Carg15571 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg15571
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	F-box domain containing protein
Location	Cucurbita_argyrosperma_scaffold_059 : 283069 .. 285604 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCTCCTGTGTTTCAATCCATAGAAATTCCGATTCCGCTCTGAAATTCAGGCTCTCAATTGGGTCTAAAACGAATGAAATGGTAATTCCGCCGTCGCCGATCAAGGATAACAACGCCCTGATCAGCGGCGCTGGCGGTGCTGGCGGTGTTGACGGTGAAGGCGGTGTAGGCGGTGTAGGCGGTGTTTTTGTCAAATCTCAGAGGTCTCCTTCTCAATTAGGTATTACTTCTTTTTCTTCTTCTTGACTTTCTACAACTGTAATTCCGTTTGTTTTGTTCTTTTTCTTTGTTACTTTTGTGTTGATTGATGAACTTTGATGCTTTGAAATTAGTGGTTAGGATCATTTTTGCCTACTGATCTTCTGAAGCGAAGTCATGTGCGATCTAAAGTGTTTGGTTCTTTCTTTTTCTAATTGAATATCTTATGGAATCATTGCCTTTTGGACATATTGTTTAATTGGATTGATGATGTTGATCTAGGTCCCATTTGTTTTGTATTATCTAAATCTTCAGAGATTGATGAACAGAGGAATTTTGTTTTTAATAATTGTTCATTAAAATTAGAGAAATCCTAGATTTCCTTTCTGTCTCTTGTGGCTTGATGATCAAATTTATTAGAAGGAATTTGGGATTGTTCTGTGTTCTGAGATGAAGAAATCATTCCTTTCTTCATTGGATGCTCTGTTTCCTGTGAAGTTCTATGTATTGTTCTGAGTGGATTGTGGTTGATTATTGAACTGCTATAAGAAAAAAAAGTCTCATAGAGCTTTGTTACTATAGTTTTCTCGCTTTTTATACAAGAAATTATTAGAGGAAGCTGTCACTACGTGACGTTCGATTTCGGATGGTTGGATGTAGGAAAAATGCTTCAAAGATATTTCAAATCTTGTATTTAGACCTGCGGTTTTTCGAATCCTTACCTAACAATTATTAAGAGGTTGTGAGGACAATATCTTCTAGCGGTGGGCTTGAGCTGTTACAAATGGTATCAGAGCAAGATACCGGGCAGTACGCCAGCTAGGACGCTGGGCCCTGAAGGGGGTGGATTATGAGACCCCACATCAATTGGAGAGAGAAATGAGTGCTAGCAAGGACGTTGGGCCTCGAAGGTGGGTGGATTGAGATCCCGTATCGATTGGAAAGAGGAACGAGTGTCAGCGAGGACGTTGGACCCTGAAGAGGGGTGGATTGTGAGATCCCACATCGGTTGAAGAGGGGAACGAAGCATTGTTTATAAGGATGTGGAAACCTCTCCCTACATGACGCATTTTTAAAACTTTGAAGTGAAACTCGAAAAGGAAAATCCAAAGAGGACAATATCTGCTAGCGGTGGACTTAGACTGTTACAAAAGTAGTCTTGTTACAGGGATTGCTATCTTTGATAGATAGTTTTTTATTTCTCTTAATTTCACATGAATCCTGCCAGGGTTCATGTGAAGTGAAGAATGCTAACTCGAAAAACTTTTCACCAAAAATCGAACCCAGTAACTCGAAAAACTTCTCTTGTGTCTTTTTGGTATGATTTTTCAATGCCATGGTTTGTTTAGGCTGCTATTTCTCTTTTTTTTTAATATCCGTGAATGTTCGGGCCTCAACTATTCTCACATGACAACTGTCTCATCCTAACATGTTTGATTGCTAAAGTAACTCGTAGGATATTAAATCCTAAGTAGATGGTCACTCCGACGTAAACTCGTTCTTTCTAATCCCTTTACAATTTATACGACCCTTATTGATCACTAGGTCAAATCCATGGCGTTCATATGATTGAATTCTTTCTTTTATGTCCTTGAATTTATTCCATATGTTTTGGGTAATTTCTTCTATGTTGGCTGTTCTATGAAAGAAGTTGACAATAGAACTGTGCTGTTTTCATAGGTAGCAAAGATGAAGCGTTTTTCGATTCCCGAGGCTGGTTGGATTCGGATTGTGAAGATGATTTCTATAGTGTCAATGGTGGTAAGTAGACATTTAAAACGTTCGTTTACTCTAATAGATCACATCATATTAAAAATGATCTTATAGGTTTCCGAACTTTCAATTTTGTGAGCTTAAAGAACTCTTTTTATGCTAGTTGCATTTTGATTTCTTCTCCTAAAAGTATTCGATTGCAATGGCTGCAGACTTCACCCCTTCACGAGGAAACACTCCGGTACACCCCAGCTTCTCCTCCAGTACTCCTCGAATCAACCAAGTTCATGTCATCGACAATCAAACTCCGATCGCTGTTCCCGAACCATCACCCACAGGAAAGAAGAAGCTAGCTGAACTATTCAGGGACAGCTCCAGAAAAGACAGTGACATACAAGCCAAACCAACTCTAAACGAACTCGCGTTGCAGTCGAATCCCGAAAAGTCTCATGTGTCGAGAACAAACTCTGTATGCAGCAGCAGCGGGAGGACCTCTAATGGAGATGTCTGGACTGAGAAGGAACGGCCAGTTGGATCTGCACAATGCTGCCTCCCTAGCTTGGGACCATGTCGTAGCTTCGGCGACCGGAGGAAGAAGGCATGTCCAGCCATAGTCGTATAG

mRNA sequence

ATGGGCTCCTGTGTTTCAATCCATAGAAATTCCGATTCCGCTCTGAAATTCAGGCTCTCAATTGGGTCTAAAACGAATGAAATGGTAATTCCGCCGTCGCCGATCAAGGATAACAACGCCCTGATCAGCGGCGCTGGCGGTGCTGGCGGTGTTGACGGTGAAGGCGGTGTAGGCGGTGTAGGCGGTGTTTTTGTCAAATCTCAGAGGTCTCCTTCTCAATTAGGTAGCAAAGATGAAGCGTTTTTCGATTCCCGAGGCTGGTTGGATTCGGATTGTGAAGATGATTTCTATAGTGTCAATGGTGACTTCACCCCTTCACGAGGAAACACTCCGGTACACCCCAGCTTCTCCTCCAGTACTCCTCGAATCAACCAAGTTCATGTCATCGACAATCAAACTCCGATCGCTGTTCCCGAACCATCACCCACAGGAAAGAAGAAGCTAGCTGAACTATTCAGGGACAGCTCCAGAAAAGACAGTGACATACAAGCCAAACCAACTCTAAACGAACTCGCGTTGCAGTCGAATCCCGAAAAGTCTCATGTGTCGAGAACAAACTCTGTATGCAGCAGCAGCGGGAGGACCTCTAATGGAGATGTCTGGACTGAGAAGGAACGGCCAGTTGGATCTGCACAATGCTGCCTCCCTAGCTTGGGACCATGTCGTAGCTTCGGCGACCGGAGGAAGAAGGCATGTCCAGCCATAGTCGTATAG

Coding sequence (CDS)

ATGGGCTCCTGTGTTTCAATCCATAGAAATTCCGATTCCGCTCTGAAATTCAGGCTCTCAATTGGGTCTAAAACGAATGAAATGGTAATTCCGCCGTCGCCGATCAAGGATAACAACGCCCTGATCAGCGGCGCTGGCGGTGCTGGCGGTGTTGACGGTGAAGGCGGTGTAGGCGGTGTAGGCGGTGTTTTTGTCAAATCTCAGAGGTCTCCTTCTCAATTAGGTAGCAAAGATGAAGCGTTTTTCGATTCCCGAGGCTGGTTGGATTCGGATTGTGAAGATGATTTCTATAGTGTCAATGGTGACTTCACCCCTTCACGAGGAAACACTCCGGTACACCCCAGCTTCTCCTCCAGTACTCCTCGAATCAACCAAGTTCATGTCATCGACAATCAAACTCCGATCGCTGTTCCCGAACCATCACCCACAGGAAAGAAGAAGCTAGCTGAACTATTCAGGGACAGCTCCAGAAAAGACAGTGACATACAAGCCAAACCAACTCTAAACGAACTCGCGTTGCAGTCGAATCCCGAAAAGTCTCATGTGTCGAGAACAAACTCTGTATGCAGCAGCAGCGGGAGGACCTCTAATGGAGATGTCTGGACTGAGAAGGAACGGCCAGTTGGATCTGCACAATGCTGCCTCCCTAGCTTGGGACCATGTCGTAGCTTCGGCGACCGGAGGAAGAAGGCATGTCCAGCCATAGTCGTATAG

Protein sequence

MGSCVSIHRNSDSALKFRLSIGSKTNEMVIPPSPIKDNNALISGAGGAGGVDGEGGVGGVGGVFVKSQRSPSQLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSSSTPRINQVHVIDNQTPIAVPEPSPTGKKKLAELFRDSSRKDSDIQAKPTLNELALQSNPEKSHVSRTNSVCSSSGRTSNGDVWTEKERPVGSAQCCLPSLGPCRSFGDRRKKACPAIVV

Homology

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BLAST of Carg15571 vs. NCBI nr
Match: XP_022928326.1 (uncharacterized protein At3g27210-like [Cucurbita moschata])

HSP 1 Score: 420.2 bits (1079), Expect = 4.5e-114
Identity = 230/237 (97.05%), Postives = 230/237 (97.05%), Query Frame = 0


Query: 1   MGSCVSIHRNSDSALKFRLSIGSKTNEMVIPPSPIKDNNALISGAXXXXXXXXXXXXXXX 60
           MGSCVSIHRNSDSALKFRLSIGSKTNEMVIPPSPIKDNNALISGA   XXXXXXXXXXXX
Sbjct: 1   MGSCVSIHRNSDSALKFRLSIGSKTNEMVIPPSPIKDNNALISGA---XXXXXXXXXXXX 60

Query: 61  XXXFVKSQRSPSQLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSSST 120
           XXXFVKSQRSPSQLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSS T
Sbjct: 61  XXXFVKSQRSPSQLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSSGT 120

Query: 121 PRINQVHVIDNQTPIAVPEPSPTGKKKLAELFRDSSRKDSDIQAKPTLNELALQSNPEKS 180
           PRINQVHVIDNQTPIAVPEPSPTGKKKLAELFRDSSRKDSDIQAKPTLNELALQSNPEK 
Sbjct: 121 PRINQVHVIDNQTPIAVPEPSPTGKKKLAELFRDSSRKDSDIQAKPTLNELALQSNPEKP 180

Query: 181 HVSRTNSVCSSSGRTSNGDVWTEKERPVGSAQCCLPSLGPCRSFGDRRKKACPAIVV 238
           HVSRTNSVCSSS RTSNGDVWTEKERPVGSAQCCLPSLGPCRSFGDRRKKA PAIVV
Sbjct: 181 HVSRTNSVCSSSERTSNGDVWTEKERPVGSAQCCLPSLGPCRSFGDRRKKARPAIVV 234

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BLAST of Carg15571 vs. NCBI nr
Match: XP_022989721.1 (uncharacterized protein At3g27210-like [Cucurbita maxima])

HSP 1 Score: 413.7 bits (1062), Expect = 4.3e-112
Identity = 212/237 (89.45%), Postives = 214/237 (90.30%), Query Frame = 0


Query: 1   MGSCVSIHRNSDSALKFRLSIGSKTNEMVIPPSPIKDNNALISGAXXXXXXXXXXXXXXX 60
           MGSCVSI RNSDSALKFRLSIGSKTNEMVIPPSPIKDNNALI+G                
Sbjct: 1   MGSCVSIQRNSDSALKFRLSIGSKTNEMVIPPSPIKDNNALINGG-----------AGGV 60

Query: 61  XXXFVKSQRSPSQLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSSST 120
              FVKSQRSPSQLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSS+T
Sbjct: 61  GGVFVKSQRSPSQLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSSNT 120

Query: 121 PRINQVHVIDNQTPIAVPEPSPTGKKKLAELFRDSSRKDSDIQAKPTLNELALQSNPEKS 180
           P INQVHVIDNQTPIAVPEPSPTGKKKLAELFRDSSRKDSDIQAKPTLNELALQSNPEKS
Sbjct: 121 PWINQVHVIDNQTPIAVPEPSPTGKKKLAELFRDSSRKDSDIQAKPTLNELALQSNPEKS 180

Query: 181 HVSRTNSVCSSSGRTSNGDVWTEKERPVGSAQCCLPSLGPCRSFGDRRKKACPAIVV 238
           HVSRTNSVCSSS RTSNGDVWTEKERPVGSAQCCLPSLGPCRSFGDRRKKA PAIVV
Sbjct: 181 HVSRTNSVCSSSERTSNGDVWTEKERPVGSAQCCLPSLGPCRSFGDRRKKARPAIVV 226

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BLAST of Carg15571 vs. NCBI nr
Match: XP_023530812.1 (uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409.1 bits (1050), Expect = 1.0e-110
Identity = 211/237 (89.03%), Postives = 211/237 (89.03%), Query Frame = 0


Query: 1   MGSCVSIHRNSDSALKFRLSIGSKTNEMVIPPSPIKDNNALISGAXXXXXXXXXXXXXXX 60
           MGSCVSIHRNSDSALKFRLSIGSKTNEMVIPPSPIKDNNALISG                
Sbjct: 1   MGSCVSIHRNSDSALKFRLSIGSKTNEMVIPPSPIKDNNALISGG-----------AGGV 60

Query: 61  XXXFVKSQRSPSQLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSSST 120
              FVKSQRSPSQLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSS T
Sbjct: 61  GGVFVKSQRSPSQLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSSGT 120

Query: 121 PRINQVHVIDNQTPIAVPEPSPTGKKKLAELFRDSSRKDSDIQAKPTLNELALQSNPEKS 180
           PRINQVHVI NQTPIAV EPSPTGKKKLAELFRDSSRKDSDIQAKPTLNELALQSNPEKS
Sbjct: 121 PRINQVHVIANQTPIAVSEPSPTGKKKLAELFRDSSRKDSDIQAKPTLNELALQSNPEKS 180

Query: 181 HVSRTNSVCSSSGRTSNGDVWTEKERPVGSAQCCLPSLGPCRSFGDRRKKACPAIVV 238
           HVSRTNSVCSSS  TSNGDVWTEKERPVGSAQCCLPSLGPCRSFGDRRKKA  AIVV
Sbjct: 181 HVSRTNSVCSSSESTSNGDVWTEKERPVGSAQCCLPSLGPCRSFGDRRKKARSAIVV 226

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BLAST of Carg15571 vs. NCBI nr
Match: XP_011651566.1 (PREDICTED: uncharacterized protein At3g27210-like [Cucumis sativus] >KGN58189.1 hypothetical protein Csa_3G588480 [Cucumis sativus])

HSP 1 Score: 340.5 bits (872), Expect = 4.6e-90
Identity = 174/237 (73.42%), Postives = 187/237 (78.90%), Query Frame = 0


Query: 1   MGSCVSIHRNSDSALKFRLSIGSKTNEMVIPPSPIKDNNALISGAXXXXXXXXXXXXXXX 60
           MGSC SIHRN DSA+KF+LS+ SKT +M IPPSPIK NN  I+                 
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPIN----------------- 60

Query: 61  XXXFVKSQRSPSQLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSSST 120
              F+KSQ SPS LGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVH SFSS T
Sbjct: 61  PTVFLKSQTSPSHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGT 120

Query: 121 PRINQVHVIDNQTPIAVPEPSPTGKKKLAELFRDSSRKDSDIQAKPTLNELALQSNPEKS 180
           PRINQVH ID+QTPI +PEPSPTGKK+LAELFR+SSR  +D QAKPTLNELALQSNPE  
Sbjct: 121 PRINQVHGIDDQTPITIPEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETP 180

Query: 181 HVSRTNSVCSSSGRTSNGDVWTEKERPVGSAQCCLPSLGPCRSFGDRRKKACPAIVV 238
           ++S TNSVCSS  RT NGDVW EKERP GS QCCLPSLG C SFGDRRKKA PAI V
Sbjct: 181 YISGTNSVCSSE-RTPNGDVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219

[Close]

BLAST of Carg15571 vs. NCBI nr
Match: XP_008450086.1 (PREDICTED: uncharacterized protein At3g27210-like [Cucumis melo])

HSP 1 Score: 338.6 bits (867), Expect = 1.7e-89
Identity = 174/237 (73.42%), Postives = 185/237 (78.06%), Query Frame = 0


Query: 1   MGSCVSIHRNSDSALKFRLSIGSKTNEMVIPPSPIKDNNALISGAXXXXXXXXXXXXXXX 60
           MGSC SIHRN DSA+KF+LS+ SKTN+M IPPSPIK NN  I+                 
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTNDMAIPPSPIKQNNTPIN----------------- 60

Query: 61  XXXFVKSQRSPSQLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSSST 120
              F KSQ SPS LGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTP H SFSS T
Sbjct: 61  PTVFHKSQTSPSHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPTHSSFSSGT 120

Query: 121 PRINQVHVIDNQTPIAVPEPSPTGKKKLAELFRDSSRKDSDIQAKPTLNELALQSNPEKS 180
           PRINQVH ID+QTPI +PEPSPTGKKKLA+LFR+SSR  +D QAKPTLNELALQSNPE  
Sbjct: 121 PRINQVHGIDDQTPITIPEPSPTGKKKLADLFRESSRNGTDRQAKPTLNELALQSNPETP 180

Query: 181 HVSRTNSVCSSSGRTSNGDVWTEKERPVGSAQCCLPSLGPCRSFGDRRKKACPAIVV 238
           +VS TNSVCSS  RT NGDVW EKERP GS QCCLPSL  C SFGDRRKKA PAI V
Sbjct: 181 YVSGTNSVCSSE-RTPNGDVWAEKERPFGSVQCCLPSLRSCHSFGDRRKKASPAIAV 219

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BLAST of Carg15571 vs. TAIR10
Match: AT5G40860.1 (unknown protein)

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-15
Identity = 68/206 (33.01%), Postives = 92/206 (44.66%), Query Frame = 0


Query: 30  IPPSPIKDNNALISGAXXXXXXXXXXXXXXXXXXFVKSQRSPSQLGSKDEAFFDSRGWLD 89
           I  SP+K+N A +  A                  F  S+RS     SKDE +FDS  W  
Sbjct: 47  ISESPVKENLAPV--ATPKTVDNGLSAQVKSRWSFSSSKRSFG--SSKDETYFDSHQWQQ 106

Query: 90  SDCEDDFYSVNGDFTPSRGNTPVHPSFSSSTPRINQVHVIDNQTPIAVPEPSPTGKKKLA 149
           SD EDDFYSV GDFTPS GNTP   S S   PRI+       +  ++        +KKL 
Sbjct: 107 SDSEDDFYSVRGDFTPSVGNTP-RCSISEKLPRIHSPLFEGEKPRVSFSHSPAPRRKKLG 166

Query: 150 ELFRDSSRKDSDIQAKPTLNELALQSNPEKSHVSRTNSVCSSSGRTSNGDVWTEKER--- 209
           ELFRDS R++           + L+ + E        S C +SG     +   ++++   
Sbjct: 167 ELFRDSIREE---------RAVILEESSEYQSEKSKKSSCDNSGELKVIEESVKEKKNLK 226

Query: 210 -PVGSAQCCLPSLGPCR-SFGDRRKK 231
            P+     CLP     + S  D+RKK
Sbjct: 227 SPLNYHHRCLPRFSSFKGSLMDKRKK 238

[Close]

BLAST of Carg15571 vs. TAIR10
Match: AT3G27210.1 (unknown protein)

HSP 1 Score: 77.0 bits (188), Expect = 1.7e-14
Identity = 62/157 (39.49%), Postives = 75/157 (47.77%), Query Frame = 0


Query: 81  FFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSSSTPRINQVHVIDNQTPIAVPEP 140
           FFDS+ WL SD +DDF+SVNGDFTPS GNTP   SFS   PR + +   + +       P
Sbjct: 85  FFDSQPWLQSDSDDDFHSVNGDFTPSLGNTP-KSSFSDRPPRFHNLIFHEKKPSRGSSSP 144

Query: 141 SP-TGKKKLAELFRDSSRKDSDIQAKPTLNELALQSNPEKSHVSRTNSVCSSSGRTSN-- 200
           +P   +KKL ELFRDS R++                  E+S  S   S    SG  S   
Sbjct: 145 APLPRRKKLGELFRDSIREER-----------------EESGSSSAISTPYLSGANSREF 204

Query: 201 GDVWTEKERPVGSAQC---CLPSLGPC-RSFGDRRKK 231
            D   EKE           CLP    C  SF +RRKK
Sbjct: 205 NDTAIEKEXXXXXXXXXXRCLPGFSSCGGSFMERRKK 223

[Close]

BLAST of Carg15571 vs. TAIR10
Match: AT3G01860.1 (unknown protein)

HSP 1 Score: 72.8 bits (177), Expect = 3.2e-13
Identity = 32/45 (71.11%), Postives = 35/45 (77.78%), Query Frame = 0


Query: 77  KDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSSSTP 122
           +D  FFDSRGWLDSDC+DDF SV G+FTPSRG TPVH  F   TP
Sbjct: 63  EDMIFFDSRGWLDSDCDDDFMSVGGEFTPSRGTTPVHHKFCDQTP 107

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BLAST of Carg15571 vs. Swiss-Prot
Match: sp|Q9LK32|Y3721_ARATH (Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 3.1e-13
Identity = 62/157 (39.49%), Postives = 75/157 (47.77%), Query Frame = 0


Query: 81  FFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSSSTPRINQVHVIDNQTPIAVPEP 140
           FFDS+ WL SD +DDF+SVNGDFTPS GNTP   SFS   PR + +   + +       P
Sbjct: 85  FFDSQPWLQSDSDDDFHSVNGDFTPSLGNTP-KSSFSDRPPRFHNLIFHEKKPSRGSSSP 144

Query: 141 SP-TGKKKLAELFRDSSRKDSDIQAKPTLNELALQSNPEKSHVSRTNSVCSSSGRTSN-- 200
           +P   +KKL ELFRDS R++                  E+S  S   S    SG  S   
Sbjct: 145 APLPRRKKLGELFRDSIREER-----------------EESGSSSAISTPYLSGANSREF 204

Query: 201 GDVWTEKERPVGSAQC---CLPSLGPC-RSFGDRRKK 231
            D   EKE           CLP    C  SF +RRKK
Sbjct: 205 NDTAIEKEXXXXXXXXXXRCLPGFSSCGGSFMERRKK 223

[Close]

BLAST of Carg15571 vs. TrEMBL
Match: tr|A0A0A0LB55|A0A0A0LB55_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G588480 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 3.0e-90
Identity = 174/237 (73.42%), Postives = 187/237 (78.90%), Query Frame = 0


Query: 1   MGSCVSIHRNSDSALKFRLSIGSKTNEMVIPPSPIKDNNALISGAXXXXXXXXXXXXXXX 60
           MGSC SIHRN DSA+KF+LS+ SKT +M IPPSPIK NN  I+                 
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPIN----------------- 60

Query: 61  XXXFVKSQRSPSQLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSSST 120
              F+KSQ SPS LGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVH SFSS T
Sbjct: 61  PTVFLKSQTSPSHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGT 120

Query: 121 PRINQVHVIDNQTPIAVPEPSPTGKKKLAELFRDSSRKDSDIQAKPTLNELALQSNPEKS 180
           PRINQVH ID+QTPI +PEPSPTGKK+LAELFR+SSR  +D QAKPTLNELALQSNPE  
Sbjct: 121 PRINQVHGIDDQTPITIPEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETP 180

Query: 181 HVSRTNSVCSSSGRTSNGDVWTEKERPVGSAQCCLPSLGPCRSFGDRRKKACPAIVV 238
           ++S TNSVCSS  RT NGDVW EKERP GS QCCLPSLG C SFGDRRKKA PAI V
Sbjct: 181 YISGTNSVCSSE-RTPNGDVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219

[Close]

BLAST of Carg15571 vs. TrEMBL
Match: tr|A0A1S3BP47|A0A1S3BP47_CUCME (uncharacterized protein At3g27210-like OS=Cucumis melo OX=3656 GN=LOC103491777 PE=4 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 1.1e-89
Identity = 174/237 (73.42%), Postives = 185/237 (78.06%), Query Frame = 0


Query: 1   MGSCVSIHRNSDSALKFRLSIGSKTNEMVIPPSPIKDNNALISGAXXXXXXXXXXXXXXX 60
           MGSC SIHRN DSA+KF+LS+ SKTN+M IPPSPIK NN  I+                 
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTNDMAIPPSPIKQNNTPIN----------------- 60

Query: 61  XXXFVKSQRSPSQLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSSST 120
              F KSQ SPS LGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTP H SFSS T
Sbjct: 61  PTVFHKSQTSPSHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPTHSSFSSGT 120

Query: 121 PRINQVHVIDNQTPIAVPEPSPTGKKKLAELFRDSSRKDSDIQAKPTLNELALQSNPEKS 180
           PRINQVH ID+QTPI +PEPSPTGKKKLA+LFR+SSR  +D QAKPTLNELALQSNPE  
Sbjct: 121 PRINQVHGIDDQTPITIPEPSPTGKKKLADLFRESSRNGTDRQAKPTLNELALQSNPETP 180

Query: 181 HVSRTNSVCSSSGRTSNGDVWTEKERPVGSAQCCLPSLGPCRSFGDRRKKACPAIVV 238
           +VS TNSVCSS  RT NGDVW EKERP GS QCCLPSL  C SFGDRRKKA PAI V
Sbjct: 181 YVSGTNSVCSSE-RTPNGDVWAEKERPFGSVQCCLPSLRSCHSFGDRRKKASPAIAV 219

[Close]

BLAST of Carg15571 vs. TrEMBL
Match: tr|A0A2N9F4V7|A0A2N9F4V7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10075 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 1.2e-57
Identity = 144/259 (55.60%), Postives = 179/259 (69.11%), Query Frame = 0


Query: 1   MGSCVSIHRNSDSALKFRLSIGSKTNEMVIPPSPIKDNNALISGAXXXXXXXXXXXXXXX 60
           MGSCVS+HRNSDSA+K+RLS GSK +++VIPPSPIK+N              XXXXXXXX
Sbjct: 1   MGSCVSMHRNSDSAMKYRLSFGSKEDKLVIPPSPIKEN------PTNGDRPIXXXXXXXX 60

Query: 61  XXXFVKSQRSPSQL-------GSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVH 120
           XXX VKSQ SPS+        GSK+E FFDS+ WL+SDCEDDFYSVNGDFTPSRGNTPVH
Sbjct: 61  XXXXVKSQWSPSRSNTSFGVHGSKEETFFDSQAWLESDCEDDFYSVNGDFTPSRGNTPVH 120

Query: 121 PSFSSSTPRINQVHVIDNQTPIAVPEPSPTG-KKKLAELFRDSSRKDSDIQ--------- 180
            +FS  TPR+++    +++ P+++ +PSPT  KKKL+ELF++S R D D+          
Sbjct: 121 HNFSMGTPRVSKAR-FEDRIPVSLSQPSPTDKKKKLSELFQESIRHDQDVDNQNNNLNMA 180

Query: 181 -----AKPTLNELALQSNPEKSHVSRTNSVCSSSGRTSNGDVWTEKERPVGSAQCCLPSL 238
                 KPT+ +L  +S     H   TNSVCSS  RT NG+++TEKE+P+ S QCCLPSL
Sbjct: 181 NGNMAVKPTVLDLPPRSAHATPH--GTNSVCSSE-RTPNGELYTEKEKPIRSVQCCLPSL 240

[Close]

BLAST of Carg15571 vs. TrEMBL
Match: tr|A0A061ECX1|A0A061ECX1_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_017164 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.6e-51
Identity = 127/259 (49.03%), Postives = 164/259 (63.32%), Query Frame = 0


Query: 1   MGSCVSIHRNS-DSALKFRLSIGSKTNEMVIPPSPIKDNNALISGAXXXXXXXXXXXXXX 60
           MGSCVS+H++S +SA+K  LS GSKT++++IPPSP+K+  A                   
Sbjct: 1   MGSCVSVHKSSQESAMKLGLSFGSKTDKLIIPPSPVKEKPA------------------- 60

Query: 61  XXXXFVKSQRSPS---QLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSF 120
               F  + +SPS    LGSKDE FFDSR WLDSDCEDDF+SVNGDFTPSRGNTPVH SF
Sbjct: 61  ANCDFALNVQSPSTLKDLGSKDETFFDSRAWLDSDCEDDFFSVNGDFTPSRGNTPVHHSF 120

Query: 121 SSSTPRINQVHVIDNQTPIAVPEPSPTG-KKKLAELFRDSSRKDSD-------------- 180
           +  TP++ +    +  +P +V E SPTG KKKL ELFR+S R+D D              
Sbjct: 121 AMGTPQVKK--GTEEGSPGSVSETSPTGKKKKLVELFRESIREDQDVNELNTPRNQDLAN 180

Query: 181 --IQAKPTLNELALQSNPEKS-HVSRTNSVCSSSGRTSNGDVWTEKERPVGSAQCCLPSL 238
             I+AKPT+ +L    + + + +VS  NS+C+S  RT+NGD    KE+P  S QCCLPSL
Sbjct: 181 GKIEAKPTIQDLLPPKSADGTPYVSGANSLCTSE-RTANGDNPIFKEKPFKSVQCCLPSL 237

[Close]

BLAST of Carg15571 vs. TrEMBL
Match: tr|A0A2I4ERR0|A0A2I4ERR0_9ROSI (uncharacterized protein At3g27210-like OS=Juglans regia OX=51240 GN=LOC108992085 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 2.1e-51
Identity = 124/255 (48.63%), Postives = 158/255 (61.96%), Query Frame = 0


Query: 1   MGSCVSIHRNSDSALKFRLSIGSKTNEMVIPPSPIKDNNALISGAXXXXXXXXXXXXXXX 60
           MGSC S+HR+SDSA+K RLS GSK +++VIPPSPIK+    I                  
Sbjct: 1   MGSCASLHRSSDSAMKLRLSFGSKDDKLVIPPSPIKE----IPTNGNPPIDINNVVAAKS 60

Query: 61  XXXFVKSQRSPSQLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHPSFSSST 120
                +S  S    GSK+E FFDS+ WLDSDC+DDF+SVNGDFTPSRGNTPVH +FS   
Sbjct: 61  QWPASRSTASFGGYGSKEETFFDSQAWLDSDCDDDFFSVNGDFTPSRGNTPVHNNFSPRM 120

Query: 121 PRINQVHVIDNQTPIAVPEPSPTGKKKLAELFRDSSRKDSDI----------------QA 180
           P++N+VH   ++ P +  EPSP  KKKL ELFR+S R+D D+                + 
Sbjct: 121 PQVNKVHYEADRIPGSTHEPSP--KKKLIELFRESVRQDQDVDNLNTSGNQNISNGKMEV 180

Query: 181 KPTLNELALQSNPEKSHVS--RTNSVCSSSGRTSNGDVWTEKERPVGSAQCCLPSLGPCR 238
           KPT+ +L     P+ +H +   T+SVCSS  RT +GD+ TEKE+P    QCCLPSL  CR
Sbjct: 181 KPTVLDLP----PKSAHGTPYGTHSVCSSE-RTPSGDLLTEKEKPFRPVQCCLPSLISCR 240

The following BLAST results are available for this feature:

BLAST of Carg15571 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928326.1	4.5e-114	97.05	uncharacterized protein At3g27210-like [Cucurbita moschata]	[more]
XP_022989721.1	4.3e-112	89.45	uncharacterized protein At3g27210-like [Cucurbita maxima]	[more]
XP_023530812.1	1.0e-110	89.03	uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo]	[more]
XP_011651566.1	4.6e-90	73.42	PREDICTED: uncharacterized protein At3g27210-like [Cucumis sativus] >KGN58189.1 ...	[more]
XP_008450086.1	1.7e-89	73.42	PREDICTED: uncharacterized protein At3g27210-like [Cucumis melo]	[more]

BLAST of Carg15571 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G40860.1	1.2e-15	33.01	unknown protein	[more]
AT3G27210.1	1.7e-14	39.49	unknown protein	[more]
AT3G01860.1	3.2e-13	71.11	unknown protein	[more]

BLAST of Carg15571 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LK32\|Y3721_ARATH	3.1e-13	39.49	Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV...	[more]

BLAST of Carg15571 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LB55\|A0A0A0LB55_CUCSA	3.0e-90	73.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G588480 PE=4 SV=1	[more]
tr\|A0A1S3BP47\|A0A1S3BP47_CUCME	1.1e-89	73.42	uncharacterized protein At3g27210-like OS=Cucumis melo OX=3656 GN=LOC103491777 P...	[more]
tr\|A0A2N9F4V7\|A0A2N9F4V7_FAGSY	1.2e-57	55.60	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10075 PE=4 SV=1	[more]
tr\|A0A061ECX1\|A0A061ECX1_THECC	1.6e-51	49.03	Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_017164 PE=4 ...	[more]
tr\|A0A2I4ERR0\|A0A2I4ERR0_9ROSI	2.1e-51	48.63	uncharacterized protein At3g27210-like OS=Juglans regia OX=51240 GN=LOC108992085...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR038947	At3g27210-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg15571-RA	Carg15571-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 172..206
None	No IPR available	PANTHER	PTHR34280:SF2	SUBFAMILY NOT NAMED	coord: 1..237
IPR038947	At3g27210-like	PANTHER	PTHR34280	FAMILY NOT NAMED	coord: 1..237

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg15571	Cla004058	Watermelon (97103) v1	carwmB0360
Carg15571	Csa3G588480	Cucumber (Chinese Long) v2	carcuB0395
Carg15571	MELO3C014870	Melon (DHL92) v3.5.1	carmeB0373
Carg15571	ClCG05G013370	Watermelon (Charleston Gray)	carwcgB0361
Carg15571	CSPI03G25650	Wild cucumber (PI 183967)	carcpiB0400
Carg15571	Cucsa.054240	Cucumber (Gy14) v1	carcgyB0425
Carg15571	CmaCh14G007060	Cucurbita maxima (Rimu)	carcmaB0521
Carg15571	CmaCh11G014920	Cucurbita maxima (Rimu)	carcmaB0520
Carg15571	CmoCh14G007250	Cucurbita moschata (Rifu)	carcmoB0504
Carg15571	CmoCh11G016270	Cucurbita moschata (Rifu)	carcmoB0502
Carg15571	Lsi07G014670	Bottle gourd (USVL1VR-Ls)	carlsiB337
Carg15571	Cp4.1LG03g06940	Cucurbita pepo (Zucchini)	carcpeB0518
Carg15571	Cp4.1LG04g05870	Cucurbita pepo (Zucchini)	carcpeB0519
Carg15571	CsGy3G024080	Cucumber (Gy14) v2	carcgybB0375
Carg15571	MELO3C014870.2	Melon (DHL92) v3.6.1	carmedB0378
Carg15571	CsaV3_3G027170	Cucumber (Chinese Long) v3	carcucB0399
Carg15571	Bhi01G001595	Wax gourd	carwgoB0453

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg15571	Carg09672	Silver-seed gourd	carcarB397

The following block(s) are covering this gene:


Gene	Organism	Block
Carg15571	Silver-seed gourd	carcarB387
Carg15571	Silver-seed gourd	carcarB399
Carg15571	Cucumber (Gy14) v2	carcgybB0374
Carg15571	Cucurbita maxima (Rimu)	carcmaB0518
Carg15571	Cucurbita maxima (Rimu)	carcmaB0519
Carg15571	Cucurbita moschata (Rifu)	carcmoB0503
Carg15571	Cucurbita pepo (Zucchini)	carcpeB0520
Carg15571	Cucurbita pepo (Zucchini)	carcpeB0516
Carg15571	Wild cucumber (PI 183967)	carcpiB0399
Carg15571	Cucumber (Chinese Long) v2	carcuB0394
Carg15571	Cucumber (Chinese Long) v3	carcucB0398
Carg15571	Bottle gourd (USVL1VR-Ls)	carlsiB335
Carg15571	Melon (DHL92) v3.5.1	carmeB0371
Carg15571	Melon (DHL92) v3.6.1	carmedB0376
Carg15571	Watermelon (Charleston Gray)	carwcgB0362
Carg15571	Watermelon (97103) v1	carwmB0363
Carg15571	Watermelon (97103) v2	carwmbB0387
Carg15571	Watermelon (97103) v2	carwmbB0388