Cp4.1LG03g06940 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g06940
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionDSR6
LocationCp4.1LG03 : 3695621 .. 3698572 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CATTGCCCCACAAGCTAATGCAACCTTCTCCTTTCATGCCCAAATCCTCTCTCTCTCTCTGATAGTGATTGGTCTTTCAATCTCTCTTTCCATTACAACACTTCCACTACCCAAACCGTCCTCTTCTCTCCTCTTCCCACTTCTCTCTCTAAAACCCCATTTTCATTTCTTCATTTCCAATCCCTGATGATCACGCAGCCATCAATTTAAGCCAAGAACAGAGCAAAATCATCAATGGGTTCCTGTGTTTCAATCCATAGAAACTCCGATTCCGCCGTGAAATTCCGACTCTCAAATGGTTCTAAACCCAACGGTTTGCCAATTCCTCCTTCCCCGATCAAAGACAACGACACTCCGATCATCGGAAACCCTCCCATTCACGGTGGCGTCTTCGTCAAATCTCAGAGCTCTCCTTCTCACTTCGGTACTCATCCGTTTCTTCTTCTTCTTGACTTTGTGCAAGTTTAATCGGCTTTGTTTTCTTCTTTTTGTTTCGTTTCTCTGAATTATTTCTTGCTGATTTGTTTTAGTTGAGTGATGAACTTTGCGATCTAAAGTGTTTGCTTCTTGCGTGTCCCTGATTTGACTTTGATTGCTTTCACATGATCTAACCTTGTTTTCTTTTTCTAATTCATTATCCTATAGGATCATTGTTTAATTGGAATGATAAAGTTAATCTAGGTCCCATTTGTTTTATTTTTTTATAAAAATTGAGATATCGATCTCTTTTCCAATGTAAATCCCCAGTGATTGATGAACAGGAGAAGGATTTTCCCCTTTCTTTTCGAATAATTATTCATTAAACTTAAGAGAAACCCCAGATTTCTTAGAATTGGCACAGTTCTATCTATATATTGTTATCAGTGGATTGATGGGTGTTTCTTATAATTTGTTGCATACCAGAGTTCTCTTTTGATAAGAACATTGTCATGAGTTTCTATCCATCTCACATGAAGCATGCCAGAGTTCATGGAAAGTGAGGAATGCGTACTCAACATCTTAAGTCCTTATCAGCAGGGCCACCTCTTCGGGGCTAATTGATAGCTATTACTAAGCTGCCAGTCTATTACAAGTTTAGCTTAGCCTTTCCTGTTTGGTTCATTTTGAAGAATCATTTGTTCTTGTATGATCATTTGTTCTTAGAATTGCATAGATGAAGCACTTTCTGTTCTTGGACTACTTTCACAAGGTTGCTGTTCTTCACTTATCTATGTTTGGAGTTCCATTTTTAGTGAGTCTTTGTTGCTTTATGTAACCGTCCGAGCCCATCGCTAGTGGATATTATGTAACGGTCTAAGCTCACTGCAAACCGATATTGTTCTCTTTGGGATTTCCCTTTCGGGTTTCCCCTCAATGTTTTTAAAACGCGTATGCTCGGGAGAGGTTGCCACACTTTTATAAAAAGTGTTTTGTTCTCCTCCCCATGTGGGATCTCATAATCCATCCAAAGAGGACAATATCTGCTAGCAGTGGGCTTGGACTATTACATATTGTACGCTTTGACCCGTTACATATTGCTGTCAGCCTCATGGTTTTAAAGCGTGTCTATTAGGGAAAGTTTTTCATACCAAGGAATGCTTCGTTCTCCTCTCCAACCGATGTGGGATCTCACAATCTACCCCCTTGGAGGCCAGCGTCCTTGCTGGCACACCTCCCAGTGTCTGGCTTTGATACCATTTGTAACAGCCCAAGCCCACTATTACCATATATTGTCTGCTTTGGCCAATTGTGAGATCCCACATCAGTTGGAGAGGGGAACGAAGCATTCTTATAAGGGTGTGGAAACTTCTCCCTAGTAGACGCGTTTTAAAACCGTGAGGCTGACAACGATACGTAACGTGCCAAAGCAGACAATATCTACTAGCGGTGGGTTTGGGCTGTTACATGACTTTCATTCGCTGTATTAGAACACTTTCTTGCTTATATTGTCATGGTGAGTTCTTTCTTTTGTGTCCGTTCTTGAAAGAGTTCTTCACACTAGTCCTTGTGTTTATATATGTTTTGCTATCTATCTCGCCTACTTTTGTATGAACTCTGAAATGGCTGTTCTATGAACGAAGCAAGTTGATCATAGAACTTTAAACTGGTCTCATAGGTAGCAAAGATGAAGCGTTTTTCGATTCCCGAGGCTGGTTGGATTCGGATTGTGAAGATGATTTCTATAGTGTCAATGGTGGTAAGTAGTCATTAGAATTCTTTTATGCTGTTAGTCTCCTTACCTAATCAATTGCGATGGCTGCAGATTTCACCCCGTCACGAGGAAACACTCCGGTACGCACGAGCTTCTCCTCCGGTACTCCACGGATCAACCAAGTCCACGTCGTCGATGATCTAACTCCAATTGCCATGCCCAAACCATCACCAACAGGAAAGAAGAAACTGGCTGAACTTTTCAGGGATAGCTCAAGAAATGGCACTGACATACAAACCAAACCAACACTAAACGAACTCGCCCTGCAATCAAATCCCGAAACGCCTTATATGTCGGGAACAAACTCCGTATGCAGCAGCGAGAGGACCTCAAATGGAGGAGATGTCTGGATTGAAAAGGAGAAACGATTTGGATCTGCACAATGCTGCCTCCCAAGCTTGGGATCACGTCGTAGCTTCGGCGACCGGAGGAAGAAGGCAAGTCCTGCCATAGCTGTATAAACACAACGCTCGATCAAACACGCCACGAGCTGCAAATTCCCTCTGAATTTCTGCCATTGTGAGACCCCAAAGCTCATGGAGTAGCTCACAATTGTTCAGAAATGTGTAAAGTCCTGAAATATCATATACAGATATTGGTGTTGTTGAAGGCTGTGTCTATGTATAAACATGTCTTAGATTCTTAGTACATTCATATCAGAATATGTTAGAAATCAAAGAGGAGAGGAAGAAGATGAAGAAGAAGATGAAAGCAATGGGACTTTTTTGGGTTTTTCCTGAGAATTATAATAAACAACCTTT

mRNA sequence

CATTGCCCCACAAGCTAATGCAACCTTCTCCTTTCATGCCCAAATCCTCTCTCTCTCTCTGATAGTGATTGGTCTTTCAATCTCTCTTTCCATTACAACACTTCCACTACCCAAACCGTCCTCTTCTCTCCTCTTCCCACTTCTCTCTCTAAAACCCCATTTTCATTTCTTCATTTCCAATCCCTGATGATCACGCAGCCATCAATTTAAGCCAAGAACAGAGCAAAATCATCAATGGGTTCCTGTGTTTCAATCCATAGAAACTCCGATTCCGCCGTGAAATTCCGACTCTCAAATGGTTCTAAACCCAACGGTTTGCCAATTCCTCCTTCCCCGATCAAAGACAACGACACTCCGATCATCGGAAACCCTCCCATTCACGGTGGCGTCTTCGTCAAATCTCAGAGCTCTCCTTCTCACTTCGGTAGCAAAGATGAAGCGTTTTTCGATTCCCGAGGCTGGTTGGATTCGGATTGTGAAGATGATTTCTATAGTGTCAATGGTGATTTCACCCCGTCACGAGGAAACACTCCGGTACGCACGAGCTTCTCCTCCGGTACTCCACGGATCAACCAAGTCCACGTCGTCGATGATCTAACTCCAATTGCCATGCCCAAACCATCACCAACAGGAAAGAAGAAACTGGCTGAACTTTTCAGGGATAGCTCAAGAAATGGCACTGACATACAAACCAAACCAACACTAAACGAACTCGCCCTGCAATCAAATCCCGAAACGCCTTATATGTCGGGAACAAACTCCGTATGCAGCAGCGAGAGGACCTCAAATGGAGGAGATGTCTGGATTGAAAAGGAGAAACGATTTGGATCTGCACAATGCTGCCTCCCAAGCTTGGGATCACGTCGTAGCTTCGGCGACCGGAGGAAGAAGGCAAGTCCTGCCATAGCTGTATAAACACAACGCTCGATCAAACACGCCACGAGCTGCAAATTCCCTCTGAATTTCTGCCATTGTGAGACCCCAAAGCTCATGGAGTAGCTCACAATTGTTCAGAAATGTGTAAAGTCCTGAAATATCATATACAGATATTGGTGTTGTTGAAGGCTGTGTCTATGTATAAACATGTCTTAGATTCTTAGTACATTCATATCAGAATATGTTAGAAATCAAAGAGGAGAGGAAGAAGATGAAGAAGAAGATGAAAGCAATGGGACTTTTTTGGGTTTTTCCTGAGAATTATAATAAACAACCTTT

Coding sequence (CDS)

ATGGGTTCCTGTGTTTCAATCCATAGAAACTCCGATTCCGCCGTGAAATTCCGACTCTCAAATGGTTCTAAACCCAACGGTTTGCCAATTCCTCCTTCCCCGATCAAAGACAACGACACTCCGATCATCGGAAACCCTCCCATTCACGGTGGCGTCTTCGTCAAATCTCAGAGCTCTCCTTCTCACTTCGGTAGCAAAGATGAAGCGTTTTTCGATTCCCGAGGCTGGTTGGATTCGGATTGTGAAGATGATTTCTATAGTGTCAATGGTGATTTCACCCCGTCACGAGGAAACACTCCGGTACGCACGAGCTTCTCCTCCGGTACTCCACGGATCAACCAAGTCCACGTCGTCGATGATCTAACTCCAATTGCCATGCCCAAACCATCACCAACAGGAAAGAAGAAACTGGCTGAACTTTTCAGGGATAGCTCAAGAAATGGCACTGACATACAAACCAAACCAACACTAAACGAACTCGCCCTGCAATCAAATCCCGAAACGCCTTATATGTCGGGAACAAACTCCGTATGCAGCAGCGAGAGGACCTCAAATGGAGGAGATGTCTGGATTGAAAAGGAGAAACGATTTGGATCTGCACAATGCTGCCTCCCAAGCTTGGGATCACGTCGTAGCTTCGGCGACCGGAGGAAGAAGGCAAGTCCTGCCATAGCTGTATAA

Protein sequence

MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSPSHFGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRINQVHVVDDLTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSSERTSNGGDVWIEKEKRFGSAQCCLPSLGSRRSFGDRRKKASPAIAV
Homology
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BLAST of Cp4.1LG03g06940 vs. Swiss-Prot
Match: Y3721_ARATH (Uncharacterized protein At3g27210 OS=Arabidopsis thaliana GN=Y-2 PE=1 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 3.4e-22
Identity = 82/178 (46.07%), Postives = 97/178 (54.49%), Query Frame = 1 

Query: 58  SSPSHFGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRINQV-- 117
           SS   FGSKDE FFDS+ WL SD +DDF+SVNGDFTPS GNTP ++SFS   PR + +  
Sbjct: 73  SSKKSFGSKDETFFDSQPWLQSDSDDDFHSVNGDFTPSLGNTP-KSSFSDRPPRFHNLIF 132

Query: 118 HVVDDLTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTN 177
           H        + P P P  +KKL ELFRDS R   +        E    S   TPY+SG N
Sbjct: 133 HEKKPSRGSSSPAPLPR-RKKLGELFRDSIREERE--------ESGSSSAISTPYLSGAN 192

Query: 178 SVCSSERTSNGGDVWIEKEKRFGS---AQCCLPSLGS-RRSFGDRRKKAS---PAIAV 227
           S     R  N  D  IEKE++  S      CLP   S   SF +RRKK S   P +AV
Sbjct: 193 S-----REFN--DTAIEKEEKKKSNWHHHRCLPGFSSCGGSFMERRKKMSSETPVVAV 233

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BLAST of Cp4.1LG03g06940 vs. TrEMBL
Match: A0A0A0LB55_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G588480 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 1.2e-95
Identity = 182/226 (80.53%), Postives = 196/226 (86.73%), Query Frame = 1 

Query: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60
           MGSC SIHRN DSA+KF+LS  SK   + IPPSPIK N+TPI  NP     VF+KSQ+SP
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPI--NPT----VFLKSQTSP 60

Query: 61  SHFGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRINQVHVVDD 120
           SH GSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPV +SFSSGTPRINQVH +DD
Sbjct: 61  SHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDD 120

Query: 121 LTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS 180
            TPI +P+PSPTGKK+LAELFR+SSRNGTD Q KPTLNELALQSNPETPY+SGTNSVCSS
Sbjct: 121 QTPITIPEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSS 180

Query: 181 ERTSNGGDVWIEKEKRFGSAQCCLPSLGSRRSFGDRRKKASPAIAV 227
           ERT N GDVW EKE+ FGS QCCLPSLGS  SFGDRRKKASPAIAV
Sbjct: 181 ERTPN-GDVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219

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BLAST of Cp4.1LG03g06940 vs. TrEMBL
Match: B9RBK4_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1677780 PE=4 SV=1)

HSP 1 Score: 218.8 bits (556), Expect = 6.9e-54
Identity = 130/244 (53.28%), Postives = 162/244 (66.39%), Query Frame = 1 

Query: 1   MGSCVSIHRNS-DSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSS 60
           MGSC S+H+ + +SA+K  +S GSK + L IP SPIKD    +  + PI        ++ 
Sbjct: 1   MGSCASVHKGTPESAMKLGVSFGSKKDNLVIPESPIKDKH--VNDHTPI--------KTF 60

Query: 61  PSHFGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRINQVHVVD 120
             H GSKDE FFDSR WLDSDCEDDF+SVNGDFTPSRGNTPV  +FS GTP+IN+  +  
Sbjct: 61  DDH-GSKDETFFDSRAWLDSDCEDDFFSVNGDFTPSRGNTPVHHNFSMGTPKINKTTLEG 120

Query: 121 -DLTPIAMPKPSPTGKKKLAELFRDSSRNGTD----------------IQTKPTLNELAL 180
              TP ++P+PSPTGKK+L+ELFR+S R   +                 + K T+ ++  
Sbjct: 121 RPPTPGSIPEPSPTGKKRLSELFRESLREEQEADKLDSSRMQNIGNGKTEVKQTILDVLP 180

Query: 181 QSNPETPYMSGTNSVCSSERTSNGGDVWIEKEKRFGSAQCCLPSLGSRRSFGDRRKKASP 227
           +S   TPY+SG NSVCSSERT+N GD  IE+EK   SAQCCLPSL S RSF DR+KK SP
Sbjct: 181 KSASGTPYISGANSVCSSERTAN-GDALIEREKSIKSAQCCLPSLISCRSFSDRKKKMSP 232

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BLAST of Cp4.1LG03g06940 vs. TrEMBL
Match: A0A067LN94_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10140 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 4.9e-52
Identity = 126/243 (51.85%), Postives = 161/243 (66.26%), Query Frame = 1 

Query: 1   MGSCVSIHRN-SDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSS 60
           MGSCVS+H+  S+SAVK  LS GSK +   IP SPIKD    + G+ P           +
Sbjct: 1   MGSCVSVHKGTSESAVKLGLSFGSKKDNHVIPESPIKDKQ--VNGDYP--------QIKT 60

Query: 61  PSHFGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRINQVHVVD 120
              +GSKDE FFDS+ WLDSDC+DDF SVNG+FTPSRG+TPV  SF+ GTP+IN+ + ++
Sbjct: 61  FEDYGSKDEVFFDSQPWLDSDCDDDFLSVNGEFTPSRGSTPVHHSFAMGTPKINKTN-LE 120

Query: 121 DLTPIAMPKPSPTGKKKLAELFRDSSR----------------NGTDIQTKPTLNELALQ 180
           D +P + P+PSPT KKKL+ELFR+S R                N   I+ K T+ ++  +
Sbjct: 121 DRSPASKPEPSPTVKKKLSELFRESRREEPDTDDQQTSDNQNINNGKIEVKQTILDVLPK 180

Query: 181 SNPETPYMSGTNSVCSSERTSNGGDVWIEKEKRFGSAQCCLPSLGSRRSFGDRRKKASPA 227
           S   TPY+SG NSVCSSERT+NG  ++ +KEK   SAQCCLPSL S  SF +R+KK SPA
Sbjct: 181 SASGTPYVSGPNSVCSSERTANGEPLF-QKEKSIKSAQCCLPSLLSCHSFSERKKKMSPA 231

[Close]
BLAST of Cp4.1LG03g06940 vs. TrEMBL
Match: A0A061ECX1_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_017164 PE=4 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 4.2e-51
Identity = 126/245 (51.43%), Postives = 161/245 (65.71%), Query Frame = 1 

Query: 1   MGSCVSIHRNS-DSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSS 60
           MGSCVS+H++S +SA+K  LS GSK + L IPPSP+K+              + V+S S+
Sbjct: 1   MGSCVSVHKSSQESAMKLGLSFGSKTDKLIIPPSPVKEKPA-----ANCDFALNVQSPST 60

Query: 61  PSHFGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRINQVHVVD 120
               GSKDE FFDSR WLDSDCEDDF+SVNGDFTPSRGNTPV  SF+ GTP++ +    +
Sbjct: 61  LKDLGSKDETFFDSRAWLDSDCEDDFFSVNGDFTPSRGNTPVHHSFAMGTPQVKK--GTE 120

Query: 121 DLTPIAMPKPSPTG-KKKLAELFRDSSRNGTD----------------IQTKPTLNELAL 180
           + +P ++ + SPTG KKKL ELFR+S R   D                I+ KPT+ +L  
Sbjct: 121 EGSPGSVSETSPTGKKKKLVELFRESIREDQDVNELNTPRNQDLANGKIEAKPTIQDLLP 180

Query: 181 QSNPE-TPYMSGTNSVCSSERTSNGGDVWIEKEKRFGSAQCCLPSLGSRRSFGDRRKKAS 227
             + + TPY+SG NS+C+SERT+N GD  I KEK F S QCCLPSL S +SF +R+KK S
Sbjct: 181 PKSADGTPYVSGANSLCTSERTAN-GDNPIFKEKPFKSVQCCLPSLVSCKSFSERKKKMS 237

[Close]
BLAST of Cp4.1LG03g06940 vs. TrEMBL
Match: F6I5J9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0171g00120 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.5e-50
Identity = 131/250 (52.40%), Postives = 158/250 (63.20%), Query Frame = 1 

Query: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60
           MGSCVS+HRN  SA+K ++S GSK + L IP SPIKD+  P I  PPI GG+  K+Q SP
Sbjct: 1   MGSCVSVHRNPHSAMKLKVSFGSKADKLVIP-SPIKDH--PSIAEPPI-GGLSHKAQWSP 60

Query: 61  SH-------FGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRIN 120
           S        FGSK+E FFDS+ WL+SD  DDF+SVNGDFTPSRGNTPV  + S GTP  N
Sbjct: 61  SQPITPFRDFGSKEEIFFDSQPWLESD-SDDFHSVNGDFTPSRGNTPVHPNVSIGTPHAN 120

Query: 121 QVHVVDDLTPIAMPKPSPTG-KKKLAELFRDSSRNGTD----------------IQTKPT 180
           +    ++  P ++P PSPTG KKKLAELF +S RN  D                ++ K T
Sbjct: 121 KAPF-ENRVPASIPTPSPTGRKKKLAELFEESIRNDMDGNDENILGKQNMSNGKMEVKRT 180

Query: 181 LNELALQSNPETPYMSGTNSVCSSERTSNGGDVWIEKEKRFGSAQCCLPSLGSRRSFGDR 227
           + +   +S   TP  SG NSVCS  RT NG D   EKEK   S QCCLPSL   RSF +R
Sbjct: 181 ILDFPPESANGTPLASGPNSVCSGGRTPNG-DFKSEKEKPLRSTQCCLPSLRLNRSFNER 240

[Close]
BLAST of Cp4.1LG03g06940 vs. TAIR10
Match: AT3G27210.1 (AT3G27210.1 unknown protein)

HSP 1 Score: 106.7 bits (265), Expect = 1.9e-23
Identity = 82/178 (46.07%), Postives = 97/178 (54.49%), Query Frame = 1 

Query: 58  SSPSHFGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRINQV-- 117
           SS   FGSKDE FFDS+ WL SD +DDF+SVNGDFTPS GNTP ++SFS   PR + +  
Sbjct: 73  SSKKSFGSKDETFFDSQPWLQSDSDDDFHSVNGDFTPSLGNTP-KSSFSDRPPRFHNLIF 132

Query: 118 HVVDDLTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTN 177
           H        + P P P  +KKL ELFRDS R   +        E    S   TPY+SG N
Sbjct: 133 HEKKPSRGSSSPAPLPR-RKKLGELFRDSIREERE--------ESGSSSAISTPYLSGAN 192

Query: 178 SVCSSERTSNGGDVWIEKEKRFGS---AQCCLPSLGS-RRSFGDRRKKAS---PAIAV 227
           S     R  N  D  IEKE++  S      CLP   S   SF +RRKK S   P +AV
Sbjct: 193 S-----REFN--DTAIEKEEKKKSNWHHHRCLPGFSSCGGSFMERRKKMSSETPVVAV 233

[Close]
BLAST of Cp4.1LG03g06940 vs. TAIR10
Match: AT3G01860.1 (AT3G01860.1 unknown protein)

HSP 1 Score: 96.3 bits (238), Expect = 2.6e-20
Identity = 84/235 (35.74%), Postives = 109/235 (46.38%), Query Frame = 1 

Query: 1   MGSCVSIHRN-----SDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVK 60
           MGSCVS  ++     SDS VK   S  SKP+  P   + +    + I GNPPI  G +  
Sbjct: 1   MGSCVSSSQSKSSSASDSVVKLA-SFISKPDSTPPLKTDVMITSSTINGNPPIDSGRWDS 60

Query: 61  SQSSPSHFGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRINQV 120
                     +D  FFDSRGWLDSDC+DDF SV G+FTPSRG TPV   F   TP   + 
Sbjct: 61  GNK-------EDMIFFDSRGWLDSDCDDDFMSVGGEFTPSRGTTPVHHKFCDQTPHQGEE 120

Query: 121 HVVDDLTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELA----------LQSN 180
           +   +    A P  +   KK+L ELF+++     + +        A            S 
Sbjct: 121 NKHGEEEEEASPTDN---KKRLLELFKETQDEEDEEEEDYVAEGKARACLWIRTPVRSSA 180

Query: 181 PETPYMSGTNSVCSSERTSNGGDVWIEKEKRFGSAQC--CLPSLGSRRSFGDRRK 219
           P TPY +      + ER         +K KR  SA    C+P L S  SF DRR+
Sbjct: 181 PATPYNN------NKERQ--------QKFKRVRSAALGRCVPRLVSCSSFTDRRR 210

[Close]
BLAST of Cp4.1LG03g06940 vs. TAIR10
Match: AT5G40860.1 (AT5G40860.1 unknown protein)

HSP 1 Score: 88.2 bits (217), Expect = 7.1e-18
Identity = 75/214 (35.05%), Postives = 99/214 (46.26%), Query Frame = 1 

Query: 25  PNGLPIPPSPIKDNDTPIIGNPPIHGGVF--VKSQ----SSPSHFGS-KDEAFFDSRGWL 84
           P+   I  SP+K+N  P+     +  G+   VKS+    SS   FGS KDE +FDS  W 
Sbjct: 42  PSTKKISESPVKENLAPVATPKTVDNGLSAQVKSRWSFSSSKRSFGSSKDETYFDSHQWQ 101

Query: 85  DSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRINQVHVVDDLTPIAMPKPSPTGKKKL 144
            SD EDDFYSV GDFTPS GNTP R S S   PRI+      +   ++        +KKL
Sbjct: 102 QSDSEDDFYSVRGDFTPSVGNTP-RCSISEKLPRIHSPLFEGEKPRVSFSHSPAPRRKKL 161

Query: 145 AELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSSERTSNGGDVWIEKEKRF 204
            ELFRDS R             + L+ + E        S C +       +  ++++K  
Sbjct: 162 GELFRDSIREE---------RAVILEESSEYQSEKSKKSSCDNSGELKVIEESVKEKKNL 221

Query: 205 GSA----QCCLPSLGS-RRSFGDRRKKASPAIAV 227
            S       CLP   S + S  D+RKK    I V
Sbjct: 222 KSPLNYHHRCLPRFSSFKGSLMDKRKKKKKKIHV 245

[Close]
BLAST of Cp4.1LG03g06940 vs. NCBI nr
Match: gi|778681695|ref|XP_011651566.1| (PREDICTED: uncharacterized protein At3g27210-like [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 1.8e-95
Identity = 182/226 (80.53%), Postives = 196/226 (86.73%), Query Frame = 1 

Query: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60
           MGSC SIHRN DSA+KF+LS  SK   + IPPSPIK N+TPI  NP     VF+KSQ+SP
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPI--NPT----VFLKSQTSP 60

Query: 61  SHFGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRINQVHVVDD 120
           SH GSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPV +SFSSGTPRINQVH +DD
Sbjct: 61  SHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDD 120

Query: 121 LTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS 180
            TPI +P+PSPTGKK+LAELFR+SSRNGTD Q KPTLNELALQSNPETPY+SGTNSVCSS
Sbjct: 121 QTPITIPEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSS 180

Query: 181 ERTSNGGDVWIEKEKRFGSAQCCLPSLGSRRSFGDRRKKASPAIAV 227
           ERT N GDVW EKE+ FGS QCCLPSLGS  SFGDRRKKASPAIAV
Sbjct: 181 ERTPN-GDVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219

[Close]
BLAST of Cp4.1LG03g06940 vs. NCBI nr
Match: gi|659098331|ref|XP_008450086.1| (PREDICTED: uncharacterized protein At3g27210-like [Cucumis melo])

HSP 1 Score: 354.8 bits (909), Expect = 1.1e-94
Identity = 181/226 (80.09%), Postives = 194/226 (85.84%), Query Frame = 1 

Query: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60
           MGSC SIHRN DSA+KF+LS  SK N + IPPSPIK N+TPI  NP     VF KSQ+SP
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTNDMAIPPSPIKQNNTPI--NPT----VFHKSQTSP 60

Query: 61  SHFGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRINQVHVVDD 120
           SH GSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTP  +SFSSGTPRINQVH +DD
Sbjct: 61  SHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPTHSSFSSGTPRINQVHGIDD 120

Query: 121 LTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS 180
            TPI +P+PSPTGKKKLA+LFR+SSRNGTD Q KPTLNELALQSNPETPY+SGTNSVCSS
Sbjct: 121 QTPITIPEPSPTGKKKLADLFRESSRNGTDRQAKPTLNELALQSNPETPYVSGTNSVCSS 180

Query: 181 ERTSNGGDVWIEKEKRFGSAQCCLPSLGSRRSFGDRRKKASPAIAV 227
           ERT N GDVW EKE+ FGS QCCLPSL S  SFGDRRKKASPAIAV
Sbjct: 181 ERTPN-GDVWAEKERPFGSVQCCLPSLRSCHSFGDRRKKASPAIAV 219

[Close]
BLAST of Cp4.1LG03g06940 vs. NCBI nr
Match: gi|255536943|ref|XP_002509538.1| (PREDICTED: uncharacterized protein At3g27210 [Ricinus communis])

HSP 1 Score: 218.8 bits (556), Expect = 9.8e-54
Identity = 130/244 (53.28%), Postives = 162/244 (66.39%), Query Frame = 1 

Query: 1   MGSCVSIHRNS-DSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSS 60
           MGSC S+H+ + +SA+K  +S GSK + L IP SPIKD    +  + PI        ++ 
Sbjct: 1   MGSCASVHKGTPESAMKLGVSFGSKKDNLVIPESPIKDKH--VNDHTPI--------KTF 60

Query: 61  PSHFGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRINQVHVVD 120
             H GSKDE FFDSR WLDSDCEDDF+SVNGDFTPSRGNTPV  +FS GTP+IN+  +  
Sbjct: 61  DDH-GSKDETFFDSRAWLDSDCEDDFFSVNGDFTPSRGNTPVHHNFSMGTPKINKTTLEG 120

Query: 121 -DLTPIAMPKPSPTGKKKLAELFRDSSRNGTD----------------IQTKPTLNELAL 180
              TP ++P+PSPTGKK+L+ELFR+S R   +                 + K T+ ++  
Sbjct: 121 RPPTPGSIPEPSPTGKKRLSELFRESLREEQEADKLDSSRMQNIGNGKTEVKQTILDVLP 180

Query: 181 QSNPETPYMSGTNSVCSSERTSNGGDVWIEKEKRFGSAQCCLPSLGSRRSFGDRRKKASP 227
           +S   TPY+SG NSVCSSERT+N GD  IE+EK   SAQCCLPSL S RSF DR+KK SP
Sbjct: 181 KSASGTPYISGANSVCSSERTAN-GDALIEREKSIKSAQCCLPSLISCRSFSDRKKKMSP 232

[Close]
BLAST of Cp4.1LG03g06940 vs. NCBI nr
Match: gi|802539352|ref|XP_012070605.1| (PREDICTED: uncharacterized protein At3g27210 [Jatropha curcas])

HSP 1 Score: 212.6 bits (540), Expect = 7.1e-52
Identity = 126/243 (51.85%), Postives = 161/243 (66.26%), Query Frame = 1 

Query: 1   MGSCVSIHRN-SDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSS 60
           MGSCVS+H+  S+SAVK  LS GSK +   IP SPIKD    + G+ P           +
Sbjct: 1   MGSCVSVHKGTSESAVKLGLSFGSKKDNHVIPESPIKDKQ--VNGDYP--------QIKT 60

Query: 61  PSHFGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRINQVHVVD 120
              +GSKDE FFDS+ WLDSDC+DDF SVNG+FTPSRG+TPV  SF+ GTP+IN+ + ++
Sbjct: 61  FEDYGSKDEVFFDSQPWLDSDCDDDFLSVNGEFTPSRGSTPVHHSFAMGTPKINKTN-LE 120

Query: 121 DLTPIAMPKPSPTGKKKLAELFRDSSR----------------NGTDIQTKPTLNELALQ 180
           D +P + P+PSPT KKKL+ELFR+S R                N   I+ K T+ ++  +
Sbjct: 121 DRSPASKPEPSPTVKKKLSELFRESRREEPDTDDQQTSDNQNINNGKIEVKQTILDVLPK 180

Query: 181 SNPETPYMSGTNSVCSSERTSNGGDVWIEKEKRFGSAQCCLPSLGSRRSFGDRRKKASPA 227
           S   TPY+SG NSVCSSERT+NG  ++ +KEK   SAQCCLPSL S  SF +R+KK SPA
Sbjct: 181 SASGTPYVSGPNSVCSSERTANGEPLF-QKEKSIKSAQCCLPSLLSCHSFSERKKKMSPA 231

[Close]
BLAST of Cp4.1LG03g06940 vs. NCBI nr
Match: gi|590647198|ref|XP_007031835.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 209.5 bits (532), Expect = 6.0e-51
Identity = 126/245 (51.43%), Postives = 161/245 (65.71%), Query Frame = 1 

Query: 1   MGSCVSIHRNS-DSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSS 60
           MGSCVS+H++S +SA+K  LS GSK + L IPPSP+K+              + V+S S+
Sbjct: 1   MGSCVSVHKSSQESAMKLGLSFGSKTDKLIIPPSPVKEKPA-----ANCDFALNVQSPST 60

Query: 61  PSHFGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRINQVHVVD 120
               GSKDE FFDSR WLDSDCEDDF+SVNGDFTPSRGNTPV  SF+ GTP++ +    +
Sbjct: 61  LKDLGSKDETFFDSRAWLDSDCEDDFFSVNGDFTPSRGNTPVHHSFAMGTPQVKK--GTE 120

Query: 121 DLTPIAMPKPSPTG-KKKLAELFRDSSRNGTD----------------IQTKPTLNELAL 180
           + +P ++ + SPTG KKKL ELFR+S R   D                I+ KPT+ +L  
Sbjct: 121 EGSPGSVSETSPTGKKKKLVELFRESIREDQDVNELNTPRNQDLANGKIEAKPTIQDLLP 180

Query: 181 QSNPE-TPYMSGTNSVCSSERTSNGGDVWIEKEKRFGSAQCCLPSLGSRRSFGDRRKKAS 227
             + + TPY+SG NS+C+SERT+N GD  I KEK F S QCCLPSL S +SF +R+KK S
Sbjct: 181 PKSADGTPYVSGANSLCTSERTAN-GDNPIFKEKPFKSVQCCLPSLVSCKSFSERKKKMS 237

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g06940 vs. Swiss-Prot
Match NameE-valueIdentityDescription
Y3721_ARATH3.4e-2246.07Uncharacterized protein At3g27210 OS=Arabidopsis thaliana GN=Y-2 PE=1 SV=1[more]
BLAST of Cp4.1LG03g06940 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LB55_CUCSA1.2e-9580.53Uncharacterized protein OS=Cucumis sativus GN=Csa_3G588480 PE=4 SV=1[more]
B9RBK4_RICCO6.9e-5453.28Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1677780 PE=4 SV=1[more]
A0A067LN94_JATCU4.9e-5251.85Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10140 PE=4 SV=1[more]
A0A061ECX1_THECC4.2e-5151.43Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_017164 PE=4 SV=1[more]
F6I5J9_VITVI3.5e-5052.40Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0171g00120 PE=4 SV=... [more]
BLAST of Cp4.1LG03g06940 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G27210.11.9e-2346.07 unknown protein[more]
AT3G01860.12.6e-2035.74 unknown protein[more]
AT5G40860.17.1e-1835.05 unknown protein[more]
BLAST of Cp4.1LG03g06940 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778681695|ref|XP_011651566.1|1.8e-9580.53PREDICTED: uncharacterized protein At3g27210-like [Cucumis sativus][more]
gi|659098331|ref|XP_008450086.1|1.1e-9480.09PREDICTED: uncharacterized protein At3g27210-like [Cucumis melo][more]
gi|255536943|ref|XP_002509538.1|9.8e-5453.28PREDICTED: uncharacterized protein At3g27210 [Ricinus communis][more]
gi|802539352|ref|XP_012070605.1|7.1e-5251.85PREDICTED: uncharacterized protein At3g27210 [Jatropha curcas][more]
gi|590647198|ref|XP_007031835.1|6.0e-5151.43Uncharacterized protein isoform 1 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g06940.1Cp4.1LG03g06940.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34280FAMILY NOT NAMEDcoord: 2..226
score: 5.8
NoneNo IPR availablePANTHERPTHR34280:SF2SUBFAMILY NOT NAMEDcoord: 2..226
score: 5.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g06940Cucsa.054240Cucumber (Gy14) v1cgycpeB0062
Cp4.1LG03g06940CmaCh11G014920Cucurbita maxima (Rimu)cmacpeB145
Cp4.1LG03g06940CmaCh14G007060Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g06940CmoCh14G007250Cucurbita moschata (Rifu)cmocpeB245
Cp4.1LG03g06940CmoCh11G016270Cucurbita moschata (Rifu)cmocpeB124
Cp4.1LG03g06940Cla004058Watermelon (97103) v1cpewmB608
Cp4.1LG03g06940Csa3G588480Cucumber (Chinese Long) v2cpecuB610
Cp4.1LG03g06940MELO3C014870Melon (DHL92) v3.5.1cpemeB582
Cp4.1LG03g06940ClCG05G013370Watermelon (Charleston Gray)cpewcgB555
Cp4.1LG03g06940CSPI03G25650Wild cucumber (PI 183967)cpecpiB612
Cp4.1LG03g06940Lsi07G014670Bottle gourd (USVL1VR-Ls)cpelsiB514
Cp4.1LG03g06940MELO3C014870.2Melon (DHL92) v3.6.1cpemedB695
Cp4.1LG03g06940CsaV3_3G027170Cucumber (Chinese Long) v3cpecucB0760
Cp4.1LG03g06940Bhi01G001595Wax gourdcpewgoB0772
Cp4.1LG03g06940CsGy3G024080Cucumber (Gy14) v2cgybcpeB407
Cp4.1LG03g06940Carg09672Silver-seed gourdcarcpeB0613
Cp4.1LG03g06940Carg15571Silver-seed gourdcarcpeB0518
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g06940Cp4.1LG04g05870Cucurbita pepo (Zucchini)cpecpeB477
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g06940Cucurbita pepo (Zucchini)cpecpeB358
Cp4.1LG03g06940Cucumber (Gy14) v1cgycpeB0416
Cp4.1LG03g06940Cucurbita moschata (Rifu)cmocpeB125
Cp4.1LG03g06940Wild cucumber (PI 183967)cpecpiB608
Cp4.1LG03g06940Cucumber (Chinese Long) v2cpecuB605
Cp4.1LG03g06940Bottle gourd (USVL1VR-Ls)cpelsiB511
Cp4.1LG03g06940Watermelon (Charleston Gray)cpewcgB563
Cp4.1LG03g06940Melon (DHL92) v3.5.1cpemeB564
Cp4.1LG03g06940Cucumber (Gy14) v2cgybcpeB106
Cp4.1LG03g06940Cucumber (Gy14) v2cgybcpeB402
Cp4.1LG03g06940Melon (DHL92) v3.6.1cpemedB669
Cp4.1LG03g06940Cucumber (Chinese Long) v3cpecucB0739
Cp4.1LG03g06940Cucumber (Chinese Long) v3cpecucB0754