Cp4.1LG04g03280 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG04g03280
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionMYB-related transcription factor
LocationCp4.1LG04 : 7314747 .. 7316429 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGACGAGCTCCATGCTGTGATAAGAATGGCCTGAAAAAGGGTCCATGGACTCCTGAGGAAGATCAGAAGCTTGTTGGCTATATTCAAATTCATGGGCCTGGGAATTGGCGTAATCTTCCTAAAAAAGCTGGTGTGTTCTTGTTTGTTCTTGTGTGTTCTTGTTTGTTCTTGTGTGTTCTTGTTTGTTCTTGTTTGTGTGTTGAAATTTAAGAGCTGAAATGAAAAGTTGAGGCCTTTTTGTTGGGATGTTTCGTAGGACTTCAAAGATGTGGGAAAAGTTGTAGGCTTCGGTGGACTAATTATCTGAGACCTGATATCAAGAGAGGGAGGTTTTCTTTTGAGGAAGAAGAAACTATAATCCAATTGCATAGTGTCTTGGGAAACAAGTAAGATTAATCGTGTTTTTTTCTCTCTAAATTATGAACTCGGATGTAACAGCTCAGGTCTACCGCTAGCAAATATTGTCTTCTTTAAGGTTTTCTCTTATGGGTTTCCCTTCAAGATTTTAAAACGTGTCTATTAGTGAGAAGTTTTTACACCCTTGTAAAGAATGATTTGTTTTTTTCTCCAACTGATGTAAGATCTCACACTCGAAGGAGGATGGACACTAGGCAGTGTGCCAGCAAAAACACTGAGCCCCGAAGGAGGGTGGACACTAAGCGGTGTGCCACTGAGGACGCTGGGCCCCGAAAGAGTGTAGATTGTGAGATCCCACATCGATTGAAGAGGGGAATGAGTGTCAGCGAGGACGTTGGCCCCGAACGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGATGAACAAAACATTTTTTTATATGGGTGTGGAAACCTCTCCCTAGTAGACGTGTTTTAAAACCTTTAGGGTAAGTCCGAAAAGGGAAAGCCCAAAGAGGACAATATATGATAGTGGTGGGTTTGGGCTGTGTTACACAGGAAACTTGTATGATGCTCACAAATGGTTGATTTTTGTTGTTGTCTTAGATGGTCAGCGATAGCAGCTCATTTACCTGGAAGAACAGATAACGAGATCAAAAACTACTGGAATACTCACATTAGAAAAAAACTCCTTCGAATGGGAATCGACCCAGTGACCCACACTCCACGGATCGATCTTCTCGACCTATCCTCCATCATCGCCACGGCCATCCGCAGCCACCCAATCCTCGGTCTCTCGACGTTATTAAACAACCAAGCTCAAGCTCTAAACCCTGAATCTCTAAGGCTAATTTCCACCCTCTTAGCCCTCAAACAAGAAGACCCAAATGCCAACAATTCCCATCTCCAAAATGAAGAACATGCTCAAATTCAAGCTCAAATGGACACATTATCACAACTCTTACAACCCAACGATGAAATCAATAATAACACAAACTCTTCAATGATACCCATCACAAACTTCGTTGAGTGCTCAAATTCTCAAGAAAATATGAACTTTTTAGCTTCAAATTTGAGTGGAGATGATGTTAATCATGTGTACGATGATGGCTTGAAACCTAAGGCTTCAGATTTTGGGTTTGAATCGGTTATAACAACGCCAAAATCAAGCCCCACGCCGTTGAATTCTTCATCAACTTGCATAAACAATAGCTGCAATGAGGATGAGAGAGACAGTTTTTGTAGTAATTTTTTGCAGTTTGAAATTCCTCAAGGCTTGGACTTTGCTGATTTCATGTAA

mRNA sequence

ATGGGACGAGCTCCATGCTGTGATAAGAATGGCCTGAAAAAGGGTCCATGGACTCCTGAGGAAGATCAGAAGCTTGTTGGCTATATTCAAATTCATGGGCCTGGGAATTGGCGTAATCTTCCTAAAAAAGCTGGACTTCAAAGATGTGGGAAAAGTTGTAGGCTTCGGTGGACTAATTATCTGAGACCTGATATCAAGAGAGGGAGCCACCCAATCCTCGGTCTCTCGACGTTATTAAACAACCAAGCTCAAGCTCTAAACCCTGAATCTCTAAGGCTAATTTCCACCCTCTTAGCCCTCAAACAAGAAGACCCAAATGCCAACAATTCCCATCTCCAAAATGAAGAACATGCTCAAATTCAAGCTCAAATGGACACATTATCACAACTCTTACAACCCAACGATGAAATCAATAATAACACAAACTCTTCAATGATACCCATCACAAACTTCGTTGAGTGCTCAAATTCTCAAGAAAATATGAACTTTTTAGCTTCAAATTTGAGTGGAGATGATGTTAATCATGTGTACGATGATGGCTTGAAACCTAAGGCTTCAGATTTTGGGTTTGAATCGGTTATAACAACGCCAAAATCAAGCCCCACGCCGTTGAATTCTTCATCAACTTGCATAAACAATAGCTGCAATGAGGATGAGAGAGACAGTTTTTGTAGTAATTTTTTGCAGTTTGAAATTCCTCAAGGCTTGGACTTTGCTGATTTCATGTAA

Coding sequence (CDS)

ATGGGACGAGCTCCATGCTGTGATAAGAATGGCCTGAAAAAGGGTCCATGGACTCCTGAGGAAGATCAGAAGCTTGTTGGCTATATTCAAATTCATGGGCCTGGGAATTGGCGTAATCTTCCTAAAAAAGCTGGACTTCAAAGATGTGGGAAAAGTTGTAGGCTTCGGTGGACTAATTATCTGAGACCTGATATCAAGAGAGGGAGCCACCCAATCCTCGGTCTCTCGACGTTATTAAACAACCAAGCTCAAGCTCTAAACCCTGAATCTCTAAGGCTAATTTCCACCCTCTTAGCCCTCAAACAAGAAGACCCAAATGCCAACAATTCCCATCTCCAAAATGAAGAACATGCTCAAATTCAAGCTCAAATGGACACATTATCACAACTCTTACAACCCAACGATGAAATCAATAATAACACAAACTCTTCAATGATACCCATCACAAACTTCGTTGAGTGCTCAAATTCTCAAGAAAATATGAACTTTTTAGCTTCAAATTTGAGTGGAGATGATGTTAATCATGTGTACGATGATGGCTTGAAACCTAAGGCTTCAGATTTTGGGTTTGAATCGGTTATAACAACGCCAAAATCAAGCCCCACGCCGTTGAATTCTTCATCAACTTGCATAAACAATAGCTGCAATGAGGATGAGAGAGACAGTTTTTGTAGTAATTTTTTGCAGTTTGAAATTCCTCAAGGCTTGGACTTTGCTGATTTCATGTAA

Protein sequence

MGRAPCCDKNGLKKGPWTPEEDQKLVGYIQIHGPGNWRNLPKKAGLQRCGKSCRLRWTNYLRPDIKRGSHPILGLSTLLNNQAQALNPESLRLISTLLALKQEDPNANNSHLQNEEHAQIQAQMDTLSQLLQPNDEINNNTNSSMIPITNFVECSNSQENMNFLASNLSGDDVNHVYDDGLKPKASDFGFESVITTPKSSPTPLNSSSTCINNSCNEDERDSFCSNFLQFEIPQGLDFADFM
Homology
[Close]
BLAST of Cp4.1LG04g03280 vs. Swiss-Prot
Match: MYB4_ORYSJ (Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4 PE=2 SV=2)

HSP 1 Score: 132.9 bits (333), Expect = 4.8e-30
Identity = 69/135 (51.11%), Postives = 87/135 (64.44%), Query Frame = 1 

Query: 1   MGRAPCCDKNGLKKGPWTPEEDQKLVGYIQIHGPGNWRNLPKKAGLQRCGKSCRLRWTNY 60
           MGRAPCC+K GLKKGPWTPEED+ LV +IQ HG GNWR LPK+AGL RCGKSCRLRW NY
Sbjct: 1   MGRAPCCEKMGLKKGPWTPEEDKVLVAHIQRHGHGNWRALPKQAGLLRCGKSCRLRWINY 60

Query: 61  LRPDIKRGS------HPILGLSTLLNNQAQALNPESLRLISTLLALKQEDPNANNSHLQN 120
           LRPDIKRG+        I+ L  LL N+  A+   + RL           P   ++ ++N
Sbjct: 61  LRPDIKRGNFSKEEEDTIIHLHELLGNRWSAI---AARL-----------PGRTDNEIKN 120

Query: 121 EEHAQIQAQMDTLSQ 130
             H  ++ ++D  +Q
Sbjct: 121 VWHTHLKKRLDAPAQ 121

[Close]
BLAST of Cp4.1LG04g03280 vs. Swiss-Prot
Match: MYB06_ANTMA (Myb-related protein 306 OS=Antirrhinum majus GN=MYB306 PE=2 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.0e-28
Identity = 59/92 (64.13%), Postives = 64/92 (69.57%), Query Frame = 1 

Query: 1  MGRAPCCDKNGLKKGPWTPEEDQKLVGYIQIHGPGNWRNLPKKAGLQRCGKSCRLRWTNY 60
          MGR PCCDK G+KKGPWTPEED  LV YIQ HGPGNWR +P   GL RC KSCRLRWTNY
Sbjct: 1  MGRPPCCDKIGVKKGPWTPEEDIILVSYIQEHGPGNWRAIPSNTGLLRCSKSCRLRWTNY 60

Query: 61 LRPDIKRGSHP------ILGLSTLLNNQAQAL 87
          LRP IKRG         I+ L  LL N+  A+
Sbjct: 61 LRPGIKRGDFTEHEEKMIIHLQALLGNRWAAI 92

[Close]
BLAST of Cp4.1LG04g03280 vs. Swiss-Prot
Match: MYB34_ARATH (Transcription factor MYB34 OS=Arabidopsis thaliana GN=MYB34 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.7e-27
Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = 1 

Query: 1   MGRAPCCDKNGLKKGPWTPEEDQKLVGYIQIHGPGNWRNLPKKAGLQRCGKSCRLRWTNY 60
           M R PCC + G+KKG WTPEEDQKL+ Y+ +HG G WR LP+KAGL+RCGKSCRLRW NY
Sbjct: 1   MVRTPCCKEEGIKKGAWTPEEDQKLIAYLHLHGEGGWRTLPEKAGLKRCGKSCRLRWANY 60

Query: 61  LRPDIKRGSHPILGLSTLLNNQAQALNPESLRLISTLLALKQEDPNAN 109
           LRPDIKRG        T++  +  AL       I+T LA + ++   N
Sbjct: 61  LRPDIKRGEFSPEEDDTII--KLHALKGNKWAAIATSLAGRTDNEIKN 106

[Close]
BLAST of Cp4.1LG04g03280 vs. Swiss-Prot
Match: MYB80_ARATH (Transcription factor MYB80 OS=Arabidopsis thaliana GN=MYB80 PE=1 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.1e-26
Identity = 53/88 (60.23%), Postives = 62/88 (70.45%), Query Frame = 1 

Query: 1  MGRAPCCDKNGLKKGPWTPEEDQKLVGYIQIHGPGNWRNLPKKAGLQRCGKSCRLRWTNY 60
          MGR PCC+K  +K+G WTPEED KL  YI  HG  NWR +PK AGLQRCGKSCRLRWTNY
Sbjct: 1  MGRIPCCEKENVKRGQWTPEEDNKLASYIAQHGTRNWRLIPKNAGLQRCGKSCRLRWTNY 60

Query: 61 LRPDIKRG------SHPILGLSTLLNNQ 83
          LRPD+K G       H I+   ++L N+
Sbjct: 61 LRPDLKHGQFSEAEEHIIVKFHSVLGNR 88

[Close]
BLAST of Cp4.1LG04g03280 vs. Swiss-Prot
Match: MYB32_ARATH (Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.4e-26
Identity = 53/88 (60.23%), Postives = 65/88 (73.86%), Query Frame = 1 

Query: 1  MGRAPCCDKNGLKKGPWTPEEDQKLVGYIQIHGPGNWRNLPKKAGLQRCGKSCRLRWTNY 60
          MGR+PCC+K+   KG WT EED KL+ YI+ HG G WR+LP+ AGLQRCGKSCRLRW NY
Sbjct: 1  MGRSPCCEKDHTNKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINY 60

Query: 61 LRPDIKRGSHP------ILGLSTLLNNQ 83
          LRPD+KRG+        I+ L +LL N+
Sbjct: 61 LRPDLKRGNFTLEEDDLIIKLHSLLGNK 88

[Close]
BLAST of Cp4.1LG04g03280 vs. TrEMBL
Match: A0A0A0K293_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G046120 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 3.1e-44
Identity = 119/197 (60.41%), Postives = 144/197 (73.10%), Query Frame = 1 

Query: 69  SHPILGLSTLLNNQ--AQALNPESLRLISTLLALKQEDPNANNSHLQNEEHAQIQAQMDT 128
           SH +L LSTLLNN      LNPESLRLI TLL LKQ+DPNA+N  LQ +  AQIQAQMD+
Sbjct: 145 SHSLLSLSTLLNNHQTTATLNPESLRLIPTLLGLKQQDPNAHNLLLQAQAQAQIQAQMDS 204

Query: 129 LSQLLQPNDEINNNTNSSMIPITN-FVECSN-SQENMNFLASNLS-GDDV-----NHVY- 188
           LSQLLQPND +NN  +SS++PI++ FV+C N SQEN+NFL + L+ G+DV     N++Y 
Sbjct: 205 LSQLLQPNDNVNNTNSSSIMPISSTFVDCPNTSQENLNFLPTLLNCGEDVLMNQPNYIYG 264

Query: 189 DDGLKPKASD-----------FGFESVITTPKSSPTPLNSSSTCINN-SCNEDERDSFCS 243
            +G  P AS+            GF+SV    KSSPTPLNSSST +NN S NEDE+DSFCS
Sbjct: 265 GNGSNPTASEILDISNNNAQNLGFDSV----KSSPTPLNSSSTYLNNSSSNEDEKDSFCS 324

[Close]
BLAST of Cp4.1LG04g03280 vs. TrEMBL
Match: V4W3V4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017668mg PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.3e-34
Identity = 68/92 (73.91%), Postives = 75/92 (81.52%), Query Frame = 1 

Query: 1  MGRAPCCDKNGLKKGPWTPEEDQKLVGYIQIHGPGNWRNLPKKAGLQRCGKSCRLRWTNY 60
          MGRAPCCDKNGLKKGPWTPEED KL+ YIQ+HGPGNWRNLPK AGLQRCGKSCRLRWTNY
Sbjct: 1  MGRAPCCDKNGLKKGPWTPEEDHKLISYIQLHGPGNWRNLPKNAGLQRCGKSCRLRWTNY 60

Query: 61 LRPDIKRG------SHPILGLSTLLNNQAQAL 87
          LRPDIKRG         I+ L ++L N+  A+
Sbjct: 61 LRPDIKRGRFSFEEEETIIQLHSILGNKWSAI 92

[Close]
BLAST of Cp4.1LG04g03280 vs. TrEMBL
Match: A0A067EX67_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035629mg PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 1.3e-34
Identity = 68/92 (73.91%), Postives = 75/92 (81.52%), Query Frame = 1 

Query: 1  MGRAPCCDKNGLKKGPWTPEEDQKLVGYIQIHGPGNWRNLPKKAGLQRCGKSCRLRWTNY 60
          MGRAPCCDKNGLKKGPWTPEED KL+ YIQ+HGPGNWRNLPK AGLQRCGKSCRLRWTNY
Sbjct: 1  MGRAPCCDKNGLKKGPWTPEEDHKLISYIQLHGPGNWRNLPKNAGLQRCGKSCRLRWTNY 60

Query: 61 LRPDIKRG------SHPILGLSTLLNNQAQAL 87
          LRPDIKRG         I+ L ++L N+  A+
Sbjct: 61 LRPDIKRGRFSFEEEETIIQLHSILGNKWSAI 92

[Close]
BLAST of Cp4.1LG04g03280 vs. TrEMBL
Match: A0A022Q848_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a019583mg PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 6.5e-34
Identity = 118/310 (38.06%), Postives = 149/310 (48.06%), Query Frame = 1 

Query: 1   MGRAPCCDKNGLKKGPWTPEEDQKLVGYIQIHGPGNWRNLPKKAGLQRCGKSCRLRWTNY 60
           MGR+PCCDKN LKKGPWTPEED KL  +IQ+HGPGNWR LPK AGL+RCGKSCRLRWTNY
Sbjct: 1   MGRSPCCDKNTLKKGPWTPEEDAKLTHHIQMHGPGNWRTLPKIAGLERCGKSCRLRWTNY 60

Query: 61  LRPDIKRG------SHPILGLSTLLNNQAQALNPESLRLISTLLALKQEDPNANNSHLQN 120
           LRPDIKRG         I+ L ++L N+  A+   + RL         E  N  N+H++ 
Sbjct: 61  LRPDIKRGRFSFEEEETIIQLHSVLGNKWSAI---AARLPG---RTDNEIKNYWNTHIRK 120

Query: 121 E---------EHAQIQAQMDTLSQLLQPNDEINNNTNSSMIPITNFVEC--------SNS 180
                      HA     +D LS LL  + ++NN +N   +      E         S  
Sbjct: 121 RLLRMGIDPVTHAPRLDLLD-LSSLLVNSPQLNNLSNLICLQTIMNPEALRVALTLISPQ 180

Query: 181 QENMNFLASNLSGDDVNHVYDDGLKPKASDFGFESVIT--TPKSSPT------------- 240
            EN      N       +     ++P  S   F+++IT   P ++PT             
Sbjct: 181 NENQLLNYQNQHQHQFQNQAPSVIQPNQS--SFDNIITQQIPSNNPTTSSFNNQSQSLQV 240

Query: 241 PLNSSSTCIN-----------------------------NSCNEDERDSFCSNFLQFEIP 243
            L+SSS   N                             N   EDER+SFCSN L+FEIP
Sbjct: 241 DLSSSSPSENFGFDSVLSSTPLSSPAPPNTTSSAVGLTINGTTEDERESFCSNLLRFEIP 300

[Close]
BLAST of Cp4.1LG04g03280 vs. TrEMBL
Match: A0A067JN53_JATCU (MYB family protein OS=Jatropha curcas GN=JCGZ_25860 PE=4 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.1e-33
Identity = 66/92 (71.74%), Postives = 74/92 (80.43%), Query Frame = 1 

Query: 1  MGRAPCCDKNGLKKGPWTPEEDQKLVGYIQIHGPGNWRNLPKKAGLQRCGKSCRLRWTNY 60
          MGRAPCCDKNGLKKGPWTPEED KL+ YIQ+HGPGNWR LPK AGLQRCGKSCRLRWTNY
Sbjct: 1  MGRAPCCDKNGLKKGPWTPEEDHKLISYIQLHGPGNWRTLPKNAGLQRCGKSCRLRWTNY 60

Query: 61 LRPDIKRG------SHPILGLSTLLNNQAQAL 87
          LRPDIKRG         I+ L +++ N+  A+
Sbjct: 61 LRPDIKRGRFSFEEEESIIQLHSIMGNKWSAI 92

[Close]
BLAST of Cp4.1LG04g03280 vs. TAIR10
Match: AT4G05100.1 (AT4G05100.1 myb domain protein 74)

HSP 1 Score: 141.0 bits (354), Expect = 9.9e-34
Identity = 64/93 (68.82%), Postives = 73/93 (78.49%), Query Frame = 1 

Query: 1  MGRAPCCDK-NGLKKGPWTPEEDQKLVGYIQIHGPGNWRNLPKKAGLQRCGKSCRLRWTN 60
          MGR+PCC+K NGLKKGPWTPEEDQKL+ YI IHG GNWR LPK AGLQRCGKSCRLRWTN
Sbjct: 1  MGRSPCCEKKNGLKKGPWTPEEDQKLIDYINIHGYGNWRTLPKNAGLQRCGKSCRLRWTN 60

Query: 61 YLRPDIKRG------SHPILGLSTLLNNQAQAL 87
          YLRPDIKRG         I+ L +++ N+  A+
Sbjct: 61 YLRPDIKRGRFSFEEEETIIQLHSIMGNKWSAI 93

[Close]
BLAST of Cp4.1LG04g03280 vs. TAIR10
Match: AT4G21440.1 (AT4G21440.1 MYB-like 102)

HSP 1 Score: 139.8 bits (351), Expect = 2.2e-33
Identity = 64/92 (69.57%), Postives = 70/92 (76.09%), Query Frame = 1 

Query: 1  MGRAPCCDKNGLKKGPWTPEEDQKLVGYIQIHGPGNWRNLPKKAGLQRCGKSCRLRWTNY 60
          M R+PCC+KNGLKKGPWT EEDQKLV YIQ HG GNWR LPK AGLQRCGKSCRLRWTNY
Sbjct: 1  MARSPCCEKNGLKKGPWTSEEDQKLVDYIQKHGYGNWRTLPKNAGLQRCGKSCRLRWTNY 60

Query: 61 LRPDIKRG------SHPILGLSTLLNNQAQAL 87
          LRPDIKRG         I+ L + L N+  A+
Sbjct: 61 LRPDIKRGRFSFEEEETIIQLHSFLGNKWSAI 92

[Close]
BLAST of Cp4.1LG04g03280 vs. TAIR10
Match: AT5G15310.1 (AT5G15310.1 myb domain protein 16)

HSP 1 Score: 138.7 bits (348), Expect = 4.9e-33
Identity = 68/115 (59.13%), Postives = 83/115 (72.17%), Query Frame = 1 

Query: 1   MGRAPCCDKNGLKKGPWTPEEDQKLVGYIQIHGPGNWRNLPKKAGLQRCGKSCRLRWTNY 60
           MGR+PCCDK GLKKGPWTPEEDQKL+ YI+ HG G+WR+LP+KAGL RCGKSCRLRWTNY
Sbjct: 1   MGRSPCCDKLGLKKGPWTPEEDQKLLAYIEEHGHGSWRSLPEKAGLHRCGKSCRLRWTNY 60

Query: 61  LRPDIKRGSHPILGLSTLLNNQAQALNPESLRLISTLLALKQEDPNAN--NSHLQ 114
           LRPDIKRG   +    T++  Q  AL       I+T L  + ++   N  N+HL+
Sbjct: 61  LRPDIKRGKFNLQEEQTII--QLHALLGNRWSAIATHLPKRTDNEIKNYWNTHLK 113

[Close]
BLAST of Cp4.1LG04g03280 vs. TAIR10
Match: AT4G28110.1 (AT4G28110.1 myb domain protein 41)

HSP 1 Score: 137.9 bits (346), Expect = 8.3e-33
Identity = 70/169 (41.42%), Postives = 101/169 (59.76%), Query Frame = 1 

Query: 1   MGRAPCCDKNGLKKGPWTPEEDQKLVGYIQIHGPGNWRNLPKKAGLQRCGKSCRLRWTNY 60
           MGR+PCCDKNG+KKGPWT EEDQKL+ YI+ HGPGNWR LPK AGL RCGKSCRLRWTNY
Sbjct: 1   MGRSPCCDKNGVKKGPWTAEEDQKLIDYIRFHGPGNWRTLPKNAGLHRCGKSCRLRWTNY 60

Query: 61  LRPDIKRGSHPILGLSTLLNNQAQALNPESLRLISTLLALKQEDPNANNSHLQNEEHAQI 120
           LRPDIKRG        T++   +   N  S        A+    P   ++ ++N  +  I
Sbjct: 61  LRPDIKRGRFSFEEEETIIQLHSVMGNKWS--------AIAARLPGRTDNEIKNHWNTHI 120

Query: 121 QAQMDTLSQLLQPNDEINNNTNSSMIPITNFVECSNSQENMNFLASNLS 170
           + ++     +    D + ++    ++ +++ +    +Q N + +A++ S
Sbjct: 121 RKRL-----VRSGIDPVTHSPRLDLLDLSSLLSALFNQPNFSAVATHAS 156

[Close]
BLAST of Cp4.1LG04g03280 vs. TAIR10
Match: AT3G02940.1 (AT3G02940.1 myb domain protein 107)

HSP 1 Score: 137.5 bits (345), Expect = 1.1e-32
Identity = 60/88 (68.18%), Postives = 72/88 (81.82%), Query Frame = 1 

Query: 1  MGRAPCCDKNGLKKGPWTPEEDQKLVGYIQIHGPGNWRNLPKKAGLQRCGKSCRLRWTNY 60
          MGR+PCCD++GLKKGPWTPEEDQKL+ +I+ HG G+WR LPK+AGL RCGKSCRLRWTNY
Sbjct: 1  MGRSPCCDESGLKKGPWTPEEDQKLINHIRKHGHGSWRALPKQAGLNRCGKSCRLRWTNY 60

Query: 61 LRPDIKRGS------HPILGLSTLLNNQ 83
          LRPDIKRG+        I+ L +LL N+
Sbjct: 61 LRPDIKRGNFTAEEEQTIINLHSLLGNK 88

[Close]
BLAST of Cp4.1LG04g03280 vs. NCBI nr
Match: gi|659110693|ref|XP_008455362.1| (PREDICTED: transcription factor MYB39 [Cucumis melo])

HSP 1 Score: 199.1 bits (505), Expect = 8.6e-48
Identity = 125/197 (63.45%), Postives = 149/197 (75.63%), Query Frame = 1 

Query: 69  SHPILGLSTLLNNQ--AQALNPESLRLISTLLALKQEDPNANNSHLQNEEHAQIQAQMDT 128
           SHP+LGLSTLLNN      LNPESLRLISTLL+LKQED NA+N  LQ +  AQIQAQMD+
Sbjct: 145 SHPLLGLSTLLNNHQTTTTLNPESLRLISTLLSLKQEDQNAHNLLLQAQAQAQIQAQMDS 204

Query: 129 LSQLLQPNDEINNNTNSSMIPITN-FVECSN-SQENMNFLASNLS-GDDV-----NHVY- 188
           LSQLLQPND +NN  +SS++PI++ FV+CSN SQEN+NFL +NL+ G+DV     N++Y 
Sbjct: 205 LSQLLQPNDNVNNTNSSSVMPISSTFVDCSNTSQENLNFLPTNLNCGEDVLMNQHNYMYG 264

Query: 189 DDGLKPKASD-----------FGFESVITTPKSSPTPLNSSSTCINN-SCNEDERDSFCS 243
            DG  P AS+            GF+SV    KSSPTPLNSSST +NN S NEDE+DSFCS
Sbjct: 265 GDGSNPTASEILDISNNNAQTLGFDSV----KSSPTPLNSSSTYLNNSSSNEDEKDSFCS 324

[Close]
BLAST of Cp4.1LG04g03280 vs. NCBI nr
Match: gi|449438470|ref|XP_004137011.1| (PREDICTED: transcription repressor MYB6-like [Cucumis sativus])

HSP 1 Score: 186.8 bits (473), Expect = 4.4e-44
Identity = 119/197 (60.41%), Postives = 144/197 (73.10%), Query Frame = 1 

Query: 69  SHPILGLSTLLNNQ--AQALNPESLRLISTLLALKQEDPNANNSHLQNEEHAQIQAQMDT 128
           SH +L LSTLLNN      LNPESLRLI TLL LKQ+DPNA+N  LQ +  AQIQAQMD+
Sbjct: 145 SHSLLSLSTLLNNHQTTATLNPESLRLIPTLLGLKQQDPNAHNLLLQAQAQAQIQAQMDS 204

Query: 129 LSQLLQPNDEINNNTNSSMIPITN-FVECSN-SQENMNFLASNLS-GDDV-----NHVY- 188
           LSQLLQPND +NN  +SS++PI++ FV+C N SQEN+NFL + L+ G+DV     N++Y 
Sbjct: 205 LSQLLQPNDNVNNTNSSSIMPISSTFVDCPNTSQENLNFLPTLLNCGEDVLMNQPNYIYG 264

Query: 189 DDGLKPKASD-----------FGFESVITTPKSSPTPLNSSSTCINN-SCNEDERDSFCS 243
            +G  P AS+            GF+SV    KSSPTPLNSSST +NN S NEDE+DSFCS
Sbjct: 265 GNGSNPTASEILDISNNNAQNLGFDSV----KSSPTPLNSSSTYLNNSSSNEDEKDSFCS 324

[Close]
BLAST of Cp4.1LG04g03280 vs. NCBI nr
Match: gi|641836837|gb|KDO55797.1| (hypothetical protein CISIN_1g035629mg [Citrus sinensis])

HSP 1 Score: 154.8 bits (390), Expect = 1.9e-34
Identity = 68/92 (73.91%), Postives = 75/92 (81.52%), Query Frame = 1 

Query: 1  MGRAPCCDKNGLKKGPWTPEEDQKLVGYIQIHGPGNWRNLPKKAGLQRCGKSCRLRWTNY 60
          MGRAPCCDKNGLKKGPWTPEED KL+ YIQ+HGPGNWRNLPK AGLQRCGKSCRLRWTNY
Sbjct: 1  MGRAPCCDKNGLKKGPWTPEEDHKLISYIQLHGPGNWRNLPKNAGLQRCGKSCRLRWTNY 60

Query: 61 LRPDIKRG------SHPILGLSTLLNNQAQAL 87
          LRPDIKRG         I+ L ++L N+  A+
Sbjct: 61 LRPDIKRGRFSFEEEETIIQLHSILGNKWSAI 92

[Close]
BLAST of Cp4.1LG04g03280 vs. NCBI nr
Match: gi|568831103|ref|XP_006469819.1| (PREDICTED: transcription factor MYB35 [Citrus sinensis])

HSP 1 Score: 154.8 bits (390), Expect = 1.9e-34
Identity = 68/92 (73.91%), Postives = 75/92 (81.52%), Query Frame = 1 

Query: 1  MGRAPCCDKNGLKKGPWTPEEDQKLVGYIQIHGPGNWRNLPKKAGLQRCGKSCRLRWTNY 60
          MGRAPCCDKNGLKKGPWTPEED KL+ YIQ+HGPGNWRNLPK AGLQRCGKSCRLRWTNY
Sbjct: 1  MGRAPCCDKNGLKKGPWTPEEDHKLISYIQLHGPGNWRNLPKNAGLQRCGKSCRLRWTNY 60

Query: 61 LRPDIKRG------SHPILGLSTLLNNQAQAL 87
          LRPDIKRG         I+ L ++L N+  A+
Sbjct: 61 LRPDIKRGRFSFEEEETIIQLHSILGNKWSAI 92

[Close]
BLAST of Cp4.1LG04g03280 vs. NCBI nr
Match: gi|567910181|ref|XP_006447404.1| (hypothetical protein CICLE_v10017668mg [Citrus clementina])

HSP 1 Score: 154.8 bits (390), Expect = 1.9e-34
Identity = 68/92 (73.91%), Postives = 75/92 (81.52%), Query Frame = 1 

Query: 1  MGRAPCCDKNGLKKGPWTPEEDQKLVGYIQIHGPGNWRNLPKKAGLQRCGKSCRLRWTNY 60
          MGRAPCCDKNGLKKGPWTPEED KL+ YIQ+HGPGNWRNLPK AGLQRCGKSCRLRWTNY
Sbjct: 1  MGRAPCCDKNGLKKGPWTPEEDHKLISYIQLHGPGNWRNLPKNAGLQRCGKSCRLRWTNY 60

Query: 61 LRPDIKRG------SHPILGLSTLLNNQAQAL 87
          LRPDIKRG         I+ L ++L N+  A+
Sbjct: 61 LRPDIKRGRFSFEEEETIIQLHSILGNKWSAI 92

The following BLAST results are available for this feature:
BLAST of Cp4.1LG04g03280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MYB4_ORYSJ4.8e-3051.11Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4 PE=2 SV=2[more]
MYB06_ANTMA2.0e-2864.13Myb-related protein 306 OS=Antirrhinum majus GN=MYB306 PE=2 SV=1[more]
MYB34_ARATH1.7e-2753.70Transcription factor MYB34 OS=Arabidopsis thaliana GN=MYB34 PE=1 SV=1[more]
MYB80_ARATH1.1e-2660.23Transcription factor MYB80 OS=Arabidopsis thaliana GN=MYB80 PE=1 SV=1[more]
MYB32_ARATH1.4e-2660.23Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1[more]
BLAST of Cp4.1LG04g03280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K293_CUCSA3.1e-4460.41Uncharacterized protein OS=Cucumis sativus GN=Csa_7G046120 PE=4 SV=1[more]
V4W3V4_9ROSI1.3e-3473.91Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017668mg PE=4 SV=1[more]
A0A067EX67_CITSI1.3e-3473.91Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035629mg PE=4 SV=1[more]
A0A022Q848_ERYGU6.5e-3438.06Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a019583mg PE=4 SV=1[more]
A0A067JN53_JATCU1.1e-3371.74MYB family protein OS=Jatropha curcas GN=JCGZ_25860 PE=4 SV=1[more]
BLAST of Cp4.1LG04g03280 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G05100.19.9e-3468.82 myb domain protein 74[more]
AT4G21440.12.2e-3369.57 MYB-like 102[more]
AT5G15310.14.9e-3359.13 myb domain protein 16[more]
AT4G28110.18.3e-3341.42 myb domain protein 41[more]
AT3G02940.11.1e-3268.18 myb domain protein 107[more]
BLAST of Cp4.1LG04g03280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110693|ref|XP_008455362.1|8.6e-4863.45PREDICTED: transcription factor MYB39 [Cucumis melo][more]
gi|449438470|ref|XP_004137011.1|4.4e-4460.41PREDICTED: transcription repressor MYB6-like [Cucumis sativus][more]
gi|641836837|gb|KDO55797.1|1.9e-3473.91hypothetical protein CISIN_1g035629mg [Citrus sinensis][more]
gi|568831103|ref|XP_006469819.1|1.9e-3473.91PREDICTED: transcription factor MYB35 [Citrus sinensis][more]
gi|567910181|ref|XP_006447404.1|1.9e-3473.91hypothetical protein CICLE_v10017668mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR017930Myb_dom
IPR009057Homeobox-like_sf
IPR001005SANT/Myb
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003677 DNA binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG04g03280.1Cp4.1LG04g03280.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 14..61
score: 5.4
IPR001005SANT/Myb domainSMARTSM00717santcoord: 13..63
score: 2.7
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 5..69
score: 9.2
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 15..71
score: 3.46
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 9..65
score: 25
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 1..69
score: 2.9
NoneNo IPR availablePANTHERPTHR10641:SF586MYB TRANSCRIPTION FACTOR-RELATEDcoord: 1..69
score: 2.9

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG04g03280CmaCh11G018530Cucurbita maxima (Rimu)cmacpeB148
Cp4.1LG04g03280CmaCh19G009580Cucurbita maxima (Rimu)cmacpeB537
Cp4.1LG04g03280CmaCh20G006540Cucurbita maxima (Rimu)cmacpeB574
Cp4.1LG04g03280CmoCh20G005930Cucurbita moschata (Rifu)cmocpeB525
Cp4.1LG04g03280CmoCh11G019280Cucurbita moschata (Rifu)cmocpeB126
Cp4.1LG04g03280CmoCh19G009880Cucurbita moschata (Rifu)cmocpeB492
Cp4.1LG04g03280MELO3C018773.2Melon (DHL92) v3.6.1cpemedB721
Cp4.1LG04g03280MELO3C007330.2Melon (DHL92) v3.6.1cpemedB773
Cp4.1LG04g03280CsaV3_7G004070Cucumber (Chinese Long) v3cpecucB0863
Cp4.1LG04g03280CsaV3_6G049630Cucumber (Chinese Long) v3cpecucB0855
Cp4.1LG04g03280Bhi05G001567Wax gourdcpewgoB0844
Cp4.1LG04g03280CsGy7G003850Cucumber (Gy14) v2cgybcpeB964
Cp4.1LG04g03280Carg19209Silver-seed gourdcarcpeB1223
Cp4.1LG04g03280Carg19097Silver-seed gourdcarcpeB1015
Cp4.1LG04g03280Carg14658Silver-seed gourdcarcpeB0217
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG04g03280Cp4.1LG15g07840Cucurbita pepo (Zucchini)cpecpeB267
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG04g03280Wax gourdcpewgoB0865
Cp4.1LG04g03280Cucurbita pepo (Zucchini)cpecpeB056
Cp4.1LG04g03280Cucurbita pepo (Zucchini)cpecpeB492
Cp4.1LG04g03280Cucumber (Gy14) v1cgycpeB0329
Cp4.1LG04g03280Cucumber (Gy14) v1cgycpeB0395
Cp4.1LG04g03280Cucurbita maxima (Rimu)cmacpeB642
Cp4.1LG04g03280Cucurbita moschata (Rifu)cmocpeB592
Cp4.1LG04g03280Wild cucumber (PI 183967)cpecpiB692
Cp4.1LG04g03280Cucumber (Chinese Long) v2cpecuB690
Cp4.1LG04g03280Bottle gourd (USVL1VR-Ls)cpelsiB521
Cp4.1LG04g03280Bottle gourd (USVL1VR-Ls)cpelsiB526
Cp4.1LG04g03280Watermelon (Charleston Gray)cpewcgB596
Cp4.1LG04g03280Watermelon (97103) v1cpewmB666
Cp4.1LG04g03280Melon (DHL92) v3.5.1cpemeB609
Cp4.1LG04g03280Silver-seed gourdcarcpeB0047