CmaCh14G011880 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAACTGGTACCAAATAATGATGAAAATACAGATGATATTCTGGAACGGGCGCCCATTTTAAGTCAATTGGATTTTCTGCCACAGTCAGTGGGATCATCATCCTCTGCTGAGATTATAGCTATAGGGAGAGAGAGCTCTGGTAGTGATGATGATTTACACAATCTTAATGTTGATGAAACCAGTCATCTGGTGAATGCAGACCAACCACAATGTCGTATATGCCTTGACACTGGAGGTTTTTAACATTTCTTTCTGTTCAATATGTAATGCAATTTCATCAATTTCAATTAAGACTGTGTTCCACTAATATTATTTTAACAAAGCAAGAACATTACACTTACGTTCACTTGTAGGTTAAGACAGTGTCAGTACATGTATGTATATTCTGTTTTTCTTCTTCTGAAGCTTCGATTTACTATTTTTAGTATGAAAATGAATTTGGTTTCAGGAGAAGATTTAATTGCTCCATGCCACTGCAAAGGCACTCAGAAGTATGTCCATAGATCATGTCTTGATAATTGGAGGTCCACAAAGGTCAGTTTTCCCTCATTTCATATTGCTTCTCTACAGTTAATCAACACTCTTTTTCTGGGGCCATGGACTGTGGTATCGAGTGCTACCAAATCATAAAACTTCCACGGGCTGATAACCTATCTAACACATCTCCTTTCATATATCTTTCAAACATGTCAAATTCTAGAATGATCAAGTTTTCAAGTTTTTTTTTTTTTTTTAATTCTAATCCATTTGAGTAATTGTATCAGGAGGGCTTTGCTTTTGCTCATTGTACAGAGTGCAGAGCTATGTTCGTGTTACGTGCAAATGTCCCTCCTGATCGCTGGTGGTTGAGACTGAAGTTTCAATTTCTTGTTGCTAGGGACCATGCGTTCATTTTCATTATTGTTCAACTGGTAAACTATTGTAATTATATGTTTAGTTTGGCCATCCACTTTTCTGCCAAGGTGTTTAGTTCAAGTTTGGCTAAATATCCTTCATTATCATTATGATATAAATTCATTTCATTGTTATGATTGATTTTTCTAGAGGGGTCTTCGCTATGTGCTTTGAACAGATTGTGGCATTCTTGGGGGTGTTGGTGTACAAATTCTACGGAGAGGAACTAAGGGAAATGTTTGGTTATGAAGAACACCCATATGGGTTCTATGCCATGGCTGGTATACTGAGGCTGCCAACTAATACCTTATTTTTTATTCTTCTTTATATATGTATTGAATTTTATAGTGCAAGTGAATGTTCTCACACAATATTTTGGTTTCATTTGATTAGAAAAATTTAGGATTAGCAGTTGAATGAATCCTTGCCTGAAATCAAGTACTGGCTTTAGAAAATGTAGCTGCTCTACTATCTTTCTTTTTAATTCATCGTTCTACAATATCTTTTCTGCAGTCTTGGCGATCATCTTGGTTGGCTTACTCTATGGTTTCTTCATAGCCATTATATGCGGGCAGAGGATAAATGAACGCCACTACCATGTCCTTGCTAAGCAAGAACTAACAAAGGTCCAGTAACGATTTTAAAGAGAATAATATTGTTAAGTTATTTCCATTTTATCTCATTTCATCTCTCCAATATTGGGAACTGTTGGGTTCCTTCATTCTTCTCAAATTGTCAAAATCCTTCTGCTTACTAAGCTGATAATAGCTTTCTTGGTTTCAGGAATATATAGTTGAAGATCGAGAACAAAACAAGAACGTTCCTGAATTAGACCCCAGCCATGTTATGGAGCTAAGAATGTTGGGGCTGTATTAATCTGAAATTGGTGAATCCAACACGGGCACTTGAAGTCTTCAAGTAAGGAACTCTATCCTGTATTCCTTTCCACTCCTATGTATCGCAAGTGGAGAATTAGAAAAAATAGGTAGAGTTGGCTCACCATTACGTTGCATAATCTTTTGCAACTTGAGATTTTAATTTGTATTATACTGCAAGAATCCCCATATAATTGGAGGCTTTCATTTTTTGATTTCGTGACCTTAGACGTACTTTTGTGTTTGACCAAACAAAGCAAATTTTCCCTTCTGGTTTGATCTTGTTTGAACAAATAACTGCAATGAAAGACCTTAATATTTGAATGGTTTAAA ATGCAACTGGTACCAAATAATGATGAAAATACAGATGATATTCTGGAACGGGCGCCCATTTTAAGTCAATTGGATTTTCTGCCACAGTCAGTGGGATCATCATCCTCTGCTGAGATTATAGCTATAGGGAGAGAGAGCTCTGGTAGTGATGATGATTTACACAATCTTAATGTTGATGAAACCAGTCATCTGGTGAATGCAGACCAACCACAATGTCGTATATGCCTTGACACTGGAGGAGAAGATTTAATTGCTCCATGCCACTGCAAAGGCACTCAGAAGTATGTCCATAGATCATGTCTTGATAATTGGAGGTCCACAAAGGAGGGCTTTGCTTTTGCTCATTGTACAGAGTGCAGAGCTATGTTCGTGTTACGTGCAAATGTCCCTCCTGATCGCTGGTGGTTGAGACTGAAGTTTCAATTTCTTGTTGCTAGGGACCATGCGTTCATTTTCATTATTGTTCAACTGATTGTGGCATTCTTGGGGGTGTTGGTGTACAAATTCTACGGAGAGGAACTAAGGGAAATGTTTGGTTATGAAGAACACCCATATGGGTTCTATGCCATGGCTGTCTTGGCGATCATCTTGGTTGGCTTACTCTATGGTTTCTTCATAGCCATTATATGCGGGCAGAGGATAAATGAACGCCACTACCATGTCCTTGCTAAGCAAGAACTAACAAAGGAATATATAGTTGAAGATCGAGAACAAAACAAGAACGTTCCTGAATTAGACCCCAGCCATGTTATGGAGCTAAGAATGTTGGGGCTGTATTAATCTGAAATTGGTGAATCCAACACGGGCACTTGAAGTCTTCAAGTAAGGAACTCTATCCTGTATTCCTTTCCACTCCTATGTATCGCAAGTGGAGAATTAGAAAAAATAGGTAGAGTTGGCTCACCATTACGTTGCATAATCTTTTGCAACTTGAGATTTTAATTTGTATTATACTGCAAGAATCCCCATATAATTGGAGGCTTTCATTTTTTGATTTCGTGACCTTAGACGTACTTTTGTGTTTGACCAAACAAAGCAAATTTTCCCTTCTGGTTTGATCTTGTTTGAACAAATAACTGCAATGAAAGACCTTAATATTTGAATGGTTTAAA ATGCAACTGGTACCAAATAATGATGAAAATACAGATGATATTCTGGAACGGGCGCCCATTTTAAGTCAATTGGATTTTCTGCCACAGTCAGTGGGATCATCATCCTCTGCTGAGATTATAGCTATAGGGAGAGAGAGCTCTGGTAGTGATGATGATTTACACAATCTTAATGTTGATGAAACCAGTCATCTGGTGAATGCAGACCAACCACAATGTCGTATATGCCTTGACACTGGAGGAGAAGATTTAATTGCTCCATGCCACTGCAAAGGCACTCAGAAGTATGTCCATAGATCATGTCTTGATAATTGGAGGTCCACAAAGGAGGGCTTTGCTTTTGCTCATTGTACAGAGTGCAGAGCTATGTTCGTGTTACGTGCAAATGTCCCTCCTGATCGCTGGTGGTTGAGACTGAAGTTTCAATTTCTTGTTGCTAGGGACCATGCGTTCATTTTCATTATTGTTCAACTGATTGTGGCATTCTTGGGGGTGTTGGTGTACAAATTCTACGGAGAGGAACTAAGGGAAATGTTTGGTTATGAAGAACACCCATATGGGTTCTATGCCATGGCTGTCTTGGCGATCATCTTGGTTGGCTTACTCTATGGTTTCTTCATAGCCATTATATGCGGGCAGAGGATAAATGAACGCCACTACCATGTCCTTGCTAAGCAAGAACTAACAAAGGAATATATAGTTGAAGATCGAGAACAAAACAAGAACGTTCCTGAATTAGACCCCAGCCATGTTATGGAGCTAAGAATGTTGGGGCTGTATTAA MQLVPNNDENTDDILERAPILSQLDFLPQSVGSSSSAEIIAIGRESSGSDDDLHNLNVDETSHLVNADQPQCRICLDTGGEDLIAPCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCTECRAMFVLRANVPPDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREQNKNVPELDPSHVMELRMLGLY
BLAST of CmaCh14G011880 vs. Swiss-Prot
Match: MARH3_RAT (E3 ubiquitin-protein ligase MARCH3 OS=Rattus norvegicus GN=March3 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.4e-08 Identity = 28/71 (39.44%), Postives = 40/71 (56.34%), Query Frame = 1
BLAST of CmaCh14G011880 vs. Swiss-Prot
Match: MARH3_MOUSE (E3 ubiquitin-protein ligase MARCH3 OS=Mus musculus GN=March3 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.4e-08 Identity = 28/71 (39.44%), Postives = 40/71 (56.34%), Query Frame = 1
BLAST of CmaCh14G011880 vs. Swiss-Prot
Match: MARH3_HUMAN (E3 ubiquitin-protein ligase MARCH3 OS=Homo sapiens GN=MARCH3 PE=1 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.4e-08 Identity = 28/71 (39.44%), Postives = 40/71 (56.34%), Query Frame = 1
BLAST of CmaCh14G011880 vs. Swiss-Prot
Match: MARH3_BOVIN (E3 ubiquitin-protein ligase MARCH3 OS=Bos taurus GN=MARCH3 PE=2 SV=1) HSP 1 Score: 61.6 bits (148), Expect = 1.4e-08 Identity = 28/71 (39.44%), Postives = 40/71 (56.34%), Query Frame = 1
BLAST of CmaCh14G011880 vs. Swiss-Prot
Match: MARH3_XENTR (E3 ubiquitin-protein ligase MARCH3 OS=Xenopus tropicalis GN=march3 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 4.2e-08 Identity = 28/71 (39.44%), Postives = 40/71 (56.34%), Query Frame = 1
BLAST of CmaCh14G011880 vs. TrEMBL
Match: A0A0A0LE97_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G640630 PE=4 SV=1) HSP 1 Score: 499.6 bits (1285), Expect = 2.3e-138 Identity = 250/262 (95.42%), Postives = 253/262 (96.56%), Query Frame = 1
BLAST of CmaCh14G011880 vs. TrEMBL
Match: A0A061G9T2_THECC (RING/FYVE/PHD zinc finger superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_027833 PE=4 SV=1) HSP 1 Score: 442.6 bits (1137), Expect = 3.3e-121 Identity = 217/259 (83.78%), Postives = 231/259 (89.19%), Query Frame = 1
BLAST of CmaCh14G011880 vs. TrEMBL
Match: B9RHV4_RICCO (Membrane associated ring finger 1,8, putative OS=Ricinus communis GN=RCOM_1573880 PE=4 SV=1) HSP 1 Score: 430.6 bits (1106), Expect = 1.3e-117 Identity = 210/259 (81.08%), Postives = 230/259 (88.80%), Query Frame = 1
BLAST of CmaCh14G011880 vs. TrEMBL
Match: A0A0B0N0C8_GOSAR (E3 ubiquitin-protein ligase MARCH8 OS=Gossypium arboreum GN=F383_29230 PE=4 SV=1) HSP 1 Score: 427.9 bits (1099), Expect = 8.5e-117 Identity = 210/259 (81.08%), Postives = 225/259 (86.87%), Query Frame = 1
BLAST of CmaCh14G011880 vs. TrEMBL
Match: A0A0B2QR97_GLYSO (E3 ubiquitin-protein ligase MARCH1 OS=Glycine soja GN=glysoja_024892 PE=4 SV=1) HSP 1 Score: 427.2 bits (1097), Expect = 1.5e-116 Identity = 214/260 (82.31%), Postives = 227/260 (87.31%), Query Frame = 1
BLAST of CmaCh14G011880 vs. TAIR10
Match: AT1G50440.1 (AT1G50440.1 RING/FYVE/PHD zinc finger superfamily protein) HSP 1 Score: 373.2 bits (957), Expect = 1.3e-103 Identity = 195/263 (74.14%), Postives = 217/263 (82.51%), Query Frame = 1
BLAST of CmaCh14G011880 vs. TAIR10
Match: AT2G22120.2 (AT2G22120.2 RING/FYVE/PHD zinc finger superfamily protein) HSP 1 Score: 139.8 bits (351), Expect = 2.3e-33 Identity = 70/137 (51.09%), Postives = 90/137 (65.69%), Query Frame = 1
BLAST of CmaCh14G011880 vs. TAIR10
Match: AT1G11020.1 (AT1G11020.1 RING/FYVE/PHD zinc finger superfamily protein) HSP 1 Score: 121.3 bits (303), Expect = 8.6e-28 Identity = 84/228 (36.84%), Postives = 119/228 (52.19%), Query Frame = 1
BLAST of CmaCh14G011880 vs. NCBI nr
Match: gi|659130284|ref|XP_008465088.1| (PREDICTED: uncharacterized protein LOC103502787 isoform X1 [Cucumis melo]) HSP 1 Score: 503.4 bits (1295), Expect = 2.3e-139 Identity = 252/262 (96.18%), Postives = 254/262 (96.95%), Query Frame = 1
BLAST of CmaCh14G011880 vs. NCBI nr
Match: gi|778682365|ref|XP_011651697.1| (PREDICTED: E3 ubiquitin-protein ligase MARCH8 isoform X1 [Cucumis sativus]) HSP 1 Score: 499.6 bits (1285), Expect = 3.3e-138 Identity = 250/262 (95.42%), Postives = 253/262 (96.56%), Query Frame = 1
BLAST of CmaCh14G011880 vs. NCBI nr
Match: gi|659130298|ref|XP_008465095.1| (PREDICTED: uncharacterized protein LOC103502787 isoform X2 [Cucumis melo]) HSP 1 Score: 468.8 bits (1205), Expect = 6.3e-129 Identity = 237/262 (90.46%), Postives = 239/262 (91.22%), Query Frame = 1
BLAST of CmaCh14G011880 vs. NCBI nr
Match: gi|778682379|ref|XP_011651701.1| (PREDICTED: uncharacterized protein LOC101221632 isoform X2 [Cucumis sativus]) HSP 1 Score: 464.9 bits (1195), Expect = 9.0e-128 Identity = 235/262 (89.69%), Postives = 238/262 (90.84%), Query Frame = 1
BLAST of CmaCh14G011880 vs. NCBI nr
Match: gi|590617171|ref|XP_007023714.1| (RING/FYVE/PHD zinc finger superfamily protein isoform 2 [Theobroma cacao]) HSP 1 Score: 442.6 bits (1137), Expect = 4.8e-121 Identity = 217/259 (83.78%), Postives = 231/259 (89.19%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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