Cp4.1LG02g05020.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG02g05020.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Rhomboid-like protein
Location	Cp4.1LG02 : 2100877 .. 2104341 (+)
Sequence length	1169

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGAGCTGCTCTGAAATCCCCGACTGAACGATGCAATCGCGGTTGCAGCAGCTCCATGGGAGCCGAATATTGAAACCTCGTGGACTACGCGAGCAAATGGCTACGACTTCCATTGCTCATCTCTCAAGCTTCAGCTCAAGCTCACTCAGATTCTCCTCTCCATTATTTCACCCGCTCTCATCGTCTCTTTCCGTTGCTCAATTTAGCAATGTTCTTCGTCTTCGCGCTCGTTCCACTGCTGCGAAACCTATCGCGATGTGCAAAATGAACGATGCAGGTTGTTCTTTTTCTTTTTTTGTTCTTCTGCGTTATTTTCAACAATTTATCTGTTTATTCATGATTTTATTGTGGAATTTTTGCTGAATTAGAAGGGGATTTTGTGATTTTTATTGATGAATATGCGTGCGGTTGAATGAAAGTAAAGAAGAATTTTGTTTTTAAATGTTTGTTAGATTTGATATCACAGTTGGAGCTGGGGAAACCACTGCAGAATCGGAAACCGGAGAAGCGTGTTAATGGTATATTCTGGATCATTCTTCTCAACATTGGAGTATATGTGGCCGATCACATTTTTCAGGTACGAGTTCTGTTACCACATGCTATCAAGTCTAATGCTATTTGCCTATAGAGATTGAGAAAGAAAGAGCCCCAAAATATTGCCCGAAACTTGAGGAATACTGAATGAACTATTTGTCAAAGCTGATTGTTATAGGGCATTGATAGGTTAATCCACTCGTAAGCAGATTATTAACAGTAAACCGTTTTATTAGGGAATATGAAAAGATACATTCTAAAAGTATTAGATTCATAGCAGTCAACTTAGCTAGTTAAAAACTTGATTCTCGAGTTGAAGCAACTCAAAAGCTTAAGTTGATGGGTGATGGTAACTTTAATTATATCAACATTTTAACATTCTCCTTGTTTATGGGCTTGAAAGTTTGTAATATGCTCAACTAGTAGAAATCAATATTACTTGGGGAGTAGAGAATGGTAGGGCTTTTTTCTTTTCTTTTTTTTTTAATTTTGTGATAAGGAATCAACCGTGAGGAAAGCTCTATACCAAATGATAAGGAATCAACCCAAACCCAAGAGAAAGCTCTAATACAAAATGCTAAGGAATCACGGTAAGAGAAGTAAGATTCGGATTACCTTGTTGATCAAATATATTAAGGCAAGAACACTTGTTTGAGATTTGAATCACTCCAGGAGTAAAATTGATCATGTCAAACTTGAATGATTCTACATGCAACCTAAACTATATAGAATTGCAAAGAAACTTAGCATTTGGCAAAAGGAAAGCACAAATACTCTTTTTACTACATTTTTCAAGTCTTCTCTGCAAAGATAACATATATGGCTTTATATAGCCTCAAAATGAAAACTCTTAACCTTCTATGAGGTATTCCTAGAGTTGTAATTTTCATACTTTATGACCATAATTAATCACTATGTAAATAGGTCTTAAAATACATTAAAGAAACACATAACTCTAAATTATCATCCACCCAAAATTTGTAACCATCCAAGAATAAATAAATGGAGCTTGATTCTTCTTTAATGTGGCATGAATTGCAACATCTTGGGATAATTTGAACAACATTTTCTTCACATCTTCCTTCAAAATTTATCTTGTATGATTGATGCCTTGGTTCATATCACTTTGTTACTCAAACACCGAGATGCTTGTACTCAATTACTAAATTCTCTTTTTCATAGGTTCGTAGTATAGGAGCTCTGTACTTGTACCACAATCGTCCTGCATGGTATCAATTTTTTACAGCAACATTTTGTCATGCTAATTGGTGAGTTTTTGGGCTCTTCAAAATCATGCAAATTTTACATTTCTCGTCTACCTTGAATGGATCGATGGAGTTAGAAGCTTGTTATCTTCTCATGAGAATGCAATTTTCTGGTTTTACAAGCATGACTTAGTGGAATACTTACTATTTCCATGAATGTTTTGCAGGAACCATCTCTCTAGCAATCTTTTTTTCTTGTATATATTTGGTGAGACCCACACTTGACTTCCCTCCCCTCCCCTCCCCTCCAAGAAAATGAATGTTCTAATGTATGGATTTCTACTTTATTTCTTGGAGGTGGAAGCCATAAAATAGCCCTAATGTTTTGACATTTAATAGTTCCATTATTTTTTATGAACAGGAAAACTTGTTGAGGAAGAGGAAGGAAACTTTGCTTTGTGGCTTTCCTATATTCTTACTGGTGTAGGTGCAAACATTGTTTCATGGCTAATTTTACCAAGAAATGCTGTATCAGTTGGAGCTTCTGGTGCTGTTTTTGGGTTGTTTACTATAAGTGTCCTTGTAAAGGTATCTATCTAAAACTTATGATTTATCACTCTCATTTCGATTTTGGTGCATTTTAACTAAGATATTTCTTCGTGGCAGATGTCTTGGGACTGGAGGAAGATCCTCGAAGTCCTTATACTTGGTCAATTTGTTATAGAGAAGGTAGTGCATTCTCTTTTTACTCCCATGTGAATGATCTTAAACACTCAGACAAGCAACTTCTCTAAATAGTTGCTAAATGGGAATGCATGTAACAGTCCAAACTCACCGCCGCTAGCCGATATTGTCCTATTTGAACTTTCCCTTTCAAGCTTTCCCTAAAGGTTTTTAAAATGCATCTGCTAGGGAGAGGTTTTCACACCCTTATAAAAAATGTTTTGTTCTCCTCCCCAACCGATGTGGGATCTCACAATGCATGACTACACTATGCAAGTCATTGTTTAAGATGTTCATTATTCTTTTGCTCTATCTTTTATCTAATGGATCCGACAAGTAAAAATATAGATATTGTAAATCTAAGTACAGTTAAATTAGTTAAGGTTTATATTCTCAAAAGAGATCATAATCCTCTAACTTCCACATGTTGTTGAACTAAAAATGTGGAACTAAAACAAAGTAACGGAGTAGTTGAAATAGAATTAAACTCTCTCTTTTCATTTATTTCTAAAAGCATAAATCTTGTGGTTGGTTTCTGTAAAACATAAGGTGAGGGAACTTTCTTATCCATATGCTTTGCTTGGTCACTATAGGTCATGGAAGCAGCCCAAGCTTCAACTGCACTGTCAGGAAGCTTCCGCGGAGGATCTGCCTTGCAGAATGTTAACCATGTTGCTCATCTCTCTGGGGCGCTCGTCGGTGTCGTTCTGGTATGGCTTCTCAGTAGAATTCCTTCTCAACCTCCTGATCAAGATGCATCAACTTTGCACAGGAAAGTAAGATGATTGCACAAGCAATTCTGCTTTGAAATAGAACAATATACTCTGCCCTTATCTTCTTGTTTTGTTCTCATTTAGGAAACAGTATCCATTCATCTTCCTATTTGTATCTTGTGTAAAATATTTTATATAGGATTGTGGCTATAGGTTTGCAAGTGTAAAAGTAATATTGGCATGGATGGAACGAATTTTCTTGACAACTAAATGTAATAGCAAGACGATTT

mRNA sequence

CGGAGCTGCTCTGAAATCCCCGACTGAACGATGCAATCGCGGTTGCAGCAGCTCCATGGGAGCCGAATATTGAAACCTCGTGGACTACGCGAGCAAATGGCTACGACTTCCATTGCTCATCTCTCAAGCTTCAGCTCAAGCTCACTCAGATTCTCCTCTCCATTATTTCACCCGCTCTCATCGTCTCTTTCCGTTGCTCAATTTAGCAATGTTCTTCGTCTTCGCGCTCGTTCCACTGCTGCGAAACCTATCGCGATGTGCAAAATGAACGATGCAGATTTGATATCACAGTTGGAGCTGGGGAAACCACTGCAGAATCGGAAACCGGAGAAGCGTGTTAATGGTATATTCTGGATCATTCTTCTCAACATTGGAGTATATGTGGCCGATCACATTTTTCAGGTTCGTAGTATAGGAGCTCTGTACTTGTACCACAATCGTCCTGCATGGTATCAATTTTTTACAGCAACATTTTGTCATGCTAATTGGAACCATCTCTCTAGCAATCTTTTTTTCTTGTATATATTTGGAAAACTTGTTGAGGAAGAGGAAGGAAACTTTGCTTTGTGGCTTTCCTATATTCTTACTGGTGTAGGTGCAAACATTGTTTCATGGCTAATTTTACCAAGAAATGCTGTATCAGTTGGAGCTTCTGGTGCTGTTTTTGGGTTGTTTACTATAAGTGTCCTTGTAAAGATGTCTTGGGACTGGAGGAAGATCCTCGAAGTCCTTATACTTGGTCAATTTGTTATAGAGAAGGTCATGGAAGCAGCCCAAGCTTCAACTGCACTGTCAGGAAGCTTCCGCGGAGGATCTGCCTTGCAGAATGTTAACCATGTTGCTCATCTCTCTGGGGCGCTCGTCGGTGTCGTTCTGGTATGGCTTCTCAGTAGAATTCCTTCTCAACCTCCTGATCAAGATGCATCAACTTTGCACAGGAAAGTAAGATGATTGCACAAGCAATTCTGCTTTGAAATAGAACAATATACTCTGCCCTTATCTTCTTGTTTTGTTCTCATTTAGGAAACAGTATCCATTCATCTTCCTATTTGTATCTTGTGTAAAATATTTTATATAGGATTGTGGCTATAGGTTTGCAAGTGTAAAAGTAATATTGGCATGGATGGAACGAATTTTCTTGACAACTAAATGTAATAGCAAGACGATTT

Coding sequence (CDS)

ATGCAATCGCGGTTGCAGCAGCTCCATGGGAGCCGAATATTGAAACCTCGTGGACTACGCGAGCAAATGGCTACGACTTCCATTGCTCATCTCTCAAGCTTCAGCTCAAGCTCACTCAGATTCTCCTCTCCATTATTTCACCCGCTCTCATCGTCTCTTTCCGTTGCTCAATTTAGCAATGTTCTTCGTCTTCGCGCTCGTTCCACTGCTGCGAAACCTATCGCGATGTGCAAAATGAACGATGCAGATTTGATATCACAGTTGGAGCTGGGGAAACCACTGCAGAATCGGAAACCGGAGAAGCGTGTTAATGGTATATTCTGGATCATTCTTCTCAACATTGGAGTATATGTGGCCGATCACATTTTTCAGGTTCGTAGTATAGGAGCTCTGTACTTGTACCACAATCGTCCTGCATGGTATCAATTTTTTACAGCAACATTTTGTCATGCTAATTGGAACCATCTCTCTAGCAATCTTTTTTTCTTGTATATATTTGGAAAACTTGTTGAGGAAGAGGAAGGAAACTTTGCTTTGTGGCTTTCCTATATTCTTACTGGTGTAGGTGCAAACATTGTTTCATGGCTAATTTTACCAAGAAATGCTGTATCAGTTGGAGCTTCTGGTGCTGTTTTTGGGTTGTTTACTATAAGTGTCCTTGTAAAGATGTCTTGGGACTGGAGGAAGATCCTCGAAGTCCTTATACTTGGTCAATTTGTTATAGAGAAGGTCATGGAAGCAGCCCAAGCTTCAACTGCACTGTCAGGAAGCTTCCGCGGAGGATCTGCCTTGCAGAATGTTAACCATGTTGCTCATCTCTCTGGGGCGCTCGTCGGTGTCGTTCTGGTATGGCTTCTCAGTAGAATTCCTTCTCAACCTCCTGATCAAGATGCATCAACTTTGCACAGGAAAGTAAGATGA

Protein sequence

MQSRLQQLHGSRILKPRGLREQMATTSIAHLSSFSSSSLRFSSPLFHPLSSSLSVAQFSNVLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQVRSIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDASTLHRKVR

Homology

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BLAST of Cp4.1LG02g05020.1 vs. Swiss-Prot
Match: RBL11_ARATH (Rhomboid-like protein 11, chloroplastic OS=Arabidopsis thaliana GN=RBL11 PE=1 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 8.5e-101
Identity = 190/275 (69.09%), Postives = 213/275 (77.45%), Query Frame = 1


Query: 30  HLSSFSSSSLRFSSPLFH-------PLSSSLSVAQFSNVLRLRARSTAAKPIAMCKMNDA 89
           H  S   SSLRF  P  H       P +S+    QF  +   R++ T       C+ + +
Sbjct: 8   HRLSLPQSSLRFRFPPLHRRRAASSPTNSTQPPLQFRPLTVSRSQIT-------CRFSQS 67

Query: 90  DLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQVRSIGALYLYHNRPAWYQ 149
           D+  Q EL K   NRKP+KR NGIFWIIL+N+G+Y+ADH FQVR I +LYLYHN PAWYQ
Sbjct: 68  DITPQFELDKAKDNRKPQKRANGIFWIILINLGIYLADHFFQVRGIKSLYLYHNFPAWYQ 127

Query: 150 FFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNA 209
           F TATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF LWLSY+ TGVGAN+VSWL+LPRNA
Sbjct: 128 FVTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYLFTGVGANLVSWLVLPRNA 187

Query: 210 VSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGS 269
           VSVGASGAVFGLF ISVLVKMSWDWRKILEVLILGQFVIE+VMEAAQAS  LSG+  GG 
Sbjct: 188 VSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVIERVMEAAQASAGLSGTIYGGY 247

Query: 270 ALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQD 298
           +LQ VNH+AHLSGALVGVVLVWLLS+ PS   DQD
Sbjct: 248 SLQTVNHIAHLSGALVGVVLVWLLSKFPSASMDQD 275

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BLAST of Cp4.1LG02g05020.1 vs. Swiss-Prot
Match: RBL3_ARATH (RHOMBOID-like protein 3 OS=Arabidopsis thaliana GN=RBL3 PE=2 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 1.2e-06
Identity = 48/154 (31.17%), Postives = 83/154 (53.90%), Query Frame = 1


Query: 141 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPR 200
           ++  T  + HA   HL +N+  L   G  +E++ G   + + Y+L+G+G +++S L + R
Sbjct: 135 WRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFI-R 194

Query: 201 NAVSVGASGAVFGLFTISVLVKMSWDW----RKILEVLILGQFVIEKVMEAAQASTALSG 260
           N++SVGASGA+FGL   S+L ++  +W     KI  +L L  FVI         + A+  
Sbjct: 195 NSISVGASGALFGLLG-SMLSELFTNWTIYSNKIAALLTL-LFVI-------LINLAI-- 254

Query: 261 SFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIP 291
                  L +V++ AH+ G + G +L ++L   P
Sbjct: 255 -----GILPHVDNFAHVGGFVTGFLLGFILLARP 271

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BLAST of Cp4.1LG02g05020.1 vs. Swiss-Prot
Match: RBL6_ARATH (RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana GN=RBL6 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.1e-06
Identity = 48/153 (31.37%), Postives = 80/153 (52.29%), Query Frame = 1


Query: 141 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPR 200
           ++  TA + HA   HL  N+F + IFG  +E++ G   + L Y+++G G +I+S L L +
Sbjct: 98  WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFLQK 157

Query: 201 NAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQASTALSGS 260
            ++SVGASGA+ GL   ++L ++  +W   +  L  L+   F+I     A   +  L   
Sbjct: 158 -SISVGASGALLGLMG-AMLSELLTNWTIYKSKLCALLSFLFII-----AINLAIGL--- 217

Query: 261 FRGGSALQNVNHVAHLSGALVGVVLVWLLSRIP 291
                 L  V++ AH+ G L G  L ++L   P
Sbjct: 218 ------LPWVDNFAHIGGLLTGFCLGFILLMQP 234

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BLAST of Cp4.1LG02g05020.1 vs. TrEMBL
Match: A0A0A0LEK4_CUCSA (Rhomboid-like protein OS=Cucumis sativus GN=Csa_3G889110 PE=3 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 1.7e-132
Identity = 257/309 (83.17%), Postives = 271/309 (87.70%), Query Frame = 1


Query: 1   MQSRLQQ--LHGSRILKPRGL-REQMATTSIAHLSSFSSSSLRFSSPLFHPLSSSLSVAQ 60
           MQ +LQQ  LHG RI KP  L   QM  TSI+  SSF+ +SLRFSSP  H      S+ Q
Sbjct: 1   MQLQLQQQLLHGGRISKPPTLCNNQMPLTSISFQSSFTLTSLRFSSPFLH------SLPQ 60

Query: 61  FSNVLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVY 120
           F++VL L +R    KPIA CKMNDADLISQLELGKPLQNRK EKRVNGIFWIILLNIG+Y
Sbjct: 61  FTHVLPLHSRFFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIY 120

Query: 121 VADHIFQVRSIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180
           VADH+FQVR+IGALYLYH+RPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF
Sbjct: 121 VADHVFQVRNIGALYLYHSRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180

Query: 181 ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240
           ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG
Sbjct: 181 ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240

Query: 241 QFVIEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQD 300
           QFVIEKVMEAAQASTALSGSFRG S LQNVNHVAHLSGALVGV+LVWLLSR+PSQ  DQD
Sbjct: 241 QFVIEKVMEAAQASTALSGSFRGYS-LQNVNHVAHLSGALVGVLLVWLLSRVPSQSSDQD 300

Query: 301 ASTLHRKVR 307
           AS LHRK R
Sbjct: 301 ASALHRKGR 302

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BLAST of Cp4.1LG02g05020.1 vs. TrEMBL
Match: W9SRK1_9ROSA (Rhomboid-like protein OS=Morus notabilis GN=L484_001802 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 3.3e-107
Identity = 189/243 (77.78%), Postives = 214/243 (88.07%), Query Frame = 1


Query: 62  LRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADH 121
           L  R    AA+P  +CKM+D+D++SQLELGKP + RKP K+V GIFWIILLN+G+Y ADH
Sbjct: 66  LPFRPLFAAARPRTLCKMSDSDIMSQLELGKPEERRKPHKQVTGIFWIILLNLGIYAADH 125

Query: 122 IFQVRSIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWL 181
           +FQVR+I  LYLYH  P WYQF TATFCHA+W HLSSNLFFLYIFGKLVEEEEGNF LWL
Sbjct: 126 VFQVRAIKDLYLYHGYPEWYQFLTATFCHADWRHLSSNLFFLYIFGKLVEEEEGNFGLWL 185

Query: 182 SYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVI 241
           SYILTGVGAN+VSWLILPRNAVS+GASGAVFGLFTISV VKMSWDWRKILEV ILGQFV+
Sbjct: 186 SYILTGVGANLVSWLILPRNAVSIGASGAVFGLFTISVFVKMSWDWRKILEVFILGQFVV 245

Query: 242 EKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDASTL 301
           E+VMEAAQASTALS  FRG SALQ++NH+AHLSGALVGV LVWL+S++PS+PPDQ+ S L
Sbjct: 246 ERVMEAAQASTALSSGFRGSSALQSINHIAHLSGALVGVFLVWLISKVPSEPPDQEVSKL 305

Query: 302 HRK 305
           HRK
Sbjct: 306 HRK 308

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BLAST of Cp4.1LG02g05020.1 vs. TrEMBL
Match: A0A0A7E7W0_9AQUA (Rhomboid-like protein (Fragment) OS=Ilex purpurea PE=2 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 1.4e-105
Identity = 194/228 (85.09%), Postives = 209/228 (91.67%), Query Frame = 1


Query: 77  CKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQVRSIGALYLYHN 136
           CKMND+D+ISQLEL K  + RKPEK+VNGIFWI+LLNIG+YVADH FQVR I ALYLYHN
Sbjct: 90  CKMNDSDMISQLELRKLDEKRKPEKQVNGIFWILLLNIGMYVADHFFQVRGIRALYLYHN 149

Query: 137 RPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWL 196
            PAWYQF T+TFCHANWNHLSSNLFFLYIFGKLVEEEEG+FALWLSYILTG GAN+VSWL
Sbjct: 150 WPAWYQFVTSTFCHANWNHLSSNLFFLYIFGKLVEEEEGSFALWLSYILTGAGANLVSWL 209

Query: 197 ILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSG 256
           +LPRNAVSVGASGAVFGLF ISVLVKMSWDWRKILEVLILGQFVIE+VMEAAQAST LSG
Sbjct: 210 VLPRNAVSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVIERVMEAAQASTGLSG 269

Query: 257 SFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDASTLHRK 305
           S  GG ALQNVNH+AHLSGALVGVVLVWLLSR+PSQ PDQD  ++ RK
Sbjct: 270 S--GGYALQNVNHIAHLSGALVGVVLVWLLSRVPSQLPDQDVPSIQRK 315

[Close]

BLAST of Cp4.1LG02g05020.1 vs. TrEMBL
Match: A0A0A7E841_LONJA (Rhomboid-like protein (Fragment) OS=Lonicera japonica PE=2 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 4.0e-105
Identity = 209/301 (69.44%), Postives = 241/301 (80.07%), Query Frame = 1


Query: 4   RLQQLHGSRILKPRGLREQMATTSIAHLSSFSSSSLRFSSPLFHPLSSSLSVAQFSNVLR 63
           ++QQL  +  L+P     ++   ++A +  F SS  R  SP F  +SS       +N L 
Sbjct: 18  QIQQLSSALNLRPYSFSCKLTPMAMA-MPPFLSSFNR--SPKFPSISSPKLNTTLNNPLF 77

Query: 64  LRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIF 123
           L  R+T ++   +CK+ND+D+ISQLE+GKP + RKPEK +NGIFWI+LLNIG+YVADH+F
Sbjct: 78  L-FRATRSR--LLCKINDSDMISQLEIGKPEEKRKPEKSMNGIFWILLLNIGLYVADHLF 137

Query: 124 QVRSIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY 183
           QVR I  LYL H RP WYQF TATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY
Sbjct: 138 QVRGISDLYLDHYRPVWYQFVTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSY 197

Query: 184 ILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEK 243
           ILTG GAN+VSWLILPRNAVSVGASGAVFGLF ISV VK+SWDWRKILEVLILGQFVIE+
Sbjct: 198 ILTGAGANLVSWLILPRNAVSVGASGAVFGLFAISVFVKISWDWRKILEVLILGQFVIER 257

Query: 244 VMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDASTLHR 303
           VMEAAQAST LS    GGSALQNVNH+AHLSGAL+GV LVWL+SR+PSQ PDQD STL +
Sbjct: 258 VMEAAQASTGLS---NGGSALQNVNHIAHLSGALIGVALVWLISRVPSQAPDQDLSTLKK 309

Query: 304 K 305
           K
Sbjct: 318 K 309

[Close]

BLAST of Cp4.1LG02g05020.1 vs. TrEMBL
Match: A0A0A7E6L4_9APIA (Rhomboid-like protein OS=Hedera nepalensis PE=2 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 3.4e-104
Identity = 198/277 (71.48%), Postives = 227/277 (81.95%), Query Frame = 1


Query: 30  HLSSFSSSSLRFSSPLFHPLSSSLSVAQFSNVLRLRA--RSTAAKPIAMCKMNDADLISQ 89
           + SS  ++ +   S  F+PL   L  + F    R+    R    +   +CKM  +D+ISQ
Sbjct: 15  YFSSSCTTMVMAPSFKFNPLLPKLP-SSFQRFTRINTPLRMQPNRSRFICKMKSSDMISQ 74

Query: 90  LELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQVRSIGALYLYHNRPAWYQFFTAT 149
           LELGKP + RKP K+VNGIFWI+LLNIG+YVADH+FQV+ I  LYLYHN PAWYQF TA+
Sbjct: 75  LELGKPEERRKPVKQVNGIFWILLLNIGIYVADHLFQVQGIKVLYLYHNWPAWYQFVTAS 134

Query: 150 FCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVGA 209
           FCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTG GAN+VSWL+LPRNAVSVGA
Sbjct: 135 FCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGAGANLVSWLVLPRNAVSVGA 194

Query: 210 SGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGSALQNV 269
           SGAVFGLF ISVLVKMSWDWRKILEVLILGQFVIE+VMEAA+AST+L GSFRGG ALQ+V
Sbjct: 195 SGAVFGLFAISVLVKMSWDWRKILEVLILGQFVIERVMEAARASTSLPGSFRGGYALQSV 254

Query: 270 NHVAHLSGALVGVVLVWLLSRIPSQPPDQDASTLHRK 305
           NH+AHLSGAL+GV LVWLLSR+PS   +QDAS L +K
Sbjct: 255 NHIAHLSGALIGVALVWLLSRVPSHAGEQDASALKKK 290

[Close]

BLAST of Cp4.1LG02g05020.1 vs. TAIR10
Match: AT5G25752.1 (AT5G25752.1 rhomboid-like protein 11)

HSP 1 Score: 368.2 bits (944), Expect = 4.8e-102
Identity = 190/275 (69.09%), Postives = 213/275 (77.45%), Query Frame = 1


Query: 30  HLSSFSSSSLRFSSPLFH-------PLSSSLSVAQFSNVLRLRARSTAAKPIAMCKMNDA 89
           H  S   SSLRF  P  H       P +S+    QF  +   R++ T       C+ + +
Sbjct: 8   HRLSLPQSSLRFRFPPLHRRRAASSPTNSTQPPLQFRPLTVSRSQIT-------CRFSQS 67

Query: 90  DLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQVRSIGALYLYHNRPAWYQ 149
           D+  Q EL K   NRKP+KR NGIFWIIL+N+G+Y+ADH FQVR I +LYLYHN PAWYQ
Sbjct: 68  DITPQFELDKAKDNRKPQKRANGIFWIILINLGIYLADHFFQVRGIKSLYLYHNFPAWYQ 127

Query: 150 FFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNA 209
           F TATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF LWLSY+ TGVGAN+VSWL+LPRNA
Sbjct: 128 FVTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFGLWLSYLFTGVGANLVSWLVLPRNA 187

Query: 210 VSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGS 269
           VSVGASGAVFGLF ISVLVKMSWDWRKILEVLILGQFVIE+VMEAAQAS  LSG+  GG 
Sbjct: 188 VSVGASGAVFGLFAISVLVKMSWDWRKILEVLILGQFVIERVMEAAQASAGLSGTIYGGY 247

Query: 270 ALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQD 298
           +LQ VNH+AHLSGALVGVVLVWLLS+ PS   DQD
Sbjct: 248 SLQTVNHIAHLSGALVGVVLVWLLSKFPSASMDQD 275

[Close]

BLAST of Cp4.1LG02g05020.1 vs. TAIR10
Match: AT5G25640.1 (AT5G25640.1 Rhomboid-related intramembrane serine protease family protein)

HSP 1 Score: 116.3 bits (290), Expect = 3.3e-26
Identity = 57/85 (67.06%), Postives = 70/85 (82.35%), Query Frame = 1


Query: 163 LYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVK 222
           L++ GK+VEEE+GNF LWLSY+ TGVGAN+VSW  LP N+   GASGAVFGLF ISVLVK
Sbjct: 5   LWLTGKIVEEEKGNFGLWLSYLFTGVGANMVSWFTLPPNSFFSGASGAVFGLFVISVLVK 64

Query: 223 MSWDWRKILEVLILGQFVIEKVMEA 248
           MS  W K LEVLILGQFV+++ +++
Sbjct: 65  MSRGWSKFLEVLILGQFVMKRFIDS 89

[Close]

BLAST of Cp4.1LG02g05020.1 vs. TAIR10
Match: AT5G07250.1 (AT5G07250.1 RHOMBOID-like protein 3)

HSP 1 Score: 55.5 bits (132), Expect = 6.9e-08
Identity = 48/154 (31.17%), Postives = 83/154 (53.90%), Query Frame = 1


Query: 141 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPR 200
           ++  T  + HA   HL +N+  L   G  +E++ G   + + Y+L+G+G +++S L + R
Sbjct: 135 WRLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFI-R 194

Query: 201 NAVSVGASGAVFGLFTISVLVKMSWDW----RKILEVLILGQFVIEKVMEAAQASTALSG 260
           N++SVGASGA+FGL   S+L ++  +W     KI  +L L  FVI         + A+  
Sbjct: 195 NSISVGASGALFGLLG-SMLSELFTNWTIYSNKIAALLTL-LFVI-------LINLAI-- 254

Query: 261 SFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIP 291
                  L +V++ AH+ G + G +L ++L   P
Sbjct: 255 -----GILPHVDNFAHVGGFVTGFLLGFILLARP 271

[Close]

BLAST of Cp4.1LG02g05020.1 vs. TAIR10
Match: AT1G12750.1 (AT1G12750.1 RHOMBOID-like protein 6)

HSP 1 Score: 53.1 bits (126), Expect = 3.4e-07
Identity = 48/153 (31.37%), Postives = 80/153 (52.29%), Query Frame = 1


Query: 141 YQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPR 200
           ++  TA + HA   HL  N+F + IFG  +E++ G   + L Y+++G G +I+S L L +
Sbjct: 98  WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFLQK 157

Query: 201 NAVSVGASGAVFGLFTISVLVKMSWDW---RKILEVLILGQFVIEKVMEAAQASTALSGS 260
            ++SVGASGA+ GL   ++L ++  +W   +  L  L+   F+I     A   +  L   
Sbjct: 158 -SISVGASGALLGLMG-AMLSELLTNWTIYKSKLCALLSFLFII-----AINLAIGL--- 217

Query: 261 FRGGSALQNVNHVAHLSGALVGVVLVWLLSRIP 291
                 L  V++ AH+ G L G  L ++L   P
Sbjct: 218 ------LPWVDNFAHIGGLLTGFCLGFILLMQP 234

[Close]

BLAST of Cp4.1LG02g05020.1 vs. TAIR10
Match: AT2G29050.1 (AT2G29050.1 RHOMBOID-like 1)

HSP 1 Score: 50.8 bits (120), Expect = 1.7e-06
Identity = 35/106 (33.02%), Postives = 59/106 (55.66%), Query Frame = 1


Query: 125 VRSIGAL---YLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWL 184
           +  +GAL    + H    W + FT  + HA   H+ +N+  L   G  +E+E G   + L
Sbjct: 112 LEKMGALDVSMVVHKHEVW-RLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGL 171

Query: 185 SYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDW 228
            Y+++G G +++S L   R  +SVGASGA+FGL   ++L ++  +W
Sbjct: 172 LYMISGFGGSLLSSLF-NRAGISVGASGALFGLLG-AMLSELLTNW 214

[Close]

BLAST of Cp4.1LG02g05020.1 vs. NCBI nr
Match: gi|659132526|ref|XP_008466245.1| (PREDICTED: protein rhomboid-like isoform X1 [Cucumis melo])

HSP 1 Score: 486.9 bits (1252), Expect = 2.6e-134
Identity = 259/309 (83.82%), Postives = 271/309 (87.70%), Query Frame = 1


Query: 1   MQSRLQQL--HGSRILKPRGL-REQMATTSIAHLSSFSSSSLRFSSPLFHPLSSSLSVAQ 60
           MQ +LQQL  HG RI KP  L   QM  TSI+  SSF+ +SLRF SP FH      S+ Q
Sbjct: 1   MQFQLQQLQLHGGRISKPPTLSNNQMPLTSISLQSSFTLTSLRFPSPFFH------SLPQ 60

Query: 61  FSNVLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVY 120
           F++VL L +RS   KPIA CKMNDADLISQLELGKPLQNRK EKRVNGIFWIILLNIG+Y
Sbjct: 61  FTHVLPLHSRSFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIY 120

Query: 121 VADHIFQVRSIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180
           VADHIFQVR+IGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF
Sbjct: 121 VADHIFQVRNIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180

Query: 181 ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240
           ALWLSYILTGVGAN+VSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG
Sbjct: 181 ALWLSYILTGVGANVVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240

Query: 241 QFVIEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQD 300
           QFVIEKVMEAAQASTALSGSFRGG   QNVNHVAHLSGALVGV+LVWLLSRIPSQ  DQD
Sbjct: 241 QFVIEKVMEAAQASTALSGSFRGGHPSQNVNHVAHLSGALVGVLLVWLLSRIPSQSLDQD 300

Query: 301 ASTLHRKVR 307
           AS LHRK R
Sbjct: 301 ASALHRKGR 303

[Close]

BLAST of Cp4.1LG02g05020.1 vs. NCBI nr
Match: gi|778687331|ref|XP_011652547.1| (PREDICTED: uncharacterized protein LOC101215506 isoform X1 [Cucumis sativus])

HSP 1 Score: 480.3 bits (1235), Expect = 2.5e-132
Identity = 257/309 (83.17%), Postives = 271/309 (87.70%), Query Frame = 1


Query: 1   MQSRLQQ--LHGSRILKPRGL-REQMATTSIAHLSSFSSSSLRFSSPLFHPLSSSLSVAQ 60
           MQ +LQQ  LHG RI KP  L   QM  TSI+  SSF+ +SLRFSSP  H      S+ Q
Sbjct: 1   MQLQLQQQLLHGGRISKPPTLCNNQMPLTSISFQSSFTLTSLRFSSPFLH------SLPQ 60

Query: 61  FSNVLRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVY 120
           F++VL L +R    KPIA CKMNDADLISQLELGKPLQNRK EKRVNGIFWIILLNIG+Y
Sbjct: 61  FTHVLPLHSRFFCMKPIATCKMNDADLISQLELGKPLQNRKTEKRVNGIFWIILLNIGIY 120

Query: 121 VADHIFQVRSIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180
           VADH+FQVR+IGALYLYH+RPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF
Sbjct: 121 VADHVFQVRNIGALYLYHSRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNF 180

Query: 181 ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240
           ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG
Sbjct: 181 ALWLSYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILG 240

Query: 241 QFVIEKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQD 300
           QFVIEKVMEAAQASTALSGSFRG S LQNVNHVAHLSGALVGV+LVWLLSR+PSQ  DQD
Sbjct: 241 QFVIEKVMEAAQASTALSGSFRGYS-LQNVNHVAHLSGALVGVLLVWLLSRVPSQSSDQD 300

Query: 301 ASTLHRKVR 307
           AS LHRK R
Sbjct: 301 ASALHRKGR 302

[Close]

BLAST of Cp4.1LG02g05020.1 vs. NCBI nr
Match: gi|659132528|ref|XP_008466246.1| (PREDICTED: protein rhomboid-like isoform X2 [Cucumis melo])

HSP 1 Score: 416.4 bits (1069), Expect = 4.4e-113
Identity = 208/220 (94.55%), Postives = 212/220 (96.36%), Query Frame = 1


Query: 87  QLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQVRSIGALYLYHNRPAWYQFFTA 146
           QLELGKPLQNRK EKRVNGIFWIILLNIG+YVADHIFQVR+IGALYLYHNRPAWYQFFTA
Sbjct: 2   QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHIFQVRNIGALYLYHNRPAWYQFFTA 61

Query: 147 TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVG 206
           TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGAN+VSWLILPRNAVSVG
Sbjct: 62  TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANVVSWLILPRNAVSVG 121

Query: 207 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGSALQN 266
           ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGG   QN
Sbjct: 122 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGHPSQN 181

Query: 267 VNHVAHLSGALVGVVLVWLLSRIPSQPPDQDASTLHRKVR 307
           VNHVAHLSGALVGV+LVWLLSRIPSQ  DQDAS LHRK R
Sbjct: 182 VNHVAHLSGALVGVLLVWLLSRIPSQSLDQDASALHRKGR 221

[Close]

BLAST of Cp4.1LG02g05020.1 vs. NCBI nr
Match: gi|449437036|ref|XP_004136298.1| (PREDICTED: presenilins-associated rhomboid-like protein, mitochondrial isoform X2 [Cucumis sativus])

HSP 1 Score: 411.8 bits (1057), Expect = 1.1e-111
Identity = 207/220 (94.09%), Postives = 213/220 (96.82%), Query Frame = 1


Query: 87  QLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADHIFQVRSIGALYLYHNRPAWYQFFTA 146
           QLELGKPLQNRK EKRVNGIFWIILLNIG+YVADH+FQVR+IGALYLYH+RPAWYQFFTA
Sbjct: 2   QLELGKPLQNRKTEKRVNGIFWIILLNIGIYVADHVFQVRNIGALYLYHSRPAWYQFFTA 61

Query: 147 TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVG 206
           TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVG
Sbjct: 62  TFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWLSYILTGVGANIVSWLILPRNAVSVG 121

Query: 207 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGGSALQN 266
           ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRG S LQN
Sbjct: 122 ASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVIEKVMEAAQASTALSGSFRGYS-LQN 181

Query: 267 VNHVAHLSGALVGVVLVWLLSRIPSQPPDQDASTLHRKVR 307
           VNHVAHLSGALVGV+LVWLLSR+PSQ  DQDAS LHRK R
Sbjct: 182 VNHVAHLSGALVGVLLVWLLSRVPSQSSDQDASALHRKGR 220

[Close]

BLAST of Cp4.1LG02g05020.1 vs. NCBI nr
Match: gi|703148897|ref|XP_010109463.1| (Putative rhomboid protease ydcA [Morus notabilis])

HSP 1 Score: 396.4 bits (1017), Expect = 4.7e-107
Identity = 189/243 (77.78%), Postives = 214/243 (88.07%), Query Frame = 1


Query: 62  LRLRARSTAAKPIAMCKMNDADLISQLELGKPLQNRKPEKRVNGIFWIILLNIGVYVADH 121
           L  R    AA+P  +CKM+D+D++SQLELGKP + RKP K+V GIFWIILLN+G+Y ADH
Sbjct: 66  LPFRPLFAAARPRTLCKMSDSDIMSQLELGKPEERRKPHKQVTGIFWIILLNLGIYAADH 125

Query: 122 IFQVRSIGALYLYHNRPAWYQFFTATFCHANWNHLSSNLFFLYIFGKLVEEEEGNFALWL 181
           +FQVR+I  LYLYH  P WYQF TATFCHA+W HLSSNLFFLYIFGKLVEEEEGNF LWL
Sbjct: 126 VFQVRAIKDLYLYHGYPEWYQFLTATFCHADWRHLSSNLFFLYIFGKLVEEEEGNFGLWL 185

Query: 182 SYILTGVGANIVSWLILPRNAVSVGASGAVFGLFTISVLVKMSWDWRKILEVLILGQFVI 241
           SYILTGVGAN+VSWLILPRNAVS+GASGAVFGLFTISV VKMSWDWRKILEV ILGQFV+
Sbjct: 186 SYILTGVGANLVSWLILPRNAVSIGASGAVFGLFTISVFVKMSWDWRKILEVFILGQFVV 245

Query: 242 EKVMEAAQASTALSGSFRGGSALQNVNHVAHLSGALVGVVLVWLLSRIPSQPPDQDASTL 301
           E+VMEAAQASTALS  FRG SALQ++NH+AHLSGALVGV LVWL+S++PS+PPDQ+ S L
Sbjct: 246 ERVMEAAQASTALSSGFRGSSALQSINHIAHLSGALVGVFLVWLISKVPSEPPDQEVSKL 305

Query: 302 HRK 305
           HRK
Sbjct: 306 HRK 308

The following BLAST results are available for this feature:

BLAST of Cp4.1LG02g05020.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RBL11_ARATH	8.5e-101	69.09	Rhomboid-like protein 11, chloroplastic OS=Arabidopsis thaliana GN=RBL11 PE=1 SV...	[more]
RBL3_ARATH	1.2e-06	31.17	RHOMBOID-like protein 3 OS=Arabidopsis thaliana GN=RBL3 PE=2 SV=1	[more]
RBL6_ARATH	6.1e-06	31.37	RHOMBOID-like protein 6, mitochondrial OS=Arabidopsis thaliana GN=RBL6 PE=2 SV=1	[more]

BLAST of Cp4.1LG02g05020.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LEK4_CUCSA	1.7e-132	83.17	Rhomboid-like protein OS=Cucumis sativus GN=Csa_3G889110 PE=3 SV=1	[more]
W9SRK1_9ROSA	3.3e-107	77.78	Rhomboid-like protein OS=Morus notabilis GN=L484_001802 PE=3 SV=1	[more]
A0A0A7E7W0_9AQUA	1.4e-105	85.09	Rhomboid-like protein (Fragment) OS=Ilex purpurea PE=2 SV=1	[more]
A0A0A7E841_LONJA	4.0e-105	69.44	Rhomboid-like protein (Fragment) OS=Lonicera japonica PE=2 SV=1	[more]
A0A0A7E6L4_9APIA	3.4e-104	71.48	Rhomboid-like protein OS=Hedera nepalensis PE=2 SV=1	[more]

BLAST of Cp4.1LG02g05020.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G25752.1	4.8e-102	69.09	rhomboid-like protein 11	[more]
AT5G25640.1	3.3e-26	67.06	Rhomboid-related intramembrane serine protease family protein	[more]
AT5G07250.1	6.9e-08	31.17	RHOMBOID-like protein 3	[more]
AT1G12750.1	3.4e-07	31.37	RHOMBOID-like protein 6	[more]
AT2G29050.1	1.7e-06	33.02	RHOMBOID-like 1	[more]

BLAST of Cp4.1LG02g05020.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659132526\|ref\|XP_008466245.1\|	2.6e-134	83.82	PREDICTED: protein rhomboid-like isoform X1 [Cucumis melo]	[more]
gi\|778687331\|ref\|XP_011652547.1\|	2.5e-132	83.17	PREDICTED: uncharacterized protein LOC101215506 isoform X1 [Cucumis sativus]	[more]
gi\|659132528\|ref\|XP_008466246.1\|	4.4e-113	94.55	PREDICTED: protein rhomboid-like isoform X2 [Cucumis melo]	[more]
gi\|449437036\|ref\|XP_004136298.1\|	1.1e-111	94.09	PREDICTED: presenilins-associated rhomboid-like protein, mitochondrial isoform X...	[more]
gi\|703148897\|ref\|XP_010109463.1\|	4.7e-107	77.78	Putative rhomboid protease ydcA [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006508	proteolysis

Vocabulary: **Molecular Function**
Term	Definition
GO:0004252	serine-type endopeptidase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR022764	Peptidase_S54_rhomboid_dom
IPR002610	Peptidase_S54_rhomboid

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0080140	regulation of jasmonic acid metabolic process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009706	chloroplast inner membrane
molecular_function	GO:0004252	serine-type endopeptidase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG02g05020	Cp4.1LG02g05020	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g05020.1	Cp4.1LG02g05020.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g05020.1:five_prime_utr:001	Cp4.1LG02g05020.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g05020.1:cds:007	Cp4.1LG02g05020.1:cds:007	CDS
Cp4.1LG02g05020.1:cds:006	Cp4.1LG02g05020.1:cds:006	CDS
Cp4.1LG02g05020.1:cds:005	Cp4.1LG02g05020.1:cds:005	CDS
Cp4.1LG02g05020.1:cds:004	Cp4.1LG02g05020.1:cds:004	CDS
Cp4.1LG02g05020.1:cds:003	Cp4.1LG02g05020.1:cds:003	CDS
Cp4.1LG02g05020.1:cds:002	Cp4.1LG02g05020.1:cds:002	CDS
Cp4.1LG02g05020.1:cds:001	Cp4.1LG02g05020.1:cds:001	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG02g05020.1:three_prime_utr:001	Cp4.1LG02g05020.1:three_prime_utr:001	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002610	Peptidase S54, rhomboid	PANTHER	PTHR22936	RHOMBOID-RELATED	coord: 50..302 score: 2.9E
IPR022764	Peptidase S54, rhomboid domain	GENE3D	G3DSA:1.20.1540.10		coord: 107..287 score: 2.6
IPR022764	Peptidase S54, rhomboid domain	PFAM	PF01694	Rhomboid	coord: 137..289 score: 1.4
None	No IPR available	PANTHER	PTHR22936:SF32	SUBFAMILY NOT NAMED	coord: 50..302 score: 2.9E
None	No IPR available	unknown	SSF144091	Rhomboid-like	coord: 104..292 score: 1.03