CmaCh01G000020 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G000020
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Zinc finger protein
Location	Cma_Chr01 : 5881 .. 11201 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

NNGGGGGGGGGGAGATCATCCTCTGCTATGGAAATGGGATCTCAGTCTTGGCTTCCCAGCTGAATCACTAGCGCCATTACTTCCATCGATACCTTTGATTCAGTCACTGACTTTTCTCTCACTCTCCTTCCCTTTACAGGTACTTTCTACTCTTAATCAATCATCCACCCCTTATCCGCATTTCTATTTCTGATTGTCTTTTTAGATCTTTTCCATTTTCCCCCGTTTTCGTACCACTGGGTGATGATTTTATGATCTGGGTTTTCCAATTTGATCCTTTTCAGATGACTTTTGACTGTAGATGGGATTAATCAGAAATGGGTTACTTCTGGATTCTTTGTTTAATTGCCCTCCGCTCTGGAATTGATCACCAACTCTCCTTTACAGAGGGATACCATGGTTTTACATTTTTTTTTCTTTGATTTCAACTGTGGACTCCATCAGTATGAAGAATGTGGTCGACCTTTATTTCATTATTTTTTCTGAATTTTTTCTTTGAGCTATGATTCTATCATCTCCTTACACTCCTAGATTTGAAGTCGTTTGAGGGTTGTCATCATGGAGGATGTTCGATAAGGAGAAGATGTAGTCCTAGAAGTCTGCGTTCAGTGTGGATAACCTTGTGACAGATGAAATTCTGCCTATCTTGATCTAGGAGAATGTATTTGAAGCTGAGTTTTCTTTTAAGTTTTCTTTTGTTCTCGGACATGTTCATGTAGTTAAGCGTCCATTTCGAAGCTCAGTGTATGCTTAAGGTTGCAGAGAAGGAAACTGTAAGCTAGAAACATAAAGCCATGCTTTTTCCATAGGGTGGGTAGCGGGAGAAGCAGTAAGAATTTCATTGACCCCTTGGAGGATGAGATGAGAATGTTGGTTAAGGAGGAGAATGAGATTGAGCCCTTGGAGGATAATGGGTTCTCACGGCCTTCTTTCAGGACAATTGGGTGGGCATAAAAGAGGACTTGATGCGGGTGCTGATGTTCTTTGAATGAGGCATTTTGGATAACTCTCTAAATCAGACTTTTGTTTGAAGAAGTGAGGGCAAACAAGGTTAAGGACTTTAGACCCATCAACTTGGTTGTGAGATTGGCACTTCCCCTTGTCTTATTTAGGTTTCCCTATTGACCATAAACCGATTTTTTTTTTTACAAGAGTATAGATTTACTTTTATCTATTTAGTTTTTATCCGTCTACTTCTTTTCCCTTTTTAGAGCCCCCAATTCTGTTTCTAAGTCTTTAGAGAAGCTTACAAGGTATTTACCATCGGAAGGGGTCAACGAGGGTAGGAGTGTGAATTGGGTAAATTGGGACTTAGGTGGGGAAGCCAGAGTATCTTGAGGGACTCAAGTTAAGAGAATTTAAGAATCCCAAACAAAGTCTTGCGGGCTAAATGACTTTAATTGTAACGACCCACTTTCCACATGGATCACCACATGGACTCGGGTCAAGGAAATTTGACAAGTTTTTGAAGAGAATAACATTAAAATAATATTAAAAGTAACATGGATGGAAGAGACTCAATCTATGGCCCCTCCCGCAGTCGCACGACTCCGTATGCTCCCACCATCGACTGTGGCTTACGCTCCATCTAAAAATATAGAATAATATGAGATGAGTATAAAATACTCATTAGGCAACCAACTTGTAAGCTCTTGTTAGACTCATTCCTATACATGAAAGCTTAGGCTATGTGTTCGTAATTGTCCCTAAAGGTATCCAAACTACAAAACTATGTACTAAACCCTCCGCATAAACCCTCAGCATACCTCCTTTAAGGAGTACCCAATCCCCTTTGGGGTTCATAACCGATGAGTTTTTTTATCTCTCTTAGTTCTATGTTTAACGTATATCTGGTTCCTTTGTCAATCTTGCGCGAATTGCACCTCGAGTCACTATGACTCATGGAAGGGCCCTAGGATCCTAAGTCTAGAGGAGCCCTTTAGTTCTTTCTCCTTTCAAACACGCTTCTATCGCCGACAGTGTTGTCGATGGTGATAGTATGCGGTGGCAGCTGAAAACGTCTTATCTTTATTATTATTATTTTTTTTTAATTTTCTAGCTGTCGTCACTTTCCCTCTTCTTTATTTCAAATACACTGATCATCACATTAACGATTCCCGGTTGAGCCTAAAACCCCCTCATCTGTTCGAGTGGGTGCTTAGTGGGGATAAAGGCACTTAAAAAATCCTTGGAAGGCGTCTACTTTGAGCCCCCTTCCTTTTCTCTTCTGGTCTAGTTCTCCATGGAGGATATATGAACCGTTCCTAATTTGAGGATAGAAATTTGGAGTACTTTCTGCATTGATGAATAAGATTGGCTAATTGGCAAGCTTGGTAGTTCGTTACATCAGCTCCAAAAGAATAAGTTACATTGGAATTCAGAAAATTCTATGAGTTCTTAGTTGCATTAATGAAGAAGATATAGAGGTTGTGGCCACTGGCAAGGCATTTCTACACCCGCCCTTATCTGCCAGAAGAATTGATGAACCGGCAAGGCTTCAACATAAGGGAGCAGGAATTACAACTAAGAGCAACCTTTGTGCTTAGGAAGTACTAGCTAAGCTATACCTATTTCTCACGGGTAGGTTAGGTGCCAGGAGCTTGCTTCTATCCCTAACCAATTACAATAAATAGTTGTGGTTGTGGCACCCTAAGTAACCTCAACCTCAAGCACTAGTATAATGAAGTATCAACATTCACACTACAGGTTTTGCAGTGATAACTTTTATCCGAGGCCAAGTACATTCCTTATTACTAAAATAAAGAATTAAGGTTACATATAAGGTAACCTCCACCTAGATTTGGTATATAAAGAAATTGTCATTGCCAGTTACGAAAGACAATGATATTATCCTACAGTTAACTGTATATCTTTGATCTTCTATGTGGATAATTTCGTGCAAACTTGATTACTCTGATTTCCACAATTATGCAGGTTCGTTAATTTTCATGTAAATGATCAACCTGAGCAGTAGCTCAAGCGATGACTTTACAAGTCTGATTCAAGAGGTAGGCTCCACACAATGCAACTGGCACCAAATAATGATGAAAATGCACACATTTTAAGTCAATTGGATTTTCAGCCACAATCTGTGGAATCGTCATCCCCAAATGAGATTATTGTCATAGGGAGAGAGAGCTCCGTTACGGAAGATGATTTACACAATCTTAACGTTGATGAAACTTGTCACCTGGTGAACGCAGACCTACTGCAATGTCGGATATGCCTTGACACCGGAGGTTTTTAACATTCTTTTTTTTTTTTTTTGTTCAATATGCAACGCAATTTTCATCAACATCAGTTAAGACGGTGTTTGTCACATTTTTTTTAACAAATAAAAATATTTTCTTCAGTGAGTTAAGATTGTCACTACATATTTTGTTTTCTTTTCTTCTGAAGCTTCGATCTCCTGAATTTTCTTTCAGGAGAAGATTTAATCGCGCCATGCCACTGCAAAGGCACTCAGAAGTATGTCCATAGATTATGTCTTGATAATTGGAGGTCCACAAAGGTCCGTTTTCCCGAATCTCTCTATTCTTAATTGTCATTCCCTTCACCGCTAGTAGATATTGTCCATTATGCTCCGTGATATATCATCGTCAGTCTCACGATTTTAAAATGCACCTACTAGGAAGTTCTACTCTCTTATTAGGAATGCTTCGTTTCCCTCTTCAACCAATGTGGGATCTCACGATCCACCACCCCCTTAGGAACCAAGCGTCCTTATGGCACACTACCTGGTAACTGGCCCTAATACCATTTGTAACAACTTAAGCCCACTGCTATCAAATATTGTCAGTTTTGGCCCATTACGTATCGTCGTCAACCCCGCGATTTTAAAATGCGCCTACTAGGGAGAAGTTTTCACATCCTTATAAGGAATGTTTCGTTTCCCACTTCAACCAATGTGAGATCTCATAGTTGGTTAGAGTCTGCATCGGTTGGAGAGAGAAACGAAACATTACTTATAAGAGTGTGAAAACATCTCCGTTTTAAAATCGTGAGGCTGACAGCGATACATAACCGGCCGAAGCAAACAATATCTACTAATAGTGGGCTTGGACGGTTACAAATAGTATTTAAATGGCTCAAACGATGTGCCAACAAAGACGCTGGGCCTCCAAGAATGGTGGATTATGAGATCTAACATTGGAATAGCAATACGTAACATGTCAAAGCAGACAATATCTGCTAGCAGGAGGACTTTCATTACCAATCTAATGCATCTGCTTTCATAGACGTTCCAAACAAGTGGGTGTTCGATAATGAAGTTTTCAAGGTTTTTGGCTTCTAATCCATTTCAGTAATTCTGTCAGGAGGGCTTTGCTTTTGCTCATTGTACAGAGTGCAGAGCTATGTTCATGATACGTGCAAATGTCCCTACTGATCGCTGGTGGTTAAGACTGAAGTTTCAGTTTCTCGTTGCTAGAGACCATGCGTTCATTTTCATCATTGTTCAGCTGGTAGATTCTTGTAATTATATTTTCAACTATTCTGGGTTCATTCACTTTTAAGTCGAGGAGTTTGATTCTGAGTTTTGGCTAAATTTTCTTCCTTATTAGTATCATATAAACCCATTTCATTGTTATGATTGATTTTTCTAGAGAGATCTTCACCATGCTTTAAACAGATTGTGGCATTCTTGGGGGTGTTGGTGTACAAATTCTACGGGGAGGAACTAAGGGAAATGTTTGGTTACGAAGAACACCCATATGGGTTCTACGCCATGGCTGGTATACTGAGGCTGCCGACTAACTCCTTACTTTTAAGTCTTTCTTATATATGTATTGTATTTTCCCACAGTTTTTTGGTTTCTTTTGATAAGAAGAACCTAGAACTTGCTGTTGGATGAATCCTTGAATGAAATCAAGCACACCGGCTTAAGAAAACGTAGTTGCTCTACTATCCGACTTTTAAATGCTTCGTTCTATAATTTCCTTCTACAGTCCTGGCTATCATCTTGGTTGGATTACTCTATGGATTCTTCATAGCGATTATATGCGGGCAGAGGATAAATGAACGCCACTACCATGTCCTTGCTAAGCAAGAACTGACAAAGGTCCAGTAACGATTTAAGATCAGAATATTGTAAAATTGTCCTCCCCCCGTTAAGAGTTTTATGTCAAAGTTGAGCTTACAGCGGTTAGCATGTATTCCACCTGAGATTGATGGTTCAAATGTCCCATCTCCTATTCTTTGTACTAAAAGAAAAACTTTATATATTTCAGGAGTATATAGTCGAAGATCGAGAACATAACAAAAGTGTTCCTGAACTAGACCCCAGACATGTTATGGAGCTAAGGATGTTAGGCCTGTATTAA

mRNA sequence

NNGGGGGGGGGGAGATCATCCTCTGCTATGGAAATGGGATCTCAGTCTTGGCTTCCCAGCTGAATCACTAGCGCCATTACTTCCATCGATACCTTTGATTCAGTCACTGACTTTTCTCTCACTCTCCTTCCCTTTACAGATGACTTTTGACTGTAGATGGGATTAATCAGAAATGGGTTACTTCTGGATTCTTTGTTTAATTGCCCTCCGCTCTGGAATTGATCACCAACTCTCCTTTACAGAGGGATACCATGGTTTTACATTTTTTTTTCTTTGATTTCAACTGTGGACTCCATCAGTATGAAGAATGTGGTCGACCTTTATTTCATTATTTTTTCTGAATTTTTTCTTTGAGCTATGATTCTATCATCTCCTTACACTCCTAGATTTGAAGTCGTTTGAGGGTTGTCATCATGGAGGATGTTCGATAAGGAGAAGATGTAGTCCTAGAAGTCTGCGTTCAGTGTGGATAACCTTGTGACAGATGAAATTCTGCCTATCTTGATCTAGGAGAATGTATTTGAAGCTGAGTTTTCTTTTAAGTTTTCTTTTGTTCTCGGACATGTTCATGTAGTTAAGCGTCCATTTCGAAGCTCAGTGTATGCTTAAGGTTGCAGAGAAGGAAACTGTAAGCTAGAAACATAAAGCCATGCTTTTTCCATAGGGTGGGTAGCGGGAGAAGCAGTAAGAATTTCATTGACCCCTTGGAGGATGAGATGAGAATGTTGGTTAAGGAGGAGAATGAGATTGAGCCCTTGGAGGATAATGGGTTCTCACGGCCTTCTTTCAGGACAATTGGGTGGGCATAAAAGAGGACTTGATGCGGGTGCTGATGTTCTTTGAATGAGGCATTTTGGATAACTCTCTAAATCAGACTTTTGTTTGAAGAAGTGAGGGCAAACAAGGTTAAGGACTTTAGACCCATCAACTTGGTTGTGAGATTGGCACTTCCCCTTGTCTTATTTAGGTTTCCCTATTGACCATAAACCGATTTTTTTTTTTACAAGAGTATAGATTTACTTTTATCTATTTAGTTTTTATCCGTCTACTTCTTTTCCCTTTTTAGAGCCCCCAATTCTGTTTCTAAGTCTTTAGAGAAGCTTACAAGGTATTTACCATCGGAAGGGGTCAACGAGGGTAGGAGTGTGAATTGGGTAAATTGGGACTTAGGTGGGGAAGCCAGAGTATCTTGAGGGACTCAAGTTAAGAGAATTTAAGAATCCCAAACAAAGTCTTGCGGGCTAAATGACTTTAATTGTAACGACCCACTTTCCACATGGATCACCACATGGACTCGGGTCAAGGAAATTTGACAAGTTTTTGAAGAGAATAACATTAAAATAATATTAAAAGTAACATGGATGGAAGAGACTCAATCTATGGCCCCTCCCGCAGTCGCACGACTCCGTATGCTCCCACCATCGACTGTGGCTTACGCTCCATCTAAAAATATAGAATAATATGAGATGAGTATAAAATACTCATTAGGCAACCAACTTGTAAGCTCTTGTTAGACTCATTCCTATACATGAAAGCTTAGGCTATGTGTTCGTAATTGTCCCTAAAGGTATCCAAACTACAAAACTATGTACTAAACCCTCCGCATAAACCCTCAGCATACCTCCTTTAAGGAGTACCCAATCCCCTTTGGGGTTCATAACCGATGAGTTTTTTTATCTCTCTTAGTTCTATGTTTAACGTATATCTGGTTCCTTTGTCAATCTTGCGCGAATTGCACCTCGAGTCACTATGACTCATGGAAGGGCCCTAGGATCCTAAGTCTAGAGGAGCCCTTTAGTTCTTTCTCCTTTCAAACACGCTTCTATCGCCGACAGTGTTGTCGATGGTGATAGTATGCGGTGGCAGCTGAAAACGTCTTATCTTTATTATTATTATTTTTTTTTAATTTTCTAGCTGTCGTCACTTTCCCTCTTCTTTATTTCAAATACACTGATCATCACATTAACGATTCCCGGTTGAGCCTAAAACCCCCTCATCTGTTCGAGTGGGTGCTTAGTGGGGATAAAGGCACTTAAAAAATCCTTGGAAGGCGTCTACTTTGAGCCCCCTTCCTTTTCTCTTCTGGTCTAGTTCTCCATGGAGGATATATGAACCGTTCCTAATTTGAGGATAGAAATTTGGAGTACTTTCTGCATTGATGAATAAGATTGGCTAATTGGCAAGCTTGGTAGTTCGTTACATCAGCTCCAAAAGAATAAGTTACATTGGAATTCAGAAAATTCTATGAGTTCTTAGTTGCATTAATGAAGAAGATATAGAGGTTGTGGCCACTGGCAAGGCATTTCTACACCCGCCCTTATCTGCCAGAAGAATTGATGAACCGGCAAGGCTTCAACATAAGGGAGCAGGAATTACAACTAAGAGCAACCTTTGTGCTTAGGAAGTACTAGCTAAGCTATACCTATTTCTCACGGGTAGGTTAGGTGCCAGGAGCTTGCTTCTATCCCTAACCAATTACAATAAATAGTTGTGGTTGTGGCACCCTAAGTAACCTCAACCTCAAGCACTAGTATAATGAAGTATCAACATTCACACTACAGGTTTTGCAGTGATAACTTTTATCCGAGGCCAAGTACATTCCTTATTACTAAAATAAAGAATTAAGGTTACATATAAGGTAACCTCCACCTAGATTTGGTATATAAAGAAATTGTCATTGCCAGTTACGAAAGACAATGATATTATCCTACAGTTAACTGTATATCTTTGATCTTCTATGTGGATAATTTCGTGCAAACTTGATTACTCTGATTTCCACAATTATGCAGGTTCGTTAATTTTCATGTAAATGATCAACCTGAGCAGTAGCTCAAGCGATGACTTTACAAGTCTGATTCAAGAGCCACAATCTGTGGAATCGTCATCCCCAAATGAGATTATTGTCATAGGGAGAGAGAGCTCCGTTACGGAAGATGATTTACACAATCTTAACGTTGATGAAACTTGTCACCTGGTGAACGCAGACCTACTGCAATGTCGGATATGCCTTGACACCGGAGGAGAAGATTTAATCGCGCCATGCCACTGCAAAGGCACTCAGAAGTATGTCCATAGATTATGTCTTGATAATTGGAGGTCCACAAAGGAGGGCTTTGCTTTTGCTCATTGTACAGAGTGCAGAGCTATGTTCATGATACGTGCAAATGTCCCTACTGATCGCTGGTGGTTAAGACTGAAGTTTCAGTTTCTCGTTGCTAGAGACCATGCGTTCATTTTCATCATTGTTCAGCTGATTGTGGCATTCTTGGGGGTGTTGGTGTACAAATTCTACGGGGAGGAACTAAGGGAAATGTTTGGTTACGAAGAACACCCATATGGGTTCTACGCCATGGCTGTCCTGGCTATCATCTTGGTTGGATTACTCTATGGATTCTTCATAGCGATTATATGCGGGCAGAGGATAAATGAACGCCACTACCATGTCCTTGCTAAGCAAGAACTGACAAAGGAGTATATAGTCGAAGATCGAGAACATAACAAAAGTGTTCCTGAACTAGACCCCAGACATGTTATGGAGCTAAGGATGTTAGGCCTGTATTAA

Coding sequence (CDS)

ATGATCAACCTGAGCAGTAGCTCAAGCGATGACTTTACAAGTCTGATTCAAGAGCCACAATCTGTGGAATCGTCATCCCCAAATGAGATTATTGTCATAGGGAGAGAGAGCTCCGTTACGGAAGATGATTTACACAATCTTAACGTTGATGAAACTTGTCACCTGGTGAACGCAGACCTACTGCAATGTCGGATATGCCTTGACACCGGAGGAGAAGATTTAATCGCGCCATGCCACTGCAAAGGCACTCAGAAGTATGTCCATAGATTATGTCTTGATAATTGGAGGTCCACAAAGGAGGGCTTTGCTTTTGCTCATTGTACAGAGTGCAGAGCTATGTTCATGATACGTGCAAATGTCCCTACTGATCGCTGGTGGTTAAGACTGAAGTTTCAGTTTCTCGTTGCTAGAGACCATGCGTTCATTTTCATCATTGTTCAGCTGATTGTGGCATTCTTGGGGGTGTTGGTGTACAAATTCTACGGGGAGGAACTAAGGGAAATGTTTGGTTACGAAGAACACCCATATGGGTTCTACGCCATGGCTGTCCTGGCTATCATCTTGGTTGGATTACTCTATGGATTCTTCATAGCGATTATATGCGGGCAGAGGATAAATGAACGCCACTACCATGTCCTTGCTAAGCAAGAACTGACAAAGGAGTATATAGTCGAAGATCGAGAACATAACAAAAGTGTTCCTGAACTAGACCCCAGACATGTTATGGAGCTAAGGATGTTAGGCCTGTATTAA

Protein sequence

MINLSSSSSDDFTSLIQEPQSVESSSPNEIIVIGRESSVTEDDLHNLNVDETCHLVNADLLQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY

Homology

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BLAST of CmaCh01G000020 vs. TrEMBL
Match: A0A0A0LE97_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G640630 PE=4 SV=1)

HSP 1 Score: 431.0 bits (1107), Expect = 9.7e-118
Identity = 214/235 (91.06%), Postives = 221/235 (94.04%), Query Frame = 1


Query: 19  PQSVESSSPNEI---IVIGRESSVTEDDLHNLNVDETCHLVNADLLQCRICLDTGGEDLI 78
           PQSV SSS  EI   I IGRESSV++DDLHN N+DETCHLVN D  QCRICLDTGGEDLI
Sbjct: 28  PQSVGSSSSAEIAEIIAIGRESSVSDDDLHNPNIDETCHLVN-DQPQCRICLDTGGEDLI 87

Query: 79  APCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLV 138
           APCHCKGTQKYVHR CLDNWRSTKEGFAFAHCTECRAMF++RANVP DRWWLRLKFQFLV
Sbjct: 88  APCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCTECRAMFVLRANVPPDRWWLRLKFQFLV 147

Query: 139 ARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGF 198
           ARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGF
Sbjct: 148 ARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGF 207

Query: 199 FIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY 251
           FIAIICGQRINERHYHVLAKQELTKEYIVEDREHNK+VPELDP HVMELR+LGLY
Sbjct: 208 FIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKNVPELDPSHVMELRLLGLY 261

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BLAST of CmaCh01G000020 vs. TrEMBL
Match: A0A061G9T2_THECC (RING/FYVE/PHD zinc finger superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_027833 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 8.8e-111
Identity = 196/231 (84.85%), Postives = 211/231 (91.34%), Query Frame = 1


Query: 20  QSVESSSPNEIIVIGRESSVTEDDLHNLNVDETCHLVNADLLQCRICLDTGGEDLIAPCH 79
           +S E SS  EI  IG +S V +DDL ++NVDETCHLVNAD  QCRICLD GG+DLIAPCH
Sbjct: 28  RSEECSSSCEITAIGGDSVVVDDDLEDINVDETCHLVNADHPQCRICLDIGGDDLIAPCH 87

Query: 80  CKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLVARDH 139
           CKGTQKYVHR CLDNWRSTKEGFAFAHCTECRA+F++RANVP DRWWLRLKFQFLVARDH
Sbjct: 88  CKGTQKYVHRSCLDNWRSTKEGFAFAHCTECRALFILRANVPPDRWWLRLKFQFLVARDH 147

Query: 140 AFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFIAI 199
           AFIF+IVQLIVAFLGVLVYKFYGEELREMFGY+EHPYGFY MAVLAI+LVGLLYGFFIAI
Sbjct: 148 AFIFVIVQLIVAFLGVLVYKFYGEELREMFGYDEHPYGFYTMAVLAIVLVGLLYGFFIAI 207

Query: 200 ICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY 251
           ICGQRINERHYHVLAKQELTKEY+VEDRE NK++ ELDP HV ELRMLGLY
Sbjct: 208 ICGQRINERHYHVLAKQELTKEYVVEDREDNKNILELDPSHVTELRMLGLY 258

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BLAST of CmaCh01G000020 vs. TrEMBL
Match: C6TC27_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_15G001100 PE=2 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 2.8e-109
Identity = 197/232 (84.91%), Postives = 209/232 (90.09%), Query Frame = 1


Query: 19  PQSVESSSPNEIIVIGRESSVTEDDLHNLNVDETCHLVNADLLQCRICLDTGGEDLIAPC 78
           P   ESS   EII I   +S  +DDL N+ VDETCHLVNAD  QCRICLD GGEDLIAPC
Sbjct: 27  PPPGESSFSCEIIPISAAAS-GDDDLQNVRVDETCHLVNADQPQCRICLDIGGEDLIAPC 86

Query: 79  HCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLVARD 138
           HCKGTQKYVHR CLDNWRSTKEGFAF+HCTECRA+F++RANVP DRWWLRLKFQFLVARD
Sbjct: 87  HCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECRAVFILRANVPPDRWWLRLKFQFLVARD 146

Query: 139 HAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFIA 198
           HAFIFIIVQL+VAFLGVLVYKFYG+ELREMFGYEEHPYGFY MAVLAI+LVGLLYGFFIA
Sbjct: 147 HAFIFIIVQLVVAFLGVLVYKFYGDELREMFGYEEHPYGFYTMAVLAIVLVGLLYGFFIA 206

Query: 199 IICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY 251
           IICGQRINERHYHVLAKQELTKEY+VEDREH K+VPELDP HV ELRMLGLY
Sbjct: 207 IICGQRINERHYHVLAKQELTKEYVVEDREHVKNVPELDPSHVTELRMLGLY 257

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BLAST of CmaCh01G000020 vs. TrEMBL
Match: A0A0B2QR97_GLYSO (E3 ubiquitin-protein ligase MARCH1 OS=Glycine soja GN=glysoja_024892 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 2.8e-109
Identity = 197/232 (84.91%), Postives = 209/232 (90.09%), Query Frame = 1


Query: 19  PQSVESSSPNEIIVIGRESSVTEDDLHNLNVDETCHLVNADLLQCRICLDTGGEDLIAPC 78
           P   ESS   EII I   +S  +DDL N+ VDETCHLVNAD  QCRICLD GGEDLIAPC
Sbjct: 27  PPPGESSFSCEIIPISAAAS-GDDDLQNVRVDETCHLVNADQPQCRICLDIGGEDLIAPC 86

Query: 79  HCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLVARD 138
           HCKGTQKYVHR CLDNWRSTKEGFAF+HCTECRA+F++RANVP DRWWLRLKFQFLVARD
Sbjct: 87  HCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECRAVFILRANVPPDRWWLRLKFQFLVARD 146

Query: 139 HAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFIA 198
           HAFIFIIVQL+VAFLGVLVYKFYG+ELREMFGYEEHPYGFY MAVLAI+LVGLLYGFFIA
Sbjct: 147 HAFIFIIVQLVVAFLGVLVYKFYGDELREMFGYEEHPYGFYTMAVLAIVLVGLLYGFFIA 206

Query: 199 IICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY 251
           IICGQRINERHYHVLAKQELTKEY+VEDREH K+VPELDP HV ELRMLGLY
Sbjct: 207 IICGQRINERHYHVLAKQELTKEYVVEDREHVKNVPELDPSHVTELRMLGLY 257

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BLAST of CmaCh01G000020 vs. TrEMBL
Match: A0A0B2RBS3_GLYSO (E3 ubiquitin-protein ligase MARCH8 OS=Glycine soja GN=glysoja_036174 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 1.1e-108
Identity = 195/229 (85.15%), Postives = 208/229 (90.83%), Query Frame = 1


Query: 23  ESSSPNEIIVIGRESSV-TEDDLHNLNVDETCHLVNADLLQCRICLDTGGEDLIAPCHCK 82
           ESS   EII I   ++   +DDL N+ VDETCHLVNAD  QCRICLD GGEDLIAPCHCK
Sbjct: 31  ESSFSCEIIPIPPAAATFNDDDLQNVRVDETCHLVNADQPQCRICLDIGGEDLIAPCHCK 90

Query: 83  GTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLVARDHAF 142
           GTQKYVHR CLDNWRSTKEGFAF+HCTECRA+F++RANVP DRWWLRLKFQFLVARDHAF
Sbjct: 91  GTQKYVHRSCLDNWRSTKEGFAFSHCTECRAVFILRANVPPDRWWLRLKFQFLVARDHAF 150

Query: 143 IFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFIAIIC 202
           IFIIVQL+VAFLGVLVYKFYG+ELREMFGYEEHPYGFY MAVLAI+LVGLLYGFFIAIIC
Sbjct: 151 IFIIVQLVVAFLGVLVYKFYGDELREMFGYEEHPYGFYTMAVLAIVLVGLLYGFFIAIIC 210

Query: 203 GQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY 251
           GQRINERHYHVLAKQELTKEY+VEDREH K+VPELDP HV ELRMLGLY
Sbjct: 211 GQRINERHYHVLAKQELTKEYVVEDREHVKNVPELDPSHVTELRMLGLY 259

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BLAST of CmaCh01G000020 vs. TAIR10
Match: AT1G50440.1 (AT1G50440.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 360.1 bits (923), Expect = 1.1e-99
Identity = 182/246 (73.98%), Postives = 204/246 (82.93%), Query Frame = 1


Query: 9   SDDFTSLIQEPQSVESSSPNEIIVIGRESSVTED----DLHNLNVDETCHLVNADLLQCR 68
           SDD     ++    ES+S NEI+   R   V E+    ++   + DET  LV+ D  QCR
Sbjct: 6   SDDDDDRKEQILFDESTSSNEIVAAERGDRVVEEGQVSEIAETDDDETTLLVSGDQPQCR 65

Query: 69  ICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDR 128
           ICLD GGEDLIAPC+CKGTQK+VHR CLDNWRSTKEGFAF+HCTECRA F +RANVP DR
Sbjct: 66  ICLDVGGEDLIAPCNCKGTQKHVHRSCLDNWRSTKEGFAFSHCTECRAFFKLRANVPADR 125

Query: 129 WWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVL 188
           WWLRL+FQ LVARDHAFIFI VQ+IVAFLG+LVYKFYGEELREMFGYEEHPYGFY +AVL
Sbjct: 126 WWLRLRFQLLVARDHAFIFISVQMIVAFLGLLVYKFYGEELREMFGYEEHPYGFYTLAVL 185

Query: 189 AIILVGLLYGFFIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMEL 248
           AI+LVGLLYGFFIAIICGQ+INERHYHVLAKQELTKEYIVEDR+  K+VPELD  HVMEL
Sbjct: 186 AIVLVGLLYGFFIAIICGQKINERHYHVLAKQELTKEYIVEDRD-CKNVPELDQSHVMEL 245

Query: 249 RMLGLY 251
           +MLGLY
Sbjct: 246 KMLGLY 250

[Close]

BLAST of CmaCh01G000020 vs. TAIR10
Match: AT2G22120.2 (AT2G22120.2 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 136.7 bits (343), Expect = 1.9e-32
Identity = 68/135 (50.37%), Postives = 89/135 (65.93%), Query Frame = 1


Query: 61  LQCRICLDTGGEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANV 120
           +QCRICL+T G D IAPC CKGT KYVHR CLD+WR+ KEGFAFAHCT C+A + +R + 
Sbjct: 33  IQCRICLETDGRDFIAPCKCKGTSKYVHRDCLDHWRAIKEGFAFAHCTTCKAPYYLRVHS 92

Query: 121 PTDRWWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVY---KFYGEELREMFGYEEHPYG 180
             DR W  LKF+F V RD   IF+ VQL++A L  +VY    +    LR ++G++     
Sbjct: 93  AGDRKWRTLKFRFFVTRDILSIFLAVQLVIAALAYMVYFIDSYQQSWLRHIWGFDSEVTF 152

Query: 181 FYAM-AVLAIILVGL 192
           +Y   A+L   L+GL
Sbjct: 153 YYMCGALLFFALLGL 167

[Close]

BLAST of CmaCh01G000020 vs. TAIR10
Match: AT1G11020.1 (AT1G11020.1 RING/FYVE/PHD zinc finger superfamily protein)

HSP 1 Score: 109.8 bits (273), Expect = 2.5e-24
Identity = 76/216 (35.19%), Postives = 107/216 (49.54%), Query Frame = 1


Query: 6   SSSSDDFTSLIQEPQSVESSSPNEIIVIGRESSV--TEDDLHNLNVDETCHLVNADLLQC 65
           S    D   L+ +  +  S+SP+   V+   S     E+DL N      C         C
Sbjct: 13  SQKLSDSAPLLGDHTNSSSASPSAASVVAGNSDEIKAEEDLENDASSAPC---------C 72

Query: 66  RICLDTG----GEDLIAPCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRAN 125
           RICL+      G++LI+PC CKGTQ++VHR CLD+WRS KEGFAF+HCT C+A F +R  
Sbjct: 73  RICLEDDSELLGDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLRVE 132

Query: 126 VPTDR--WWLRLKFQFLVARDHAFIFIIVQLIVAFLGVLVYKFYGE-ELREMFG------ 185
              D   W  + KF+  VARD   +F+ VQ ++A +    Y    + E R  F       
Sbjct: 133 PFEDNNSWRRKAKFRLFVARDVLLVFLAVQTVIAVMAGFAYMMDKDGEFRNSFNDDWDRI 192

Query: 186 YEEHPYGFYAMAVLAIILVGLLYGFFIAIICGQRIN 207
             +HP  FY    + +I   +L GF   I+    +N
Sbjct: 193 LSKHPIPFY--YCIGVISFFVLTGFLGIILHCSALN 217

[Close]

BLAST of CmaCh01G000020 vs. NCBI nr
Match: gi|659130284|ref|XP_008465088.1| (PREDICTED: uncharacterized protein LOC103502787 isoform X1 [Cucumis melo])

HSP 1 Score: 434.9 bits (1117), Expect = 9.7e-119
Identity = 216/235 (91.91%), Postives = 222/235 (94.47%), Query Frame = 1


Query: 19  PQSVESSSPNEI---IVIGRESSVTEDDLHNLNVDETCHLVNADLLQCRICLDTGGEDLI 78
           PQSV SSS  EI   I IGRESSV++DDLHNLN+DETCHLVN D  QCRICLDTGGEDLI
Sbjct: 28  PQSVGSSSSAEIAEIIAIGRESSVSDDDLHNLNIDETCHLVN-DQPQCRICLDTGGEDLI 87

Query: 79  APCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLV 138
           APCHCKGTQKYVHR CLDNWRSTKEGFAFAHCTECRAMF++RANVP DRWWLRLKFQFLV
Sbjct: 88  APCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCTECRAMFVLRANVPPDRWWLRLKFQFLV 147

Query: 139 ARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGF 198
           ARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGF
Sbjct: 148 ARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGF 207

Query: 199 FIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY 251
           FIAIICGQRINERHYHVLAKQELTKEYIVEDREHNK+VPELDP HVMELRMLGLY
Sbjct: 208 FIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKNVPELDPSHVMELRMLGLY 261

[Close]

BLAST of CmaCh01G000020 vs. NCBI nr
Match: gi|778682365|ref|XP_011651697.1| (PREDICTED: E3 ubiquitin-protein ligase MARCH8 isoform X1 [Cucumis sativus])

HSP 1 Score: 431.0 bits (1107), Expect = 1.4e-117
Identity = 214/235 (91.06%), Postives = 221/235 (94.04%), Query Frame = 1


Query: 19  PQSVESSSPNEI---IVIGRESSVTEDDLHNLNVDETCHLVNADLLQCRICLDTGGEDLI 78
           PQSV SSS  EI   I IGRESSV++DDLHN N+DETCHLVN D  QCRICLDTGGEDLI
Sbjct: 28  PQSVGSSSSAEIAEIIAIGRESSVSDDDLHNPNIDETCHLVN-DQPQCRICLDTGGEDLI 87

Query: 79  APCHCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLV 138
           APCHCKGTQKYVHR CLDNWRSTKEGFAFAHCTECRAMF++RANVP DRWWLRLKFQFLV
Sbjct: 88  APCHCKGTQKYVHRSCLDNWRSTKEGFAFAHCTECRAMFVLRANVPPDRWWLRLKFQFLV 147

Query: 139 ARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGF 198
           ARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGF
Sbjct: 148 ARDHAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGF 207

Query: 199 FIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY 251
           FIAIICGQRINERHYHVLAKQELTKEYIVEDREHNK+VPELDP HVMELR+LGLY
Sbjct: 208 FIAIICGQRINERHYHVLAKQELTKEYIVEDREHNKNVPELDPSHVMELRLLGLY 261

[Close]

BLAST of CmaCh01G000020 vs. NCBI nr
Match: gi|590617171|ref|XP_007023714.1| (RING/FYVE/PHD zinc finger superfamily protein isoform 2 [Theobroma cacao])

HSP 1 Score: 407.9 bits (1047), Expect = 1.3e-110
Identity = 196/231 (84.85%), Postives = 211/231 (91.34%), Query Frame = 1


Query: 20  QSVESSSPNEIIVIGRESSVTEDDLHNLNVDETCHLVNADLLQCRICLDTGGEDLIAPCH 79
           +S E SS  EI  IG +S V +DDL ++NVDETCHLVNAD  QCRICLD GG+DLIAPCH
Sbjct: 28  RSEECSSSCEITAIGGDSVVVDDDLEDINVDETCHLVNADHPQCRICLDIGGDDLIAPCH 87

Query: 80  CKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLVARDH 139
           CKGTQKYVHR CLDNWRSTKEGFAFAHCTECRA+F++RANVP DRWWLRLKFQFLVARDH
Sbjct: 88  CKGTQKYVHRSCLDNWRSTKEGFAFAHCTECRALFILRANVPPDRWWLRLKFQFLVARDH 147

Query: 140 AFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFIAI 199
           AFIF+IVQLIVAFLGVLVYKFYGEELREMFGY+EHPYGFY MAVLAI+LVGLLYGFFIAI
Sbjct: 148 AFIFVIVQLIVAFLGVLVYKFYGEELREMFGYDEHPYGFYTMAVLAIVLVGLLYGFFIAI 207

Query: 200 ICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY 251
           ICGQRINERHYHVLAKQELTKEY+VEDRE NK++ ELDP HV ELRMLGLY
Sbjct: 208 ICGQRINERHYHVLAKQELTKEYVVEDREDNKNILELDPSHVTELRMLGLY 258

[Close]

BLAST of CmaCh01G000020 vs. NCBI nr
Match: gi|358248317|ref|NP_001240116.1| (uncharacterized protein LOC100789593 [Glycine max])

HSP 1 Score: 402.9 bits (1034), Expect = 4.1e-109
Identity = 197/232 (84.91%), Postives = 209/232 (90.09%), Query Frame = 1


Query: 19  PQSVESSSPNEIIVIGRESSVTEDDLHNLNVDETCHLVNADLLQCRICLDTGGEDLIAPC 78
           P   ESS   EII I   +S  +DDL N+ VDETCHLVNAD  QCRICLD GGEDLIAPC
Sbjct: 27  PPPGESSFSCEIIPISAAAS-GDDDLQNVRVDETCHLVNADQPQCRICLDIGGEDLIAPC 86

Query: 79  HCKGTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLVARD 138
           HCKGTQKYVHR CLDNWRSTKEGFAF+HCTECRA+F++RANVP DRWWLRLKFQFLVARD
Sbjct: 87  HCKGTQKYVHRSCLDNWRSTKEGFAFSHCTECRAVFILRANVPPDRWWLRLKFQFLVARD 146

Query: 139 HAFIFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFIA 198
           HAFIFIIVQL+VAFLGVLVYKFYG+ELREMFGYEEHPYGFY MAVLAI+LVGLLYGFFIA
Sbjct: 147 HAFIFIIVQLVVAFLGVLVYKFYGDELREMFGYEEHPYGFYTMAVLAIVLVGLLYGFFIA 206

Query: 199 IICGQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY 251
           IICGQRINERHYHVLAKQELTKEY+VEDREH K+VPELDP HV ELRMLGLY
Sbjct: 207 IICGQRINERHYHVLAKQELTKEYVVEDREHVKNVPELDPSHVTELRMLGLY 257

[Close]

BLAST of CmaCh01G000020 vs. NCBI nr
Match: gi|571495960|ref|XP_006593459.1| (PREDICTED: uncharacterized protein LOC100808123 isoform X2 [Glycine max])

HSP 1 Score: 401.0 bits (1029), Expect = 1.5e-108
Identity = 195/229 (85.15%), Postives = 208/229 (90.83%), Query Frame = 1


Query: 23  ESSSPNEIIVIGRESSV-TEDDLHNLNVDETCHLVNADLLQCRICLDTGGEDLIAPCHCK 82
           ESS   EII I   ++   +DDL N+ VDETCHLVNAD  QCRICLD GGEDLIAPCHCK
Sbjct: 31  ESSFSCEIIPIPPAAATFNDDDLQNVRVDETCHLVNADQPQCRICLDIGGEDLIAPCHCK 90

Query: 83  GTQKYVHRLCLDNWRSTKEGFAFAHCTECRAMFMIRANVPTDRWWLRLKFQFLVARDHAF 142
           GTQKYVHR CLDNWRSTKEGFAF+HCTECRA+F++RANVP DRWWLRLKFQFLVARDHAF
Sbjct: 91  GTQKYVHRSCLDNWRSTKEGFAFSHCTECRAVFILRANVPPDRWWLRLKFQFLVARDHAF 150

Query: 143 IFIIVQLIVAFLGVLVYKFYGEELREMFGYEEHPYGFYAMAVLAIILVGLLYGFFIAIIC 202
           IFIIVQL+VAFLGVLVYKFYG+ELREMFGYEEHPYGFY MAVLAI+LVGLLYGFFIAIIC
Sbjct: 151 IFIIVQLVVAFLGVLVYKFYGDELREMFGYEEHPYGFYTMAVLAIVLVGLLYGFFIAIIC 210

Query: 203 GQRINERHYHVLAKQELTKEYIVEDREHNKSVPELDPRHVMELRMLGLY 251
           GQRINERHYHVLAKQELTKEY+VEDREH K+VPELDP HV ELRMLGLY
Sbjct: 211 GQRINERHYHVLAKQELTKEYVVEDREHVKNVPELDPSHVTELRMLGLY 259

The following BLAST results are available for this feature:

BLAST of CmaCh01G000020 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh01G000020 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LE97_CUCSA	9.7e-118	91.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G640630 PE=4 SV=1	[more]
A0A061G9T2_THECC	8.8e-111	84.85	RING/FYVE/PHD zinc finger superfamily protein isoform 2 OS=Theobroma cacao GN=TC...	[more]
C6TC27_SOYBN	2.8e-109	84.91	Uncharacterized protein OS=Glycine max GN=GLYMA_15G001100 PE=2 SV=1	[more]
A0A0B2QR97_GLYSO	2.8e-109	84.91	E3 ubiquitin-protein ligase MARCH1 OS=Glycine soja GN=glysoja_024892 PE=4 SV=1	[more]
A0A0B2RBS3_GLYSO	1.1e-108	85.15	E3 ubiquitin-protein ligase MARCH8 OS=Glycine soja GN=glysoja_036174 PE=4 SV=1	[more]

BLAST of CmaCh01G000020 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G50440.1	1.1e-99	73.98	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G22120.2	1.9e-32	50.37	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G11020.1	2.5e-24	35.19	RING/FYVE/PHD zinc finger superfamily protein	[more]

BLAST of CmaCh01G000020 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659130284\|ref\|XP_008465088.1\|	9.7e-119	91.91	PREDICTED: uncharacterized protein LOC103502787 isoform X1 [Cucumis melo]	[more]
gi\|778682365\|ref\|XP_011651697.1\|	1.4e-117	91.06	PREDICTED: E3 ubiquitin-protein ligase MARCH8 isoform X1 [Cucumis sativus]	[more]
gi\|590617171\|ref\|XP_007023714.1\|	1.3e-110	84.85	RING/FYVE/PHD zinc finger superfamily protein isoform 2 [Theobroma cacao]	[more]
gi\|358248317\|ref\|NP_001240116.1\|	4.1e-109	84.91	uncharacterized protein LOC100789593 [Glycine max]	[more]
gi\|571495960\|ref\|XP_006593459.1\|	1.5e-108	85.15	PREDICTED: uncharacterized protein LOC100808123 isoform X2 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011016	Znf_RING-CH
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G000020.1	CmaCh01G000020.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 63..110 score: 7.4
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 62..111 score: 2.7
IPR011016	Zinc finger, RING-CH-type	PROFILE	PS51292	ZF_RING_CH	coord: 55..117 score: 18
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 61..115 score: 8.4
None	No IPR available	PANTHER	PTHR23012:SF65	SUBFAMILY NOT NAMED	coord: 8..247 score: 5.9E
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 59..114 score: 3.36

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh01G000020	Cucsa.149680	Cucumber (Gy14) v1	cgycmaB0412
CmaCh01G000020	Csa3G640630	Cucumber (Chinese Long) v2	cmacuB447
CmaCh01G000020	ClCG07G014630	Watermelon (Charleston Gray)	cmawcgB428
CmaCh01G000020	CSPI03G28150	Wild cucumber (PI 183967)	cmacpiB450
CmaCh01G000020	CmoCh01G000020	Cucurbita moschata (Rifu)	cmacmoB468
CmaCh01G000020	CmoCh14G012120	Cucurbita moschata (Rifu)	cmacmoB461
CmaCh01G000020	Lsi07G006750	Bottle gourd (USVL1VR-Ls)	cmalsiB450
CmaCh01G000020	Cp4.1LG02g17630	Cucurbita pepo (Zucchini)	cmacpeB491
CmaCh01G000020	Cp4.1LG03g15080	Cucurbita pepo (Zucchini)	cmacpeB493
CmaCh01G000020	CsaV3_3G030540	Cucumber (Chinese Long) v3	cmacucB0539
CmaCh01G000020	Cla97C07G141560	Watermelon (97103) v2	cmawmbB496
CmaCh01G000020	Bhi01G002249	Wax gourd	cmawgoB0561
CmaCh01G000020	CsGy3G026170	Cucumber (Gy14) v2	cgybcmaB362
CmaCh01G000020	Carg04356	Silver-seed gourd	carcmaB0278

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh01G000020	CmaCh14G011880	Cucurbita maxima (Rimu)	cmacmaB254

The following block(s) are covering this gene:

None