Cp4.1LG03g00260 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG03g00260
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Description40S ribosomal protein S5
LocationCp4.1LG03 : 1796915 .. 1798673 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTCTTCCGCAGAAATGGCTGAAGCGGTCGAAGTGACTCAGGAACTAATCCAGCCTCAATACGACGTGAAGCTTTTCAATCGCTGGACCTTTGATGATGTCCAGGTTTTATTTTTTTTCCCTAATGCCCCGTTTTTTAGACTGATGTTTGTGGGAAGCAATTTTAGGTTAACTTTAAATTTTGCTATAATGGAAGAAGCTATTGATGGATTCACCTCTCACTCATAATGATTTCACAACTTTTTGCTTATCCTTATGATGCGGAGGAGTTGAAAACTGCGATCTGTTCGTATGGTTGTTGGGTTCTTTTTGTTTCCTGTTTGAATTGGGTTGTTAGGTGAAATCTCAATGCCATCGAGTTCCACTGATATGATTGAACGGTTGTGATTATACAGGTTAATGACATGTCTCTGGGGGATTACATTGGAGTTGCACCAGCCAAGCATGCGACCTATGTTCCACACACTGCAGGTCGATATTCCATGAAGCGTTTCAGGAAAGCTCAATGCCCAATTGTGGAGAGACTTACAAATTCGCTTATGATGCATGGCAGAAACAATGGAAAGAAACTAATGGCTGTGAGGATTATTAAGCATGCGATGGAGATTATTCATCTGCTAACTGATTTGAATCCAATTCAAGTTATTGTTGATGCTGTTGTTAACAGGTATGCATATTGGATCCACGGAATTCCATTCATGTTGTGTTTAAGTTATGTTATACCATCGTAACTTTTAGGTCCAATTACAGATTTGGTATCTATGGTTTAGACAAGGTTTTAATTTAGTCTTTATGGTGTTAAAGATTCAATTTAGTCTCTATGGTTTAGACTTGGTTGCACTTTGGTATCTATGATTTGGGTTTAGTTCTAACTTTTAGTCCTTATGTTCTAAAACTTTCAATAGGATCCTACAATTTAGTCAAACCTCACAAATTGTCCTTGTTACAATGTTGACGAATATTTTCACATGAAAATTGGTAACTGTGTTTGGTTCTAACTTTTAGTGCACGACTTTATTGGACGAAATTCGTGATTTAAATATTGCATCTTGAATCAATGTCCGGAACAAAGATCATGGTAATTCTGCAATTTTTGAGTTTTCAGTTTCCTCTTAACATATTTTTTGACATGGGATTTGGCAGTGGACCCCGTGAAGATGCTACCCGAATTGGTTCAGCTGGTGTTGTTAGGCGTCAAGCTGTGGATATATCCCCTCTGCGACGTGTAAATCAAGCAATATACCTTATTACAACTGGTGCCCGTGAGGCTGCTTTCAGAAACATCAAGACTATTGCTGAATGTTTGGCTGATGAACTCATCAACGCAGCAAAGGGCTCATCAAACAGGTAAACATCATATCTCCTCTTACTAATTTTTCATCCATCCTTGCACCATATTTCATTGTGTTATTCTGTTTTTGCAGTTACGCCATCAAGAAAAAGGATGAGATTGAGAGAGTTGCAAAGGCCAATCGTTAAGCGTAGTTCGACAAAGGAGAGAGAGCTCAAAGGATTCATCAAAAGCTTCATTTTCGGTTCATCATCTAGTTCAAAGTTTCTATGGACATTGTTGTCCTCAATGTTTTGTTTGCCTTATCTTAGCCAGCGAGAATTCATCATATACTTGATTAAGCCTTAATGAGAAGTCTTTATATTTGGTGAGAATCTTTGTCATATGGATATTTGTAATACTTTAATGTTTATTTATGGTTGCTTTTCAAAATTATTACATTAAAACTCCTTATTAGTTGAGCCTCCTC

mRNA sequence

TGTCTTCCGCAGAAATGGCTGAAGCGGTCGAAGTGACTCAGGAACTAATCCAGCCTCAATACGACGTGAAGCTTTTCAATCGCTGGACCTTTGATGATGTCCAGGTTAATGACATGTCTCTGGGGGATTACATTGGAGTTGCACCAGCCAAGCATGCGACCTATGTTCCACACACTGCAGGTCGATATTCCATGAAGCGTTTCAGGAAAGCTCAATGCCCAATTGTGGAGAGACTTACAAATTCGCTTATGATGCATGGCAGAAACAATGGAAAGAAACTAATGGCTGTGAGGATTATTAAGCATGCGATGGAGATTATTCATCTGCTAACTGATTTGAATCCAATTCAAGTTATTGTTGATGCTGTTGTTAACAGTGGACCCCGTGAAGATGCTACCCGAATTGGTTCAGCTGGTGTTGTTAGGCGTCAAGCTGTGGATATATCCCCTCTGCGACGTGTAAATCAAGCAATATACCTTATTACAACTGGTGCCCGTGAGGCTGCTTTCAGAAACATCAAGACTATTGCTGAATGTTTGGCTGATGAACTCATCAACGCAGCAAAGGGCTCATCAAACAGTTACGCCATCAAGAAAAAGGATGAGATTGAGAGAGTTGCAAAGGCCAATCGTTAAGCGTAGTTCGACAAAGGAGAGAGAGCTCAAAGGATTCATCAAAAGCTTCATTTTCGGTTCATCATCTAGTTCAAAGTTTCTATGGACATTGTTGTCCTCAATGTTTTGTTTGCCTTATCTTAGCCAGCGAGAATTCATCATATACTTGATTAAGCCTTAATGAGAAGTCTTTATATTTGGTGAGAATCTTTGTCATATGGATATTTGTAATACTTTAATGTTTATTTATGGTTGCTTTTCAAAATTATTACATTAAAACTCCTTATTAGTTGAGCCTCCTC

Coding sequence (CDS)

ATGGCTGAAGCGGTCGAAGTGACTCAGGAACTAATCCAGCCTCAATACGACGTGAAGCTTTTCAATCGCTGGACCTTTGATGATGTCCAGGTTAATGACATGTCTCTGGGGGATTACATTGGAGTTGCACCAGCCAAGCATGCGACCTATGTTCCACACACTGCAGGTCGATATTCCATGAAGCGTTTCAGGAAAGCTCAATGCCCAATTGTGGAGAGACTTACAAATTCGCTTATGATGCATGGCAGAAACAATGGAAAGAAACTAATGGCTGTGAGGATTATTAAGCATGCGATGGAGATTATTCATCTGCTAACTGATTTGAATCCAATTCAAGTTATTGTTGATGCTGTTGTTAACAGTGGACCCCGTGAAGATGCTACCCGAATTGGTTCAGCTGGTGTTGTTAGGCGTCAAGCTGTGGATATATCCCCTCTGCGACGTGTAAATCAAGCAATATACCTTATTACAACTGGTGCCCGTGAGGCTGCTTTCAGAAACATCAAGACTATTGCTGAATGTTTGGCTGATGAACTCATCAACGCAGCAAAGGGCTCATCAAACAGTTACGCCATCAAGAAAAAGGATGAGATTGAGAGAGTTGCAAAGGCCAATCGTTAA

Protein sequence

MAEAVEVTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSMKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR
Homology
[Close]
BLAST of Cp4.1LG03g00260 vs. Swiss-Prot
Match: RS5_CICAR (40S ribosomal protein S5 (Fragment) OS=Cicer arietinum GN=RPS5 PE=2 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 3.3e-96
Identity = 179/192 (93.23%), Postives = 188/192 (97.92%), Query Frame = 1 

Query: 15  QYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSMKRFRKAQCPIVERL 74
           Q +VKLFNRW+FDDVQ++D+SL DYIGV P+KHATYVPHTAGRYS+KRFRKAQCPIVERL
Sbjct: 6   QIEVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERL 65

Query: 75  TNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAG 134
           TNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTD NPIQVIVDAVVNSGPREDATRIGSAG
Sbjct: 66  TNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAG 125

Query: 135 VVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKK 194
           VVRRQAVDISPLRRVNQAIYL+TTGAREAAFRNIK+IAECLADELINAAKGSSNSYAIKK
Sbjct: 126 VVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSNSYAIKK 185

Query: 195 KDEIERVAKANR 207
           KDEIERVAKANR
Sbjct: 186 KDEIERVAKANR 197

[Close]
BLAST of Cp4.1LG03g00260 vs. Swiss-Prot
Match: RS51_ARATH (40S ribosomal protein S5-1 OS=Arabidopsis thaliana GN=RPS5A PE=1 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 9.5e-96
Identity = 179/207 (86.47%), Postives = 194/207 (93.72%), Query Frame = 1 

Query: 1   MAEAVEVTQELIQP-QYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYS 60
           MA + E+  E+ Q    +VKLFNRW+FDDV V D+SL DYIGV P+KHAT+VPHTAGRYS
Sbjct: 1   MAASAEIDAEIQQQLTNEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 60

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Cp4.1LG03g00260 vs. Swiss-Prot
Match: RS52_ARATH (40S ribosomal protein S5-2 OS=Arabidopsis thaliana GN=RPS5B PE=1 SV=2)

HSP 1 Score: 350.1 bits (897), Expect = 1.6e-95
Identity = 181/207 (87.44%), Postives = 193/207 (93.24%), Query Frame = 1 

Query: 1   MAEAVEVTQELIQP-QYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYS 60
           MA A +V  E+ Q    +VKLFNRWT+DDV V D+SL DYIGV  AKHAT+VPHTAGRYS
Sbjct: 1   MATAADVDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 60

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LITTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Cp4.1LG03g00260 vs. Swiss-Prot
Match: RS5_BOVIN (40S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=2 SV=3)

HSP 1 Score: 307.8 bits (787), Expect = 9.2e-83
Identity = 152/190 (80.00%), Postives = 174/190 (91.58%), Query Frame = 1 

Query: 17  DVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSMKRFRKAQCPIVERLTN 76
           D+KLF +W+ DDVQ+ND+SL DYI V   K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 16  DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAAKRFRKAQCPIVERLTN 75

Query: 77  SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVV 136
           S+MMHGRNNGKKLM VRI+KHA EIIHLLT  NP+QV+V+A++NSGPRED+TRIG AG V
Sbjct: 76  SMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTV 135

Query: 137 RRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 196
           RRQAVD+SPLRRVNQAI+L+ TGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD
Sbjct: 136 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 195

Query: 197 EIERVAKANR 207
           E+ERVAK+NR
Sbjct: 196 ELERVAKSNR 204

[Close]
BLAST of Cp4.1LG03g00260 vs. Swiss-Prot
Match: RS5_HUMAN (40S ribosomal protein S5 OS=Homo sapiens GN=RPS5 PE=1 SV=4)

HSP 1 Score: 307.8 bits (787), Expect = 9.2e-83
Identity = 152/190 (80.00%), Postives = 174/190 (91.58%), Query Frame = 1 

Query: 17  DVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSMKRFRKAQCPIVERLTN 76
           D+KLF +W+ DDVQ+ND+SL DYI V   K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 16  DIKLFGKWSTDDVQINDISLQDYIAVKE-KYAKYLPHSAGRYAAKRFRKAQCPIVERLTN 75

Query: 77  SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVV 136
           S+MMHGRNNGKKLM VRI+KHA EIIHLLT  NP+QV+V+A++NSGPRED+TRIG AG V
Sbjct: 76  SMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTV 135

Query: 137 RRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 196
           RRQAVD+SPLRRVNQAI+L+ TGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD
Sbjct: 136 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 195

Query: 197 EIERVAKANR 207
           E+ERVAK+NR
Sbjct: 196 ELERVAKSNR 204

[Close]
BLAST of Cp4.1LG03g00260 vs. TrEMBL
Match: A0A0A0KSZ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G292230 PE=3 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 1.4e-101
Identity = 191/200 (95.50%), Postives = 197/200 (98.50%), Query Frame = 1 

Query: 7   VTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSMKRFRKA 66
           V QELIQP +DVKLFNRWTFDDVQVND+SL DY+GVAPAKHATYVPHTAGRYS+KRFRKA
Sbjct: 8   VNQELIQPHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYSVKRFRKA 67

Query: 67  QCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPRED 126
           QCPI+ERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPRED
Sbjct: 68  QCPIIERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPRED 127

Query: 127 ATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELINAAKGS 186
           ATRIGSAGVVRRQAVDISPLRRVNQAIYL+TTGAREAAFRNIKTIAECLADELINAAKGS
Sbjct: 128 ATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGS 187

Query: 187 SNSYAIKKKDEIERVAKANR 207
           SNSYAIKKKDEIERVAKANR
Sbjct: 188 SNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Cp4.1LG03g00260 vs. TrEMBL
Match: A0A0A0K5K0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G232530 PE=3 SV=1)

HSP 1 Score: 372.1 bits (954), Expect = 4.4e-100
Identity = 189/200 (94.50%), Postives = 195/200 (97.50%), Query Frame = 1 

Query: 7   VTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSMKRFRKA 66
           V QEL Q  +DVKLFNRWTFDDVQVND+SL DY+GVAPAKHATYVPHTAGRYS+KRFRKA
Sbjct: 8   VNQELTQSHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYSVKRFRKA 67

Query: 67  QCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPRED 126
           QCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNP+QVIVDAVVNSGPRED
Sbjct: 68  QCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPVQVIVDAVVNSGPRED 127

Query: 127 ATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELINAAKGS 186
           ATRIGSAGVVRRQAVDISPLRRVNQAIYL+TTGAREAAFRNIKTIAECLADELINAAKGS
Sbjct: 128 ATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGS 187

Query: 187 SNSYAIKKKDEIERVAKANR 207
           SNSYAIKKKDEIERVAKANR
Sbjct: 188 SNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Cp4.1LG03g00260 vs. TrEMBL
Match: A0A0A0LVI4_CUCSA (40S ribosomal protein S5 OS=Cucumis sativus GN=Csa_1G168900 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.3e-99
Identity = 192/207 (92.75%), Postives = 199/207 (96.14%), Query Frame = 1 

Query: 1   MAEAVEV-TQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYS 60
           MA  V+V +QEL Q  +DVKLFNRWTFDDVQVND+SL DY+GVAPAKHATYVPHTAGRYS
Sbjct: 1   MAVEVDVASQELTQSHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYS 60

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVER TNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERRTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYL+TTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Cp4.1LG03g00260 vs. TrEMBL
Match: A0A0A0LRZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373440 PE=3 SV=1)

HSP 1 Score: 369.4 bits (947), Expect = 2.9e-99
Identity = 188/200 (94.00%), Postives = 194/200 (97.00%), Query Frame = 1 

Query: 7   VTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSMKRFRKA 66
           V QEL  P +DVKLFNRWTFDDVQVND+SL DY+GVAPAKHATYVPHTAGRYS+KRFRKA
Sbjct: 85  VNQELTLPHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYSVKRFRKA 144

Query: 67  QCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPRED 126
           QCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLN +QVIVDAVVNSGPRED
Sbjct: 145 QCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNTVQVIVDAVVNSGPRED 204

Query: 127 ATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELINAAKGS 186
           ATRIGSAGVVRRQAVDISPLRRVNQAIYL+TTGAREAAFRNIKTIAECLADELINAAKGS
Sbjct: 205 ATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGS 264

Query: 187 SNSYAIKKKDEIERVAKANR 207
           SNSYAIKKKDEIERVAKANR
Sbjct: 265 SNSYAIKKKDEIERVAKANR 284

[Close]
BLAST of Cp4.1LG03g00260 vs. TrEMBL
Match: W9RQK6_9ROSA (40S ribosomal protein S5 OS=Morus notabilis GN=L484_012437 PE=3 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 3.2e-98
Identity = 184/198 (92.93%), Postives = 193/198 (97.47%), Query Frame = 1 

Query: 9   QELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSMKRFRKAQC 68
           Q+  QP +DVKLFNRW+FDDVQVND+SL DYIGV PAKHATYVPHTAGRYS+KRFRKAQC
Sbjct: 7   QDPSQPHFDVKLFNRWSFDDVQVNDISLADYIGVVPAKHATYVPHTAGRYSVKRFRKAQC 66

Query: 69  PIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPREDAT 128
           PIVERLTNSLMMHGRNNGKKLMAVRI++HAMEIIHLLTDLNPIQVIVDAVVNSGPREDAT
Sbjct: 67  PIVERLTNSLMMHGRNNGKKLMAVRIVRHAMEIIHLLTDLNPIQVIVDAVVNSGPREDAT 126

Query: 129 RIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELINAAKGSSN 188
           RIGSAGVVRRQAVDISPLRRVNQAIYL+TTGARE+AFRNIKTIAECLADELINAAKGSSN
Sbjct: 127 RIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSN 186

Query: 189 SYAIKKKDEIERVAKANR 207
           SYAIKKKDEIERVAKANR
Sbjct: 187 SYAIKKKDEIERVAKANR 204

[Close]
BLAST of Cp4.1LG03g00260 vs. TAIR10
Match: AT2G37270.1 (AT2G37270.1 ribosomal protein 5B)

HSP 1 Score: 350.9 bits (899), Expect = 5.3e-97
Identity = 179/207 (86.47%), Postives = 194/207 (93.72%), Query Frame = 1 

Query: 1   MAEAVEVTQELIQP-QYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYS 60
           MA + E+  E+ Q    +VKLFNRW+FDDV V D+SL DYIGV P+KHAT+VPHTAGRYS
Sbjct: 1   MAASAEIDAEIQQQLTNEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 60

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Cp4.1LG03g00260 vs. TAIR10
Match: AT3G11940.1 (AT3G11940.1 ribosomal protein 5A)

HSP 1 Score: 350.1 bits (897), Expect = 9.1e-97
Identity = 181/207 (87.44%), Postives = 193/207 (93.24%), Query Frame = 1 

Query: 1   MAEAVEVTQELIQP-QYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYS 60
           MA A +V  E+ Q    +VKLFNRWT+DDV V D+SL DYIGV  AKHAT+VPHTAGRYS
Sbjct: 1   MATAADVDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 60

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KHAMEIIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LITTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Cp4.1LG03g00260 vs. TAIR10
Match: ATCG01240.1 (ATCG01240.1 ribosomal protein S7)

HSP 1 Score: 55.1 bits (131), Expect = 6.1e-08
Identity = 47/136 (34.56%), Postives = 74/136 (54.41%), Query Frame = 1 

Query: 73  RLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGP--REDATRI 132
           RL N L+     +GKK +A +II  A++ I   T+ NP+ V+  A+    P     A R+
Sbjct: 21  RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80

Query: 133 GSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELINAAKGSSNSY 192
           G  G   +  ++I   +    AI  +   +R+   RN   +A  L+ EL++AAKGS +  
Sbjct: 81  G--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD-- 140

Query: 193 AIKKKDEIERVAKANR 207
           AI+KK+E  R+A+ANR
Sbjct: 141 AIRKKEETHRMAEANR 149

[Close]
BLAST of Cp4.1LG03g00260 vs. TAIR10
Match: ATCG00900.1 (ATCG00900.1 Ribosomal protein S7p/S5e family protein)

HSP 1 Score: 55.1 bits (131), Expect = 6.1e-08
Identity = 47/136 (34.56%), Postives = 74/136 (54.41%), Query Frame = 1 

Query: 73  RLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGP--REDATRI 132
           RL N L+     +GKK +A +II  A++ I   T+ NP+ V+  A+    P     A R+
Sbjct: 21  RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80

Query: 133 GSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELINAAKGSSNSY 192
           G  G   +  ++I   +    AI  +   +R+   RN   +A  L+ EL++AAKGS +  
Sbjct: 81  G--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD-- 140

Query: 193 AIKKKDEIERVAKANR 207
           AI+KK+E  R+A+ANR
Sbjct: 141 AIRKKEETHRMAEANR 149

[Close]
BLAST of Cp4.1LG03g00260 vs. NCBI nr
Match: gi|449445316|ref|XP_004140419.1| (PREDICTED: 40S ribosomal protein S5 [Cucumis sativus])

HSP 1 Score: 377.1 bits (967), Expect = 2.0e-101
Identity = 191/200 (95.50%), Postives = 197/200 (98.50%), Query Frame = 1 

Query: 7   VTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSMKRFRKA 66
           V QELIQP +DVKLFNRWTFDDVQVND+SL DY+GVAPAKHATYVPHTAGRYS+KRFRKA
Sbjct: 8   VNQELIQPHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYSVKRFRKA 67

Query: 67  QCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPRED 126
           QCPI+ERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPRED
Sbjct: 68  QCPIIERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPRED 127

Query: 127 ATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELINAAKGS 186
           ATRIGSAGVVRRQAVDISPLRRVNQAIYL+TTGAREAAFRNIKTIAECLADELINAAKGS
Sbjct: 128 ATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGS 187

Query: 187 SNSYAIKKKDEIERVAKANR 207
           SNSYAIKKKDEIERVAKANR
Sbjct: 188 SNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Cp4.1LG03g00260 vs. NCBI nr
Match: gi|659092671|ref|XP_008447165.1| (PREDICTED: 40S ribosomal protein S5-like isoform X2 [Cucumis melo])

HSP 1 Score: 375.9 bits (964), Expect = 4.4e-101
Identity = 192/200 (96.00%), Postives = 196/200 (98.00%), Query Frame = 1 

Query: 7   VTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSMKRFRKA 66
           V QEL QP +DVKLFNRWTFDDVQVND+SL DYIGVAPAKHATYVPHTAGRYS+KRFRKA
Sbjct: 8   VNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYSVKRFRKA 67

Query: 67  QCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPRED 126
           QCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPRED
Sbjct: 68  QCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPRED 127

Query: 127 ATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELINAAKGS 186
           ATRIGSAGVVRRQAVDISPLRRVNQAIYL+TTGAREAAFRNIKTIAECLADELINAAKGS
Sbjct: 128 ATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGS 187

Query: 187 SNSYAIKKKDEIERVAKANR 207
           SNSYAIKKKDEIERVAKANR
Sbjct: 188 SNSYAIKKKDEIERVAKANR 207

[Close]
BLAST of Cp4.1LG03g00260 vs. NCBI nr
Match: gi|659114009|ref|XP_008456864.1| (PREDICTED: 40S ribosomal protein S5-like [Cucumis melo])

HSP 1 Score: 375.9 bits (964), Expect = 4.4e-101
Identity = 192/200 (96.00%), Postives = 196/200 (98.00%), Query Frame = 1 

Query: 7   VTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSMKRFRKA 66
           V QEL QP +DVKLFNRWTFDDVQVND+SL DYIGVAPAKHATYVPHTAGRYS+KRFRKA
Sbjct: 54  VNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYSVKRFRKA 113

Query: 67  QCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPRED 126
           QCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPRED
Sbjct: 114 QCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPRED 173

Query: 127 ATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELINAAKGS 186
           ATRIGSAGVVRRQAVDISPLRRVNQAIYL+TTGAREAAFRNIKTIAECLADELINAAKGS
Sbjct: 174 ATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGS 233

Query: 187 SNSYAIKKKDEIERVAKANR 207
           SNSYAIKKKDEIERVAKANR
Sbjct: 234 SNSYAIKKKDEIERVAKANR 253

[Close]
BLAST of Cp4.1LG03g00260 vs. NCBI nr
Match: gi|659092669|ref|XP_008447164.1| (PREDICTED: 40S ribosomal protein S5-like isoform X1 [Cucumis melo])

HSP 1 Score: 375.9 bits (964), Expect = 4.4e-101
Identity = 192/200 (96.00%), Postives = 196/200 (98.00%), Query Frame = 1 

Query: 7   VTQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYSMKRFRKA 66
           V QEL QP +DVKLFNRWTFDDVQVND+SL DYIGVAPAKHATYVPHTAGRYS+KRFRKA
Sbjct: 21  VNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYSVKRFRKA 80

Query: 67  QCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPRED 126
           QCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPRED
Sbjct: 81  QCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVVNSGPRED 140

Query: 127 ATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADELINAAKGS 186
           ATRIGSAGVVRRQAVDISPLRRVNQAIYL+TTGAREAAFRNIKTIAECLADELINAAKGS
Sbjct: 141 ATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGS 200

Query: 187 SNSYAIKKKDEIERVAKANR 207
           SNSYAIKKKDEIERVAKANR
Sbjct: 201 SNSYAIKKKDEIERVAKANR 220

[Close]
BLAST of Cp4.1LG03g00260 vs. NCBI nr
Match: gi|659127319|ref|XP_008463640.1| (PREDICTED: 40S ribosomal protein S5 [Cucumis melo])

HSP 1 Score: 373.2 bits (957), Expect = 2.8e-100
Identity = 194/207 (93.72%), Postives = 200/207 (96.62%), Query Frame = 1 

Query: 1   MAEAVEV-TQELIQPQYDVKLFNRWTFDDVQVNDMSLGDYIGVAPAKHATYVPHTAGRYS 60
           MA  V+V +QEL Q  +DVKLFNRWTFDDVQVND+SL DYIGVAPAKHATYVPHTAGRYS
Sbjct: 1   MAVEVDVASQELTQSHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLITTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYL+TTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207
           INAAKGSSNSYAIKKKDEIERVAKANR
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKANR 207

The following BLAST results are available for this feature:
BLAST of Cp4.1LG03g00260 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RS5_CICAR3.3e-9693.2340S ribosomal protein S5 (Fragment) OS=Cicer arietinum GN=RPS5 PE=2 SV=1[more]
RS51_ARATH9.5e-9686.4740S ribosomal protein S5-1 OS=Arabidopsis thaliana GN=RPS5A PE=1 SV=1[more]
RS52_ARATH1.6e-9587.4440S ribosomal protein S5-2 OS=Arabidopsis thaliana GN=RPS5B PE=1 SV=2[more]
RS5_BOVIN9.2e-8380.0040S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=2 SV=3[more]
RS5_HUMAN9.2e-8380.0040S ribosomal protein S5 OS=Homo sapiens GN=RPS5 PE=1 SV=4[more]
BLAST of Cp4.1LG03g00260 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSZ1_CUCSA1.4e-10195.50Uncharacterized protein OS=Cucumis sativus GN=Csa_5G292230 PE=3 SV=1[more]
A0A0A0K5K0_CUCSA4.4e-10094.50Uncharacterized protein OS=Cucumis sativus GN=Csa_7G232530 PE=3 SV=1[more]
A0A0A0LVI4_CUCSA1.3e-9992.7540S ribosomal protein S5 OS=Cucumis sativus GN=Csa_1G168900 PE=4 SV=1[more]
A0A0A0LRZ5_CUCSA2.9e-9994.00Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373440 PE=3 SV=1[more]
W9RQK6_9ROSA3.2e-9892.9340S ribosomal protein S5 OS=Morus notabilis GN=L484_012437 PE=3 SV=1[more]
BLAST of Cp4.1LG03g00260 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G37270.15.3e-9786.47 ribosomal protein 5B[more]
AT3G11940.19.1e-9787.44 ribosomal protein 5A[more]
ATCG01240.16.1e-0834.56ATCG01240.1 ribosomal protein S7[more]
ATCG00900.16.1e-0834.56ATCG00900.1 Ribosomal protein S7p/S5e family protein[more]
BLAST of Cp4.1LG03g00260 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445316|ref|XP_004140419.1|2.0e-10195.50PREDICTED: 40S ribosomal protein S5 [Cucumis sativus][more]
gi|659092671|ref|XP_008447165.1|4.4e-10196.00PREDICTED: 40S ribosomal protein S5-like isoform X2 [Cucumis melo][more]
gi|659114009|ref|XP_008456864.1|4.4e-10196.00PREDICTED: 40S ribosomal protein S5-like [Cucumis melo][more]
gi|659092669|ref|XP_008447164.1|4.4e-10196.00PREDICTED: 40S ribosomal protein S5-like isoform X1 [Cucumis melo][more]
gi|659127319|ref|XP_008463640.1|2.8e-10093.72PREDICTED: 40S ribosomal protein S5 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003735structural constituent of ribosome
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: INTERPRO
TermDefinition
IPR023798Ribosomal_S7_dom
IPR020606Ribosomal_S7_CS
IPR005716Ribosomal_S5/S7_euk/arc
IPR000235Ribosomal_S5/S7
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG03g00260.1Cp4.1LG03g00260.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000235Ribosomal protein S5/S7PIRPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 1..206
score: 4.8
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 2..206
score: 7.7E
IPR005716Ribosomal protein S5/S7, eukaryotic/archaealTIGRFAMsTIGR01028TIGR01028coord: 18..206
score: 1.4
IPR020606Ribosomal protein S7, conserved sitePROSITEPS00052RIBOSOMAL_S7coord: 72..98
scor
IPR023798Ribosomal protein S7 domainGENE3DG3DSA:1.10.455.10coord: 18..206
score: 5.3
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 63..206
score: 1.3
IPR023798Ribosomal protein S7 domainunknownSSF47973Ribosomal protein S7coord: 19..206
score: 1.09
NoneNo IPR availablePANTHERPTHR11205:SF2440S RIBOSOMAL PROTEIN S5-1-RELATEDcoord: 2..206
score: 7.7E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG03g00260CmaCh14G003910Cucurbita maxima (Rimu)cmacpeB283
Cp4.1LG03g00260CmaCh06G005610Cucurbita maxima (Rimu)cmacpeB830
Cp4.1LG03g00260CmoCh14G003920Cucurbita moschata (Rifu)cmocpeB245
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG03g00260Cp4.1LG08g09370Cucurbita pepo (Zucchini)cpecpeB487
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG03g00260Cucumber (Gy14) v1cgycpeB0644
Cp4.1LG03g00260Cucurbita moschata (Rifu)cmocpeB783
Cp4.1LG03g00260Wild cucumber (PI 183967)cpecpiB599
Cp4.1LG03g00260Cucumber (Chinese Long) v2cpecuB597
Cp4.1LG03g00260Bottle gourd (USVL1VR-Ls)cpelsiB503
Cp4.1LG03g00260Watermelon (Charleston Gray)cpewcgB546
Cp4.1LG03g00260Melon (DHL92) v3.6.1cpemedB678
Cp4.1LG03g00260Watermelon (97103) v1cpewmB597
Cp4.1LG03g00260Melon (DHL92) v3.5.1cpemeB571
Cp4.1LG03g00260Cucumber (Gy14) v2cgybcpeB395
Cp4.1LG03g00260Silver-seed gourdcarcpeB0353
Cp4.1LG03g00260Silver-seed gourdcarcpeB0956
Cp4.1LG03g00260Cucumber (Chinese Long) v3cpecucB0747
Cp4.1LG03g00260Wax gourdcpewgoB0745