Carg09672 (gene) Silver-seed gourd

Overview
NameCarg09672
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionF-box domain containing protein
LocationCucurbita_argyrosperma_scaffold_023 : 265153 .. 267992 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAACCGTCGTCTTCTTTCATCTCCCCACTCCTCTCTCCAAAACCCCATTTTCATTTCTTCATTTCCAGTCCCTGATGATCACGCAGCCATCAAATTAAGCCAAGAACAGAGCAAAATCATCAATGGGTTCCTGTGTTTCAATCCATAGAAACTCCGATTCCGCCGTGAAATTCCGACTCTCAAATGGCTCTAAACCCAACGGTTTGCCAATTCCTCCCTCCCCGATCAAAGACAACGACACTCCGATCATCGGAAACCCTCCCATTCATGGCGGCGTCTTCGTCAAATCTCAGAGCTCCCCTTCTCACTTCGGTACTCATCATCCGTTTCTTCTTCTTCTTGACTTTGTTCAAGTTTAATCGGCTTTGTTTTCTTCTTTTTGTTTCCTTTCTCTGAATTATTTCTTGCTGATTTGTTTTAGTTGAGTGATGAACTTTGCGATCTAAAGTGTTTGCTTCTTGCGTGTCCCTGATTTGACTTTGATTGCTTTCACATGATCTAACCCTGTTTTCTTTTTCTAATTCAATATCTTATAGGATCATTGTTTAATTGGAACGATAAAGTTAATCTAGGTCCCATTTGTTTTATTGTTATAAAAAATTAAAATATCGATCTCTTTTCCAATGTAAATCCCCAGAGATTGATGAACAGGAGAAGAATTTTCCTCTTTCTTTTCGAATAATTATTCATTAAACTTGGACAAACCCCAGATTTCTTAGAATTGGCACAGTTCTATCTATATATTGTTATCAGTGGATTGATCCTTTGATGGGTGTTGCATACCAGAGTTCTTGAGTTTGTCTTTTGATAAGAACATTGTCATGAGTTTCTATCCATCTCACATGGAGCATGCCAGAGTTCATGGAAAGTGAGGAATGCTTACTCAACGTCTTAAGTCCTTATCAGCAGGGCCACCCCTTCGGGGCTAATTGATAGCTATTACTAAGCTGCCAGTCTATTACAAGTTTAGCTTAGCCTTTCCTGTTTGGTTCATTTTGAAGAATCATTTGTTCTTGTATGATCATTTGTTCTTAGAATTGCATAGATGAAGCACTTTCTGTTCTTGGACTACTTTCACAAGGTTGCTGTTCTTCACTTATCTGTGTTTGGAGTTCCATTTTTAGTGGGTCTTTGTTGCTTTATGTAACCGTCCAAGCCCACCGCTAGCTGATATTGTGTAACGGTCCAAGCCCACTGCAAGCTGATATTGTTCTCTTTGGGCTTTTCCTTTCGGGTTTCCCCTCAATGTTTCTAAAACGTGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAAAGTGTTTCGTTCTCCTCTCCATGTGAGATCTTACAATCCATCTAAAGAGGACAATATCTGCTAGCGGTAGGCTTGGGCCATTACATATTGTTTGCTTTGACTCGTTACGTATCGCTGTCAACCTCATGGTTTTAAAACGCGTCTATTAGGGAAAGTTTTCCATACCAAGGAATGCTTCGTTCTCCTCTCCAACCGATGTGGGATCTCACAATCTACCTCCTTGGGGGCCAGCATCCTCACTGGCACACCTCCCGGTGTCTGGCGTTGATACCATTTGTAACAGCCCAAGCCCACCGTTACCAGATATTATCCGAGTTGGCCAATTGTGAGATCCCACATTGGTTGGAGAGGGGAACGAAACATTTCTTTAAGGATGTGGAAACCACTCCCTAGTTGACGCGTTTTAAAACCGTAAGGCTGACAACGATACATAACGTGCCAAAGCAGACAATATCTATTAGCTGTGGACTTGAGTTGTTATTTCATTGGCTGCTATTAGAATGCTTATATTGTCATAGTGAGTTCTTTCTTTTGTGTCCTTTCTTGAAAGAGTTCTTCACACTAGTCCTTGTGTTTATATATGTTTTGCTATCTATCTCGCCTACTTTTGTATGAACTCTGAAATGGCTGTTCTATGAAAGAAGCAAGTTGACAATGGAGCTTTAAACTGGTCTCATAGGTAGCAAAGATGAAGCGTTTTTCGAGTCCCGAGGCTGGTTGGATTCGGATTGTGAAGATGATTTCTACAGTGTCAATGGTGGTAAGTAGTCATTAGAATTCTTTTATGCTGTTAGTCTCCTTATCTAAAGCATTCAATTGCAATGGCTGCAGATTTCACCCCGTCACGAGGAAACACTCCGGTACGCACGAGCTTCTCCTCCGGTACTCCACGGATGAACCAAGTTCACGTCGTCGATGATCTAACTCCAATTGCCATGCCCAAACCATCACCAACAGGAAAGAAGAAACTGGCTGAACTTTTCAGGGATAGCTCAAGAAATGGCACTGACATACAAACCAAACCAACACTAAACGAACTCGCCCTGCAATCAAATCCCGAAACGCCTTACATGTCGGGAACAAACTCCGTATGCAGCAGCGAGAGGACCTCAAATGGAGGAGATGTCTGGATTGAAAAGGAGAGACGATTTGGATCTGCACAATGCTGCCTCCCAAGCTTGGGATCACGTCGTAGCTTCAGCGACCGGAGGAAGAAGGCAAGTCCCGCCATAGCTGTATAAACACAACGCTCGATCAAACACGCCACGAGCTGCAAATTCCCTCTGAATTTCTGCCATTGTGAGACCCCAAAGCTCATGGAGTAGCTCACAATTGTTCAGAAATGTGTAAAGTCCTGAAATATCAGATACAGATATTGGTGTTGTTGAAGGCTGTGTCTATGTATAAACATGTCTTAGATTCTTAGTACATTCATATCAGAATATCTTAGAAATCAAAGAGGAGAAGAAGAAGAAGAAGAAGATGAAAGCAATGGGACTTTTTTGGGTTTTTCCTGAGAATTATAATAAACAACCTTTTTCATA

mRNA sequence

CAAACCGTCGTCTTCTTTCATCTCCCCACTCCTCTCTCCAAAACCCCATTTTCATTTCTTCATTTCCAGTCCCTGATGATCACGCAGCCATCAAATTAAGCCAAGAACAGAGCAAAATCATCAATGGGTTCCTGTGTTTCAATCCATAGAAACTCCGATTCCGCCGTGAAATTCCGACTCTCAAATGGCTCTAAACCCAACGGTTTGCCAATTCCTCCCTCCCCGATCAAAGACAACGACACTCCGATCATCGGAAACCCTCCCATTCATGGCGGCGTCTTCGTCAAATCTCAGAGCTCCCCTTCTCACTTCGGTAGCAAAGATGAAGCGTTTTTCGAGTCCCGAGGCTGGTTGGATTCGGATTGTGAAGATGATTTCTACAGTGTCAATGGTGATTTCACCCCGTCACGAGGAAACACTCCGGTACGCACGAGCTTCTCCTCCGGTACTCCACGGATGAACCAAGTTCACGTCGTCGATGATCTAACTCCAATTGCCATGCCCAAACCATCACCAACAGGAAAGAAGAAACTGGCTGAACTTTTCAGGGATAGCTCAAGAAATGGCACTGACATACAAACCAAACCAACACTAAACGAACTCGCCCTGCAATCAAATCCCGAAACGCCTTACATGTCGGGAACAAACTCCGTATGCAGCAGCGAGAGGACCTCAAATGGAGGAGATGTCTGGATTGAAAAGGAGAGACGATTTGGATCTGCACAATGCTGCCTCCCAAGCTTGGGATCACGTCGTAGCTTCAGCGACCGGAGGAAGAAGGCAAGTCCCGCCATAGCTGTATAAACACAACGCTCGATCAAACACGCCACGAGCTGCAAATTCCCTCTGAATTTCTGCCATTGTGAGACCCCAAAGCTCATGGAGTAGCTCACAATTGTTCAGAAATGTGTAAAGTCCTGAAATATCAGATACAGATATTGGTGTTGTTGAAGGCTGTGTCTATGTATAAACATGTCTTAGATTCTTAGTACATTCATATCAGAATATCTTAGAAATCAAAGAGGAGAAGAAGAAGAAGAAGAAGATGAAAGCAATGGGACTTTTTTGGGTTTTTCCTGAGAATTATAATAAACAACCTTTTTCATA

Coding sequence (CDS)

ATGGGTTCCTGTGTTTCAATCCATAGAAACTCCGATTCCGCCGTGAAATTCCGACTCTCAAATGGCTCTAAACCCAACGGTTTGCCAATTCCTCCCTCCCCGATCAAAGACAACGACACTCCGATCATCGGAAACCCTCCCATTCATGGCGGCGTCTTCGTCAAATCTCAGAGCTCCCCTTCTCACTTCGGTAGCAAAGATGAAGCGTTTTTCGAGTCCCGAGGCTGGTTGGATTCGGATTGTGAAGATGATTTCTACAGTGTCAATGGTGATTTCACCCCGTCACGAGGAAACACTCCGGTACGCACGAGCTTCTCCTCCGGTACTCCACGGATGAACCAAGTTCACGTCGTCGATGATCTAACTCCAATTGCCATGCCCAAACCATCACCAACAGGAAAGAAGAAACTGGCTGAACTTTTCAGGGATAGCTCAAGAAATGGCACTGACATACAAACCAAACCAACACTAAACGAACTCGCCCTGCAATCAAATCCCGAAACGCCTTACATGTCGGGAACAAACTCCGTATGCAGCAGCGAGAGGACCTCAAATGGAGGAGATGTCTGGATTGAAAAGGAGAGACGATTTGGATCTGCACAATGCTGCCTCCCAAGCTTGGGATCACGTCGTAGCTTCAGCGACCGGAGGAAGAAGGCAAGTCCCGCCATAGCTGTATAA

Protein sequence

MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSPSHFGSKDEAFFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRMNQVHVVDDLTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSSERTSNGGDVWIEKERRFGSAQCCLPSLGSRRSFSDRRKKASPAIAV
Homology
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BLAST of Carg09672 vs. NCBI nr
Match: XP_022935009.1 (uncharacterized protein At3g27210 [Cucurbita moschata])

HSP 1 Score: 456.4 bits (1173), Expect = 5.5e-125
Identity = 223/226 (98.67%), Postives = 225/226 (99.56%), Query Frame = 0 

Query: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60
           MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP
Sbjct: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60

Query: 61  SHFGSKDEAFFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRMNQVHVVDD 120
           SHFGSKDEAFFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRMNQVHV+DD
Sbjct: 61  SHFGSKDEAFFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRMNQVHVLDD 120

Query: 121 LTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS 180
           LTPI MPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS
Sbjct: 121 LTPIVMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS 180

Query: 181 ERTSNGGDVWIEKERRFGSAQCCLPSLGSRRSFSDRRKKASPAIAV 227
           ERTSNGGDVWIEKE+RFGSAQCCLPSLGSRRSFSDRRKKASPAIAV
Sbjct: 181 ERTSNGGDVWIEKEKRFGSAQCCLPSLGSRRSFSDRRKKASPAIAV 226

[Close]
BLAST of Carg09672 vs. NCBI nr
Match: XP_023529186.1 (uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 454.9 bits (1169), Expect = 1.6e-124
Identity = 222/226 (98.23%), Postives = 225/226 (99.56%), Query Frame = 0 

Query: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60
           MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP
Sbjct: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60

Query: 61  SHFGSKDEAFFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRMNQVHVVDD 120
           SHFGSKDEAFF+SRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPR+NQVHVVDD
Sbjct: 61  SHFGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRINQVHVVDD 120

Query: 121 LTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS 180
           LTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS
Sbjct: 121 LTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS 180

Query: 181 ERTSNGGDVWIEKERRFGSAQCCLPSLGSRRSFSDRRKKASPAIAV 227
           ERTSNGGDVWIEKE+RFGSAQCCLPSLGSRRSF DRRKKASPAIAV
Sbjct: 181 ERTSNGGDVWIEKEKRFGSAQCCLPSLGSRRSFGDRRKKASPAIAV 226

[Close]
BLAST of Carg09672 vs. NCBI nr
Match: XP_022982708.1 (uncharacterized protein At3g27210-like [Cucurbita maxima])

HSP 1 Score: 449.9 bits (1156), Expect = 5.1e-123
Identity = 219/226 (96.90%), Postives = 225/226 (99.56%), Query Frame = 0 

Query: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60
           MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP
Sbjct: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60

Query: 61  SHFGSKDEAFFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRMNQVHVVDD 120
           SHFGSKD+AFF+SRGWLDSDCEDDFYSVNGDFTPS+GNTPVRTSFSSGTPR+NQVHVV+D
Sbjct: 61  SHFGSKDDAFFDSRGWLDSDCEDDFYSVNGDFTPSQGNTPVRTSFSSGTPRINQVHVVND 120

Query: 121 LTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS 180
           LTPIAMPKPSPTGKKKLAELFRDSSRNGT+IQTKPTLNELALQSNPETPYMSGTNSVCSS
Sbjct: 121 LTPIAMPKPSPTGKKKLAELFRDSSRNGTEIQTKPTLNELALQSNPETPYMSGTNSVCSS 180

Query: 181 ERTSNGGDVWIEKERRFGSAQCCLPSLGSRRSFSDRRKKASPAIAV 227
           ERTSNGGDVWIEKERRFGSAQCCLPSLGSRRSF DRRKKASPAIAV
Sbjct: 181 ERTSNGGDVWIEKERRFGSAQCCLPSLGSRRSFGDRRKKASPAIAV 226

[Close]
BLAST of Carg09672 vs. NCBI nr
Match: XP_011651566.1 (PREDICTED: uncharacterized protein At3g27210-like [Cucumis sativus] >KGN58189.1 hypothetical protein Csa_3G588480 [Cucumis sativus])

HSP 1 Score: 353.2 bits (905), Expect = 6.5e-94
Identity = 180/226 (79.65%), Postives = 195/226 (86.28%), Query Frame = 0 

Query: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60
           MGSC SIHRN DSA+KF+LS  SK   + IPPSPIK N+TPI  NP     VF+KSQ+SP
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPI--NPT----VFLKSQTSP 60

Query: 61  SHFGSKDEAFFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRMNQVHVVDD 120
           SH GSKDEAFF+SRGWLDSDCEDDFYSVNGDFTPSRGNTPV +SFSSGTPR+NQVH +DD
Sbjct: 61  SHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDD 120

Query: 121 LTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS 180
            TPI +P+PSPTGKK+LAELFR+SSRNGTD Q KPTLNELALQSNPETPY+SGTNSVCSS
Sbjct: 121 QTPITIPEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSS 180

Query: 181 ERTSNGGDVWIEKERRFGSAQCCLPSLGSRRSFSDRRKKASPAIAV 227
           ERT N GDVW EKER FGS QCCLPSLGS  SF DRRKKASPAIAV
Sbjct: 181 ERTPN-GDVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219

[Close]
BLAST of Carg09672 vs. NCBI nr
Match: XP_008450086.1 (PREDICTED: uncharacterized protein At3g27210-like [Cucumis melo])

HSP 1 Score: 350.5 bits (898), Expect = 4.2e-93
Identity = 179/226 (79.20%), Postives = 193/226 (85.40%), Query Frame = 0 

Query: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60
           MGSC SIHRN DSA+KF+LS  SK N + IPPSPIK N+TPI  NP     VF KSQ+SP
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTNDMAIPPSPIKQNNTPI--NPT----VFHKSQTSP 60

Query: 61  SHFGSKDEAFFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRMNQVHVVDD 120
           SH GSKDEAFF+SRGWLDSDCEDDFYSVNGDFTPSRGNTP  +SFSSGTPR+NQVH +DD
Sbjct: 61  SHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPTHSSFSSGTPRINQVHGIDD 120

Query: 121 LTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS 180
            TPI +P+PSPTGKKKLA+LFR+SSRNGTD Q KPTLNELALQSNPETPY+SGTNSVCSS
Sbjct: 121 QTPITIPEPSPTGKKKLADLFRESSRNGTDRQAKPTLNELALQSNPETPYVSGTNSVCSS 180

Query: 181 ERTSNGGDVWIEKERRFGSAQCCLPSLGSRRSFSDRRKKASPAIAV 227
           ERT N GDVW EKER FGS QCCLPSL S  SF DRRKKASPAIAV
Sbjct: 181 ERTPN-GDVWAEKERPFGSVQCCLPSLRSCHSFGDRRKKASPAIAV 219

[Close]
BLAST of Carg09672 vs. TAIR10
Match: AT3G27210.1 (unknown protein)

HSP 1 Score: 89.7 bits (221), Expect = 2.4e-18
Identity = 72/166 (43.37%), Postives = 86/166 (51.81%), Query Frame = 0 

Query: 70  FFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRMNQV--HVVDDLTPIAMP 129
           FF+S+ WL SD +DDF+SVNGDFTPS GNTP ++SFS   PR + +  H        + P
Sbjct: 85  FFDSQPWLQSDSDDDFHSVNGDFTPSLGNTP-KSSFSDRPPRFHNLIFHEKKPSRGSSSP 144

Query: 130 KPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSSERTSNGG 189
            P P  +KKL ELFRDS R   +        E    S   TPY+SG NS     R  N  
Sbjct: 145 APLPR-RKKLGELFRDSIREERE--------ESGSSSAISTPYLSGANS-----REFN-- 204

Query: 190 DVWIEKERRFGSAQC---CLPSLGS-RRSFSDRRKKAS---PAIAV 227
           D  IEKE           CLP   S   SF +RRKK S   P +AV
Sbjct: 205 DTAIEKEXXXXXXXXXXRCLPGFSSCGGSFMERRKKMSSETPVVAV 233

[Close]
BLAST of Carg09672 vs. TAIR10
Match: AT3G01860.1 (unknown protein)

HSP 1 Score: 85.9 bits (211), Expect = 3.5e-17
Identity = 53/119 (44.54%), Postives = 65/119 (54.62%), Query Frame = 0 

Query: 1   MGSCVSIHRN-----SDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVK 60
           MGSCVS  ++     SDS VK   S  SKP+  P   + +    + I GNPPI  G +  
Sbjct: 1   MGSCVSSSQSKSSSASDSVVKL-ASFISKPDSTPPLKTDVMITSSTINGNPPIDSGRWDS 60

Query: 61  SQSSPSHFGSKDEAFFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRMNQ 115
                     +D  FF+SRGWLDSDC+DDF SV G+FTPSRG TPV   F   TP   +
Sbjct: 61  G-------NKEDMIFFDSRGWLDSDCDDDFMSVGGEFTPSRGTTPVHHKFCDQTPHQGE 111

[Close]
BLAST of Carg09672 vs. TAIR10
Match: AT5G40860.1 (unknown protein)

HSP 1 Score: 84.3 bits (207), Expect = 1.0e-16
Identity = 72/214 (33.64%), Postives = 99/214 (46.26%), Query Frame = 0 

Query: 25  PNGLPIPPSPIKDNDTPIIGNPPIHGGVF--VKSQ----SSPSHFG-SKDEAFFESRGWL 84
           P+   I  SP+K+N  P+     +  G+   VKS+    SS   FG SKDE +F+S  W 
Sbjct: 42  PSTKKISESPVKENLAPVATPKTVDNGLSAQVKSRWSFSSSKRSFGSSKDETYFDSHQWQ 101

Query: 85  DSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRMNQVHVVDDLTPIAMPKPSPTGKKKL 144
            SD EDDFYSV GDFTPS GNTP R S S   PR++      +   ++        +KKL
Sbjct: 102 QSDSEDDFYSVRGDFTPSVGNTP-RCSISEKLPRIHSPLFEGEKPRVSFSHSPAPRRKKL 161

Query: 145 AELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSSERTSNGGDVWIEKERRF 204
            ELFRDS R             + L+ + E        S C +       +  +++++  
Sbjct: 162 GELFRDSIREE---------RAVILEESSEYQSEKSKKSSCDNSGELKVIEESVKEKKNL 221

Query: 205 GSA----QCCLPSLGS-RRSFSDRRKKASPAIAV 227
            S       CLP   S + S  D+RKK    I V
Sbjct: 222 KSPLNYHHRCLPRFSSFKGSLMDKRKKKKKKIHV 245

[Close]
BLAST of Carg09672 vs. Swiss-Prot
Match: sp|Q9LK32|Y3721_ARATH (Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.4e-17
Identity = 72/166 (43.37%), Postives = 86/166 (51.81%), Query Frame = 0 

Query: 70  FFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRMNQV--HVVDDLTPIAMP 129
           FF+S+ WL SD +DDF+SVNGDFTPS GNTP ++SFS   PR + +  H        + P
Sbjct: 85  FFDSQPWLQSDSDDDFHSVNGDFTPSLGNTP-KSSFSDRPPRFHNLIFHEKKPSRGSSSP 144

Query: 130 KPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSSERTSNGG 189
            P P  +KKL ELFRDS R   +        E    S   TPY+SG NS     R  N  
Sbjct: 145 APLPR-RKKLGELFRDSIREERE--------ESGSSSAISTPYLSGANS-----REFN-- 204

Query: 190 DVWIEKERRFGSAQC---CLPSLGS-RRSFSDRRKKAS---PAIAV 227
           D  IEKE           CLP   S   SF +RRKK S   P +AV
Sbjct: 205 DTAIEKEXXXXXXXXXXRCLPGFSSCGGSFMERRKKMSSETPVVAV 233

[Close]
BLAST of Carg09672 vs. TrEMBL
Match: tr|A0A0A0LB55|A0A0A0LB55_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G588480 PE=4 SV=1)

HSP 1 Score: 353.2 bits (905), Expect = 4.3e-94
Identity = 180/226 (79.65%), Postives = 195/226 (86.28%), Query Frame = 0 

Query: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60
           MGSC SIHRN DSA+KF+LS  SK   + IPPSPIK N+TPI  NP     VF+KSQ+SP
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTTDMEIPPSPIKQNNTPI--NPT----VFLKSQTSP 60

Query: 61  SHFGSKDEAFFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRMNQVHVVDD 120
           SH GSKDEAFF+SRGWLDSDCEDDFYSVNGDFTPSRGNTPV +SFSSGTPR+NQVH +DD
Sbjct: 61  SHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPVHSSFSSGTPRINQVHGIDD 120

Query: 121 LTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS 180
            TPI +P+PSPTGKK+LAELFR+SSRNGTD Q KPTLNELALQSNPETPY+SGTNSVCSS
Sbjct: 121 QTPITIPEPSPTGKKRLAELFRESSRNGTDRQAKPTLNELALQSNPETPYISGTNSVCSS 180

Query: 181 ERTSNGGDVWIEKERRFGSAQCCLPSLGSRRSFSDRRKKASPAIAV 227
           ERT N GDVW EKER FGS QCCLPSLGS  SF DRRKKASPAIAV
Sbjct: 181 ERTPN-GDVWGEKERPFGSVQCCLPSLGSCHSFGDRRKKASPAIAV 219

[Close]
BLAST of Carg09672 vs. TrEMBL
Match: tr|A0A1S3BP47|A0A1S3BP47_CUCME (uncharacterized protein At3g27210-like OS=Cucumis melo OX=3656 GN=LOC103491777 PE=4 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 2.8e-93
Identity = 179/226 (79.20%), Postives = 193/226 (85.40%), Query Frame = 0 

Query: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSSP 60
           MGSC SIHRN DSA+KF+LS  SK N + IPPSPIK N+TPI  NP     VF KSQ+SP
Sbjct: 1   MGSCASIHRNPDSAMKFKLSLASKTNDMAIPPSPIKQNNTPI--NPT----VFHKSQTSP 60

Query: 61  SHFGSKDEAFFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRMNQVHVVDD 120
           SH GSKDEAFF+SRGWLDSDCEDDFYSVNGDFTPSRGNTP  +SFSSGTPR+NQVH +DD
Sbjct: 61  SHLGSKDEAFFDSRGWLDSDCEDDFYSVNGDFTPSRGNTPTHSSFSSGTPRINQVHGIDD 120

Query: 121 LTPIAMPKPSPTGKKKLAELFRDSSRNGTDIQTKPTLNELALQSNPETPYMSGTNSVCSS 180
            TPI +P+PSPTGKKKLA+LFR+SSRNGTD Q KPTLNELALQSNPETPY+SGTNSVCSS
Sbjct: 121 QTPITIPEPSPTGKKKLADLFRESSRNGTDRQAKPTLNELALQSNPETPYVSGTNSVCSS 180

Query: 181 ERTSNGGDVWIEKERRFGSAQCCLPSLGSRRSFSDRRKKASPAIAV 227
           ERT N GDVW EKER FGS QCCLPSL S  SF DRRKKASPAIAV
Sbjct: 181 ERTPN-GDVWAEKERPFGSVQCCLPSLRSCHSFGDRRKKASPAIAV 219

[Close]
BLAST of Carg09672 vs. TrEMBL
Match: tr|A0A2N9F4V7|A0A2N9F4V7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10075 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.9e-57
Identity = 139/255 (54.51%), Postives = 172/255 (67.45%), Query Frame = 0 

Query: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPI-------HGGVF 60
           MGSCVS+HRNSDSA+K+RLS GSK + L IPPSPIK+N  P  G+ PI            
Sbjct: 1   MGSCVSMHRNSDSAMKYRLSFGSKEDKLVIPPSPIKEN--PTNGDRPIXXXXXXXXXXXX 60

Query: 61  VKSQSSPSH-------FGSKDEAFFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFS 120
           VKSQ SPS         GSK+E FF+S+ WL+SDCEDDFYSVNGDFTPSRGNTPV  +FS
Sbjct: 61  VKSQWSPSRSNTSFGVHGSKEETFFDSQAWLESDCEDDFYSVNGDFTPSRGNTPVHHNFS 120

Query: 121 SGTPRMNQVHVVDDLTPIAMPKPSPTG-KKKLAELFRDSSRNGTDIQ------------- 180
            GTPR+++    +D  P+++ +PSPT  KKKL+ELF++S R+  D+              
Sbjct: 121 MGTPRVSKAR-FEDRIPVSLSQPSPTDKKKKLSELFQESIRHDQDVDNQNNNLNMANGNM 180

Query: 181 -TKPTLNELALQSNPETPYMSGTNSVCSSERTSNGGDVWIEKERRFGSAQCCLPSLGSRR 227
             KPT+ +L  +S   TP+  GTNSVCSSERT N G+++ EKE+   S QCCLPSL S R
Sbjct: 181 AVKPTVLDLPPRSAHATPH--GTNSVCSSERTPN-GELYTEKEKPIRSVQCCLPSLISCR 240

[Close]
BLAST of Carg09672 vs. TrEMBL
Match: tr|A0A2I4ERR0|A0A2I4ERR0_9ROSI (uncharacterized protein At3g27210-like OS=Juglans regia OX=51240 GN=LOC108992085 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 2.0e-54
Identity = 134/251 (53.39%), Postives = 165/251 (65.74%), Query Frame = 0 

Query: 1   MGSCVSIHRNSDSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPP--IHGGVFVKSQ- 60
           MGSC S+HR+SDSA+K RLS GSK + L IPPSPIK  + P  GNPP  I+  V  KSQ 
Sbjct: 1   MGSCASLHRSSDSAMKLRLSFGSKDDKLVIPPSPIK--EIPTNGNPPIDINNVVAAKSQW 60

Query: 61  ------SSPSHFGSKDEAFFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPR 120
                 +S   +GSK+E FF+S+ WLDSDC+DDF+SVNGDFTPSRGNTPV  +FS   P+
Sbjct: 61  PASRSTASFGGYGSKEETFFDSQAWLDSDCDDDFFSVNGDFTPSRGNTPVHNNFSPRMPQ 120

Query: 121 MNQVHVVDDLTPIAMPKPSPTGKKKLAELFRDSSRNGTDI----------------QTKP 180
           +N+VH   D  P +  +PSP  KKKL ELFR+S R   D+                + KP
Sbjct: 121 VNKVHYEADRIPGSTHEPSP--KKKLIELFRESVRQDQDVDNLNTSGNQNISNGKMEVKP 180

Query: 181 TLNELALQSNPETPYMSGTNSVCSSERTSNGGDVWIEKERRFGSAQCCLPSLGSRRSFSD 227
           T+ +L  +S   TPY  GT+SVCSSERT + GD+  EKE+ F   QCCLPSL S RSFS+
Sbjct: 181 TVLDLPPKSAHGTPY--GTHSVCSSERTPS-GDLLTEKEKPFRPVQCCLPSLISCRSFSE 240

[Close]
BLAST of Carg09672 vs. TrEMBL
Match: tr|B9RBK4|B9RBK4_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1677780 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 3.7e-53
Identity = 127/244 (52.05%), Postives = 160/244 (65.57%), Query Frame = 0 

Query: 1   MGSCVSIHRNS-DSAVKFRLSNGSKPNGLPIPPSPIKDNDTPIIGNPPIHGGVFVKSQSS 60
           MGSC S+H+ + +SA+K  +S GSK + L IP SPIKD           H       ++ 
Sbjct: 1   MGSCASVHKGTPESAMKLGVSFGSKKDNLVIPESPIKDK----------HVNDHTPIKTF 60

Query: 61  PSHFGSKDEAFFESRGWLDSDCEDDFYSVNGDFTPSRGNTPVRTSFSSGTPRMNQVHVVD 120
             H GSKDE FF+SR WLDSDCEDDF+SVNGDFTPSRGNTPV  +FS GTP++N+  +  
Sbjct: 61  DDH-GSKDETFFDSRAWLDSDCEDDFFSVNGDFTPSRGNTPVHHNFSMGTPKINKTTLEG 120

Query: 121 -DLTPIAMPKPSPTGKKKLAELFRDSSRNGTD----------------IQTKPTLNELAL 180
              TP ++P+PSPTGKK+L+ELFR+S R   +                 + K T+ ++  
Sbjct: 121 RPPTPGSIPEPSPTGKKRLSELFRESLREEQEADKLDSSRMQNIGNGKTEVKQTILDVLP 180

Query: 181 QSNPETPYMSGTNSVCSSERTSNGGDVWIEKERRFGSAQCCLPSLGSRRSFSDRRKKASP 227
           +S   TPY+SG NSVCSSERT+N GD  IE+E+   SAQCCLPSL S RSFSDR+KK SP
Sbjct: 181 KSASGTPYISGANSVCSSERTAN-GDALIEREKSIKSAQCCLPSLISCRSFSDRKKKMSP 232

The following BLAST results are available for this feature:
BLAST of Carg09672 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022935009.15.5e-12598.67uncharacterized protein At3g27210 [Cucurbita moschata][more]
XP_023529186.11.6e-12498.23uncharacterized protein At3g27210-like [Cucurbita pepo subsp. pepo][more]
XP_022982708.15.1e-12396.90uncharacterized protein At3g27210-like [Cucurbita maxima][more]
XP_011651566.16.5e-9479.65PREDICTED: uncharacterized protein At3g27210-like [Cucumis sativus] >KGN58189.1 ... [more]
XP_008450086.14.2e-9379.20PREDICTED: uncharacterized protein At3g27210-like [Cucumis melo][more]
BLAST of Carg09672 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G27210.12.4e-1843.37unknown protein[more]
AT3G01860.13.5e-1744.54unknown protein[more]
AT5G40860.11.0e-1633.64unknown protein[more]
BLAST of Carg09672 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9LK32|Y3721_ARATH4.4e-1743.37Uncharacterized protein At3g27210 OS=Arabidopsis thaliana OX=3702 GN=Y-2 PE=1 SV... [more]
BLAST of Carg09672 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LB55|A0A0A0LB55_CUCSA4.3e-9479.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G588480 PE=4 SV=1[more]
tr|A0A1S3BP47|A0A1S3BP47_CUCME2.8e-9379.20uncharacterized protein At3g27210-like OS=Cucumis melo OX=3656 GN=LOC103491777 P... [more]
tr|A0A2N9F4V7|A0A2N9F4V7_FAGSY1.9e-5754.51Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10075 PE=4 SV=1[more]
tr|A0A2I4ERR0|A0A2I4ERR0_9ROSI2.0e-5453.39uncharacterized protein At3g27210-like OS=Juglans regia OX=51240 GN=LOC108992085... [more]
tr|B9RBK4|B9RBK4_RICCO3.7e-5352.05Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1677780 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR038947At3g27210-like
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg09672-RACarg09672-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..226
NoneNo IPR availablePANTHERPTHR34280:SF2SUBFAMILY NOT NAMEDcoord: 1..226
IPR038947At3g27210-likePANTHERPTHR34280FAMILY NOT NAMEDcoord: 1..226

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg09672Cla004058Watermelon (97103) v1carwmB0433
Carg09672Csa3G588480Cucumber (Chinese Long) v2carcuB0466
Carg09672MELO3C014870Melon (DHL92) v3.5.1carmeB0444
Carg09672ClCG05G013370Watermelon (Charleston Gray)carwcgB0428
Carg09672CSPI03G25650Wild cucumber (PI 183967)carcpiB0471
Carg09672Cucsa.054240Cucumber (Gy14) v1carcgyB0500
Carg09672CmaCh14G007060Cucurbita maxima (Rimu)carcmaB0607
Carg09672CmaCh11G014920Cucurbita maxima (Rimu)carcmaB0605
Carg09672CmoCh14G007250Cucurbita moschata (Rifu)carcmoB0592
Carg09672CmoCh11G016270Cucurbita moschata (Rifu)carcmoB0589
Carg09672Lsi07G014670Bottle gourd (USVL1VR-Ls)carlsiB399
Carg09672Cp4.1LG03g06940Cucurbita pepo (Zucchini)carcpeB0613
Carg09672Cp4.1LG04g05870Cucurbita pepo (Zucchini)carcpeB0614
Carg09672CsGy3G024080Cucumber (Gy14) v2carcgybB0443
Carg09672MELO3C014870.2Melon (DHL92) v3.6.1carmedB0446
Carg09672CsaV3_3G027170Cucumber (Chinese Long) v3carcucB0467
Carg09672Bhi01G001595Wax gourdcarwgoB0526
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg09672Carg15571Silver-seed gourdcarcarB397
The following block(s) are covering this gene:
GeneOrganismBlock
Carg09672Silver-seed gourdcarcarB388
Carg09672Silver-seed gourdcarcarB446
Carg09672Cucumber (Gy14) v2carcgybB0442
Carg09672Cucurbita maxima (Rimu)carcmaB0603
Carg09672Cucurbita maxima (Rimu)carcmaB0604
Carg09672Cucurbita moschata (Rifu)carcmoB0588
Carg09672Cucurbita moschata (Rifu)carcmoB0590
Carg09672Cucurbita pepo (Zucchini)carcpeB0610
Carg09672Cucumber (Chinese Long) v3carcucB0466
Carg09672Bottle gourd (USVL1VR-Ls)carlsiB397
Carg09672Melon (DHL92) v3.5.1carmeB0442
Carg09672Watermelon (Charleston Gray)carwcgB0430
Carg09672Watermelon (97103) v1carwmB0437
Carg09672Watermelon (97103) v2carwmbB0459
Carg09672Watermelon (97103) v2carwmbB0460