CmaCh06G005610 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh06G005610
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionRibosomal protein S5 component of cytosolic 80S ribosome and 40S small subunit
LocationCma_Chr06 : 2697212 .. 2700754 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCGTTAAAAATGTCCCCTCTCCACCCTAGCCGCCGATCCGAGCTTTTGCCCTCCTGGTTTTCATTTGCTCGTCTCCCTTCCAAGTAAGTTTCTTCTTAATCACTCTCCAATCTACTTCTTCGTCTCCTTATCTCCGCCATAAATGTCGTCGACCCCTGTGTTTTTCCGTCTTGGTTTCTATTTTCTGTGGAAAATTGCTTTTGTTTCTGCTTTGCGGCAATGGCTCTTGCAGTTTAGCCCTAGGGTTTTAGTGCAGGTGTCTGTTTTCTGATTGCTCTCTGAACTATGTACCATTATTGATTTAAATCTCTTTTTTTGTTTATTTAGTTGAGTGGTTGTGTTGTTATTGTTATTTGGATGTTTTTGTACTGTTGATTATCAAATGTAGCTAAGATTTAAGGATTTAAGAACTCAGACGTTCCATTTTTTAATCTACTTTGACTTGAGGTTTCTGTGTCACCTCTTGGTATTGATGTTTGCACGAACTCTTAGATTCTTTTTTCTGGGAATAATTTTGTTCGTCTTCTTTCTTTGGGTGCTGCATTCTGTTCGCTTTATTCTTTAGGATTAGGATTTATCGGAACACTAGTGAACTTTGGTTCTATTCCTCCTTTTAAATCTGACTCATGACTTTGTTTTCCATAGAAATGGCTGAAGCGGTCGAAGTGGTTCAGGAACTTATCCAACCTCACCATGACGTGAAGCTTTTTAATCGCTGGACCTTTGATGATGTCCAGGTTTCAACTTTCTTTCCCAATGCGCTGTTTCTTAGACTGATGTTTGTGGGATGCAATTTTGGGTTAAATTTAACATTACGTATGATGGAAAAAAAGCTTTTACTATTGGTGGATTCATTTCACTCACGTTGATTTCATTGTCTTCCGTGTTATAAATGAGATTAAAGTCTGAGAACAACTTTTTGCCAATCTGTCTTAGATGGCTATTATGTGAAGGTGTTGGTAATTACAATTATTTTCTGTAGAAGTGTTGTTGTTAGGTTCTAACCAATCTGCTTGAAGTTGGTTGGTTTGCTGAAAACACTACGCATCGAGTTATGATTGTTATTATCGTTGGGTTTATTCAGGTTAATGACATGTCTCTGGGGGATTACATTGGAGTTGCACCTTCCAAGCATGCAACCTATGTTCCACACACTGCTGGCCGATACTCTATGAAGCGTTTCAGGAAAGCTCAATGCCCAATTGTTGAGAGACTTACTAACTCACTTATGATGCACGGCAGAAACAATGGGAAGAAACTAATGGCTGTGAGGATTATTAAGCACACTATGGAGATTATCCATCTGCTAACTGATCTAAATCCAATTCAAGTTATTGTCGATGCTGTTGTTAACAGGTATGCATATTTGATCCACTGAATTCCTCTCATGTCGCATGTCAGCTGTGCTATGTCGTTACAATATTGACAAATACTTCTCATGAGGTGATTTCTACATGGGTAAATGTGATTAGTTTATTGTATTAGAGTTTGAAGTTAATTTAAAAGATAAGTAAATTCGCCAAAATTTATGAGGTTTAACAAGATCATATCAATAAAATTGAAACTAAGACTAAACCATGAAAGATTAAATTGGATATTTTTCAACCGTAGGAACCAAGTTGTATAATTTAACCTGACTTTTACTATAATGTGGATGTTCATTCCTCTGCTTTTAGAAGAAATTTGTTACGTGATTTATTGGATTACTTCCTGATTAGTATTATATCGAGGTCAATGACCCGAGGAAAGATTGTGGTCATGCTGCAATGTTTGAGTTATGAGGGTCTCTTTAACAATTTTTGGACATGGGACTTTGCAGTGGACCCCGAGAAGATGCCACTCGAATTGGTTCAGCTGGTGTTGTTAGGCGTCAAGCTGTGGATATATCCCCTCTGCGACGCGTAAATCAAGCAATATACCTTCTTACAACCGGTGCTCGTGAGGCTGCTTTCAGAAACATCAAGACAATAGCAGAATGTTTGGCTGATGAACTCATCAACGCCGCAAAGGGTTCATCAAACAGGTACATATTACAACATCTCATACTAAATTATCATCCATCCACCCTTGCACAGTATGTCATTGCGTTTTTTCTATTCTTGCAGTTACGCTATTAAGAAAAAGGATGAGATTGAGAGAGTTGCCAAGGCCAATCGTTAAGAAGGGCAGTTGGGGAAAAGAGAGAGCTCAAAGGTTCGACAAGAGCTTCGTTTTTGTTCTTTGCCAATGCTCATCTGACATTCTTCTAATTCTAAGTTTCTGTAGACATGGTTGCCTTCAATGTTTTGTTTCTTTTGAATTCATCCAATACTTGATTAAGCTTTAAGGTGTCCTCGTATGGCTGCATGTGCTTTTGACCATGATTTTGTAAACAGTTGAGGATTTATCAGAATATTTTGAAGAATTTGATGTTTTATTTGATGGATGGTCTTTATAAGTTCGTAATTCCCTCATTATTATCCTCAAAACTTGATTGCTTTAAACTCTAAGCCTCCATCATACTCTTAAAAGTTTCTTTTTCCTATTGTAAAATTTCATGTGTTCTTTTTAGGTTTTTAGGTTGATGTTATTATCCTGCTAGTTATCTATTTGACCTAATAAGCTCGACATGCACATATACGTTCTTTGACACGAGGTCCACGTGTCTTCTAATTACTTGGCTTAGTTCTTATCCGGCTAGTTATCTGTTTGGCCTAATAAGCTTGACATGCTCTTTATATTTTATTCGACACGAGGTCCATGTGTCTTCTAATTACTTGGCTTAGTTCTTATCTCAACATGCTCTTTAATATATTTTCTTCGACACAAGGTCCACGTGCCTTCTAATTACTTGGCTTAGTTCTTATCAGGCTAGTTATTTGTTTGACCCAATAAGCTCAACATGCTCTTTAATATATTTTCTTCGACACGAGGTCCACGTGTCTTCTAATTACTTGGCTTAGTTCTTATCCGGCTAGTTATCTGTTTGGCCTAATAAGCTTGACATGCTCTTTATATTTTATTCGACACGAGGTCCATGTGTCTTCTAATTACTTGGCTTAGTTCTTATCTCAACATGCTCTTTAATATATTTTCTTCGACACAAGGTCCACGTGCCTTCTAATTACTTGGCTTAGTTCTTATCAGGCTAGTTATTTGTTTGACCCAATAAGCTCAACATGCTCTTTAATATATTTTCTTCGACACAAGGTCCACGTGCCTTCTAATTACTTGGCTTAGTTCTTATCAGGCTAGTTATTTGTTTGACCCAATAAGCTCAACATGCTCTTTAATATATTTTCTTCGACACGAGGTCCACGTGTCTTCTAATTACTTGGCTTAGTTCTTATCATGCTAGTTATTTGTTTGGCCTAATAAGCTCGACATGCTCTTTAATATATTTTCTTCGATATGAGGTCCATGTGTCTTCTAATTACATGGCTTAGTTCTTATCAGGCTAGTTATCTGTTTGCTCTAATAAGCTCGACCTTTGACACAAGGTCCACATGTTTTTTTGATTACTCAATTTAGTTCTTATTAAGTTAGTTATCTATTTGGCCTAA

mRNA sequence

CCCGTTAAAAATGTCCCCTCTCCACCCTAGCCGCCGATCCGAGCTTTTGCCCTCCTGGTTTTCATTTGCTCGTCTCCCTTCCAAAAATGGCTGAAGCGGTCGAAGTGGTTCAGGAACTTATCCAACCTCACCATGACGTGAAGCTTTTTAATCGCTGGACCTTTGATGATGTCCAGGTTAATGACATGTCTCTGGGGGATTACATTGGAGTTGCACCTTCCAAGCATGCAACCTATGTTCCACACACTGCTGGCCGATACTCTATGAAGCGTTTCAGGAAAGCTCAATGCCCAATTGTTGAGAGACTTACTAACTCACTTATGATGCACGGCAGAAACAATGGGAAGAAACTAATGGCTGTGAGGATTATTAAGCACACTATGGAGATTATCCATCTGCTAACTGATCTAAATCCAATTCAAGTTATTGTCGATGCTGTTGTTAACAGTGGACCCCGAGAAGATGCCACTCGAATTGGTTCAGCTGGTGTTGTTAGGCGTCAAGCTGTGGATATATCCCCTCTGCGACGCGTAAATCAAGCAATATACCTTCTTACAACCGGTGCTCGTGAGGCTGCTTTCAGAAACATCAAGACAATAGCAGAATGTTTGGCTGATGAACTCATCAACGCCGCAAAGGGTTCATCAAACAGTTACGCTATTAAGAAAAAGGATGAGATTGAGAGAGTTGCCAAGGCCAATCTTATCTATTTGGCCTAA

Coding sequence (CDS)

ATGGCTGAAGCGGTCGAAGTGGTTCAGGAACTTATCCAACCTCACCATGACGTGAAGCTTTTTAATCGCTGGACCTTTGATGATGTCCAGGTTAATGACATGTCTCTGGGGGATTACATTGGAGTTGCACCTTCCAAGCATGCAACCTATGTTCCACACACTGCTGGCCGATACTCTATGAAGCGTTTCAGGAAAGCTCAATGCCCAATTGTTGAGAGACTTACTAACTCACTTATGATGCACGGCAGAAACAATGGGAAGAAACTAATGGCTGTGAGGATTATTAAGCACACTATGGAGATTATCCATCTGCTAACTGATCTAAATCCAATTCAAGTTATTGTCGATGCTGTTGTTAACAGTGGACCCCGAGAAGATGCCACTCGAATTGGTTCAGCTGGTGTTGTTAGGCGTCAAGCTGTGGATATATCCCCTCTGCGACGCGTAAATCAAGCAATATACCTTCTTACAACCGGTGCTCGTGAGGCTGCTTTCAGAAACATCAAGACAATAGCAGAATGTTTGGCTGATGAACTCATCAACGCCGCAAAGGGTTCATCAAACAGTTACGCTATTAAGAAAAAGGATGAGATTGAGAGAGTTGCCAAGGCCAATCTTATCTATTTGGCCTAA

Protein sequence

MAEAVEVVQELIQPHHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYSMKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANLIYLA
Homology
[Close]
BLAST of CmaCh06G005610 vs. Swiss-Prot
Match: RS5_CICAR (40S ribosomal protein S5 (Fragment) OS=Cicer arietinum GN=RPS5 PE=2 SV=1)

HSP 1 Score: 350.9 bits (899), Expect = 9.7e-96
Identity = 178/189 (94.18%), Postives = 185/189 (97.88%), Query Frame = 1 

Query: 17  DVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYSMKRFRKAQCPIVERLTN 76
           +VKLFNRW+FDDVQ++D+SL DYIGV PSKHATYVPHTAGRYS+KRFRKAQCPIVERLTN
Sbjct: 8   EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67

Query: 77  SLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVV 136
           SLMMHGRNNGKKLMAVRIIKH MEIIHLLTD NPIQVIVDAVVNSGPREDATRIGSAGVV
Sbjct: 68  SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVV 127

Query: 137 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 196
           RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIK+IAECLADELINAAKGSSNSYAIKKKD
Sbjct: 128 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSNSYAIKKKD 187

Query: 197 EIERVAKAN 206
           EIERVAKAN
Sbjct: 188 EIERVAKAN 196

[Close]
BLAST of CmaCh06G005610 vs. Swiss-Prot
Match: RS51_ARATH (40S ribosomal protein S5-1 OS=Arabidopsis thaliana GN=RPS5A PE=1 SV=1)

HSP 1 Score: 350.5 bits (898), Expect = 1.3e-95
Identity = 179/206 (86.89%), Postives = 193/206 (93.69%), Query Frame = 1 

Query: 1   MAEAVEVVQELIQP-HHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYS 60
           MA + E+  E+ Q   ++VKLFNRW+FDDV V D+SL DYIGV PSKHAT+VPHTAGRYS
Sbjct: 1   MAASAEIDAEIQQQLTNEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 60

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KH MEIIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206

[Close]
BLAST of CmaCh06G005610 vs. Swiss-Prot
Match: RS52_ARATH (40S ribosomal protein S5-2 OS=Arabidopsis thaliana GN=RPS5B PE=1 SV=2)

HSP 1 Score: 345.9 bits (886), Expect = 3.1e-94
Identity = 177/206 (85.92%), Postives = 192/206 (93.20%), Query Frame = 1 

Query: 1   MAEAVEVVQELIQP-HHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYS 60
           MA A +V  E+ Q   ++VKLFNRWT+DDV V D+SL DYIGV  +KHAT+VPHTAGRYS
Sbjct: 1   MATAADVDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 60

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KH MEIIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206

[Close]
BLAST of CmaCh06G005610 vs. Swiss-Prot
Match: RS5_HUMAN (40S ribosomal protein S5 OS=Homo sapiens GN=RPS5 PE=1 SV=4)

HSP 1 Score: 306.6 bits (784), Expect = 2.1e-82
Identity = 151/189 (79.89%), Postives = 172/189 (91.01%), Query Frame = 1 

Query: 17  DVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYSMKRFRKAQCPIVERLTN 76
           D+KLF +W+ DDVQ+ND+SL DYI V   K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 16  DIKLFGKWSTDDVQINDISLQDYIAVK-EKYAKYLPHSAGRYAAKRFRKAQCPIVERLTN 75

Query: 77  SLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVV 136
           S+MMHGRNNGKKLM VRI+KH  EIIHLLT  NP+QV+V+A++NSGPRED+TRIG AG V
Sbjct: 76  SMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTV 135

Query: 137 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 196
           RRQAVD+SPLRRVNQAI+LL TGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD
Sbjct: 136 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 195

Query: 197 EIERVAKAN 206
           E+ERVAK+N
Sbjct: 196 ELERVAKSN 203

[Close]
BLAST of CmaCh06G005610 vs. Swiss-Prot
Match: RS5_BOVIN (40S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=2 SV=3)

HSP 1 Score: 306.6 bits (784), Expect = 2.1e-82
Identity = 151/189 (79.89%), Postives = 172/189 (91.01%), Query Frame = 1 

Query: 17  DVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYSMKRFRKAQCPIVERLTN 76
           D+KLF +W+ DDVQ+ND+SL DYI V   K+A Y+PH+AGRY+ KRFRKAQCPIVERLTN
Sbjct: 16  DIKLFGKWSTDDVQINDISLQDYIAVK-EKYAKYLPHSAGRYAAKRFRKAQCPIVERLTN 75

Query: 77  SLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVVNSGPREDATRIGSAGVV 136
           S+MMHGRNNGKKLM VRI+KH  EIIHLLT  NP+QV+V+A++NSGPRED+TRIG AG V
Sbjct: 76  SMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGTV 135

Query: 137 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 196
           RRQAVD+SPLRRVNQAI+LL TGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD
Sbjct: 136 RRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 195

Query: 197 EIERVAKAN 206
           E+ERVAK+N
Sbjct: 196 ELERVAKSN 203

[Close]
BLAST of CmaCh06G005610 vs. TrEMBL
Match: A0A0A0KSZ1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G292230 PE=3 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 7.4e-103
Identity = 195/206 (94.66%), Postives = 201/206 (97.57%), Query Frame = 1 

Query: 1   MAEAVEVV-QELIQPHHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYS 60
           MA  V+VV QELIQPHHDVKLFNRWTFDDVQVND+SL DY+GVAP+KHATYVPHTAGRYS
Sbjct: 1   MAVEVDVVNQELIQPHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYS 60

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPI+ERLTNSLMMHGRNNGKKLMAVRIIKH MEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIIERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206

[Close]
BLAST of CmaCh06G005610 vs. TrEMBL
Match: A0A0A0K5K0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G232530 PE=3 SV=1)

HSP 1 Score: 375.9 bits (964), Expect = 3.1e-101
Identity = 192/206 (93.20%), Postives = 199/206 (96.60%), Query Frame = 1 

Query: 1   MAEAVEVV-QELIQPHHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYS 60
           MA  ++VV QEL Q HHDVKLFNRWTFDDVQVND+SL DY+GVAP+KHATYVPHTAGRYS
Sbjct: 1   MAVEIDVVNQELTQSHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYS 60

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKH MEIIHLLTDLNP+QVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPVQVIVDAVV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206

[Close]
BLAST of CmaCh06G005610 vs. TrEMBL
Match: A0A0A0LRZ5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373440 PE=3 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 1.5e-100
Identity = 192/206 (93.20%), Postives = 198/206 (96.12%), Query Frame = 1 

Query: 1   MAEAVEVV-QELIQPHHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYS 60
           MA  V+VV QEL  PHHDVKLFNRWTFDDVQVND+SL DY+GVAP+KHATYVPHTAGRYS
Sbjct: 78  MAVEVDVVNQELTLPHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYS 137

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKH MEIIHLLTDLN +QVIVDAVV
Sbjct: 138 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNTVQVIVDAVV 197

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 198 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 257

Query: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 258 INAAKGSSNSYAIKKKDEIERVAKAN 283

[Close]
BLAST of CmaCh06G005610 vs. TrEMBL
Match: A0A0A0LVI4_CUCSA (40S ribosomal protein S5 OS=Cucumis sativus GN=Csa_1G168900 PE=4 SV=1)

HSP 1 Score: 372.9 bits (956), Expect = 2.6e-100
Identity = 192/206 (93.20%), Postives = 197/206 (95.63%), Query Frame = 1 

Query: 1   MAEAVEVV-QELIQPHHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYS 60
           MA  V+V  QEL Q HHDVKLFNRWTFDDVQVND+SL DY+GVAP+KHATYVPHTAGRYS
Sbjct: 1   MAVEVDVASQELTQSHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYS 60

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVER TNSLMMHGRNNGKKLMAVRIIKH MEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERRTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206

[Close]
BLAST of CmaCh06G005610 vs. TrEMBL
Match: W9RQK6_9ROSA (40S ribosomal protein S5 OS=Morus notabilis GN=L484_012437 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 1.9e-98
Identity = 184/198 (92.93%), Postives = 192/198 (96.97%), Query Frame = 1 

Query: 8   VQELIQPHHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYSMKRFRKAQ 67
           VQ+  QPH DVKLFNRW+FDDVQVND+SL DYIGV P+KHATYVPHTAGRYS+KRFRKAQ
Sbjct: 6   VQDPSQPHFDVKLFNRWSFDDVQVNDISLADYIGVVPAKHATYVPHTAGRYSVKRFRKAQ 65

Query: 68  CPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVVNSGPREDA 127
           CPIVERLTNSLMMHGRNNGKKLMAVRI++H MEIIHLLTDLNPIQVIVDAVVNSGPREDA
Sbjct: 66  CPIVERLTNSLMMHGRNNGKKLMAVRIVRHAMEIIHLLTDLNPIQVIVDAVVNSGPREDA 125

Query: 128 TRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSS 187
           TRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARE+AFRNIKTIAECLADELINAAKGSS
Sbjct: 126 TRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSS 185

Query: 188 NSYAIKKKDEIERVAKAN 206
           NSYAIKKKDEIERVAKAN
Sbjct: 186 NSYAIKKKDEIERVAKAN 203

[Close]
BLAST of CmaCh06G005610 vs. TAIR10
Match: AT2G37270.1 (AT2G37270.1 ribosomal protein 5B)

HSP 1 Score: 350.5 bits (898), Expect = 7.1e-97
Identity = 179/206 (86.89%), Postives = 193/206 (93.69%), Query Frame = 1 

Query: 1   MAEAVEVVQELIQP-HHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYS 60
           MA + E+  E+ Q   ++VKLFNRW+FDDV V D+SL DYIGV PSKHAT+VPHTAGRYS
Sbjct: 1   MAASAEIDAEIQQQLTNEVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYS 60

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KH MEIIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206

[Close]
BLAST of CmaCh06G005610 vs. TAIR10
Match: AT3G11940.1 (AT3G11940.1 ribosomal protein 5A)

HSP 1 Score: 345.9 bits (886), Expect = 1.7e-95
Identity = 177/206 (85.92%), Postives = 192/206 (93.20%), Query Frame = 1 

Query: 1   MAEAVEVVQELIQP-HHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYS 60
           MA A +V  E+ Q   ++VKLFNRWT+DDV V D+SL DYIGV  +KHAT+VPHTAGRYS
Sbjct: 1   MATAADVDAEIQQALTNEVKLFNRWTYDDVTVTDISLVDYIGVQAAKHATFVPHTAGRYS 60

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRI+KH MEIIHLL+DLNPIQVI+DA+V
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAI+L+TTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIFLITTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206

[Close]
BLAST of CmaCh06G005610 vs. TAIR10
Match: ATCG01240.1 (ATCG01240.1 ribosomal protein S7)

HSP 1 Score: 53.5 bits (127), Expect = 1.8e-07
Identity = 46/135 (34.07%), Postives = 72/135 (53.33%), Query Frame = 1 

Query: 73  RLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVVNSGP--REDATRI 132
           RL N L+     +GKK +A +II   ++ I   T+ NP+ V+  A+    P     A R+
Sbjct: 21  RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80

Query: 133 GSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSY 192
           G  G   +  ++I   +    AI  L   +R+   RN   +A  L+ EL++AAKGS +  
Sbjct: 81  G--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD-- 140

Query: 193 AIKKKDEIERVAKAN 206
           AI+KK+E  R+A+AN
Sbjct: 141 AIRKKEETHRMAEAN 148

[Close]
BLAST of CmaCh06G005610 vs. TAIR10
Match: ATCG00900.1 (ATCG00900.1 Ribosomal protein S7p/S5e family protein)

HSP 1 Score: 53.5 bits (127), Expect = 1.8e-07
Identity = 46/135 (34.07%), Postives = 72/135 (53.33%), Query Frame = 1 

Query: 73  RLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVVNSGP--REDATRI 132
           RL N L+     +GKK +A +II   ++ I   T+ NP+ V+  A+    P     A R+
Sbjct: 21  RLVNMLVNRILKHGKKSLAYQIIYRALKKIQQKTETNPLSVLRQAIRGVTPDIAVKARRV 80

Query: 133 GSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSY 192
           G  G   +  ++I   +    AI  L   +R+   RN   +A  L+ EL++AAKGS +  
Sbjct: 81  G--GSTHQVPIEIGSTQGKALAIRWLLGASRKRPGRN---MAFKLSSELVDAAKGSGD-- 140

Query: 193 AIKKKDEIERVAKAN 206
           AI+KK+E  R+A+AN
Sbjct: 141 AIRKKEETHRMAEAN 148

[Close]
BLAST of CmaCh06G005610 vs. NCBI nr
Match: gi|449445316|ref|XP_004140419.1| (PREDICTED: 40S ribosomal protein S5 [Cucumis sativus])

HSP 1 Score: 381.3 bits (978), Expect = 1.1e-102
Identity = 195/206 (94.66%), Postives = 201/206 (97.57%), Query Frame = 1 

Query: 1   MAEAVEVV-QELIQPHHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYS 60
           MA  V+VV QELIQPHHDVKLFNRWTFDDVQVND+SL DY+GVAP+KHATYVPHTAGRYS
Sbjct: 1   MAVEVDVVNQELIQPHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYS 60

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPI+ERLTNSLMMHGRNNGKKLMAVRIIKH MEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIIERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206

[Close]
BLAST of CmaCh06G005610 vs. NCBI nr
Match: gi|659114009|ref|XP_008456864.1| (PREDICTED: 40S ribosomal protein S5-like [Cucumis melo])

HSP 1 Score: 380.2 bits (975), Expect = 2.4e-102
Identity = 196/206 (95.15%), Postives = 200/206 (97.09%), Query Frame = 1 

Query: 1   MAEAVEVV-QELIQPHHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYS 60
           MA  V+VV QEL QPHHDVKLFNRWTFDDVQVND+SL DYIGVAP+KHATYVPHTAGRYS
Sbjct: 47  MAVEVDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 106

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKH MEIIHLLTDLNPIQVIVDAVV
Sbjct: 107 VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 166

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 167 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 226

Query: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 227 INAAKGSSNSYAIKKKDEIERVAKAN 252

[Close]
BLAST of CmaCh06G005610 vs. NCBI nr
Match: gi|659092671|ref|XP_008447165.1| (PREDICTED: 40S ribosomal protein S5-like isoform X2 [Cucumis melo])

HSP 1 Score: 379.8 bits (974), Expect = 3.1e-102
Identity = 195/206 (94.66%), Postives = 200/206 (97.09%), Query Frame = 1 

Query: 1   MAEAVEVV-QELIQPHHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYS 60
           MA  ++VV QEL QPHHDVKLFNRWTFDDVQVND+SL DYIGVAP+KHATYVPHTAGRYS
Sbjct: 1   MAVEIDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 60

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKH MEIIHLLTDLNPIQVIVDAVV
Sbjct: 61  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 120

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180

Query: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206

[Close]
BLAST of CmaCh06G005610 vs. NCBI nr
Match: gi|659092669|ref|XP_008447164.1| (PREDICTED: 40S ribosomal protein S5-like isoform X1 [Cucumis melo])

HSP 1 Score: 379.8 bits (974), Expect = 3.1e-102
Identity = 195/206 (94.66%), Postives = 200/206 (97.09%), Query Frame = 1 

Query: 1   MAEAVEVV-QELIQPHHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYS 60
           MA  ++VV QEL QPHHDVKLFNRWTFDDVQVND+SL DYIGVAP+KHATYVPHTAGRYS
Sbjct: 14  MAVEIDVVNQELTQPHHDVKLFNRWTFDDVQVNDISLVDYIGVAPAKHATYVPHTAGRYS 73

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKH MEIIHLLTDLNPIQVIVDAVV
Sbjct: 74  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPIQVIVDAVV 133

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 134 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 193

Query: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 194 INAAKGSSNSYAIKKKDEIERVAKAN 219

[Close]
BLAST of CmaCh06G005610 vs. NCBI nr
Match: gi|778725851|ref|XP_011659014.1| (PREDICTED: 40S ribosomal protein S5 isoform X1 [Cucumis sativus])

HSP 1 Score: 375.9 bits (964), Expect = 4.5e-101
Identity = 192/206 (93.20%), Postives = 199/206 (96.60%), Query Frame = 1 

Query: 1   MAEAVEVV-QELIQPHHDVKLFNRWTFDDVQVNDMSLGDYIGVAPSKHATYVPHTAGRYS 60
           MA  ++VV QEL Q HHDVKLFNRWTFDDVQVND+SL DY+GVAP+KHATYVPHTAGRYS
Sbjct: 14  MAVEIDVVNQELTQSHHDVKLFNRWTFDDVQVNDISLVDYVGVAPAKHATYVPHTAGRYS 73

Query: 61  MKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHTMEIIHLLTDLNPIQVIVDAVV 120
           +KRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKH MEIIHLLTDLNP+QVIVDAVV
Sbjct: 74  VKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDLNPVQVIVDAVV 133

Query: 121 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 180
           NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL
Sbjct: 134 NSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADEL 193

Query: 181 INAAKGSSNSYAIKKKDEIERVAKAN 206
           INAAKGSSNSYAIKKKDEIERVAKAN
Sbjct: 194 INAAKGSSNSYAIKKKDEIERVAKAN 219

The following BLAST results are available for this feature:
BLAST of CmaCh06G005610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RS5_CICAR9.7e-9694.1840S ribosomal protein S5 (Fragment) OS=Cicer arietinum GN=RPS5 PE=2 SV=1[more]
RS51_ARATH1.3e-9586.8940S ribosomal protein S5-1 OS=Arabidopsis thaliana GN=RPS5A PE=1 SV=1[more]
RS52_ARATH3.1e-9485.9240S ribosomal protein S5-2 OS=Arabidopsis thaliana GN=RPS5B PE=1 SV=2[more]
RS5_HUMAN2.1e-8279.8940S ribosomal protein S5 OS=Homo sapiens GN=RPS5 PE=1 SV=4[more]
RS5_BOVIN2.1e-8279.8940S ribosomal protein S5 OS=Bos taurus GN=RPS5 PE=2 SV=3[more]
BLAST of CmaCh06G005610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSZ1_CUCSA7.4e-10394.66Uncharacterized protein OS=Cucumis sativus GN=Csa_5G292230 PE=3 SV=1[more]
A0A0A0K5K0_CUCSA3.1e-10193.20Uncharacterized protein OS=Cucumis sativus GN=Csa_7G232530 PE=3 SV=1[more]
A0A0A0LRZ5_CUCSA1.5e-10093.20Uncharacterized protein OS=Cucumis sativus GN=Csa_2G373440 PE=3 SV=1[more]
A0A0A0LVI4_CUCSA2.6e-10093.2040S ribosomal protein S5 OS=Cucumis sativus GN=Csa_1G168900 PE=4 SV=1[more]
W9RQK6_9ROSA1.9e-9892.9340S ribosomal protein S5 OS=Morus notabilis GN=L484_012437 PE=3 SV=1[more]
BLAST of CmaCh06G005610 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G37270.17.1e-9786.89 ribosomal protein 5B[more]
AT3G11940.11.7e-9585.92 ribosomal protein 5A[more]
ATCG01240.11.8e-0734.07ATCG01240.1 ribosomal protein S7[more]
ATCG00900.11.8e-0734.07ATCG00900.1 Ribosomal protein S7p/S5e family protein[more]
BLAST of CmaCh06G005610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449445316|ref|XP_004140419.1|1.1e-10294.66PREDICTED: 40S ribosomal protein S5 [Cucumis sativus][more]
gi|659114009|ref|XP_008456864.1|2.4e-10295.15PREDICTED: 40S ribosomal protein S5-like [Cucumis melo][more]
gi|659092671|ref|XP_008447165.1|3.1e-10294.66PREDICTED: 40S ribosomal protein S5-like isoform X2 [Cucumis melo][more]
gi|659092669|ref|XP_008447164.1|3.1e-10294.66PREDICTED: 40S ribosomal protein S5-like isoform X1 [Cucumis melo][more]
gi|778725851|ref|XP_011659014.1|4.5e-10193.20PREDICTED: 40S ribosomal protein S5 isoform X1 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000235Ribosomal_S5/S7
IPR005716Ribosomal_S5/S7_euk/arc
IPR020606Ribosomal_S7_CS
IPR023798Ribosomal_S7_dom
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
GO:0003723RNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0015935 small ribosomal subunit
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh06G005610.1CmaCh06G005610.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000235Ribosomal protein S5/S7PIRPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 1..210
score: 1.5
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 2..205
score: 6.0E
IPR005716Ribosomal protein S5/S7, eukaryotic/archaealTIGRFAMsTIGR01028TIGR01028coord: 18..205
score: 1.2
IPR020606Ribosomal protein S7, conserved sitePROSITEPS00052RIBOSOMAL_S7coord: 72..98
scor
IPR023798Ribosomal protein S7 domainGENE3DG3DSA:1.10.455.10coord: 18..205
score: 6.6
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 63..205
score: 2.8
IPR023798Ribosomal protein S7 domainunknownSSF47973Ribosomal protein S7coord: 19..205
score: 3.14
NoneNo IPR availablePANTHERPTHR11205:SF2440S RIBOSOMAL PROTEIN S5-1-RELATEDcoord: 2..205
score: 6.0E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmaCh06G005610CmoCh14G003920Cucurbita moschata (Rifu)cmacmoB792
CmaCh06G005610Cp4.1LG03g00260Cucurbita pepo (Zucchini)cmacpeB830
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CmaCh06G005610Melon (DHL92) v3.6.1cmamedB855
CmaCh06G005610Silver-seed gourdcarcmaB0350
CmaCh06G005610Silver-seed gourdcarcmaB0957
CmaCh06G005610Cucumber (Chinese Long) v3cmacucB0966
CmaCh06G005610Watermelon (97103) v2cmawmbB844
CmaCh06G005610Wax gourdcmawgoB0978
CmaCh06G005610Cucurbita maxima (Rimu)cmacmaB278
CmaCh06G005610Cucumber (Gy14) v1cgycmaB0681
CmaCh06G005610Cucurbita moschata (Rifu)cmacmoB829
CmaCh06G005610Wild cucumber (PI 183967)cmacpiB828
CmaCh06G005610Cucumber (Chinese Long) v2cmacuB816
CmaCh06G005610Melon (DHL92) v3.5.1cmameB755
CmaCh06G005610Watermelon (Charleston Gray)cmawcgB726
CmaCh06G005610Watermelon (97103) v1cmawmB788
CmaCh06G005610Cucurbita pepo (Zucchini)cmacpeB852
CmaCh06G005610Bottle gourd (USVL1VR-Ls)cmalsiB754
CmaCh06G005610Cucumber (Gy14) v2cgybcmaB428