Cp4.1LG02g05020 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG02g05020
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionRhomboid-like protein
LocationCp4.1LG02 : 2100877 .. 2104341 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGAGCTGCTCTGAAATCCCCGACTGAACGATGCAATCGCGGTTGCAGCAGCTCCATGGGAGCCGAATATTGAAACCTCGTGGACTACGCGAGCAAATGGCTACGACTTCCATTGCTCATCTCTCAAGCTTCAGCTCAAGCTCACTCAGATTCTCCTCTCCATTATTTCACCCGCTCTCATCGTCTCTTTCCGTTGCTCAATTTAGCAATGTTCTTCGTCTTCGCGCTCGTTCCACTGCTGCGAAACCTATCGCGATGTGCAAAATGAACGATGCAGGTTGTTCTTTTTCTTTTTTTGTTCTTCTGCGTTATTTTCAACAATTTATCTGTTTATTCATGATTTTATTGTGGAATTTTTGCTGAATTAGAAGGGGATTTTGTGATTTTTATTGATGAATATGCGTGCGGTTGAATGAAAGTAAAGAAGAATTTTGTTTTTAAATGTTTGTTAGATTTGATATCACAGTTGGAGCTGGGGAAACCACTGCAGAATCGGAAACCGGAGAAGCGTGTTAATGGTATATTCTGGATCATTCTTCTCAACATTGGAGTATATGTGGCCGATCACATTTTTCAGGTACGAGTTCTGTTACCACATGCTATCAAGTCTAATGCTATTTGCCTATAGAGATTGAGAAAGAAAGAGCCCCAAAATATTGCCCGAAACTTGAGGAATACTGAATGAACTATTTGTCAAAGCTGATTGTTATAGGGCATTGATAGGTTAATCCACTCGTAAGCAGATTATTAACAGTAAACCGTTTTATTAGGGAATATGAAAAGATACATTCTAAAAGTATTAGATTCATAGCAGTCAACTTAGCTAGTTAAAAACTTGATTCTCGAGTTGAAGCAACTCAAAAGCTTAAGTTGATGGGTGATGGTAACTTTAATTATATCAACATTTTAACATTCTCCTTGTTTATGGGCTTGAAAGTTTGTAATATGCTCAACTAGTAGAAATCAATATTACTTGGGGAGTAGAGAATGGTAGGGCTTTTTTCTTTTCTTTTTTTTTTAATTTTGTGATAAGGAATCAACCGTGAGGAAAGCTCTATACCAAATGATAAGGAATCAACCCAAACCCAAGAGAAAGCTCTAATACAAAATGCTAAGGAATCACGGTAAGAGAAGTAAGATTCGGATTACCTTGTTGATCAAATATATTAAGGCAAGAACACTTGTTTGAGATTTGAATCACTCCAGGAGTAAAATTGATCATGTCAAACTTGAATGATTCTACATGCAACCTAAACTATATAGAATTGCAAAGAAACTTAGCATTTGGCAAAAGGAAAGCACAAATACTCTTTTTACTACATTTTTCAAGTCTTCTCTGCAAAGATAACATATATGGCTTTATATAGCCTCAAAATGAAAACTCTTAACCTTCTATGAGGTATTCCTAGAGTTGTAATTTTCATACTTTATGACCATAATTAATCACTATGTAAATAGGTCTTAAAATACATTAAAGAAACACATAACTCTAAATTATCATCCACCCAAAATTTGTAACCATCCAAGAATAAATAAATGGAGCTTGATTCTTCTTTAATGTGGCATGAATTGCAACATCTTGGGATAATTTGAACAACATTTTCTTCACATCTTCCTTCAAAATTTATCTTGTATGATTGATGCCTTGGTTCATATCACTTTGTTACTCAAACACCGAGATGCTTGTACTCAATTACTAAATTCTCTTTTTCATAGGTTCGTAGTATAGGAGCTCTGTACTTGTACCACAATCGTCCTGCATGGTATCAATTTTTTACAGCAACATTTTGTCATGCTAATTGGTGAGTTTTTGGGCTCTTCAAAATCATGCAAATTTTACATTTCTCGTCTACCTTGAATGGATCGATGGAGTTAGAAGCTTGTTATCTTCTCATGAGAATGCAATTTTCTGGTTTTACAAGCATGACTTAGTGGAATACTTACTATTTCCATGAATGTTTTGCAGGAACCATCTCTCTAGCAATCTTTTTTTCTTGTATATATTTGGTGAGACCCACACTTGACTTCCCTCCCCTCCCCTCCCCTCCAAGAAAATGAATGTTCTAATGTATGGATTTCTACTTTATTTCTTGGAGGTGGAAGCCATAAAATAGCCCTAATGTTTTGACATTTAATAGTTCCATTATTTTTTATGAACAGGAAAACTTGTTGAGGAAGAGGAAGGAAACTTTGCTTTGTGGCTTTCCTATATTCTTACTGGTGTAGGTGCAAACATTGTTTCATGGCTAATTTTACCAAGAAATGCTGTATCAGTTGGAGCTTCTGGTGCTGTTTTTGGGTTGTTTACTATAAGTGTCCTTGTAAAGGTATCTATCTAAAACTTATGATTTATCACTCTCATTTCGATTTTGGTGCATTTTAACTAAGATATTTCTTCGTGGCAGATGTCTTGGGACTGGAGGAAGATCCTCGAAGTCCTTATACTTGGTCAATTTGTTATAGAGAAGGTAGTGCATTCTCTTTTTACTCCCATGTGAATGATCTTAAACACTCAGACAAGCAACTTCTCTAAATAGTTGCTAAATGGGAATGCATGTAACAGTCCAAACTCACCGCCGCTAGCCGATATTGTCCTATTTGAACTTTCCCTTTCAAGCTTTCCCTAAAGGTTTTTAAAATGCATCTGCTAGGGAGAGGTTTTCACACCCTTATAAAAAATGTTTTGTTCTCCTCCCCAACCGATGTGGGATCTCACAATGCATGACTACACTATGCAAGTCATTGTTTAAGATGTTCATTATTCTTTTGCTCTATCTTTTATCTAATGGATCCGACAAGTAAAAATATAGATATTGTAAATCTAAGTACAGTTAAATTAGTTAAGGTTTATATTCTCAAAAGAGATCATAATCCTCTAACTTCCACATGTTGTTGAACTAAAAATGTGGAACTAAAACAAAGTAACGGAGTAGTTGAAATAGAATTAAACTCTCTCTTTTCATTTATTTCTAAAAGCATAAATCTTGTGGTTGGTTTCTGTAAAACATAAGGTGAGGGAACTTTCTTATCCATATGCTTTGCTTGGTCACTATAGGTCATGGAAGCAGCCCAAGCTTCAACTGCACTGTCAGGAAGCTTCCGCGGAGGATCTGCCTTGCAGAATGTTAACCATGTTGCTCATCTCTCTGGGGCGCTCGTCGGTGTCGTTCTGGTATGGCTTCTCAGTAGAATTCCTTCTCAACCTCCTGATCAAGATGCATCAACTTTGCACAGGAAAGTAAGATGATTGCACAAGCAATTCTGCTTTGAAATAGAACAATATACTCTGCCCTTATCTTCTTGTTTTGTTCTCATTTAGGAAACAGTATCCATTCATCTTCCTATTTGTATCTTGTGTAAAATATTTTATATAGGATTGTGGCTATAGGTTTGCAAGTGTAAAAGTAATATTGGCATGGATGGAACGAATTTTCTTGACAACTAAATGTAATAGCAAGACGATTT

mRNA sequence

CGGAGCTGCTCTGAAATCCCCGACTGAACGATGCAATCGCGGTTGCAGCAGCTCCATGGGAGCCGAATATTGAAACCTCGTGGACTACGCGAGCAAATGGCTACGACTTCCATTGCTCATCTCTCAAGCTTCAGCTCAAGCTCACTCAGATTCTCCTCTCCATTATTTCACCCGCTCTCATCGTCTCTTTCCGTTGCTCAATTTAGCAATGTTCTTCGTCTTCGCGCTCGTTCCACTGCTGCGAAACCTATCGCGATGTGCAAAATGAACGATGCAGATTTGATATCACAGTTGGAGCTGGGGAAACCACTGCAGAATCGGAAACCGGAGAAGCGTGTTAATGGTATATTCTGGATCATTCTTCTCAACATTGGAGTATATGTGGCCGATCACATTTTTCAGGTTCGTAGTATAGGAGCTCTGTACTTGTACCACAATCGTCCTGCATGGTATCAATTTTTTACAGCAACATTTTGTCATGCTAATTGGAACCATCTCTCTAGCAATCTTTTTTTCTTGTATATATTTGGAAAACTTGTTGAGGAAGAGGAAGGAAACTTTGCTTTGTGGCTTTCCTATATTCTTACTGGTGTAGGTGCAAACATTGTTTCATGGCTAATTTTACCAAGAAATGCTGTATCAGTTGGAGCTTCTGGTGCTGTTTTTGGGTTGTTTACTATAAGTGTCCTTGTAAAGATGTCTTGGGACTGGAGGAAGATCCTCGAAGTCCTTATACTTGGTCAATTTGTTATAGAGAAGGTCATGGAAGCAGCCCAAGCTTCAACTGCACTGTCAGGAAGCTTCCGCGGAGGATCTGCCTTGCAGAATGTTAACCATGTTGCTCATCTCTCTGGGGCGCTCGTCGGTGTCGTTCTGGTATGGCTTCTCAGTAGAATTCCTTCTCAACCTCCTGATCAAGATGCATCAACTTTGCACAGGAAAGTAAGATGATTGCACAAGCAATTCTGCTTTGAAATAGAACAATATACTCTGCCCTTATCTTCTTGTTTTGTTCTCATTTAGGAAACAGTATCCATTCATCTTCCTATTTGTATCTTGTGTAAAATATTTTATATAGGATTGTGGCTATAGGTTTGCAAGTGTAAAAGTAATATTGGCATGGATGGAACGAATTTTCTTGACAACTAAATGTAATAGCAAGACGATTT

Coding sequence (CDS)

ATGCAATCGCGGTTGCAGCAGCTCCATGGGAGCCGAATATTGAAACCTCGTGGACTACGCGAGCAAATGGCTACGACTTCCATTGCTCATCTCTCAAGCTTCAGCTCAAGCTCACTCAGATTCTCCTCTCCATTATTTCACCCGCTCTCATCGTCTCTTTCCGTTGCTCAATTTAGCAATGTTCTTCGTCTTCGCGCTCGTTCCACTGCTGCGAAACCTATCGCGATGTGCAAAATGAACGATGCAGATTTGATATCACAGTTGGAGCTGGGGAAACCACTGCAGAATCGGAAACCGGAGAAGCGTGTTAATGGTATATTCTGGATCATTCTTCTCAACATTGGAGTATATGTGGCCGATCACATTTTTCAGGTTCGTAGTATAGGAGCTCTGTACTTGTACCACAATCGTCCTGCATGGTATCAATTTTTTACAGCAACATTTTGTCATGCTAATTGGAACCATCTCTCTAGCAATCTTTTTTTCTTGTATATATTTGGAAAACTTGTTGAGGAAGAGGAAGGAAACTTTGCTTTGTGGCTTTCCTATATTCTTACTGGTGTAGGTGCAAACATTGTTTCATGGCTAATTTTACCAAGAAATGCTGTATCAGTTGGAGCTTCTGGTGCTGTTTTTGGGTTGTTTACTATAAGTGTCCTTGTAAAGATGTCTTGGGACTGGAGGAAGATCCTCGAAGTCCTTATACTTGGTCAATTTGTTATAGAGAAGGTCATGGAAGCAGCCCAAGCTTCAACTGCACTGTCAGGAAGCTTCCGCGGAGGATCTGCCTTGCAGAATGTTAACCATGTTGCTCATCTCTCTGGGGCGCTCGTCGGTGTCGTTCTGGTATGGCTTCTCAGTAGAATTCCTTCTCAACCTCCTGATCAAGATGCATCAACTTTGCACAGGAAAGTAAGATGA

Protein sequence

MQSRLQQLHGSRILKPRGLREQMATTSIAHLSSFSSSSLRFSSPLFHPLSSSLSVAQFSNVLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQVRSIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDASTLHRKVR
Homology
[Close]
BLAST of Cp4.1LG02g05020 vs. Swiss-Prot
Match: RBL11_ARATH (Rhomboid-like protein 11, chloroplastic OS=Arabidopsis thaliana GN=RBL11 PE=1 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 8.5e-101
Identity = 190/275 (69.09%), Postives = 213/275 (77.45%), Query Frame = 1 

Query: 30  HLSSFSSSSLRFSSPLFH-------PLSSSLSVAQFSNVLRLRARSTAAKPIAMCKMNDA 89
           H  S   SSLRF  P  H       P +S+    QF  +   R++ T       C+ + +
Sbjct: 8   HRLSLPQSSLRFRFPPLHRRRAASSPTNSTQPPLQFRPLTVSRSQIT-------CRFSQS 67

Query: 90  DLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQVRSIGALYLYHNRPAWYQ 149
           D+  Q EL K   NRKP+KR NGIFWIIL+N+G+Y+ADH FQVR I +LYLYHN PAWYQ
Sbjct: 68  DITPQFELDKAKDNRKPQKRANGIFWIILINLGIYLADHFFQVRGIKSLYLYHNFPAWYQ 127

Query: 150 FFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNA 209
           F TATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF LWLSY+ TGVGAN+VSWL+LPRNA
Sbjct: 128 FVTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYLFTGVGANLVSWLVLPRNA 187

Query: 210 VSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGS 269
           VSVGASGAVFGLF ISVLVKMSWDWRKILEVLILGQFVIE+VMEAAQAS  LSG+  GG 
Sbjct: 188 VSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVIERVMEAAQASAGLSGTIYGGY 247

Query: 270 ALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQD 298
           +LQ VNH+AHLSGALVGVVLVWLLS+ PS   DQD
Sbjct: 248 SLQTVNHIAHLSGALVGVVLVWLLSKFPSASMDQD 275

[Close]
BLAST of Cp4.1LG02g05020 vs. Swiss-Prot
Match: RBL3_ARATH (RHOMBOID-like protein 3 OS=Arabidopsis thaliana GN=RBL3 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.2e-06
Identity = 48/154 (31.17%), Postives = 83/154 (53.90%), Query Frame = 1 

Query: 141 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPR 200
           ++  T  + HA   HL +N+  L   G  +E++ G   + + Y+L+G+G +++S L + R
Sbjct: 135 WRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFI-R 194

Query: 201 NAVSVGASGAVFGLFTISVLVKMSWDW----RKILEVLILGQFVIEKVMEAAQASTALSG 260
           N++SVGASGA+FGL   S+L ++  +W     KI  +L L  FVI         + A+  
Sbjct: 195 NSISVGASGALFGLLG-SMLSELFTNWTIYSNKIAALLTL-LFVI-------LINLAI-- 254

Query: 261 SFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIP 291
                  L +V++ AH+ G + G +L ++L   P
Sbjct: 255 -----GILPHVDNFAHVGGFVTGFLLGFILLARP 271

[Close]
BLAST of Cp4.1LG02g05020 vs. Swiss-Prot
Match: RBL6_ARATH (RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana GN=RBL6 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.1e-06
Identity = 48/153 (31.37%), Postives = 80/153 (52.29%), Query Frame = 1 

Query: 141 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPR 200
           ++  TA + HA   HL  N+F + IFG  +E++ G   + L Y+++G G +I+S L L +
Sbjct: 98  WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFLQK 157

Query: 201 NAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQASTALSGS 260
            ++SVGASGA+ GL   ++L ++  +W   +  L  L+   F+I     A   +  L   
Sbjct: 158 -SISVGASGALLGLMG-AMLSELLTNWTIYKSKLCALLSFLFII-----AINLAIGL--- 217

Query: 261 FRGGSALQNVNHVAHLSGALVGVVLVWLLSRIP 291
                 L  V++ AH+ G L G  L ++L   P
Sbjct: 218 ------LPWVDNFAHIGGLLTGFCLGFILLMQP 234

[Close]
BLAST of Cp4.1LG02g05020 vs. TrEMBL
Match: A0A0A0LEK4_CUCSA (Rhomboid-like protein OS=Cucumis sativus GN=Csa_3G889110 PE=3 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 1.7e-132
Identity = 257/309 (83.17%), Postives = 271/309 (87.70%), Query Frame = 1 

Query: 1   MQSRLQQ--LHGSRILKPRGL-REQMATTSIAHLSSFSSSSLRFSSPLFHPLSSSLSVAQ 60
           MQ +LQQ  LHG RI KP  L   QM  TSI+  SSF+ +SLRFSSP  H      S+ Q
Sbjct: 1   MQLQLQQQLLHGGRISKPPTLCNNQMPLTSISFQSSFTLTSLRFSSPFLH------SLPQ 60

Query: 61  FSNVLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVY 120
           F++VL L +R    KPIA CKMNDADLISQLELGKPLQNRK EKRVNGIFWIILLNIG+Y
Sbjct: 61  FTHVLPLHSRFFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIY 120

Query: 121 VADHIFQVRSIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180
           VADH+FQVR+IGALYLYH+RPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF
Sbjct: 121 VADHVFQVRNIGALYLYHSRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180

Query: 181 ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240
           ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG
Sbjct: 181 ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240

Query: 241 QFVIEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQD 300
           QFVIEKVMEAAQASTALSGSFRG S LQNVNHVAHLSGALVGV+LVWLLSR+PSQ  DQD
Sbjct: 241 QFVIEKVMEAAQASTALSGSFRGYS-LQNVNHVAHLSGALVGVLLVWLLSRVPSQSSDQD 300

Query: 301 ASTLHRKVR 307
           AS LHRK R
Sbjct: 301 ASALHRKGR 302

[Close]
BLAST of Cp4.1LG02g05020 vs. TrEMBL
Match: W9SRK1_9ROSA (Rhomboid-like protein OS=Morus notabilis GN=L484_001802 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 3.3e-107
Identity = 189/243 (77.78%), Postives = 214/243 (88.07%), Query Frame = 1 

Query: 62  LRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADH 121
           L  R    AA+P  +CKM+D+D++SQLELGKP + RKP K+V GIFWIILLN+G+Y ADH
Sbjct: 66  LPFRPLFAAARPRTLCKMSDSDIMSQLELGKPEERRKPHKQVTGIFWIILLNLGIYAADH 125

Query: 122 IFQVRSIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWL 181
           +FQVR+I  LYLYH  P WYQF TATFCHA+W HLSSNLFFLYIFGKLVEEEEGNF LWL
Sbjct: 126 VFQVRAIKDLYLYHGYPEWYQFLTATFCHADWRHLSSNLFFLYIFGKLVEEEEGNFGLWL 185

Query: 182 SYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVI 241
           SYILTGVGAN+VSWLILPRNAVS+GASGAVFGLFTISV VKMSWDWRKILEV ILGQFV+
Sbjct: 186 SYILTGVGANLVSWLILPRNAVSIGASGAVFGLFTISVFVKMSWDWRKILEVFILGQFVV 245

Query: 242 EKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDASTL 301
           E+VMEAAQASTALS  FRG SALQ++NH+AHLSGALVGV LVWL+S++PS+PPDQ+ S L
Sbjct: 246 ERVMEAAQASTALSSGFRGSSALQSINHIAHLSGALVGVFLVWLISKVPSEPPDQEVSKL 305

Query: 302 HRK 305
           HRK
Sbjct: 306 HRK 308

[Close]
BLAST of Cp4.1LG02g05020 vs. TrEMBL
Match: A0A0A7E7W0_9AQUA (Rhomboid-like protein (Fragment) OS=Ilex purpurea PE=2 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 1.4e-105
Identity = 194/228 (85.09%), Postives = 209/228 (91.67%), Query Frame = 1 

Query: 77  CKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQVRSIGALYLYHN 136
           CKMND+D+ISQLEL K  + RKPEK+VNGIFWI+LLNIG+YVADH FQVR I ALYLYHN
Sbjct: 90  CKMNDSDMISQLELRKLDEKRKPEKQVNGIFWILLLNIGMYVADHFFQVRGIRALYLYHN 149

Query: 137 RPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWL 196
            PAWYQF T+TFCHANWNHLSSNLFFLYIFGKLVEEEEG+FALWLSYILTG GAN+VSWL
Sbjct: 150 WPAWYQFVTSTFCHANWNHLSSNLFFLYIFGKLVEEEEGSFALWLSYILTGAGANLVSWL 209

Query: 197 ILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSG 256
           +LPRNAVSVGASGAVFGLF ISVLVKMSWDWRKILEVLILGQFVIE+VMEAAQAST LSG
Sbjct: 210 VLPRNAVSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVIERVMEAAQASTGLSG 269

Query: 257 SFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDASTLHRK 305
           S  GG ALQNVNH+AHLSGALVGVVLVWLLSR+PSQ PDQD  ++ RK
Sbjct: 270 S--GGYALQNVNHIAHLSGALVGVVLVWLLSRVPSQLPDQDVPSIQRK 315

[Close]
BLAST of Cp4.1LG02g05020 vs. TrEMBL
Match: A0A0A7E841_LONJA (Rhomboid-like protein (Fragment) OS=Lonicera japonica PE=2 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 4.0e-105
Identity = 209/301 (69.44%), Postives = 241/301 (80.07%), Query Frame = 1 

Query: 4   RLQQLHGSRILKPRGLREQMATTSIAHLSSFSSSSLRFSSPLFHPLSSSLSVAQFSNVLR 63
           ++QQL  +  L+P     ++   ++A +  F SS  R  SP F  +SS       +N L 
Sbjct: 18  QIQQLSSALNLRPYSFSCKLTPMAMA-MPPFLSSFNR--SPKFPSISSPKLNTTLNNPLF 77

Query: 64  LRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIF 123
           L  R+T ++   +CK+ND+D+ISQLE+GKP + RKPEK +NGIFWI+LLNIG+YVADH+F
Sbjct: 78  L-FRATRSR--LLCKINDSDMISQLEIGKPEEKRKPEKSMNGIFWILLLNIGLYVADHLF 137

Query: 124 QVRSIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY 183
           QVR I  LYL H RP WYQF TATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY
Sbjct: 138 QVRGISDLYLDHYRPVWYQFVTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY 197

Query: 184 ILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK 243
           ILTG GAN+VSWLILPRNAVSVGASGAVFGLF ISV VK+SWDWRKILEVLILGQFVIE+
Sbjct: 198 ILTGAGANLVSWLILPRNAVSVGASGAVFGLFAISVFVKISWDWRKILEVLILGQFVIER 257

Query: 244 VMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDASTLHR 303
           VMEAAQAST LS    GGSALQNVNH+AHLSGAL+GV LVWL+SR+PSQ PDQD STL +
Sbjct: 258 VMEAAQASTGLS---NGGSALQNVNHIAHLSGALIGVALVWLISRVPSQAPDQDLSTLKK 309

Query: 304 K 305
           K
Sbjct: 318 K 309

[Close]
BLAST of Cp4.1LG02g05020 vs. TrEMBL
Match: A0A0A7E6L4_9APIA (Rhomboid-like protein OS=Hedera nepalensis PE=2 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 3.4e-104
Identity = 198/277 (71.48%), Postives = 227/277 (81.95%), Query Frame = 1 

Query: 30  HLSSFSSSSLRFSSPLFHPLSSSLSVAQFSNVLRLRA--RSTAAKPIAMCKMNDADLISQ 89
           + SS  ++ +   S  F+PL   L  + F    R+    R    +   +CKM  +D+ISQ
Sbjct: 15  YFSSSCTTMVMAPSFKFNPLLPKLP-SSFQRFTRINTPLRMQPNRSRFICKMKSSDMISQ 74

Query: 90  LELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQVRSIGALYLYHNRPAWYQFFTAT 149
           LELGKP + RKP K+VNGIFWI+LLNIG+YVADH+FQV+ I  LYLYHN PAWYQF TA+
Sbjct: 75  LELGKPEERRKPVKQVNGIFWILLLNIGIYVADHLFQVQGIKVLYLYHNWPAWYQFVTAS 134

Query: 150 FCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVGA 209
           FCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTG GAN+VSWL+LPRNAVSVGA
Sbjct: 135 FCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGAGANLVSWLVLPRNAVSVGA 194

Query: 210 SGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGSALQNV 269
           SGAVFGLF ISVLVKMSWDWRKILEVLILGQFVIE+VMEAA+AST+L GSFRGG ALQ+V
Sbjct: 195 SGAVFGLFAISVLVKMSWDWRKILEVLILGQFVIERVMEAARASTSLPGSFRGGYALQSV 254

Query: 270 NHVAHLSGALVGVVLVWLLSRIPSQPPDQDASTLHRK 305
           NH+AHLSGAL+GV LVWLLSR+PS   +QDAS L +K
Sbjct: 255 NHIAHLSGALIGVALVWLLSRVPSHAGEQDASALKKK 290

[Close]
BLAST of Cp4.1LG02g05020 vs. TAIR10
Match: AT5G25752.1 (AT5G25752.1 rhomboid-like protein 11)

HSP 1 Score: 368.2 bits (944), Expect = 4.8e-102
Identity = 190/275 (69.09%), Postives = 213/275 (77.45%), Query Frame = 1 

Query: 30  HLSSFSSSSLRFSSPLFH-------PLSSSLSVAQFSNVLRLRARSTAAKPIAMCKMNDA 89
           H  S   SSLRF  P  H       P +S+    QF  +   R++ T       C+ + +
Sbjct: 8   HRLSLPQSSLRFRFPPLHRRRAASSPTNSTQPPLQFRPLTVSRSQIT-------CRFSQS 67

Query: 90  DLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQVRSIGALYLYHNRPAWYQ 149
           D+  Q EL K   NRKP+KR NGIFWIIL+N+G+Y+ADH FQVR I +LYLYHN PAWYQ
Sbjct: 68  DITPQFELDKAKDNRKPQKRANGIFWIILINLGIYLADHFFQVRGIKSLYLYHNFPAWYQ 127

Query: 150 FFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNA 209
           F TATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF LWLSY+ TGVGAN+VSWL+LPRNA
Sbjct: 128 FVTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYLFTGVGANLVSWLVLPRNA 187

Query: 210 VSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGS 269
           VSVGASGAVFGLF ISVLVKMSWDWRKILEVLILGQFVIE+VMEAAQAS  LSG+  GG 
Sbjct: 188 VSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVIERVMEAAQASAGLSGTIYGGY 247

Query: 270 ALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQD 298
           +LQ VNH+AHLSGALVGVVLVWLLS+ PS   DQD
Sbjct: 248 SLQTVNHIAHLSGALVGVVLVWLLSKFPSASMDQD 275

[Close]
BLAST of Cp4.1LG02g05020 vs. TAIR10
Match: AT5G25640.1 (AT5G25640.1 Rhomboid-related intramembrane serine protease family protein)

HSP 1 Score: 116.3 bits (290), Expect = 3.3e-26
Identity = 57/85 (67.06%), Postives = 70/85 (82.35%), Query Frame = 1 

Query: 163 LYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVK 222
           L++ GK+VEEE+GNF LWLSY+ TGVGAN+VSW  LP N+   GASGAVFGLF ISVLVK
Sbjct: 5   LWLTGKIVEEEKGNFGLWLSYLFTGVGANMVSWFTLPPNSFFSGASGAVFGLFVISVLVK 64

Query: 223 MSWDWRKILEVLILGQFVIEKVMEA 248
           MS  W K LEVLILGQFV+++ +++
Sbjct: 65  MSRGWSKFLEVLILGQFVMKRFIDS 89

[Close]
BLAST of Cp4.1LG02g05020 vs. TAIR10
Match: AT5G07250.1 (AT5G07250.1 RHOMBOID-like protein 3)

HSP 1 Score: 55.5 bits (132), Expect = 6.9e-08
Identity = 48/154 (31.17%), Postives = 83/154 (53.90%), Query Frame = 1 

Query: 141 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPR 200
           ++  T  + HA   HL +N+  L   G  +E++ G   + + Y+L+G+G +++S L + R
Sbjct: 135 WRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFI-R 194

Query: 201 NAVSVGASGAVFGLFTISVLVKMSWDW----RKILEVLILGQFVIEKVMEAAQASTALSG 260
           N++SVGASGA+FGL   S+L ++  +W     KI  +L L  FVI         + A+  
Sbjct: 195 NSISVGASGALFGLLG-SMLSELFTNWTIYSNKIAALLTL-LFVI-------LINLAI-- 254

Query: 261 SFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIP 291
                  L +V++ AH+ G + G +L ++L   P
Sbjct: 255 -----GILPHVDNFAHVGGFVTGFLLGFILLARP 271

[Close]
BLAST of Cp4.1LG02g05020 vs. TAIR10
Match: AT1G12750.1 (AT1G12750.1 RHOMBOID-like protein 6)

HSP 1 Score: 53.1 bits (126), Expect = 3.4e-07
Identity = 48/153 (31.37%), Postives = 80/153 (52.29%), Query Frame = 1 

Query: 141 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPR 200
           ++  TA + HA   HL  N+F + IFG  +E++ G   + L Y+++G G +I+S L L +
Sbjct: 98  WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFLQK 157

Query: 201 NAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQASTALSGS 260
            ++SVGASGA+ GL   ++L ++  +W   +  L  L+   F+I     A   +  L   
Sbjct: 158 -SISVGASGALLGLMG-AMLSELLTNWTIYKSKLCALLSFLFII-----AINLAIGL--- 217

Query: 261 FRGGSALQNVNHVAHLSGALVGVVLVWLLSRIP 291
                 L  V++ AH+ G L G  L ++L   P
Sbjct: 218 ------LPWVDNFAHIGGLLTGFCLGFILLMQP 234

[Close]
BLAST of Cp4.1LG02g05020 vs. TAIR10
Match: AT2G29050.1 (AT2G29050.1 RHOMBOID-like 1)

HSP 1 Score: 50.8 bits (120), Expect = 1.7e-06
Identity = 35/106 (33.02%), Postives = 59/106 (55.66%), Query Frame = 1 

Query: 125 VRSIGAL---YLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWL 184
           +  +GAL    + H    W + FT  + HA   H+ +N+  L   G  +E+E G   + L
Sbjct: 112 LEKMGALDVSMVVHKHEVW-RLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGL 171

Query: 185 SYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDW 228
            Y+++G G +++S L   R  +SVGASGA+FGL   ++L ++  +W
Sbjct: 172 LYMISGFGGSLLSSLF-NRAGISVGASGALFGLLG-AMLSELLTNW 214

[Close]
BLAST of Cp4.1LG02g05020 vs. NCBI nr
Match: gi|659132526|ref|XP_008466245.1| (PREDICTED: protein rhomboid-like isoform X1 [Cucumis melo])

HSP 1 Score: 486.9 bits (1252), Expect = 2.6e-134
Identity = 259/309 (83.82%), Postives = 271/309 (87.70%), Query Frame = 1 

Query: 1   MQSRLQQL--HGSRILKPRGL-REQMATTSIAHLSSFSSSSLRFSSPLFHPLSSSLSVAQ 60
           MQ +LQQL  HG RI KP  L   QM  TSI+  SSF+ +SLRF SP FH      S+ Q
Sbjct: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFH------SLPQ 60

Query: 61  FSNVLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVY 120
           F++VL L +RS   KPIA CKMNDADLISQLELGKPLQNRK EKRVNGIFWIILLNIG+Y
Sbjct: 61  FTHVLPLHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIY 120

Query: 121 VADHIFQVRSIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180
           VADHIFQVR+IGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF
Sbjct: 121 VADHIFQVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180

Query: 181 ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240
           ALWLSYILTGVGAN+VSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG
Sbjct: 181 ALWLSYILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240

Query: 241 QFVIEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQD 300
           QFVIEKVMEAAQASTALSGSFRGG   QNVNHVAHLSGALVGV+LVWLLSRIPSQ  DQD
Sbjct: 241 QFVIEKVMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQD 300

Query: 301 ASTLHRKVR 307
           AS LHRK R
Sbjct: 301 ASALHRKGR 303

[Close]
BLAST of Cp4.1LG02g05020 vs. NCBI nr
Match: gi|778687331|ref|XP_011652547.1| (PREDICTED: uncharacterized protein LOC101215506 isoform X1 [Cucumis sativus])

HSP 1 Score: 480.3 bits (1235), Expect = 2.5e-132
Identity = 257/309 (83.17%), Postives = 271/309 (87.70%), Query Frame = 1 

Query: 1   MQSRLQQ--LHGSRILKPRGL-REQMATTSIAHLSSFSSSSLRFSSPLFHPLSSSLSVAQ 60
           MQ +LQQ  LHG RI KP  L   QM  TSI+  SSF+ +SLRFSSP  H      S+ Q
Sbjct: 1   MQLQLQQQLLHGGRISKPPTLCNNQMPLTSISFQSSFTLTSLRFSSPFLH------SLPQ 60

Query: 61  FSNVLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVY 120
           F++VL L +R    KPIA CKMNDADLISQLELGKPLQNRK EKRVNGIFWIILLNIG+Y
Sbjct: 61  FTHVLPLHSRFFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIY 120

Query: 121 VADHIFQVRSIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180
           VADH+FQVR+IGALYLYH+RPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF
Sbjct: 121 VADHVFQVRNIGALYLYHSRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180

Query: 181 ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240
           ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG
Sbjct: 181 ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240

Query: 241 QFVIEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQD 300
           QFVIEKVMEAAQASTALSGSFRG S LQNVNHVAHLSGALVGV+LVWLLSR+PSQ  DQD
Sbjct: 241 QFVIEKVMEAAQASTALSGSFRGYS-LQNVNHVAHLSGALVGVLLVWLLSRVPSQSSDQD 300

Query: 301 ASTLHRKVR 307
           AS LHRK R
Sbjct: 301 ASALHRKGR 302

[Close]
BLAST of Cp4.1LG02g05020 vs. NCBI nr
Match: gi|659132528|ref|XP_008466246.1| (PREDICTED: protein rhomboid-like isoform X2 [Cucumis melo])

HSP 1 Score: 416.4 bits (1069), Expect = 4.4e-113
Identity = 208/220 (94.55%), Postives = 212/220 (96.36%), Query Frame = 1 

Query: 87  QLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQVRSIGALYLYHNRPAWYQFFTA 146
           QLELGKPLQNRK EKRVNGIFWIILLNIG+YVADHIFQVR+IGALYLYHNRPAWYQFFTA
Sbjct: 2   QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIFQVRNIGALYLYHNRPAWYQFFTA 61

Query: 147 TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVG 206
           TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGAN+VSWLILPRNAVSVG
Sbjct: 62  TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANVVSWLILPRNAVSVG 121

Query: 207 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGSALQN 266
           ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGG   QN
Sbjct: 122 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGHPSQN 181

Query: 267 VNHVAHLSGALVGVVLVWLLSRIPSQPPDQDASTLHRKVR 307
           VNHVAHLSGALVGV+LVWLLSRIPSQ  DQDAS LHRK R
Sbjct: 182 VNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALHRKGR 221

[Close]
BLAST of Cp4.1LG02g05020 vs. NCBI nr
Match: gi|449437036|ref|XP_004136298.1| (PREDICTED: presenilins-associated rhomboid-like protein, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 411.8 bits (1057), Expect = 1.1e-111
Identity = 207/220 (94.09%), Postives = 213/220 (96.82%), Query Frame = 1 

Query: 87  QLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQVRSIGALYLYHNRPAWYQFFTA 146
           QLELGKPLQNRK EKRVNGIFWIILLNIG+YVADH+FQVR+IGALYLYH+RPAWYQFFTA
Sbjct: 2   QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVFQVRNIGALYLYHSRPAWYQFFTA 61

Query: 147 TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVG 206
           TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVG
Sbjct: 62  TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVG 121

Query: 207 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGSALQN 266
           ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRG S LQN
Sbjct: 122 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGYS-LQN 181

Query: 267 VNHVAHLSGALVGVVLVWLLSRIPSQPPDQDASTLHRKVR 307
           VNHVAHLSGALVGV+LVWLLSR+PSQ  DQDAS LHRK R
Sbjct: 182 VNHVAHLSGALVGVLLVWLLSRVPSQSSDQDASALHRKGR 220

[Close]
BLAST of Cp4.1LG02g05020 vs. NCBI nr
Match: gi|703148897|ref|XP_010109463.1| (Putative rhomboid protease ydcA [Morus notabilis])

HSP 1 Score: 396.4 bits (1017), Expect = 4.7e-107
Identity = 189/243 (77.78%), Postives = 214/243 (88.07%), Query Frame = 1 

Query: 62  LRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADH 121
           L  R    AA+P  +CKM+D+D++SQLELGKP + RKP K+V GIFWIILLN+G+Y ADH
Sbjct: 66  LPFRPLFAAARPRTLCKMSDSDIMSQLELGKPEERRKPHKQVTGIFWIILLNLGIYAADH 125

Query: 122 IFQVRSIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWL 181
           +FQVR+I  LYLYH  P WYQF TATFCHA+W HLSSNLFFLYIFGKLVEEEEGNF LWL
Sbjct: 126 VFQVRAIKDLYLYHGYPEWYQFLTATFCHADWRHLSSNLFFLYIFGKLVEEEEGNFGLWL 185

Query: 182 SYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVI 241
           SYILTGVGAN+VSWLILPRNAVS+GASGAVFGLFTISV VKMSWDWRKILEV ILGQFV+
Sbjct: 186 SYILTGVGANLVSWLILPRNAVSIGASGAVFGLFTISVFVKMSWDWRKILEVFILGQFVV 245

Query: 242 EKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDASTL 301
           E+VMEAAQASTALS  FRG SALQ++NH+AHLSGALVGV LVWL+S++PS+PPDQ+ S L
Sbjct: 246 ERVMEAAQASTALSSGFRGSSALQSINHIAHLSGALVGVFLVWLISKVPSEPPDQEVSKL 305

Query: 302 HRK 305
           HRK
Sbjct: 306 HRK 308

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g05020 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RBL11_ARATH8.5e-10169.09Rhomboid-like protein 11, chloroplastic OS=Arabidopsis thaliana GN=RBL11 PE=1 SV... [more]
RBL3_ARATH1.2e-0631.17RHOMBOID-like protein 3 OS=Arabidopsis thaliana GN=RBL3 PE=2 SV=1[more]
RBL6_ARATH6.1e-0631.37RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana GN=RBL6 PE=2 SV=1[more]
BLAST of Cp4.1LG02g05020 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LEK4_CUCSA1.7e-13283.17Rhomboid-like protein OS=Cucumis sativus GN=Csa_3G889110 PE=3 SV=1[more]
W9SRK1_9ROSA3.3e-10777.78Rhomboid-like protein OS=Morus notabilis GN=L484_001802 PE=3 SV=1[more]
A0A0A7E7W0_9AQUA1.4e-10585.09Rhomboid-like protein (Fragment) OS=Ilex purpurea PE=2 SV=1[more]
A0A0A7E841_LONJA4.0e-10569.44Rhomboid-like protein (Fragment) OS=Lonicera japonica PE=2 SV=1[more]
A0A0A7E6L4_9APIA3.4e-10471.48Rhomboid-like protein OS=Hedera nepalensis PE=2 SV=1[more]
BLAST of Cp4.1LG02g05020 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G25752.14.8e-10269.09 rhomboid-like protein 11[more]
AT5G25640.13.3e-2667.06 Rhomboid-related intramembrane serine protease family protein[more]
AT5G07250.16.9e-0831.17 RHOMBOID-like protein 3[more]
AT1G12750.13.4e-0731.37 RHOMBOID-like protein 6[more]
AT2G29050.11.7e-0633.02 RHOMBOID-like 1[more]
BLAST of Cp4.1LG02g05020 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659132526|ref|XP_008466245.1|2.6e-13483.82PREDICTED: protein rhomboid-like isoform X1 [Cucumis melo][more]
gi|778687331|ref|XP_011652547.1|2.5e-13283.17PREDICTED: uncharacterized protein LOC101215506 isoform X1 [Cucumis sativus][more]
gi|659132528|ref|XP_008466246.1|4.4e-11394.55PREDICTED: protein rhomboid-like isoform X2 [Cucumis melo][more]
gi|449437036|ref|XP_004136298.1|1.1e-11194.09PREDICTED: presenilins-associated rhomboid-like protein, mitochondrial isoform X... [more]
gi|703148897|ref|XP_010109463.1|4.7e-10777.78Putative rhomboid protease ydcA [Morus notabilis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: INTERPRO
TermDefinition
IPR022764Peptidase_S54_rhomboid_dom
IPR002610Peptidase_S54_rhomboid
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
biological_process GO:0080140 regulation of jasmonic acid metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0019904 protein domain specific binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g05020.1Cp4.1LG02g05020.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002610Peptidase S54, rhomboidPANTHERPTHR22936RHOMBOID-RELATEDcoord: 50..302
score: 2.9E
IPR022764Peptidase S54, rhomboid domainGENE3DG3DSA:1.20.1540.10coord: 107..287
score: 2.6
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 137..289
score: 1.4
NoneNo IPR availablePANTHERPTHR22936:SF32SUBFAMILY NOT NAMEDcoord: 50..302
score: 2.9E
NoneNo IPR availableunknownSSF144091Rhomboid-likecoord: 104..292
score: 1.03

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG02g05020Cucsa.311380Cucumber (Gy14) v1cgycpeB0824
Cp4.1LG02g05020CmaCh01G015960Cucurbita maxima (Rimu)cmacpeB490
Cp4.1LG02g05020CmoCh01G016440Cucurbita moschata (Rifu)cmocpeB448
Cp4.1LG02g05020Cla023002Watermelon (97103) v1cpewmB584
Cp4.1LG02g05020Csa3G889110Cucumber (Chinese Long) v2cpecuB557
Cp4.1LG02g05020MELO3C003582Melon (DHL92) v3.5.1cpemeB515
Cp4.1LG02g05020ClCG11G014010Watermelon (Charleston Gray)cpewcgB490
Cp4.1LG02g05020CSPI03G44980Wild cucumber (PI 183967)cpecpiB559
Cp4.1LG02g05020Lsi04G022230Bottle gourd (USVL1VR-Ls)cpelsiB463
Cp4.1LG02g05020MELO3C003582.2Melon (DHL92) v3.6.1cpemedB613
Cp4.1LG02g05020CsaV3_3G047410Cucumber (Chinese Long) v3cpecucB0694
Cp4.1LG02g05020Bhi09G002049Wax gourdcpewgoB0726
Cp4.1LG02g05020CsGy3G042470Cucumber (Gy14) v2cgybcpeB388
Cp4.1LG02g05020Carg25621Silver-seed gourdcarcpeB1405
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG02g05020Wax gourdcpewgoB0688
Cp4.1LG02g05020Cucurbita pepo (Zucchini)cpecpeB120
Cp4.1LG02g05020Cucurbita pepo (Zucchini)cpecpeB467
Cp4.1LG02g05020Cucurbita pepo (Zucchini)cpecpeB472
Cp4.1LG02g05020Cucumber (Gy14) v1cgycpeB0436
Cp4.1LG02g05020Cucurbita maxima (Rimu)cmacpeB053
Cp4.1LG02g05020Cucurbita maxima (Rimu)cmacpeB191
Cp4.1LG02g05020Cucurbita maxima (Rimu)cmacpeB779
Cp4.1LG02g05020Cucurbita moschata (Rifu)cmocpeB028
Cp4.1LG02g05020Cucurbita moschata (Rifu)cmocpeB167
Cp4.1LG02g05020Cucurbita moschata (Rifu)cmocpeB733
Cp4.1LG02g05020Wild cucumber (PI 183967)cpecpiB540
Cp4.1LG02g05020Cucumber (Chinese Long) v2cpecuB538
Cp4.1LG02g05020Bottle gourd (USVL1VR-Ls)cpelsiB478
Cp4.1LG02g05020Watermelon (Charleston Gray)cpewcgB529
Cp4.1LG02g05020Watermelon (97103) v1cpewmB542
Cp4.1LG02g05020Melon (DHL92) v3.5.1cpemeB513
Cp4.1LG02g05020Cucumber (Gy14) v2cgybcpeB223
Cp4.1LG02g05020Melon (DHL92) v3.6.1cpemedB610
Cp4.1LG02g05020Silver-seed gourdcarcpeB0082
Cp4.1LG02g05020Silver-seed gourdcarcpeB0902
Cp4.1LG02g05020Silver-seed gourdcarcpeB1363
Cp4.1LG02g05020Cucumber (Chinese Long) v3cpecucB0673