Cp4.1LG02g17630 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG02g17630
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Zinc finger family protein
Location	Cp4.1LG02 : 14365585 .. 14372702 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGATTCAGATCAAATTTGATTTTAAGTGGAGCTCCTTTTGAGTGAGATTGGGCTTGGGCGAACTTTGGGCCACGGGCCCTTAACGAACGAGGCTGACTGCAGACTTCTGATCCTCCATAGATCGTCTCGGATCCTACGGAATGCAACTGGTAGCATAATTATTTGATTTACAAAATACAATTGGATGAATCCGGCTAAAATTGTTGTCATAATTACTTGATTTCTGTGAGTTTCGTAATTTTTCAACTTCTTCACCAAGAACAAAGATTAAAAGAAAAGGGGGAATTAACGAACAATTGATCAAATAAATATGCTGAATCGAGAACAAAGAGAGAGAAAGCGAGAGGTGGGATGTGTCCTCCGAGCTGAATAGTTAAACCTGGATTGTTCTTTCCTCTTGCTTCACCTTTATACTCCGTTTGGTAGTTTTTGCCGGGCCAGACAACCTACATACCTAAAACTCATACTCACGCTCTGTTAAGAGAGAGAGAGAGAGAGAGAGAGATCATCCTCTGCTATGGAAATGGGATCTCAGTCTTGCCTTCCCAGCTGAATCACTAGCGCCATTTCTTCCATCGATACCTTTGATTCAGTCACTGACTTTTCTGTCTCATTCTCCTTCGCTTTACAGGTACTTTCTACTCTTAATCAATCATTCACCCCTTATCCGCATTTCTATTTCTGATCGTCTTTTTAGATCTTTTCCATTTTCCCCGTTTTCGTACCACTGGGTGATGATTTTATGATCTGGGTTTTCGAATTTGATCCTTTTCAGATGACTTTTGACTGTAGATGGGATTAATCAGAAATGGGTTACTTCTGTATTCTTTGTTTAATTGCCCTCCGCTCTGGAATTGATCACTATCACTCTCCTTTACAGAGGGATACCATGGTTTTACTTTGTTTCTTTGATTTCAACTGTGGACTCCATCAGTATGAAGAATGTGGTCGACCTTTATTTCATTATTTTTTCTGAATTTTTTTCTTTGAGCTATGATTCTATCATCTCCTTACACTCCTAGATTTGAAGTCGTTTGAGGGTTTTCATCATGGAGGATGTTCGATAAGGAGAAGATGTAGTCTTAGAAGTCTGCGTTCAGTGTGGATAACCTTGTGACAGATGAAATTCTGCCTATCTCGATCTAGGAGAATGTATTTGAAGCTGAGTTTTCTTTGAGTTTTCTTTTCTTCTCGGACATGTTCATGTAGTTAAAGCTGCCCGAGGAACTATACTAACCTGGATGCTAGATAGCAGTTAAGCGTCCATTTCGAAGCTCAGTGTATGCTTAAGGTTGCAGAGAAGGGAACTGTAAGCTAGAAACGTAAAGCCATGCTTTTTCCATAGGGTGGGTAGTGGGAGAAGCAGTAAGAATTTCATTGACCCCTTGGAGGAGGAGATGAGAATGTTGGTTAAGGAGGAGAATGAGACTGAGCCCTTGGAGGATAATGGGTTCTCATGGCCTTCTTTCAGGACAATTGGGTGGGCATAAAAGAGGACTTGATGCGGGTGCTGATGTTCTTTGAATGAGGCATTTTGGATAACTCTCTGAATCAGACTTTTGTTTGCTTTGTTCCTAAAAGAAGAGAGGCCAAACAAGGTTAAGGACTTTAGACCCATCAACTTGGTTGTGAGATTGGCACTTCCCCTTCTCTTATTTAGGTTTCCCCATTGACCGTAAACCGAATTCTATCACTTTTTGGAATCATGTTGTGGAGAAGGTGCGAAAGAGATTTGCTTTCCTCTTTTGTTTTCTTTTTTTCCTTTTCTTTTACAAGTGTAGATTTACTTTTATCTATTTAGTTTTTACCCGTCTACTTCTTTTCCCTTTTTAGAGCCCCCAATTCTGTTTCTAAGTCTTTAGAGAAGCTTACGAGGTATTTACCATCGGAAGGGGTCGATGAGGGTAGGAGTGTAAATTGGGTAAATTGGGACTTAGGTGGGGAAGCCAGAGAATCTTGAGGGACTCAAGTTAGAAAATTTAAGGATCCCAACTTTTAATTGTAACGACCCACTTGCCAAAGTTCAAATCATGGATCACCACATGGACTCAAAAGGTCAAAAGGCGACAATTGTAAAGCAGGAGACCGAAAGGAAATTTGAAATTTAACATGCTTTTATAACTGATGTAAAAATAATTTAAAAGTACGCATCAAAATAGCTCACTAAGATAGCAAGTTTTTGAAGAGAATAACATTAAAATAATATTAAAAGTAACATGGATGGAAGAGACTCAATCTATGGCCCCTCCTGCAGTCACACGTCTCCGTATGCTCCCACTATCAACTTACGCTCCATCTAAAAACATAGAATAATATGGGACGAGTATAAAATACTCATTAGGCAACCAACTTGTAGGCTCTTGTTGGACTCATTCCTATACATGAAAACATAGGCTATGTGTTCATAATTATCCCTAGAAGTATCCAAACTACAACATATAGTACTAAACCCCTCAGCATNTATTTTCAACCCCCTCGGGGTTCATAACCGGTGGGTTTTTCTCTCTCTCTTAGCTCTATGTTTAACGTATATCTGGTTCCGTCGTCAATCTTGCGCAAATTGCACCTCGAGTCACTATGACTCATGGAAGGGCCATAAGATAATACTCTTTAAGTCTAGAAGAGCCCTTTTGTTCTTTCTCCTTTCAAACACGCTTCTGTCGCCGTACAGTGTTGTCCGTGGTGATAGTGTACGGTGGCGGCTGAAACCGTCCTCTCTTTATTTATTTTTTTTAATTTTCTAGCTGTCATCACTTTCCCTCTTCTTTATTTCAAATACATTGATCATCACATTAACGATTCCCGGTTGAGCCTAAAACCCCCTCATCTGTTCGAGTGGGTGCTTGGTGGGGATAAAGGCACTTACAAAAATCCTTGGAAGGCGTCTACTTTGAGCCCCCTTCCTTTTCTATTCTGGTCTAGTTCTCCATGGAAGAGATATGAACCGTTCCTAATTTGAGGATGGAAATTTGGAGTATTTTCTGCATTGATGGATAAGATTGGCTAATTGGCAAGCTTGGTAGTTCGTTACATCAGCTCCAAAAGAATAAGTTACATTGGAATTCAGAAAATTCTATGAGTTCTTAGTTGCATTAAAGAAGAAGATATAGAGGTTGTGGCCACTGGCAAGGCATTTCTACACCCGCCCTTATCTGCCAGAAAAATTGATGAACCGGCAAGGCTTCAACATAAGGGAGCAGGAATTACTAACTAAGAGCAACCTTTGTGCTTAGGAAGGACTAGCTAAGCTATACCTATTTCTCACGGGTAGTTTAGGTGCCAGGACCTTGCTTCTATCCCTAACCAATTACAATAAATAGTTGTGGTTGTGGCACCCTAAGTAACCTCAACCTCAAGCACTAGTATAATGAAGTATTAACATTCACACTATAGGTTTTGCAGTGATAACTTTTATCCGAGGCCAAGTACATTCCTTCCTTATTACTAAAATAAAGAATTAAGGTTACATATAAGGTAACCTCCACCTAGATTTGGTATATAAAGAAATTGTCATTGCCAGTTACGAAAGACAATGATATTATCCCATGGTTAACTGTATATATTTGATCTTCTATGTGTATAATTTCGTGCAAACTTGATTACTCTGATTTCCACAATTATGCAGGTTCGTTAATTTTCATGTAAATGATCAATCTGAGCAGTAGCTCAAGCGATGACTTTACAAGTCTGATTCAAGAGGTAGGCTCCTCACAATGCAACTGGCACCAAATAATGATGAAAATGCACCCATTTTAAGTCAATTGGATTTTCAGCCACAATCTGTGGAATCGTCATCCCCGGCTGAGATTATTGTCATAGGGAGAGAGAGCTCCGTTACGGATGATGATTTACACAATCCTAACGTTGATGAAACTTGTCACCTGGTGAACGCAGACCTACCGCAATGTCGGATATGCCTCGACACCGGAGGTTTTTAACATTCTTTTTTTGTTCAATATGCAATGCAATTTCATCAAACATCAGTTAAGACAGTGTTTCTTTCAGGAGAAGATTTAATCGCTCCATGCCACTGCAAAGGCACTCAGAAGTATGTCCATAGATTATGTCTTGATAATTGGAGGTCCACAAAGGTCAGTTTTCCTGAATTTCATATTACCTCTCTATTCTTAATTCTTAATTGTAGCAGATATTGTCGATTATGCCCCGTGATATGTCATCTTAATTGTAGCAGATATTGTCGATTATGCCCCGTGATATGTCATCGTCAGTCTCACGATTTTAAAATGCGCCTACTAGGGAGTTCTACTCTCTTATTAGGAATGCTTCGTTTCCCTTTTCAACCAATGTGGGATCTCCCGATCCACCACCCTCTTGGGAACCCAGCGTCCTTATGGCACACTGCCTGGTAACTGACCCTAATACCATTTGTAACAACTCAAGTCCACTGCTATCAAATATTGTCTGTTTTGGCCCATTACGTATCGTCGTCAGCCTCACGGTTTTAAAATGCGCCTACTAGGGAGAGGTTTCCACATCCTTATAAGGAATGTTTCGTTTCCCTCTTCAACCAATGTGAGATCTCATAGTTGGTTAGAACCCGCATCGGTTGAAGAGAGAAACGAAACATTTCTTATAAGGGTGTGAAAACAACTCCGTTTTAAAATCGTGAGGCTGACGGCGATACATAACCGGCCAAAGCAAACAATATCTACTAATAGTGGGCTTGAGCGGTTACAAATAGTATTGGAATGGCTCAAAAGATGTGTCAACAAAGACGTTGGACCTCCAAGAAGAGTGGATTGTGAGATTTAACATTAGTTGAAAAGGAGAACGAGTCAGTGAAAACCTCCTCTAATAGGAGTGTTTTTAAAACTGTGAGGCTGATAGCAATACATAACATATCAAAGCTGACAATATCTGCCAATATCTACTGGCAGTAGGTGTAGATTTAGGTTTAGGTTGTTATATATTTGAACTACTACCAATCTAATACATCTGCTTTCATAGACGTTCCAAACAAGTGGGTGTTCGATAATGAAGTTTTCAAGGTTTTTGGCTTCTAATCCATGTCAGTAATTCTGTCAGGAGGGCTTTGCTTTTGCTCATTGTACAGAGTGCAGAGCTATGTTCATGATACGTGCAAATGTCCCTACTGATCGCTGGTGGTTAAGACTGAAGTTTCAGTTTCTCGTTGCTAGAGACCATGCGTTCATTTTCATCATTGTTCAGCTGGTAGATTCTTGTAATTATATTTTCAACTACTCTGGGTTCATTCACTTTTAAGTCAAGGAGTTTGATTCGAGTTTGGCTAAATTTTCTTCCTTATTATTATCATATAAACCCATTTCATTGTTATGATTGATTTTTCTAGAGAGATCTTCACCATGTGCTTTAAACAGATCGTGGCATTCTTGGGTGTGTTGGTGTACAAATTCTACGGGGAGGAACTAAGGGAAATGTTTGGTTACGAAGAACACCCATATGGGTTCTACGCCATGGCTGGTATACTGAGGCTGCCGATTAACTACTTACTTTTTAGTCTTTCTTATATACGTATTGTATTTATTAAAGTGAATATTCTCCCACAGATTTTTGGTTTCTTTTGATAAGAAGAACCTAGAACTTGCTGTTGGATGAATCCTTGAATGAAATCAAGCACACCGGCTTAAGAAAATGTAGTTGCTATACTATCCGACTTTTAAATGCTTCGTTCTATAATTTCCTTCTGCAGTCTTGGCTATCATCTTGGTTGGATTACTCTACGGATTCTTCATAGCGATTATATGCGGGCAGAGGATAAATGAACGCCACTACCATGTCCTTGCTAAGCAAGAACTGACAAAGGTTCAGTAACGATTTAAGATCAGAATATTGTAAAATTGTCCTCCCCCCGTTAAGAGTTTTATGTCAAAGTTGCGCTTACAGCGGTTAGCATGTATTCCACCTGAGATTGATGGTTCAAATGTCCCATCTCCTATTCTTTGTACTAAAAGAAAAACTTTATACATTTCAGGAGTATATAGTCGAAGATCGAGAACATAACAAAAGTGTTCCTGAACTAGACCCCAGACATGTTATGGAGCTAAGGATGTTAGGCCTGTATTAATCTGGAACTTCATGAACTCAACTTGATGTAAGGAACTCTGTAGTGTATAAATTCCTCATCTTTTTATATCTCACTGGAGAATTAGCATTTGGGTAATGTTGTCTGGCCATAATATTTGTTTTGTAACTTCAGAATTCAATTTACAATTATATTGCAAGAATCCTGGAGGTTTTACATTTTTTTGACCCCGTAATCTTCACAGGTTTTGATTGATCTGGCGGGTATACCTTTGAGTTGATCAAACAAAGCAAATTGTTTATAAAATTTCGCGAGATACCTAGCAAGAAGAGTCTGTGCCTTCCTCGTTTACTATAGCGGTCTGTTTGAACAAATAAGGAGTCGCTTCTTGGTTGGGCACACAGATTTCCTGGTGTAAATGGGCATTCTACGTGATGACGAGGAAATTGCTTCCCGTCCCGCCAGGCTCCCACTTACCCCTGAAGGCCATTTCACATATCCTTTTGGATTTGTATTTCTTTGTGAACGATTCAAATTAGTAAATTAAACTGTAATTTATCTGTTAGCTATTGAGTTATCCAAGATGCTTCAAGGTTAAGACAGCTATGCGTCCATACTCCTATTAATGTGTGTGATCCTTACCTCTTGGGTTCTTTTAGGCAGTCAAAGATATTGCTTAGTTCTAGTCTTTCAGCATTCGTATATGAAGATGTTTCACAAGGAAGGAAAGAGGTCGGTTTGGCTTTTTGCGGAGAAAGAGGGAGAATTGGAGATTAGAAGCTAATCCTTCAATTTCATAGAAGAAGAAACAAACAACGTATCATAATATATGTATAACGAAGTATGAATGAATCCTTAAGTTGGGAGTAAAAGGAAATAAGGTAATTTGAGCACAAAAAAGAAAGAGAGAAAAAAACAAAGAAGAGAAGAAATCACCGAGATTCTAGAGTTCCGAATCTGGTTGTGGTCGGAGCGTTTGAGCGGCAGCCTTGGCAGAATCCTCCACCATTTGTTTGGTTGTGTGGAAGCTCTTGGTAATGGATTCCTTCATATTCTCATTCCCCTTCACTTGTCCATCTTCCACCGGTTTT

mRNA sequence

AATGATTCAGATCAAATTTGATTTTAAGTGGAGCTCCTTTTGAGTGAGATTGGGCTTGGGCGAACTTTGGGCCACGGGCCCTTAACGAACGAGGCTGACTGCAGACTTCTGATCCTCCATAGATCGTCTCGGATCCTACGGAATGCAACTGGTAGCATAATTATTTGATTTACAAAATACAATTGGATGAATCCGGCTAAAATTGTTGTCATAATTACTTGATTTCTGTGAGTTTCGTAATTTTTCAACTTCTTCACCAAGAACAAAGATTAAAAGAAAAGGGGGAATTAACGAACAATTGATCAAATAAATATGCTGAATCGAGAACAAAGAGAGAGAAAGCGAGAGGTGGGATGTGTCCTCCGAGCTGAATAGTTAAACCTGGATTGTTCTTTCCTCTTGCTTCACCTTTATACTCCGTTTGGTAGTTTTTGCCGGGCCAGACAACCTACATACCTAAAACTCATACTCACGCTCTGTTAAGAGAGAGAGAGAGAGAGAGAGAGATCATCCTCTGCTATGGAAATGGGATCTCAGTCTTGCCTTCCCAGCTGAATCACTAGCGCCATTTCTTCCATCGATACCTTTGATTCAGTCACTGACTTTTCTGTCTCATTCTCCTTCGCTTTACAGGTTCGTTAATTTTCATGTAAATGATCAATCTGAGCAGTAGCTCAAGCGATGACTTTACAAGTCTGATTCAAGAGGTAGGCTCCTCACAATGCAACTGGCACCAAATAATGATGAAAATGCACCCATTTTAAGTCAATTGGATTTTCAGCCACAATCTGTGGAATCGTCATCCCCGGCTGAGATTATTGTCATAGGGAGAGAGAGCTCCGTTACGGATGATGATTTACACAATCCTAACGTTGATGAAACTTGTCACCTGGTGAACGCAGACCTACCGCAATGTCGGATATGCCTCGACACCGGAGGAGAAGATTTAATCGCTCCATGCCACTGCAAAGGCACTCAGAAGTATGTCCATAGATTATGTCTTGATAATTGGAGGTCCACAAAGGAGGGCTTTGCTTTTGCTCATTGTACAGAGTGCAGAGCTATGTTCATGATACGTGCAAATGTCCCTACTGATCGCTGGTGGTTAAGACTGAAGTTTCAGTTTCTCGTTGCTAGAGACCATGCGTTCATTTTCATCATTGTTCAGCTGATCGTGGCATTCTTGGGTGTGTTGGTGTACAAATTCTACGGGGAGGAACTAAGGGAAATGTTTGGTTACGAAGAACACCCATATGGGTTCTACGCCATGGCTGTCTTGGCTATCATCTTGGTTGGATTACTCTACGGATTCTTCATAGCGATTATATGCGGGCAGAGGATAAATGAACGCCACTACCATGTCCTTGCTAAGCAAGAACTGACAAAGGAGTATATAGTCGAAGATCGAGAACATAACAAAAGTGTTCCTGAACTAGACCCCAGACATGTTATGGAGCTAAGGATGTTAGGCCTGTATTAATCTGGAACTTCATGAACTCAACTTGATGTTTTGATTGATCTGGCGGGTATACCTTTGAGTTGATCAAACAAAGCAAATTGTTTATAAAATTTCGCGAGATACCTAGCAAGAAGAGTCTGTGCCTTCCTCGTTTACTATAGCGGTCTGTTTGAACAAATAAGGAGTCGCTTCTTGGTTGGGCACACAGATTTCCTGGTGTAAATGGGCATTCTACGTGATGACGAGGAAATTGCTTCCCGTCCCGCCAGGCTCCCACTTACCCCTGAAGGCCATTTCACATATCCTTTTGGATTTGTATTTCTTTGTGAACGATTCAAATTAGTAAATTAAACTGTAATTTATCTGTTAGCTATTGAGTTATCCAAGATGCTTCAAGGTTAAGACAGCTATGCGTCCATACTCCTATTAATGTGTGTGATCCTTACCTCTTGGGTTCTTTTAGGCAGTCAAAGATATTGCTTAGTTCTAGTCTTTCAGCATTCGTATATGAAGATGTTTCACAAGGAAGGAAAGAGGTCGGTTTGGCTTTTTGCGGAGAAAGAGGGAGAATTGGAGATTAGAAGCTAATCCTTCAATTTCATAGAAGAAGAAACAAACAACGTATCATAATATATGTATAACGAAGTATGAATGAATCCTTAAGTTGGGAGTAAAAGGAAATAAGGTAATTTGAGCACAAAAAAGAAAGAGAGAAAAAAACAAAGAAGAGAAGAAATCACCGAGATTCTAGAGTTCCGAATCTGGTTGTGGTCGGAGCGTTTGAGCGGCAGCCTTGGCAGAATCCTCCACCATTTGTTTGGTTGTGTGGAAGCTCTTGGTAATGGATTCCTTCATATTCTCATTCCCCTTCACTTGTCCATCTTCCACCGGTTTT

Coding sequence (CDS)

ATGCAACTGGCACCAAATAATGATGAAAATGCACCCATTTTAAGTCAATTGGATTTTCAGCCACAATCTGTGGAATCGTCATCCCCGGCTGAGATTATTGTCATAGGGAGAGAGAGCTCCGTTACGGATGATGATTTACACAATCCTAACGTTGATGAAACTTGTCACCTGGTGAACGCAGACCTACCGCAATGTCGGATATGCCTCGACACCGGAGGAGAAGATTTAATCGCTCCATGCCACTGCAAAGGCACTCAGAAGTATGTCCATAGATTATGTCTTGATAATTGGAGGTCCACAAAGGAGGGCTTTGCTTTTGCTCATTGTACAGAGTGCAGAGCTATGTTCATGATACGTGCAAATGTCCCTACTGATCGCTGGTGGTTAAGACTGAAGTTTCAGTTTCTCGTTGCTAGAGACCATGCGTTCATTTTCATCATTGTTCAGCTGATCGTGGCATTCTTGGGTGTGTTGGTGTACAAATTCTACGGGGAGGAACTAAGGGAAATGTTTGGTTACGAAGAACACCCATATGGGTTCTACGCCATGGCTGTCTTGGCTATCATCTTGGTTGGATTACTCTACGGATTCTTCATAGCGATTATATGCGGGCAGAGGATAAATGAACGCCACTACCATGTCCTTGCTAAGCAAGAACTGACAAAGGAGTATATAGTCGAAGATCGAGAACATAACAAAAGTGTTCCTGAACTAGACCCCAGACATGTTATGGAGCTAAGGATGTTAGGCCTGTATTAA

Protein sequence

MQLAPNNDENAPILSQLDFQPQSVESSSPAEIIVIGRESSVTDDDLHNPNVDETCHLVNADLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY

Homology

[Close]

BLAST of Cp4.1LG02g17630 vs. Swiss-Prot
Match: MARH3_RAT (E3 ubiquitin-protein ligase MARCH3 OS=Rattus norvegicus GN=March3 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.7e-07
Identity = 26/71 (36.62%), Postives = 37/71 (52.11%), Query Frame = 1


Query: 61  DLPQCRICLD-TGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIR 120
           D P CRIC + +  EDL++PC C GT   +HR CL++W S+      ++C  C   F + 
Sbjct: 67  DRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSN---TSYCELCHFRFAVE 126

Query: 121 ANVPTDRWWLR 131
                   WLR
Sbjct: 127 RKPRPLVEWLR 134

[Close]

BLAST of Cp4.1LG02g17630 vs. Swiss-Prot
Match: MARH3_MOUSE (E3 ubiquitin-protein ligase MARCH3 OS=Mus musculus GN=March3 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.7e-07
Identity = 26/71 (36.62%), Postives = 37/71 (52.11%), Query Frame = 1


Query: 61  DLPQCRICLD-TGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIR 120
           D P CRIC + +  EDL++PC C GT   +HR CL++W S+      ++C  C   F + 
Sbjct: 67  DRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSN---TSYCELCHFRFAVE 126

Query: 121 ANVPTDRWWLR 131
                   WLR
Sbjct: 127 RKPRPLVEWLR 134

[Close]

BLAST of Cp4.1LG02g17630 vs. Swiss-Prot
Match: MARH3_BOVIN (E3 ubiquitin-protein ligase MARCH3 OS=Bos taurus GN=MARCH3 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.7e-07
Identity = 26/71 (36.62%), Postives = 37/71 (52.11%), Query Frame = 1


Query: 61  DLPQCRICLD-TGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIR 120
           D P CRIC + +  EDL++PC C GT   +HR CL++W S+      ++C  C   F + 
Sbjct: 67  DRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSN---TSYCELCHFRFAVE 126

Query: 121 ANVPTDRWWLR 131
                   WLR
Sbjct: 127 RKPRPLVEWLR 134

[Close]

BLAST of Cp4.1LG02g17630 vs. Swiss-Prot
Match: MARH3_HUMAN (E3 ubiquitin-protein ligase MARCH3 OS=Homo sapiens GN=MARCH3 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 7.7e-07
Identity = 26/71 (36.62%), Postives = 37/71 (52.11%), Query Frame = 1


Query: 61  DLPQCRICLD-TGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIR 120
           D P CRIC + +  EDL++PC C GT   +HR CL++W S+      ++C  C   F + 
Sbjct: 67  DRPMCRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSN---TSYCELCHFRFAVE 126

Query: 121 ANVPTDRWWLR 131
                   WLR
Sbjct: 127 RKPRPLVEWLR 134

[Close]

BLAST of Cp4.1LG02g17630 vs. Swiss-Prot
Match: MARH3_XENTR (E3 ubiquitin-protein ligase MARCH3 OS=Xenopus tropicalis GN=march3 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.3e-06
Identity = 26/71 (36.62%), Postives = 37/71 (52.11%), Query Frame = 1


Query: 61  DLPQCRICLD-TGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIR 120
           D P CRIC + +  EDL++PC C GT   +HR CL++W S+      ++C  C   F + 
Sbjct: 65  DRPMCRICHEGSTQEDLLSPCECTGTLGTIHRSCLEHWLSSSN---TSYCELCHFRFSVE 124

Query: 121 ANVPTDRWWLR 131
                   WLR
Sbjct: 125 RKPRPLVEWLR 132

[Close]

BLAST of Cp4.1LG02g17630 vs. TrEMBL
Match: A0A0A0LE97_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G640630 PE=4 SV=1)

HSP 1 Score: 469.9 bits (1208), Expect = 1.9e-129
Identity = 235/262 (89.69%), Postives = 242/262 (92.37%), Query Frame = 1


Query: 1   MQLAPNNDEN-------APILSQLDFQPQSVESSSPAEI---IVIGRESSVTDDDLHNPN 60
           MQL PN+DEN       APILSQLDF PQSV SSS AEI   I IGRESSV+DDDLHNPN
Sbjct: 1   MQLVPNHDENKDDILERAPILSQLDFLPQSVGSSSSAEIAEIIAIGRESSVSDDDLHNPN 60

Query: 61  VDETCHLVNADLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCT 120
           +DETCHLVN D PQCRICLDTGGEDLIAPCHCKGTQKYVHR CLDNWRSTKEGFAFAHCT
Sbjct: 61  IDETCHLVN-DQPQCRICLDTGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCT 120

Query: 121 ECRAMFMIRANVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREM 180
           ECRAMF++RANVP DRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREM
Sbjct: 121 ECRAMFVLRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREM 180

Query: 181 FGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDRE 240
           FGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDRE
Sbjct: 181 FGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDRE 240

Query: 241 HNKSVPELDPRHVMELRMLGLY 253
           HNK+VPELDP HVMELR+LGLY
Sbjct: 241 HNKNVPELDPSHVMELRLLGLY 261

[Close]

BLAST of Cp4.1LG02g17630 vs. TrEMBL
Match: A0A061G9T2_THECC (RING/FYVE/PHD zinc finger superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_027833 PE=4 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 9.2e-116
Identity = 208/258 (80.62%), Postives = 223/258 (86.43%), Query Frame = 1


Query: 1   MQLAPNND------ENAPILSQLDFQPQSVESSSPAEIIVIGRESSVTDDDLHNPNVDET 60
           MQL  N+       E+ PIL Q D   +S E SS  EI  IG +S V DDDL + NVDET
Sbjct: 1   MQLVSNDSQKEDILESEPILCQSDISQRSEECSSSCEITAIGGDSVVVDDDLEDINVDET 60

Query: 61  CHLVNADLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRA 120
           CHLVNAD PQCRICLD GG+DLIAPCHCKGTQKYVHR CLDNWRSTKEGFAFAHCTECRA
Sbjct: 61  CHLVNADHPQCRICLDIGGDDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCTECRA 120

Query: 121 MFMIRANVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYE 180
           +F++RANVP DRWWLRLKFQFLVARDHAFIF+IVQLIVAFLGVLVYKFYGEELREMFGY+
Sbjct: 121 LFILRANVPPDRWWLRLKFQFLVARDHAFIFVIVQLIVAFLGVLVYKFYGEELREMFGYD 180

Query: 181 EHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKS 240
           EHPYGFY MAVLAI+LVGLLYGFFIAIICGQRINERHYHVLAKQELTKEY+VEDRE NK+
Sbjct: 181 EHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREDNKN 240

Query: 241 VPELDPRHVMELRMLGLY 253
           + ELDP HV ELRMLGLY
Sbjct: 241 ILELDPSHVTELRMLGLY 258

[Close]

BLAST of Cp4.1LG02g17630 vs. TrEMBL
Match: A0A0B2QR97_GLYSO (E3 ubiquitin-protein ligase MARCH1 OS=Glycine soja GN=glysoja_024892 PE=4 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 4.3e-113
Identity = 209/258 (81.01%), Postives = 221/258 (85.66%), Query Frame = 1


Query: 1   MQLAPNND-----ENAPILSQLDFQ-PQSVESSSPAEIIVIGRESSVTDDDLHNPNVDET 60
           MQLA N D     E+ PIL+      P   ESS   EII I   +S  DDDL N  VDET
Sbjct: 1   MQLASNGDKEECSESEPILNHHHLHLPPPGESSFSCEIIPISAAAS-GDDDLQNVRVDET 60

Query: 61  CHLVNADLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRA 120
           CHLVNAD PQCRICLD GGEDLIAPCHCKGTQKYVHR CLDNWRSTKEGFAF+HCTECRA
Sbjct: 61  CHLVNADQPQCRICLDIGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECRA 120

Query: 121 MFMIRANVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYE 180
           +F++RANVP DRWWLRLKFQFLVARDHAFIFIIVQL+VAFLGVLVYKFYG+ELREMFGYE
Sbjct: 121 VFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDELREMFGYE 180

Query: 181 EHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKS 240
           EHPYGFY MAVLAI+LVGLLYGFFIAIICGQRINERHYHVLAKQELTKEY+VEDREH K+
Sbjct: 181 EHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREHVKN 240

Query: 241 VPELDPRHVMELRMLGLY 253
           VPELDP HV ELRMLGLY
Sbjct: 241 VPELDPSHVTELRMLGLY 257

[Close]

BLAST of Cp4.1LG02g17630 vs. TrEMBL
Match: C6TC27_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G001100 PE=2 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 4.3e-113
Identity = 209/258 (81.01%), Postives = 221/258 (85.66%), Query Frame = 1


Query: 1   MQLAPNND-----ENAPILSQLDFQ-PQSVESSSPAEIIVIGRESSVTDDDLHNPNVDET 60
           MQLA N D     E+ PIL+      P   ESS   EII I   +S  DDDL N  VDET
Sbjct: 1   MQLASNGDKEECSESEPILNHHHLHLPPPGESSFSCEIIPISAAAS-GDDDLQNVRVDET 60

Query: 61  CHLVNADLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRA 120
           CHLVNAD PQCRICLD GGEDLIAPCHCKGTQKYVHR CLDNWRSTKEGFAF+HCTECRA
Sbjct: 61  CHLVNADQPQCRICLDIGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECRA 120

Query: 121 MFMIRANVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYE 180
           +F++RANVP DRWWLRLKFQFLVARDHAFIFIIVQL+VAFLGVLVYKFYG+ELREMFGYE
Sbjct: 121 VFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDELREMFGYE 180

Query: 181 EHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKS 240
           EHPYGFY MAVLAI+LVGLLYGFFIAIICGQRINERHYHVLAKQELTKEY+VEDREH K+
Sbjct: 181 EHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREHVKN 240

Query: 241 VPELDPRHVMELRMLGLY 253
           VPELDP HV ELRMLGLY
Sbjct: 241 VPELDPSHVTELRMLGLY 257

[Close]

BLAST of Cp4.1LG02g17630 vs. TrEMBL
Match: I1M615_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G372600 PE=4 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 5.6e-113
Identity = 210/260 (80.77%), Postives = 223/260 (85.77%), Query Frame = 1


Query: 1   MQLAPNND-----ENAPILSQ--LDFQPQSVESSSPAEIIVIGRESSV-TDDDLHNPNVD 60
           MQLA N D     E+ PIL+   L  QP   ESS   EII I   ++   DDDL N  VD
Sbjct: 1   MQLASNGDKEECSESEPILNHHHLHLQPTG-ESSFSCEIIPIPPAAATFNDDDLQNVRVD 60

Query: 61  ETCHLVNADLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTEC 120
           ETCHLVNAD PQCRICLD GGEDLIAPCHCKGTQKYVHR CLDNWRSTKEGFAF+HCTEC
Sbjct: 61  ETCHLVNADQPQCRICLDIGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFSHCTEC 120

Query: 121 RAMFMIRANVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFG 180
           RA+F++RANVP DRWWLRLKFQFLVARDHAFIFIIVQL+VAFLGVLVYKFYG+ELREMFG
Sbjct: 121 RAVFILRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLVVAFLGVLVYKFYGDELREMFG 180

Query: 181 YEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHN 240
           YEEHPYGFY MAVLAI+LVGLLYGFFIAIICGQRINERHYHVLAKQELTKEY+VEDREH 
Sbjct: 181 YEEHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREHV 240

Query: 241 KSVPELDPRHVMELRMLGLY 253
           K+VPELDP HV ELRMLGLY
Sbjct: 241 KNVPELDPSHVTELRMLGLY 259

[Close]

BLAST of Cp4.1LG02g17630 vs. TAIR10
Match: AT1G50440.1 (AT1G50440.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 364.4 bits (934), Expect = 5.7e-101
Identity = 185/256 (72.27%), Postives = 211/256 (82.42%), Query Frame = 1


Query: 1   MQLAPNNDENAPILSQLDFQPQSVESSSPAEIIVIGRESSVTDD----DLHNPNVDETCH 60
           MQL P++D++     Q+ F     ES+S  EI+   R   V ++    ++   + DET  
Sbjct: 1   MQLVPSDDDDDR-KEQILFD----ESTSSNEIVAAERGDRVVEEGQVSEIAETDDDETTL 60

Query: 61  LVNADLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMF 120
           LV+ D PQCRICLD GGEDLIAPC+CKGTQK+VHR CLDNWRSTKEGFAF+HCTECRA F
Sbjct: 61  LVSGDQPQCRICLDVGGEDLIAPCNCKGTQKHVHRSCLDNWRSTKEGFAFSHCTECRAFF 120

Query: 121 MIRANVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEH 180
            +RANVP DRWWLRL+FQ LVARDHAFIFI VQ+IVAFLG+LVYKFYGEELREMFGYEEH
Sbjct: 121 KLRANVPADRWWLRLRFQLLVARDHAFIFISVQMIVAFLGLLVYKFYGEELREMFGYEEH 180

Query: 181 PYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVP 240
           PYGFY +AVLAI+LVGLLYGFFIAIICGQ+INERHYHVLAKQELTKEYIVEDR+  K+VP
Sbjct: 181 PYGFYTLAVLAIVLVGLLYGFFIAIICGQKINERHYHVLAKQELTKEYIVEDRD-CKNVP 240

Query: 241 ELDPRHVMELRMLGLY 253
           ELD  HVMEL+MLGLY
Sbjct: 241 ELDQSHVMELKMLGLY 250

[Close]

BLAST of Cp4.1LG02g17630 vs. TAIR10
Match: AT2G22120.2 (AT2G22120.2 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 136.0 bits (341), Expect = 3.3e-32
Identity = 68/134 (50.75%), Postives = 88/134 (65.67%), Query Frame = 1


Query: 64  QCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVP 123
           QCRICL+T G D IAPC CKGT KYVHR CLD+WR+ KEGFAFAHCT C+A + +R +  
Sbjct: 34  QCRICLETDGRDFIAPCKCKGTSKYVHRDCLDHWRAIKEGFAFAHCTTCKAPYYLRVHSA 93

Query: 124 TDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVY---KFYGEELREMFGYEEHPYGF 183
            DR W  LKF+F V RD   IF+ VQL++A L  +VY    +    LR ++G++     +
Sbjct: 94  GDRKWRTLKFRFFVTRDILSIFLAVQLVIAALAYMVYFIDSYQQSWLRHIWGFDSEVTFY 153

Query: 184 YAM-AVLAIILVGL 194
           Y   A+L   L+GL
Sbjct: 154 YMCGALLFFALLGL 167

[Close]

BLAST of Cp4.1LG02g17630 vs. TAIR10
Match: AT1G11020.1 (AT1G11020.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 115.2 bits (287), Expect = 6.0e-26
Identity = 75/213 (35.21%), Postives = 107/213 (50.23%), Query Frame = 1


Query: 9   ENAPILSQLDFQPQSVESSSPAEIIVIGRESSVTDDDLHNPNVDETCHLVNADLPQCRIC 68
           ++AP+L   D    S  S S A ++    +    ++DL N      C         CRIC
Sbjct: 18  DSAPLLG--DHTNSSSASPSAASVVAGNSDEIKAEEDLENDASSAPC---------CRIC 77

Query: 69  LDTG----GEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPT 128
           L+      G++LI+PC CKGTQ++VHR CLD+WRS KEGFAF+HCT C+A F +R     
Sbjct: 78  LEDDSELLGDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVEPFE 137

Query: 129 DR--WWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGE-ELREMFG------YEE 188
           D   W  + KF+  VARD   +F+ VQ ++A +    Y    + E R  F         +
Sbjct: 138 DNNSWRRKAKFRLFVARDVLLVFLAVQTVIAVMAGFAYMMDKDGEFRNSFNDDWDRILSK 197

Query: 189 HPYGFYAMAVLAIILVGLLYGFFIAIICGQRIN 209
           HP  FY    + +I   +L GF   I+    +N
Sbjct: 198 HPIPFY--YCIGVISFFVLTGFLGIILHCSALN 217

[Close]

BLAST of Cp4.1LG02g17630 vs. TAIR10
Match: AT2G02960.5 (AT2G02960.5 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 48.1 bits (113), Expect = 9.1e-06
Identity = 30/89 (33.71%), Postives = 49/89 (55.06%), Query Frame = 1


Query: 14  LSQLDFQPQSVESSSPAEIIVIGRESSVTDDDLHNPNVDETCHLVNADLPQCRICLDTGG 73
           +S ++ + + + S SP   +V  +   ++DDD H+   DE   L+ +   +CRIC D   
Sbjct: 1   MSPVNAEVEEMRSESP---VVNDKALDISDDD-HD---DENEPLIVSG--ECRICSDESP 60

Query: 74  -EDLIAPCHCKGTQKYVHRLCLDNWRSTK 102
            E+L +PC C G+ KY HR C+  W + K
Sbjct: 61  VENLESPCACSGSLKYAHRKCVQRWCNEK 80

[Close]

BLAST of Cp4.1LG02g17630 vs. NCBI nr
Match: gi|778682365|ref|XP_011651697.1| (PREDICTED: E3 ubiquitin-protein ligase MARCH8 isoform X1 [Cucumis sativus])

HSP 1 Score: 469.9 bits (1208), Expect = 2.7e-129
Identity = 235/262 (89.69%), Postives = 242/262 (92.37%), Query Frame = 1


Query: 1   MQLAPNNDEN-------APILSQLDFQPQSVESSSPAEI---IVIGRESSVTDDDLHNPN 60
           MQL PN+DEN       APILSQLDF PQSV SSS AEI   I IGRESSV+DDDLHNPN
Sbjct: 1   MQLVPNHDENKDDILERAPILSQLDFLPQSVGSSSSAEIAEIIAIGRESSVSDDDLHNPN 60

Query: 61  VDETCHLVNADLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCT 120
           +DETCHLVN D PQCRICLDTGGEDLIAPCHCKGTQKYVHR CLDNWRSTKEGFAFAHCT
Sbjct: 61  IDETCHLVN-DQPQCRICLDTGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCT 120

Query: 121 ECRAMFMIRANVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREM 180
           ECRAMF++RANVP DRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREM
Sbjct: 121 ECRAMFVLRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREM 180

Query: 181 FGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDRE 240
           FGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDRE
Sbjct: 181 FGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDRE 240

Query: 241 HNKSVPELDPRHVMELRMLGLY 253
           HNK+VPELDP HVMELR+LGLY
Sbjct: 241 HNKNVPELDPSHVMELRLLGLY 261

[Close]

BLAST of Cp4.1LG02g17630 vs. NCBI nr
Match: gi|659130284|ref|XP_008465088.1| (PREDICTED: uncharacterized protein LOC103502787 isoform X1 [Cucumis melo])

HSP 1 Score: 467.2 bits (1201), Expect = 1.8e-128
Identity = 235/262 (89.69%), Postives = 241/262 (91.98%), Query Frame = 1


Query: 1   MQLAPNNDEN-------APILSQLDFQPQSVESSSPAEI---IVIGRESSVTDDDLHNPN 60
           MQL PN+DEN       APILSQLDF PQSV SSS AEI   I IGRESSV+DDDLHN N
Sbjct: 1   MQLVPNHDENKDDILERAPILSQLDFLPQSVGSSSSAEIAEIIAIGRESSVSDDDLHNLN 60

Query: 61  VDETCHLVNADLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCT 120
           +DETCHLVN D PQCRICLDTGGEDLIAPCHCKGTQKYVHR CLDNWRSTKEGFAFAHCT
Sbjct: 61  IDETCHLVN-DQPQCRICLDTGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCT 120

Query: 121 ECRAMFMIRANVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREM 180
           ECRAMF++RANVP DRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREM
Sbjct: 121 ECRAMFVLRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREM 180

Query: 181 FGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDRE 240
           FGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDRE
Sbjct: 181 FGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDRE 240

Query: 241 HNKSVPELDPRHVMELRMLGLY 253
           HNK+VPELDP HVMELRMLGLY
Sbjct: 241 HNKNVPELDPSHVMELRMLGLY 261

[Close]

BLAST of Cp4.1LG02g17630 vs. NCBI nr
Match: gi|778682379|ref|XP_011651701.1| (PREDICTED: uncharacterized protein LOC101221632 isoform X2 [Cucumis sativus])

HSP 1 Score: 434.9 bits (1117), Expect = 9.7e-119
Identity = 220/262 (83.97%), Postives = 227/262 (86.64%), Query Frame = 1


Query: 1   MQLAPNNDEN-------APILSQLDFQPQSVESSSPAEI---IVIGRESSVTDDDLHNPN 60
           MQL PN+DEN       APILSQLDF PQSV SSS AEI   I IGRESSV+DDDLHNPN
Sbjct: 1   MQLVPNHDENKDDILERAPILSQLDFLPQSVGSSSSAEIAEIIAIGRESSVSDDDLHNPN 60

Query: 61  VDETCHLVNADLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCT 120
           +DETCHLVN D PQCRICLDTGGEDLIAPCHCKGTQKYVHR CLDNWRSTKEGFAFAHCT
Sbjct: 61  IDETCHLVN-DQPQCRICLDTGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCT 120

Query: 121 ECRAMFMIRANVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREM 180
           ECRAMF++RANVP DRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREM
Sbjct: 121 ECRAMFVLRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREM 180

Query: 181 FGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDRE 240
           FGYEEHPYGFYAMA               AIICGQRINERHYHVLAKQELTKEYIVEDRE
Sbjct: 181 FGYEEHPYGFYAMA---------------AIICGQRINERHYHVLAKQELTKEYIVEDRE 240

Query: 241 HNKSVPELDPRHVMELRMLGLY 253
           HNK+VPELDP HVMELR+LGLY
Sbjct: 241 HNKNVPELDPSHVMELRLLGLY 246

[Close]

BLAST of Cp4.1LG02g17630 vs. NCBI nr
Match: gi|659130298|ref|XP_008465095.1| (PREDICTED: uncharacterized protein LOC103502787 isoform X2 [Cucumis melo])

HSP 1 Score: 432.2 bits (1110), Expect = 6.3e-118
Identity = 220/262 (83.97%), Postives = 226/262 (86.26%), Query Frame = 1


Query: 1   MQLAPNNDEN-------APILSQLDFQPQSVESSSPAEI---IVIGRESSVTDDDLHNPN 60
           MQL PN+DEN       APILSQLDF PQSV SSS AEI   I IGRESSV+DDDLHN N
Sbjct: 1   MQLVPNHDENKDDILERAPILSQLDFLPQSVGSSSSAEIAEIIAIGRESSVSDDDLHNLN 60

Query: 61  VDETCHLVNADLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCT 120
           +DETCHLVN D PQCRICLDTGGEDLIAPCHCKGTQKYVHR CLDNWRSTKEGFAFAHCT
Sbjct: 61  IDETCHLVN-DQPQCRICLDTGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCT 120

Query: 121 ECRAMFMIRANVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREM 180
           ECRAMF++RANVP DRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREM
Sbjct: 121 ECRAMFVLRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREM 180

Query: 181 FGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDRE 240
           FGYEEHPYGFYAMA               AIICGQRINERHYHVLAKQELTKEYIVEDRE
Sbjct: 181 FGYEEHPYGFYAMA---------------AIICGQRINERHYHVLAKQELTKEYIVEDRE 240

Query: 241 HNKSVPELDPRHVMELRMLGLY 253
           HNK+VPELDP HVMELRMLGLY
Sbjct: 241 HNKNVPELDPSHVMELRMLGLY 246

[Close]

BLAST of Cp4.1LG02g17630 vs. NCBI nr
Match: gi|590617171|ref|XP_007023714.1| (RING/FYVE/PHD zinc finger superfamily protein isoform 2 [Theobroma cacao])

HSP 1 Score: 424.5 bits (1090), Expect = 1.3e-115
Identity = 208/258 (80.62%), Postives = 223/258 (86.43%), Query Frame = 1


Query: 1   MQLAPNND------ENAPILSQLDFQPQSVESSSPAEIIVIGRESSVTDDDLHNPNVDET 60
           MQL  N+       E+ PIL Q D   +S E SS  EI  IG +S V DDDL + NVDET
Sbjct: 1   MQLVSNDSQKEDILESEPILCQSDISQRSEECSSSCEITAIGGDSVVVDDDLEDINVDET 60

Query: 61  CHLVNADLPQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRA 120
           CHLVNAD PQCRICLD GG+DLIAPCHCKGTQKYVHR CLDNWRSTKEGFAFAHCTECRA
Sbjct: 61  CHLVNADHPQCRICLDIGGDDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCTECRA 120

Query: 121 MFMIRANVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYE 180
           +F++RANVP DRWWLRLKFQFLVARDHAFIF+IVQLIVAFLGVLVYKFYGEELREMFGY+
Sbjct: 121 LFILRANVPPDRWWLRLKFQFLVARDHAFIFVIVQLIVAFLGVLVYKFYGEELREMFGYD 180

Query: 181 EHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKS 240
           EHPYGFY MAVLAI+LVGLLYGFFIAIICGQRINERHYHVLAKQELTKEY+VEDRE NK+
Sbjct: 181 EHPYGFYTMAVLAIVLVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYVVEDREDNKN 240

Query: 241 VPELDPRHVMELRMLGLY 253
           + ELDP HV ELRMLGLY
Sbjct: 241 ILELDPSHVTELRMLGLY 258

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g17630 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MARH3_RAT	7.7e-07	36.62	E3 ubiquitin-protein ligase MARCH3 OS=Rattus norvegicus GN=March3 PE=1 SV=1	[more]
MARH3_MOUSE	7.7e-07	36.62	E3 ubiquitin-protein ligase MARCH3 OS=Mus musculus GN=March3 PE=2 SV=1	[more]
MARH3_BOVIN	7.7e-07	36.62	E3 ubiquitin-protein ligase MARCH3 OS=Bos taurus GN=MARCH3 PE=2 SV=1	[more]
MARH3_HUMAN	7.7e-07	36.62	E3 ubiquitin-protein ligase MARCH3 OS=Homo sapiens GN=MARCH3 PE=1 SV=1	[more]
MARH3_XENTR	1.3e-06	36.62	E3 ubiquitin-protein ligase MARCH3 OS=Xenopus tropicalis GN=march3 PE=2 SV=1	[more]

BLAST of Cp4.1LG02g17630 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LE97_CUCSA	1.9e-129	89.69	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G640630 PE=4 SV=1	[more]
A0A061G9T2_THECC	9.2e-116	80.62	RING/FYVE/PHD zinc finger superfamily protein isoform 2 OS=Theobroma cacao GN=TC...	[more]
A0A0B2QR97_GLYSO	4.3e-113	81.01	E3 ubiquitin-protein ligase MARCH1 OS=Glycine soja GN=glysoja_024892 PE=4 SV=1	[more]
C6TC27_SOYBN	4.3e-113	81.01	Uncharacterized protein OS=Glycine max GN=GLYMA_15G001100 PE=2 SV=1	[more]
I1M615_SOYBN	5.6e-113	80.77	Uncharacterized protein OS=Glycine max GN=GLYMA_13G372600 PE=4 SV=1	[more]

BLAST of Cp4.1LG02g17630 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G50440.1	5.7e-101	72.27	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G22120.2	3.3e-32	50.75	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G11020.1	6.0e-26	35.21	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G02960.5	9.1e-06	33.71	RING/FYVE/PHD zinc finger superfamily protein	[more]

BLAST of Cp4.1LG02g17630 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778682365\|ref\|XP_011651697.1\|	2.7e-129	89.69	PREDICTED: E3 ubiquitin-protein ligase MARCH8 isoform X1 [Cucumis sativus]	[more]
gi\|659130284\|ref\|XP_008465088.1\|	1.8e-128	89.69	PREDICTED: uncharacterized protein LOC103502787 isoform X1 [Cucumis melo]	[more]
gi\|778682379\|ref\|XP_011651701.1\|	9.7e-119	83.97	PREDICTED: uncharacterized protein LOC101221632 isoform X2 [Cucumis sativus]	[more]
gi\|659130298\|ref\|XP_008465095.1\|	6.3e-118	83.97	PREDICTED: uncharacterized protein LOC103502787 isoform X2 [Cucumis melo]	[more]
gi\|590617171\|ref\|XP_007023714.1\|	1.3e-115	80.62	RING/FYVE/PHD zinc finger superfamily protein isoform 2 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR011016	Znf_RING-CH

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG02g17630.1	Cp4.1LG02g17630.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 65..112 score: 7.5
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 64..113 score: 2.7
IPR011016	Zinc finger, RING-CH-type	PROFILE	PS51292	ZF_RING_CH	coord: 57..119 score: 19
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 61..117 score: 3.4
None	No IPR available	PANTHER	PTHR23012:SF65	SUBFAMILY NOT NAMED	coord: 9..249 score: 1.7E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 61..116 score: 2.93

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG02g17630	Cucsa.149680	Cucumber (Gy14) v1	cgycpeB0401
Cp4.1LG02g17630	CmaCh14G011880	Cucurbita maxima (Rimu)	cmacpeB282
Cp4.1LG02g17630	CmaCh01G000020	Cucurbita maxima (Rimu)	cmacpeB491
Cp4.1LG02g17630	CmoCh14G012120	Cucurbita moschata (Rifu)	cmocpeB244
Cp4.1LG02g17630	CmoCh01G000020	Cucurbita moschata (Rifu)	cmocpeB449
Cp4.1LG02g17630	Csa3G640630	Cucumber (Chinese Long) v2	cpecuB559
Cp4.1LG02g17630	ClCG07G014630	Watermelon (Charleston Gray)	cpewcgB524
Cp4.1LG02g17630	CSPI03G28150	Wild cucumber (PI 183967)	cpecpiB561
Cp4.1LG02g17630	Lsi07G006750	Bottle gourd (USVL1VR-Ls)	cpelsiB472
Cp4.1LG02g17630	CsaV3_3G030540	Cucumber (Chinese Long) v3	cpecucB0697
Cp4.1LG02g17630	Bhi01G002249	Wax gourd	cpewgoB0675
Cp4.1LG02g17630	CsGy3G026170	Cucumber (Gy14) v2	cgybcpeB391
Cp4.1LG02g17630	Carg04356	Silver-seed gourd	carcpeB0285

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG02g17630	Cp4.1LG03g15080	Cucurbita pepo (Zucchini)	cpecpeB451

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG02g17630	Wax gourd	cpewgoB0683
Cp4.1LG02g17630	Cucurbita pepo (Zucchini)	cpecpeB122
Cp4.1LG02g17630	Cucumber (Gy14) v1	cgycpeB0277
Cp4.1LG02g17630	Wild cucumber (PI 183967)	cpecpiB545
Cp4.1LG02g17630	Cucumber (Chinese Long) v2	cpecuB543
Cp4.1LG02g17630	Watermelon (Charleston Gray)	cpewcgB494
Cp4.1LG02g17630	Watermelon (97103) v1	cpewmB557
Cp4.1LG02g17630	Watermelon (97103) v1	cpewmB583
Cp4.1LG02g17630	Melon (DHL92) v3.5.1	cpemeB520
Cp4.1LG02g17630	Melon (DHL92) v3.5.1	cpemeB527
Cp4.1LG02g17630	Cucumber (Gy14) v2	cgybcpeB225
Cp4.1LG02g17630	Melon (DHL92) v3.6.1	cpemedB618
Cp4.1LG02g17630	Melon (DHL92) v3.6.1	cpemedB626