CsGy7G003850 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G003850
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	transcription factor MYB39
Location	Chr7 : 2931386 .. 2933137 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTACATACAAAAACAAACACGTGGCATTTAGGACGGCACCAAATACGTTTGACTTAAAATAATATTTGGAAATTTCGGCTTTCCATTCACCTTCAAATCTGTATATAAGAACTTCATCTTCTTCGTACAATTCTCAGCACAAAAAACCAAACACTTTTTCCCTTTTTCTCTCTCTTTCTCTCTCTAAATTCAATTTTTCTTTTTCACTTTATCAAACTTTTAGTCTCTTCATTGAAAACAGTCATAAAAAACAAATGGGGAGAGCTCCATGCTGTGACAAAAATGGGCTTAAAAAAGGTCCATGGACTCCTGAGGAAGATCAGAAGCTTGTTAATTATATTCAAATTCATGGCCCTGGGAATTGGCGTAATCTTCCTAAGAATGCTGGTATGTTTCTGTTTTTCTTTTTTTTTTTTTTTTTCTTTTATAATTATAATTATAATTAAATTATTTTTGTTTATTTATTTATAGGGCTTCAAAGATGTGGAAAAAGTTGTAGGCTTCGATGGACCAATTATTTGAGACCTGATATTAAGAGAGGCAGATTTTCTTTTGAAGAAGAAGAGACTATTATTCAATTGCACAGTGTTTTGGGAAACAAGTAAGATTATTTTTCTTTTCTTTTCTGGGTTTTTCTTTTTTGAAAAACAAAATCCAGAAAGTTTGTTGATTAAAGAATTAAATTCTTTTTTGTTTCTAGCTATGATTGGATTAACTGATTGGGAAGAATACTTAATGACTAATCCCAATTAATGATCTCTTGATATTATATCCCTCTGACGTTCATTTCTCATGGTAGACTACAAAATTAGCTTAACACATGAACCAATAATTATCAATATTAATGAACTAGACTTAAATATATCTTATTCATCTTTCTTAAGGTTTTTCTCGCTTAATGGGTAATAATTAAGACTGCAATTAGCCTAAAAGCTAAAGAAGATATATAAAGATTATGTGTTATTTAATTGATTATTAATGTTTTTGCTCGTTTCAGGTGGTCAGCAATAGCTGCTCGCTTACCTGGAAGAACAGATAACGAGATCAAGAATTATTGGAACACCCACATACGAAAAAGGCTCCTTCGAATGGGAATCGATCCGGTGACCCACGCACCTCGGATTGATCTTCTTGACCTATCGTCGATTCTCTCTGCCGCCATTCGAAGCCACTCACTCCTCAGCCTATCAACCTTATTGAACAACCACCAAACTACCGCAACCCTAAATCCTGAATCTCTTAGGCTAATTCCCACCCTTTTAGGCCTTAAACAACAAGATCCAAATGCCCATAATTTACTTCTCCAAGCTCAGGCTCAGGCTCAAATTCAAGCTCAAATGGATTCATTATCACAACTCTTACAACCCAACGATAATGTTAATAATACAAATTCTTCTTCAATAATGCCCATATCTTCTACCTTTGTTGACTGCCCAAATACTTCGCAAGAAAATCTTAATTTCTTACCTACACTTTTGAATTGTGGTGAGGATGTTTTGATGAACCAACCCAATTACATATACGGCGGCAATGGGTCGAATCCAACGGCTTCGGAAATTCTCGACATTTCAAATAACAATGCTCAAAATTTAGGGTTTGATTCTGTAAAATCAAGCCCTACGCCATTGAATTCTTCATCTACTTATTTAAACAACAGCAGCAGCAATGAGGATGAGAAAGATAGTTTTTGTAGTAACTTTTTGCAGTTTGAAATTCCTGAAGGTTTGGACTTTGCTGATTTTGTGTAA

mRNA sequence

ATGATTACATACAAAAACAAACACGTGGCATTTAGGACGGCACCAAATACCCTATCAACCTTATTGAACAACCACCAAACTACCGCAACCCTAAATCCTGAATCTCTTAGGCTAATTCCCACCCTTTTAGGCCTTAAACAACAAGATCCAAATGCCCATAATTTACTTCTCCAAGCTCAGGCTCAGGCTCAAATTCAAGCTCAAATGGATTCATTATCACAACTCTTACAACCCAACGATAATGTTAATAATACAAATTCTTCTTCAATAATGCCCATATCTTCTACCTTTGTTGACTGCCCAAATACTTCGCAAGAAAATCTTAATTTCTTACCTACACTTTTGAATTGTGGTGAGGATGTTTTGATGAACCAACCCAATTACATATACGGCGGCAATGGGTCGAATCCAACGGCTTCGGAAATTCTCGACATTTCAAATAACAATGCTCAAAATTTAGGGTTTGATTCTGTAAAATCAAGCCCTACGCCATTGAATTCTTCATCTACTTATTTAAACAACAGCAGCAGCAATGAGGATGAGAAAGATAGTTTTTGTAGTAACTTTTTGCAGTTTGAAATTCCTGAAGGTTTGGACTTTGCTGATTTTGTGTAA

Coding sequence (CDS)

ATGATTACATACAAAAACAAACACGTGGCATTTAGGACGGCACCAAATACCCTATCAACCTTATTGAACAACCACCAAACTACCGCAACCCTAAATCCTGAATCTCTTAGGCTAATTCCCACCCTTTTAGGCCTTAAACAACAAGATCCAAATGCCCATAATTTACTTCTCCAAGCTCAGGCTCAGGCTCAAATTCAAGCTCAAATGGATTCATTATCACAACTCTTACAACCCAACGATAATGTTAATAATACAAATTCTTCTTCAATAATGCCCATATCTTCTACCTTTGTTGACTGCCCAAATACTTCGCAAGAAAATCTTAATTTCTTACCTACACTTTTGAATTGTGGTGAGGATGTTTTGATGAACCAACCCAATTACATATACGGCGGCAATGGGTCGAATCCAACGGCTTCGGAAATTCTCGACATTTCAAATAACAATGCTCAAAATTTAGGGTTTGATTCTGTAAAATCAAGCCCTACGCCATTGAATTCTTCATCTACTTATTTAAACAACAGCAGCAGCAATGAGGATGAGAAAGATAGTTTTTGTAGTAACTTTTTGCAGTTTGAAATTCCTGAAGGTTTGGACTTTGCTGATTTTGTGTAA

Protein sequence

MITYKNKHVAFRTAPNTLSTLLNNHQTTATLNPESLRLIPTLLGLKQQDPNAHNLLLQAQAQAQIQAQMDSLSQLLQPNDNVNNTNSSSIMPISSTFVDCPNTSQENLNFLPTLLNCGEDVLMNQPNYIYGGNGSNPTASEILDISNNNAQNLGFDSVKSSPTPLNSSSTYLNNSSSNEDEKDSFCSNFLQFEIPEGLDFADFV

Homology

[Close]

BLAST of CsGy7G003850 vs. NCBI nr
Match: XP_004137011.1 (PREDICTED: transcription repressor MYB6-like [Cucumis sativus] >KGN43573.1 hypothetical protein Csa_7G046120 [Cucumis sativus])

HSP 1 Score: 335.1 bits (858), Expect = 1.7e-88
Identity = 187/188 (99.47%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 17  TLSTLLNNHQTTATLNPESLRLIPTLLGLKQQDPNAHNLLLQXXXXXXXXXXXXXLSQLL 76
           +LSTLLNNHQTTATLNPESLRLIPTLLGLKQQDPNAHNLLLQXXXXXXXXXXXXXLSQLL
Sbjct: 150 SLSTLLNNHQTTATLNPESLRLIPTLLGLKQQDPNAHNLLLQXXXXXXXXXXXXXLSQLL 209

Query: 77  QPNDNVNNTNSSSIMPISSTFVDCPNTSQENLNFLPTLLNCGEDVLMNQPNYIYGGNGSN 136
           QPNDNVNNTNSSSIMPISSTFVDCPNTSQENLNFLPTLLNCGEDVLMNQPNYIYGGNGSN
Sbjct: 210 QPNDNVNNTNSSSIMPISSTFVDCPNTSQENLNFLPTLLNCGEDVLMNQPNYIYGGNGSN 269

Query: 137 PTASEILDISNNNAQNLGFDSVKSSPTPLNSSSTYLNNSSSNEDEKDSFCSNFLQFEIPE 196
           PTASEILDISNNNAQNLGFDSVKSSPTPLNSSSTYLNNSSSNEDEKDSFCSNFLQFEIPE
Sbjct: 270 PTASEILDISNNNAQNLGFDSVKSSPTPLNSSSTYLNNSSSNEDEKDSFCSNFLQFEIPE 329

Query: 197 GLDFADFV 205
           GLDFADFV
Sbjct: 330 GLDFADFV 337

[Close]

BLAST of CsGy7G003850 vs. NCBI nr
Match: XP_008455362.1 (PREDICTED: transcription factor MYB39 [Cucumis melo])

HSP 1 Score: 308.5 bits (789), Expect = 1.7e-80
Identity = 175/187 (93.58%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 18  LSTLLNNHQTTATLNPESLRLIPTLLGLKQQDPNAHNLLLQXXXXXXXXXXXXXLSQLLQ 77
           LSTLLNNHQTT TLNPESLRLI TLL LKQ+D NAHNLLLQXXXXXXXXXXXXXLSQLLQ
Sbjct: 151 LSTLLNNHQTTTTLNPESLRLISTLLSLKQEDQNAHNLLLQXXXXXXXXXXXXXLSQLLQ 210

Query: 78  PNDNVNNTNSSSIMPISSTFVDCPNTSQENLNFLPTLLNCGEDVLMNQPNYIYGGNGSNP 137
           PNDNVNNTNSSS+MPISSTFVDC NTSQENLNFLPT LNCGEDVLMNQ NY+YGG+GSNP
Sbjct: 211 PNDNVNNTNSSSVMPISSTFVDCSNTSQENLNFLPTNLNCGEDVLMNQHNYMYGGDGSNP 270

Query: 138 TASEILDISNNNAQNLGFDSVKSSPTPLNSSSTYLNNSSSNEDEKDSFCSNFLQFEIPEG 197
           TASEILDISNNNAQ LGFDSVKSSPTPLNSSSTYLNNSSSNEDEKDSFCSNFLQFEIPEG
Sbjct: 271 TASEILDISNNNAQTLGFDSVKSSPTPLNSSSTYLNNSSSNEDEKDSFCSNFLQFEIPEG 330

Query: 198 LDFADFV 205
           LDFADFV
Sbjct: 331 LDFADFV 337

[Close]

BLAST of CsGy7G003850 vs. NCBI nr
Match: XP_022969164.1 (transcription factor MYB41-like [Cucurbita maxima])

HSP 1 Score: 217.2 bits (552), Expect = 5.0e-53
Identity = 137/192 (71.35%), Postives = 159/192 (82.81%), Query Frame = 0


Query: 17  TLSTLLNNHQTTATLNPESLRLIPTLLGLKQQDPNAHNLLLQXXXXXXXXXXXXXLSQLL 76
           +LSTLLNN+Q  A LN ES+RL+ TLL ++Q+DPN +  LLQ XXXXXXXXXX  LSQLL
Sbjct: 150 SLSTLLNNNQ-AAGLNSESVRLMSTLLAIRQEDPNDNRFLLQAXXXXXXXXXXDTLSQLL 209

Query: 77  QPNDNVNNTNSSSIMPISSTFVDCPNTSQENLNFLPTLLNCGEDVLMNQPNYIYGGNGSN 136
           QPNDNVNN N+SS MPI S FV+CPN SQENLNFLP+ L+ GEDVL+NQPNY+YG NGSN
Sbjct: 210 QPNDNVNNANASS-MPI-SRFVECPN-SQENLNFLPSNLS-GEDVLVNQPNYVYGENGSN 269

Query: 137 PTASEILDISNNNAQNLGFDSV----KSSPTPLNSSSTYLNNSSSNEDEKDSFCSNFLQF 196
           PTAS + +  N++ QNLGFD V    KSSPTPLNSSST +NNSSSNEDE+DS+CSNF QF
Sbjct: 270 PTASNLPETWNDDVQNLGFDCVISTPKSSPTPLNSSSTCVNNSSSNEDERDSYCSNFFQF 329

Query: 197 EIPEGLDFADFV 205
           EIPEGLDFAD +
Sbjct: 330 EIPEGLDFADLM 336

[Close]

BLAST of CsGy7G003850 vs. NCBI nr
Match: XP_022952800.1 (transcription factor MYB41 [Cucurbita moschata])

HSP 1 Score: 214.5 bits (545), Expect = 3.3e-52
Identity = 138/192 (71.88%), Postives = 158/192 (82.29%), Query Frame = 0


Query: 17  TLSTLLNNHQTTATLNPESLRLIPTLLGLKQQDPNAHNLLLQXXXXXXXXXXXXXLSQLL 76
           +LSTLLNN+Q  A LN ESLRLI TLL +KQ+DPN +  LLQ  XXXXXXXXX  LSQLL
Sbjct: 150 SLSTLLNNNQ-AAGLNSESLRLISTLLAIKQEDPNDNRFLLQAQXXXXXXXXXDTLSQLL 209

Query: 77  QPNDNVNNTNSSSIMPISSTFVDCPNTSQENLNFLPTLLNCGEDVLMNQPNYIYGGNGSN 136
           QPNDNVN+ N+SS MPI STF + P  SQENLNFLP+ L+ G DVL+NQPNY+YG NGSN
Sbjct: 210 QPNDNVNDANASS-MPI-STFDEFP-YSQENLNFLPSNLS-GGDVLVNQPNYVYGENGSN 269

Query: 137 PTASEILDISNNNAQNLGFDSV----KSSPTPLNSSSTYLNNSSSNEDEKDSFCSNFLQF 196
           PTAS++ +I NN+ QNLGFD V    KSSPTPLNSSST +NNSSSNEDE+DS+CSNFLQF
Sbjct: 270 PTASDLPEIWNNDVQNLGFDCVISTPKSSPTPLNSSSTCVNNSSSNEDERDSYCSNFLQF 329

Query: 197 EIPEGLDFADFV 205
           EIPEGLDFAD +
Sbjct: 330 EIPEGLDFADLM 336

[Close]

BLAST of CsGy7G003850 vs. NCBI nr
Match: XP_023554539.1 (transcription factor MYB102-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 204.1 bits (518), Expect = 4.4e-49
Identity = 136/196 (69.39%), Postives = 157/196 (80.10%), Query Frame = 0


Query: 17  TLSTLLNNHQTTATLNPESLRLIPTLLGLKQQDPNAHNLLLQXXXXXXXXXXXXXLSQLL 76
           +LSTLLNN+Q  A LN ESLRLI TLL +KQ+DPN +  LLQ XXXXXXXXXX  LSQLL
Sbjct: 150 SLSTLLNNNQ-AAGLNSESLRLISTLLAIKQEDPNDNRFLLQAXXXXXXXXXXDTLSQLL 209

Query: 77  QPNDNVNNTNSSSIMPISSTFVDCPNTSQENLNFLPTLLNCGEDVLMNQPNYIY---GGN 136
           QPNDNVNN N+SS MPIS+TFV+CPN SQENLNFL + L+ G DVL+NQPNY+Y   G N
Sbjct: 210 QPNDNVNNANASS-MPISTTFVECPN-SQENLNFLASNLS-GGDVLVNQPNYVYGENGSN 269

Query: 137 GSNPTASEILDISNNNAQNLGFD----SVKSSPTPLNSSSTYLN-NSSSNEDEKDSFCSN 196
           GSNPTAS++ +I NN+ QNLGFD    + KSSPTPLNSSST +N     NEDE+DS+ SN
Sbjct: 270 GSNPTASDLPEIWNNDVQNLGFDCGISTPKSSPTPLNSSSTCVNXXXXXNEDERDSYRSN 329

Query: 197 FLQFEIPEGLDFADFV 205
           FLQFEIPEGLDFAD +
Sbjct: 330 FLQFEIPEGLDFADLM 341

[Close]

BLAST of CsGy7G003850 vs. TAIR10
Match: AT4G21440.1 (MYB-like 102)

HSP 1 Score: 45.8 bits (107), Expect = 3.6e-05
Identity = 25/57 (43.86%), Postives = 39/57 (68.42%), Query Frame = 0


Query: 149 NAQNLGFDSVKSSPTPLNSSSTYLNNSS-SNEDEKDSFCSNFLQFEIPEGLDFADFV 205
           N  N   ++  SSP+P   +S+Y+N+SS S EDE +S+CSN ++F+IP+ LD   F+
Sbjct: 293 NFANSVLNTPSSSPSPTTLNSSYINSSSCSTEDEIESYCSNLMKFDIPDFLDVNGFI 349

[Close]

BLAST of CsGy7G003850 vs. Swiss-Prot
Match: sp|Q9LDR8|MY102_ARATH (Transcription factor MYB102 OS=Arabidopsis thaliana OX=3702 GN=MYB102 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 6.6e-04
Identity = 25/57 (43.86%), Postives = 39/57 (68.42%), Query Frame = 0


Query: 149 NAQNLGFDSVKSSPTPLNSSSTYLNNSS-SNEDEKDSFCSNFLQFEIPEGLDFADFV 205
           N  N   ++  SSP+P   +S+Y+N+SS S EDE +S+CSN ++F+IP+ LD   F+
Sbjct: 293 NFANSVLNTPSSSPSPTTLNSSYINSSSCSTEDEIESYCSNLMKFDIPDFLDVNGFI 349

[Close]

BLAST of CsGy7G003850 vs. TrEMBL
Match: tr|A0A0A0K293|A0A0A0K293_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046120 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 1.1e-88
Identity = 187/188 (99.47%), Postives = 188/188 (100.00%), Query Frame = 0


Query: 17  TLSTLLNNHQTTATLNPESLRLIPTLLGLKQQDPNAHNLLLQXXXXXXXXXXXXXLSQLL 76
           +LSTLLNNHQTTATLNPESLRLIPTLLGLKQQDPNAHNLLLQXXXXXXXXXXXXXLSQLL
Sbjct: 150 SLSTLLNNHQTTATLNPESLRLIPTLLGLKQQDPNAHNLLLQXXXXXXXXXXXXXLSQLL 209

Query: 77  QPNDNVNNTNSSSIMPISSTFVDCPNTSQENLNFLPTLLNCGEDVLMNQPNYIYGGNGSN 136
           QPNDNVNNTNSSSIMPISSTFVDCPNTSQENLNFLPTLLNCGEDVLMNQPNYIYGGNGSN
Sbjct: 210 QPNDNVNNTNSSSIMPISSTFVDCPNTSQENLNFLPTLLNCGEDVLMNQPNYIYGGNGSN 269

Query: 137 PTASEILDISNNNAQNLGFDSVKSSPTPLNSSSTYLNNSSSNEDEKDSFCSNFLQFEIPE 196
           PTASEILDISNNNAQNLGFDSVKSSPTPLNSSSTYLNNSSSNEDEKDSFCSNFLQFEIPE
Sbjct: 270 PTASEILDISNNNAQNLGFDSVKSSPTPLNSSSTYLNNSSSNEDEKDSFCSNFLQFEIPE 329

Query: 197 GLDFADFV 205
           GLDFADFV
Sbjct: 330 GLDFADFV 337

[Close]

BLAST of CsGy7G003850 vs. TrEMBL
Match: tr|A0A1S3C0Q7|A0A1S3C0Q7_CUCME (transcription factor MYB39 OS=Cucumis melo OX=3656 GN=LOC103495548 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 1.1e-80
Identity = 175/187 (93.58%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 18  LSTLLNNHQTTATLNPESLRLIPTLLGLKQQDPNAHNLLLQXXXXXXXXXXXXXLSQLLQ 77
           LSTLLNNHQTT TLNPESLRLI TLL LKQ+D NAHNLLLQXXXXXXXXXXXXXLSQLLQ
Sbjct: 151 LSTLLNNHQTTTTLNPESLRLISTLLSLKQEDQNAHNLLLQXXXXXXXXXXXXXLSQLLQ 210

Query: 78  PNDNVNNTNSSSIMPISSTFVDCPNTSQENLNFLPTLLNCGEDVLMNQPNYIYGGNGSNP 137
           PNDNVNNTNSSS+MPISSTFVDC NTSQENLNFLPT LNCGEDVLMNQ NY+YGG+GSNP
Sbjct: 211 PNDNVNNTNSSSVMPISSTFVDCSNTSQENLNFLPTNLNCGEDVLMNQHNYMYGGDGSNP 270

Query: 138 TASEILDISNNNAQNLGFDSVKSSPTPLNSSSTYLNNSSSNEDEKDSFCSNFLQFEIPEG 197
           TASEILDISNNNAQ LGFDSVKSSPTPLNSSSTYLNNSSSNEDEKDSFCSNFLQFEIPEG
Sbjct: 271 TASEILDISNNNAQTLGFDSVKSSPTPLNSSSTYLNNSSSNEDEKDSFCSNFLQFEIPEG 330

Query: 198 LDFADFV 205
           LDFADFV
Sbjct: 331 LDFADFV 337

[Close]

BLAST of CsGy7G003850 vs. TrEMBL
Match: tr|A0A2N9GME6|A0A2N9GME6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28627 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 1.2e-13
Identity = 78/197 (39.59%), Postives = 100/197 (50.76%), Query Frame = 0


Query: 27  TTATLNPESLRLIPTLLGLKQ----------QDPNAHNLLLQXXXXXXXXXXXXXLSQLL 86
           T A +NPE LRL  T+L LKQ          Q+    NLLLQ               Q  
Sbjct: 157 TQALVNPELLRLATTILSLKQESQIPFPQNLQENQLCNLLLQNQVQPIQPNQYQAPIQQG 216

Query: 87  QPNDNVNNTNSSSIMPISSTFVDCPNTSQENLNFLPTLLNCGEDVLMNQPNYIYGGNGSN 146
             ++  N    +++    S  V   + SQEN        N  ED +  QPNY+Y   GSN
Sbjct: 217 FSSEETNQLMQANVEGFLSK-VSTFDNSQEN----SIASNLNEDFVC-QPNYLY--CGSN 276

Query: 147 PTASEILDIS-----NNNAQNLGFDSV----KSSPTPLNSSSTYLNNSSSNEDEKDSFCS 205
           PT  ++ + S     N++ Q   FDSV    KSSPTPLNS  T++N  SS EDE+DS CS
Sbjct: 277 PTVPDLPESSNFQSLNDSNQYFCFDSVVSTPKSSPTPLNSPPTFIN--SSTEDERDSHCS 336

[Close]

BLAST of CsGy7G003850 vs. TrEMBL
Match: tr|A0A2I4HMJ1|A0A2I4HMJ1_9ROSI (myb-related protein 308-like OS=Juglans regia OX=51240 GN=LOC109019528 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 1.7e-12
Identity = 72/198 (36.36%), Postives = 100/198 (50.51%), Query Frame = 0


Query: 27  TTATLNPESLRLIPTLLGLKQQDPNAHNLLLQXXXXXXXXXXXXXLSQLLQPNDNVNNT- 86
           T   +NP+ L+L   ++ LKQ++       LQ                +LQPND      
Sbjct: 157 TQTLMNPDLLKLATAIISLKQENQVPFTKTLQENNLFNYLMQKQVQPVVLQPNDQYQTPL 216

Query: 87  ----NSSSIMPISSTFVD--CPNTS---QENLNFLPTLLNCGEDVLMNQPNYIYGGNGSN 146
               +S     +    V+  C N S       N +PT LN   + L+ QPNY+Y    SN
Sbjct: 217 QEGFSSEMTNQLMQANVEGCCSNVSTFGNSQENSIPTSLN---EELVCQPNYMY--CSSN 276

Query: 147 PTASEILDISN-----NNAQNLGFDSVK----SSPTPLNSSSTYLNNSSSNEDEKDSFCS 205
           PT  +I + SN     N+ QN  F+SV     SSPTPLNS ST++N  +  EDEK+S+CS
Sbjct: 277 PTVPDIPESSNFQSLYNSNQNFSFESVVSTPISSPTPLNSPSTFINGGA--EDEKESYCS 336

[Close]

BLAST of CsGy7G003850 vs. TrEMBL
Match: tr|A0A2P4L0P5|A0A2P4L0P5_QUESU (Isoform 2 of transcription factor myb39 OS=Quercus suber OX=58331 GN=CFP56_56135 PE=4 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.2e-12
Identity = 80/205 (39.02%), Postives = 99/205 (48.29%), Query Frame = 0


Query: 27  TTATLNPESLRLIPTLLGLKQ--QDPNAHNLLLQXXXXXXXXXXXXXLSQLLQPN----- 86
           T A +NPE LRL  T+L LKQ  Q P   NL                 +Q LQPN     
Sbjct: 157 TQALMNPELLRLATTILSLKQESQAPFPQNL----QENQLCNFLLQNQAQPLQPNQYQAP 216

Query: 87  ----------DNVNNTNSSSIMPISSTFVDCPNTSQENLNFLPTLLNCGEDVLMNQPNYI 146
                     + +   N    +   +TF      SQEN        N  ED +  QPNY+
Sbjct: 217 IQEGFSSEESNQLTQANVEGFLSKVATF----GNSQEN----SIASNLNEDFVC-QPNYM 276

Query: 147 YGGNGSNPTASEILD-----ISNNNAQNL-GFDSV----KSSPTPLNSSSTYLNNSSSNE 205
           Y   GSNP    +++       NN+ QN   FDSV    KSSPTPLNSSST++N  S  E
Sbjct: 277 Y--CGSNPIVPYLVENPNFQSLNNSYQNFSSFDSVVSTPKSSPTPLNSSSTFIN--SCTE 336

The following BLAST results are available for this feature:

BLAST of CsGy7G003850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137011.1	1.7e-88	99.47	PREDICTED: transcription repressor MYB6-like [Cucumis sativus] >KGN43573.1 hypot...	[more]
XP_008455362.1	1.7e-80	93.58	PREDICTED: transcription factor MYB39 [Cucumis melo]	[more]
XP_022969164.1	5.0e-53	71.35	transcription factor MYB41-like [Cucurbita maxima]	[more]
XP_022952800.1	3.3e-52	71.88	transcription factor MYB41 [Cucurbita moschata]	[more]
XP_023554539.1	4.4e-49	69.39	transcription factor MYB102-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy7G003850 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G21440.1	3.6e-05	43.86	MYB-like 102	[more]

BLAST of CsGy7G003850 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LDR8\|MY102_ARATH	6.6e-04	43.86	Transcription factor MYB102 OS=Arabidopsis thaliana OX=3702 GN=MYB102 PE=2 SV=1	[more]

BLAST of CsGy7G003850 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K293\|A0A0A0K293_CUCSA	1.1e-88	99.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G046120 PE=4 SV=1	[more]
tr\|A0A1S3C0Q7\|A0A1S3C0Q7_CUCME	1.1e-80	93.58	transcription factor MYB39 OS=Cucumis melo OX=3656 GN=LOC103495548 PE=4 SV=1	[more]
tr\|A0A2N9GME6\|A0A2N9GME6_FAGSY	1.2e-13	39.59	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28627 PE=4 SV=1	[more]
tr\|A0A2I4HMJ1\|A0A2I4HMJ1_9ROSI	1.7e-12	36.36	myb-related protein 308-like OS=Juglans regia OX=51240 GN=LOC109019528 PE=4 SV=1	[more]
tr\|A0A2P4L0P5\|A0A2P4L0P5_QUESU	2.2e-12	39.02	Isoform 2 of transcription factor myb39 OS=Quercus suber OX=58331 GN=CFP56_56135...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G003850.1	CsGy7G003850.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 154..180

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy7G003850	Cla007719	Watermelon (97103) v1	cgybwmB558
CsGy7G003850	Csa7G046120	Cucumber (Chinese Long) v2	cgybcuB324
CsGy7G003850	MELO3C018773	Melon (DHL92) v3.5.1	cgybmeB468
CsGy7G003850	ClCG02G001380	Watermelon (Charleston Gray)	cgybwcgB506
CsGy7G003850	CSPI07G04220	Wild cucumber (PI 183967)	cgybcpiB332
CsGy7G003850	CmaCh19G009580	Cucurbita maxima (Rimu)	cgybcmaB944
CsGy7G003850	CmoCh19G009880	Cucurbita moschata (Rifu)	cgybcmoB927
CsGy7G003850	Lsi11G015080	Bottle gourd (USVL1VR-Ls)	cgyblsiB462
CsGy7G003850	Cp4.1LG04g03280	Cucurbita pepo (Zucchini)	cgybcpeB964
CsGy7G003850	Cp4.1LG15g07840	Cucurbita pepo (Zucchini)	cgybcpeB910
CsGy7G003850	MELO3C018773.2	Melon (DHL92) v3.6.1	cgybmedB465
CsGy7G003850	CsaV3_7G004070	Cucumber (Chinese Long) v3	cgybcucB348
CsGy7G003850	Cla97C02G027830	Watermelon (97103) v2	cgybwmbB502
CsGy7G003850	Carg19097	Silver-seed gourd	carcgybB0717
CsGy7G003850	Carg19209	Silver-seed gourd	carcgybB0864

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy7G003850	Bottle gourd (USVL1VR-Ls)	cgyblsiB457
CsGy7G003850	Cucumber (Gy14) v2	cgybcgybB153
CsGy7G003850	Cucurbita maxima (Rimu)	cgybcmaB896
CsGy7G003850	Cucurbita maxima (Rimu)	cgybcmaB909
CsGy7G003850	Cucurbita maxima (Rimu)	cgybcmaB960
CsGy7G003850	Cucurbita moschata (Rifu)	cgybcmoB877
CsGy7G003850	Cucurbita moschata (Rifu)	cgybcmoB892
CsGy7G003850	Cucurbita moschata (Rifu)	cgybcmoB943
CsGy7G003850	Cucurbita pepo (Zucchini)	cgybcpeB973
CsGy7G003850	Watermelon (Charleston Gray)	cgybwcgB497
CsGy7G003850	Wild cucumber (PI 183967)	cgybcpiB299
CsGy7G003850	Silver-seed gourd	carcgybB0032
CsGy7G003850	Silver-seed gourd	carcgybB0641
CsGy7G003850	Cucumber (Chinese Long) v3	cgybcucB311
CsGy7G003850	Wax gourd	cgybwgoB633
CsGy7G003850	Wax gourd	cgybwgoB655