P  N 
Sbjct: 1   MCYVGKATKIFIFIVTVLVVFGLVLGFGLLRHGLHKSHNCSGDSCHSPSPVVFPQPTNNP 60

Query: 61  VPSGSAASNQPQNP------PKPPDSNPNPPPQNPFPASPPPPDVASPPPPATIPTPLPP 120
            PS S ++  P +P      P PP S  NPP  NP P  PPPP   SP  P + P+P PP
Sbjct: 61  NPSSSQSTTSPPSPVTGTSQPSPPSSALNPP--NPDPTPPPPPPPPSPSLPTSDPSPPPP 120

Query: 121 ---PPPQSQSPPPPETAAAAP-LTPPSPTSVSPDPMDA 146
              P P   +PPPP T  AAP  +PPSP   +P P+ A
Sbjct: 121 DSNPTPPPAAPPPPATTVAAPTYSPPSPLQETPGPVHA 156

BLAST of CmoCh11G019160 vs. NCBI nr
Match: gi|694429486|ref|XP_009342268.1| (PREDICTED: extensin [Pyrus x bretschneideri])

HSP 1 Score: 97.4 bits (241), Expect = 2.3e-17
Identity = 90/171 (52.63%), Postives = 99/171 (57.89%), Query Frame = 1

Query: 1   MCYVGKATKIFIFIVTVLVVLGLVLAFGVFRHSLQKPHKCLGDS-----CFSPPTAFPNP 60
           MCYVGKATKIFIF+VTVLVVLGLVL FGV RH LQK HKC  DS       SPP   PNP
Sbjct: 1   MCYVGKATKIFIFVVTVLVVLGLVLGFGVLRHGLQKSHKCSADSDSCRPLSSPPIQLPNP 60

Query: 61  NSVPSGSAASNQPQNP--------PKPPDSNPNPPPQ-----NPFP----ASPPPP---- 120
           NS       SNQP  P        P PP+ N NPPP       P P    ++PPPP    
Sbjct: 61  NS------GSNQPSPPNSDPTLTQPSPPNPNFNPPPPPNPDLTPSPPTSISTPPPPTPPT 120

Query: 121 DVASPPPPATIPTPLPPPP---PQSQSPPPPETAAAAPLTPPSPTSVSPDP 143
            + SPPPP +I +P PP P   P S  PPPP T AA P +PPS   V+P P
Sbjct: 121 SILSPPPPTSILSPPPPNPTSNPPSFPPPPPATTAAPPFSPPSEAQVTPSP 165

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K5L2_CUCSA8.8e-4063.73Uncharacterized protein OS=Cucumis sativus GN=Csa_7G044870 PE=4 SV=1[more]
W9SD86_9ROSA1.6e-1754.55Uncharacterized protein OS=Morus notabilis GN=L484_018287 PE=4 SV=1[more]
A0A061E2P1_THECC5.2e-1651.22Uncharacterized protein OS=Theobroma cacao GN=TCM_007780 PE=4 SV=1[more]
A0A067L5I2_JATCU2.6e-1553.99Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00300 PE=4 SV=1[more]
F6HIM1_VITVI2.8e-1449.32Putative uncharacterized protein OS=Vitis vinifera GN=VIT_12s0059g02660 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT3G22070.11.4e-1244.21 proline-rich family protein[more]
Match NameE-valueIdentityDescription
gi|778730125|ref|XP_011659705.1|1.3e-3963.73PREDICTED: proline-rich receptor-like protein kinase PERK9 [Cucumis sativus][more]
gi|659110760|ref|XP_008455396.1|9.0e-3862.69PREDICTED: proline-rich receptor-like protein kinase PERK10 [Cucumis melo][more]
gi|645248075|ref|XP_008230133.1|1.1e-1951.72PREDICTED: extensin [Prunus mume][more]
gi|1009128123|ref|XP_015881059.1|4.7e-1854.43PREDICTED: sulfated surface glycoprotein 185 [Ziziphus jujuba][more]
gi|694429486|ref|XP_009342268.1|2.3e-1752.63PREDICTED: extensin [Pyrus x bretschneideri][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh11G019160.1CmoCh11G019160.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 47..59
score: 4.5E-12coord: 101..122
score: 4.5E-12coord: 89..101
score: 4.5E-12coord: 67..83
score: 4.5
NoneNo IPR availablePANTHERPTHR36036FAMILY NOT NAMEDcoord: 1..154
score: 8.8
NoneNo IPR availablePANTHERPTHR36036:SF1GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MZN24coord: 1..154
score: 8.8

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh11G019160CmoCh19G009650Cucurbita moschata (Rifu)cmocmoB108