Cp4.1LG01g26240 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g26240
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Cytoplasmic membrane protein
Location	Cp4.1LG01 : 21184779 .. 21187299 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGATAAAAATGGCTACAATTTTGATTAATTTCGCTAAAATTAAATAAGAGTATCTATAAACCAGGGCGGTGCGCAAATAACTGGTTGCCCCCCTAATCTGGTCGCCGGTGGTCCTCCGAAGATTTTTCGCTCTTCTCTGGACTTCCGAGAAGGGGAAGGAATCGTAGTGTCGAAAGAGAGGTTAATATTCTCCCATGATTGCTCGACCAAACATAGTTGAAGAGCAATCCATCACGAAAAAGAATTGACGTTTTTTTTCGCGTTAGATATATAGAGCTTTCCCAGAAATTTCTGTATTCGATTCGTTTTTCTGTTTCGATTGAGGCTCTGAGGCGAAACAAGGATTTCTGAATTTTTTTTTAATTTAGTCGAAGGCGAAGATGGCAACCGTAGGACATACCCGCCCGACCGGTTGGTTTAACCAGAAGATCGTTGATCCCCTCCTCCAAATCCTCCAGAGGTTCTTCCTCCACTGCGCATTTTAACTGTGAAATATTTTATTTCTCATTGAGCAGTGATTTTTTTATATGAATTCGAGGAATTCTGTTCTTCATTTGGTATAATTTGGCTTGGGAATTTCTGAGGATCTGTTATTGCGTGTCATTTTACAGTTCGTCTTTCTTTGGTAGCATATTTTGATTTCAAAATTTTGAATATTGAATGAGAAGCATATCTCTAGGAAGAAACATTAGAACTGCTGGTTTAATTGATTTCAAGATTGTTCCCCCATTTTTCTTTTCATGGATTCTTGGAGTTGTTTTTGCTAATTCTTTCTCAATGAGATAAAATTTCCAAAGTTCTTTTAATTCTCTGATGATAATCCTTGAATACATTACTAAAACTTCTTTTTATCTCTGCTCTTGGTTTTGTTGTTAAAGGGGCGCAGAGCCGAAGCAACTGGCGTTCTCTGCAGCTCTTGGCATAACCCTGGGATTGTTTCCCATATGCGGTATATACACATTTACAATACACAGACTAATCATTTTTGACTGTTTATGTGGATAGTTCTAACTTCCAAGTAAAATTATGTTGAAATAATTCGACATCTTATTTTATGTTTCATTAACACAGGGGTGACTGTTTTTCTATGCGGGCTTGCAATTGCATTTCTTGGATCTCTTTGTCATGCTCCCACAGTGATGCTTGCTAATTTTGTTGCTACTCCTCTAGAATTGAGGTACTTATCGTATGCCTTCCCTAATTTACATTACTAGAATTGCTCATTATTTGTATATGGATGCGTTTCTTGAGTCAGAGTTCTATTGATTTTAATTTTTGCTCTGAAGTCTGGTGGTGCCTTTCTTGCGTTTTGGTGAAGCCCTCTCCGGAAGACCTAGTTTCCCACTTACACCTGATGCCTTGAAGAAAGTTTTTAGTGGCCAAGCTTCACATGAAGTTCTATCGAGTATTGCTCATGTGGTAAAGTTTCTTCTACTTACTAATATCAGTGTTGAGTGTTGTTGGGAGTTCCACATTGACTAATTTGGAGAATGATCATGGGTTTAGTAGTAAGGAATACATCTCCATTGGTATGAGGCCTTTTGGAGAAACAAAAGCAAAACCATGAGAGCTTATACTCAAAGTGAACAATATCATACCATTCTGGAGGGTCGTGATTCCTAAAATGGTATTGGAGTCATGCCCTTATCTTAGCCATGTCAATAGAATTATCAAATGTCGAGTAAAGAATTTGTGAGCTTCGAAGGTGTAGTAAAAAATGACTCAAGTGTCGATCAAAGGGTATAGTTTGTTCAAGGACTCTAGAGAAGGACTCGAGCCTCGATTAAGGGAGGCCGAGGGCTCCATAAGAAGCCTCAAGGGAGGCTCTATAGTGTACTTTGTTTGGGGAGAGGATTGTTAGGAAGGAGTCCCAGGTTGGCTAATTTAGGGAATGATAGTGGGTTTAGAAGTAACCAATACTACGAGGCCTTTTGGAGAAGCCAAAAGTAAAGTCATGAGAGCTTATGCTCAATGTGGACAATATCATACTATTGTGGAGGGTTGTGATTCCTAACCTTTTGTACATTGTTGTTTTGTTGAGTTCCTTGATTCGGATTAGTAAACTGGATTTTTTTTTTTAAATCAATATTGGCAGTTGTTGGGATGGGCTGTTGCTGCGCCCTTGATTCTGGGGATTGGATATTTGTTGTTTTTGCCATGCTTCAAGATTTTAGTTCGCAAGTTCAGCCCTGCAGCTTCACCTTCTGACGTCAAAATGAAGACGAGGGATGACTGATTTAATAAGAGTCCCAGAAATGGCCCATCTCCTCCTCTAAACACTGCCCACTTGCTTTTAACATGGTAACCTTCTTTGTATATATGTATTACCATGGCCTTCAGTTGCTTCTTCGCTTTGTATGAACACAGTTTTGTGGTTCAAAGTTTGATCAAAATATCATAAAAGCTTGCAGGATGCAACTGTGATTGCAAGTCCCTTATTCATTGCGTTGTTGTTTTAGTGAACGTAAATTGTTGTAGCTTATGCCTTCGCCAAATAAAGCTTTGAAATTTCCAAATTCT

mRNA sequence

GAGATAAAAATGGCTACAATTTTGATTAATTTCGCTAAAATTAAATAAGAGTATCTATAAACCAGGGCGGTGCGCAAATAACTGGTTGCCCCCCTAATCTGGTCGCCGGTGGTCCTCCGAAGATTTTTCGCTCTTCTCTGGACTTCCGAGAAGGGGAAGGAATCGTAGTGTCGAAAGAGAGTCGAAGGCGAAGATGGCAACCGTAGGACATACCCGCCCGACCGGTTGGTTTAACCAGAAGATCGTTGATCCCCTCCTCCAAATCCTCCAGAGGGGCGCAGAGCCGAAGCAACTGGCGTTCTCTGCAGCTCTTGGCATAACCCTGGGATTGTTTCCCATATGCGGGGTGACTGTTTTTCTATGCGGGCTTGCAATTGCATTTCTTGGATCTCTTTGTCATGCTCCCACAGTGATGCTTGCTAATTTTGTTGCTACTCCTCTAGAATTGAGTCTGGTGGTGCCTTTCTTGCGTTTTGGTGAAGCCCTCTCCGGAAGACCTAGTTTCCCACTTACACCTGATGCCTTGAAGAAATTGTTGGGATGGGCTGTTGCTGCGCCCTTGATTCTGGGGATTGGATATTTGTTGTTTTTGCCATGCTTCAAGATTTTAGTTCGCAAGTTCAGCCCTGCAGCTTCACCTTCTGACGTCAAAATGAAGACGAGGGATGACTGATTTAATAAGAGTCCCAGAAATGGCCCATCTCCTCCTCTAAACACTGCCCACTTGCTTTTAACATGGTAACCTTCTTTGTATATATGTATTACCATGGCCTTCAGTTGCTTCTTCGCTTTGTATGAACACAGTTTTGTGGTTCAAAGTTTGATCAAAATATCATAAAAGCTTGCAGGATGCAACTGTGATTGCAAGTCCCTTATTCATTGCGTTGTTGTTTTAGTGAACGTAAATTGTTGTAGCTTATGCCTTCGCCAAATAAAGCTTTGAAATTTCCAAATTCT

Coding sequence (CDS)

ATGGCAACCGTAGGACATACCCGCCCGACCGGTTGGTTTAACCAGAAGATCGTTGATCCCCTCCTCCAAATCCTCCAGAGGGGCGCAGAGCCGAAGCAACTGGCGTTCTCTGCAGCTCTTGGCATAACCCTGGGATTGTTTCCCATATGCGGGGTGACTGTTTTTCTATGCGGGCTTGCAATTGCATTTCTTGGATCTCTTTGTCATGCTCCCACAGTGATGCTTGCTAATTTTGTTGCTACTCCTCTAGAATTGAGTCTGGTGGTGCCTTTCTTGCGTTTTGGTGAAGCCCTCTCCGGAAGACCTAGTTTCCCACTTACACCTGATGCCTTGAAGAAATTGTTGGGATGGGCTGTTGCTGCGCCCTTGATTCTGGGGATTGGATATTTGTTGTTTTTGCCATGCTTCAAGATTTTAGTTCGCAAGTTCAGCCCTGCAGCTTCACCTTCTGACGTCAAAATGAAGACGAGGGATGACTGA

Protein sequence

MATVGHTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASPSDVKMKTRDD

Homology

[Close]

BLAST of Cp4.1LG01g26240 vs. TrEMBL
Match: A0A0A0LSU8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401460 PE=4 SV=1)

HSP 1 Score: 264.2 bits (674), Expect = 1.0e-67
Identity = 139/183 (75.96%), Postives = 145/183 (79.23%), Query Frame = 1


Query: 1   MATVGHTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 60
           MATVGH R T WFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCG A
Sbjct: 1   MATVGHARSTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFA 60

Query: 61  IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKK------- 120
           IAFLGSLCHAPTVMLANF+ATP+ELSLVVPFLRFGEA+SG P FP TPDALKK       
Sbjct: 61  IAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGEAS 120

Query: 121 ----------LLGWAVAAPLILGIGYLLFLPCFKILVRKFS--------PAASPSDVKMK 159
                     LLGW VAAP ILGIGYLLFLPCFKILVRKFS        P  S +D+K+K
Sbjct: 121 HEVLLSIAHLLLGWLVAAPFILGIGYLLFLPCFKILVRKFSTVASSPKKPPHSHTDIKLK 180

[Close]

BLAST of Cp4.1LG01g26240 vs. TrEMBL
Match: D7SMX6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0089g00610 PE=4 SV=1)

HSP 1 Score: 221.5 bits (563), Expect = 7.4e-55
Identity = 117/172 (68.02%), Postives = 132/172 (76.74%), Query Frame = 1


Query: 12  WFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSLCHAP 71
           WFN+KIVDPLLQIL+RGAEPKQLAFSAALGITLG+FPICGVTVFLCG+AIA LGSLCH+P
Sbjct: 13  WFNKKIVDPLLQILRRGAEPKQLAFSAALGITLGVFPICGVTVFLCGMAIALLGSLCHSP 72

Query: 72  TVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKK-----------------L 131
           +VMLANF+ATP+ELSLVVPFLRFGE +SG P FPLT DA+KK                 L
Sbjct: 73  SVMLANFIATPIELSLVVPFLRFGEVISGGPHFPLTSDAMKKVLTGHASREVLLSIVHAL 132

Query: 132 LGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASP--------SDVKMKTRD 159
           LGW VAAP IL I Y++FLPC K+LVRKFSP  S          +VK+K RD
Sbjct: 133 LGWLVAAPFILVILYIIFLPCCKLLVRKFSPVPSSPKKPVHPHMEVKLKVRD 184

[Close]

BLAST of Cp4.1LG01g26240 vs. TrEMBL
Match: B9S6X9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1329390 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.6e-52
Identity = 114/172 (66.28%), Postives = 129/172 (75.00%), Query Frame = 1


Query: 12  WFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSLCHAP 71
           WF++KIVDPL QIL RG EPKQLAFSAALGITLG+FPICGVTV LCG+AIA LGSLCHAP
Sbjct: 11  WFSKKIVDPLYQILSRGTEPKQLAFSAALGITLGVFPICGVTVLLCGMAIAMLGSLCHAP 70

Query: 72  TVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKK-----------------L 131
           +VMLANFVATP+ELSLVVPFLRFGE +SG P FPLT DA KK                 L
Sbjct: 71  SVMLANFVATPIELSLVVPFLRFGELISGGPHFPLTSDAFKKVLTGQASHEVLLSILHAL 130

Query: 132 LGWAVAAPLILGIGYLLFLPCFKILVRKF-----SPAASP---SDVKMKTRD 159
           +GW VAAP IL   Y++FLPCFK+LVRKF     SP  SP   ++V++K RD
Sbjct: 131 MGWLVAAPFILAALYIIFLPCFKVLVRKFSSGPGSPIKSPTSFTEVRLKVRD 182

[Close]

BLAST of Cp4.1LG01g26240 vs. TrEMBL
Match: A0A061FJX0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_036068 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 3.5e-52
Identity = 115/174 (66.09%), Postives = 131/174 (75.29%), Query Frame = 1


Query: 10  TGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSLCH 69
           T W + KIVDPLLQIL++GAEPKQLAFSAALGITLG+FPICGVTV LCG+AIA LGSL H
Sbjct: 4   TLWLHNKIVDPLLQILRKGAEPKQLAFSAALGITLGIFPICGVTVLLCGMAIALLGSLSH 63

Query: 70  APTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKK---------------- 129
           +PTVMLANF+ATP+ELSLVVPFLRFGEA++G P FPLT DALKK                
Sbjct: 64  SPTVMLANFIATPIELSLVVPFLRFGEAIAGGPHFPLTSDALKKVLTGHASHEVLLSIAH 123

Query: 130 -LLGWAVAAPLILGIGYLLFLPCFKILVRKFS--------PAASPSDVKMKTRD 159
            LLGW VAAP+IL I Y+LFLP FK+LV KFS        P  S S+V++K RD
Sbjct: 124 ALLGWLVAAPIILAILYILFLPIFKVLVPKFSSVPLSPRKPLHSHSEVRLKVRD 177

[Close]

BLAST of Cp4.1LG01g26240 vs. TrEMBL
Match: B9I870_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s09070g PE=4 SV=2)

HSP 1 Score: 211.8 bits (538), Expect = 5.9e-52
Identity = 114/172 (66.28%), Postives = 127/172 (73.84%), Query Frame = 1


Query: 12  WFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSLCHAP 71
           WFN+ IVDPL QIL+RG EPKQLA S ALGITLG+FPICGVTV LCG+AIA LGSLCHAP
Sbjct: 6   WFNKSIVDPLYQILRRGLEPKQLALSTALGITLGIFPICGVTVLLCGVAIALLGSLCHAP 65

Query: 72  TVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKK-----------------L 131
           TVMLANF+ATPLELSLVVPF+RFGE +SG P FPLT DALKK                 L
Sbjct: 66  TVMLANFIATPLELSLVVPFVRFGEVMSGGPHFPLTSDALKKVFTGQASREVILSVAHAL 125

Query: 132 LGWAVAAPLILGIGYLLFLPCFKILVRKFS-----PAASP---SDVKMKTRD 159
           LGW VAAP IL   Y++FLPCFK+LV KFS     P  SP   ++VK+K RD
Sbjct: 126 LGWLVAAPFILAALYIIFLPCFKVLVHKFSTVPSGPKKSPNSLAEVKLKGRD 177

[Close]

BLAST of Cp4.1LG01g26240 vs. TAIR10
Match: AT1G33490.1 (AT1G33490.1 unknown protein)

HSP 1 Score: 206.8 bits (525), Expect = 9.6e-54
Identity = 106/163 (65.03%), Postives = 124/163 (76.07%), Query Frame = 1


Query: 12  WFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSLCHAP 71
           WF++KI +PL+QIL+RGAEPKQLAFSAALGIT+G+FPICGVTV LCG+AIA LGSLCHAP
Sbjct: 11  WFDKKISEPLIQILRRGAEPKQLAFSAALGITMGVFPICGVTVLLCGVAIASLGSLCHAP 70

Query: 72  TVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKK-----------------L 131
           TVMLANF+ATP+ELSLVVPFLR GE ++G P FPLT DALKK                 L
Sbjct: 71  TVMLANFIATPIELSLVVPFLRLGEKITGGPHFPLTSDALKKVFTGQASRDVFLSIGNAL 130

Query: 132 LGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASPSDVKMKTR 158
           LGW +AAP ++   Y++FLPCFKILVRKFS   S +    K R
Sbjct: 131 LGWLIAAPFVIVALYIMFLPCFKILVRKFSSVDSTAKTPTKER 173

[Close]

BLAST of Cp4.1LG01g26240 vs. TAIR10
Match: AT4G10140.1 (AT4G10140.1 unknown protein)

HSP 1 Score: 191.4 bits (485), Expect = 4.2e-49
Identity = 101/158 (63.92%), Postives = 112/158 (70.89%), Query Frame = 1


Query: 8   RPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSL 67
           R   WFN+KI DPLLQIL+RG EPKQLAFSAALGITLG+FPICGV V LCG+A A LGS 
Sbjct: 7   RLKAWFNKKITDPLLQILRRGTEPKQLAFSAALGITLGIFPICGVPVLLCGVAFALLGSS 66

Query: 68  CHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKK-------------- 127
           CHAPTVMLAN +ATP+EL+LVVPFLR GE ++G P FPLT DALKK              
Sbjct: 67  CHAPTVMLANIIATPVELALVVPFLRLGEKVTGGPHFPLTSDALKKVFTGQASQEVFLSI 126

Query: 128 ---LLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAAS 149
              LLGW VA P      Y++ LPCF ILVRKF   AS
Sbjct: 127 GNALLGWLVATPFFFITLYVVLLPCFTILVRKFGGVAS 164

[Close]

BLAST of Cp4.1LG01g26240 vs. NCBI nr
Match: gi|449441776|ref|XP_004138658.1| (PREDICTED: uncharacterized protein LOC101220662 [Cucumis sativus])

HSP 1 Score: 264.2 bits (674), Expect = 1.4e-67
Identity = 139/183 (75.96%), Postives = 145/183 (79.23%), Query Frame = 1


Query: 1   MATVGHTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 60
           MATVGH R T WFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCG A
Sbjct: 1   MATVGHARSTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFA 60

Query: 61  IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKK------- 120
           IAFLGSLCHAPTVMLANF+ATP+ELSLVVPFLRFGEA+SG P FP TPDALKK       
Sbjct: 61  IAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGEAS 120

Query: 121 ----------LLGWAVAAPLILGIGYLLFLPCFKILVRKFS--------PAASPSDVKMK 159
                     LLGW VAAP ILGIGYLLFLPCFKILVRKFS        P  S +D+K+K
Sbjct: 121 HEVLLSIAHLLLGWLVAAPFILGIGYLLFLPCFKILVRKFSTVASSPKKPPHSHTDIKLK 180

[Close]

BLAST of Cp4.1LG01g26240 vs. NCBI nr
Match: gi|659081186|ref|XP_008441199.1| (PREDICTED: uncharacterized protein LOC103485404 [Cucumis melo])

HSP 1 Score: 264.2 bits (674), Expect = 1.4e-67
Identity = 138/183 (75.41%), Postives = 146/183 (79.78%), Query Frame = 1


Query: 1   MATVGHTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 60
           MATVGH RPT WF+QKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCG A
Sbjct: 1   MATVGHARPTSWFSQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFA 60

Query: 61  IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKK------- 120
           IAFLGSLCHAPTVMLANF+ATP+ELSLVVPFLRFGEA+SG P FP TPDALKK       
Sbjct: 61  IAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGEAS 120

Query: 121 ----------LLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASP--------SDVKMK 159
                     LLGW VAAP ILGIGYLLFLPCFKILVRKFS  AS         +D+++K
Sbjct: 121 HEVLLSIAHLLLGWLVAAPFILGIGYLLFLPCFKILVRKFSTVASSPKKSPHSHTDIRLK 180

[Close]

BLAST of Cp4.1LG01g26240 vs. NCBI nr
Match: gi|225459985|ref|XP_002269541.1| (PREDICTED: uncharacterized protein LOC100248177 [Vitis vinifera])

HSP 1 Score: 221.5 bits (563), Expect = 1.1e-54
Identity = 117/172 (68.02%), Postives = 132/172 (76.74%), Query Frame = 1


Query: 12  WFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSLCHAP 71
           WFN+KIVDPLLQIL+RGAEPKQLAFSAALGITLG+FPICGVTVFLCG+AIA LGSLCH+P
Sbjct: 13  WFNKKIVDPLLQILRRGAEPKQLAFSAALGITLGVFPICGVTVFLCGMAIALLGSLCHSP 72

Query: 72  TVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKK-----------------L 131
           +VMLANF+ATP+ELSLVVPFLRFGE +SG P FPLT DA+KK                 L
Sbjct: 73  SVMLANFIATPIELSLVVPFLRFGEVISGGPHFPLTSDAMKKVLTGHASREVLLSIVHAL 132

Query: 132 LGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASP--------SDVKMKTRD 159
           LGW VAAP IL I Y++FLPC K+LVRKFSP  S          +VK+K RD
Sbjct: 133 LGWLVAAPFILVILYIIFLPCCKLLVRKFSPVPSSPKKPVHPHMEVKLKVRD 184

[Close]

BLAST of Cp4.1LG01g26240 vs. NCBI nr
Match: gi|719988605|ref|XP_010252390.1| (PREDICTED: uncharacterized protein LOC104593964 [Nelumbo nucifera])

HSP 1 Score: 214.2 bits (544), Expect = 1.7e-52
Identity = 114/172 (66.28%), Postives = 129/172 (75.00%), Query Frame = 1


Query: 12  WFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSLCHAP 71
           WFN+K+VDPL+QIL+RGAEPKQLAFS ALG+TLG+FPICGVTVFLCG+AI  LGSLCHAP
Sbjct: 8   WFNKKVVDPLVQILRRGAEPKQLAFSVALGLTLGVFPICGVTVFLCGMAITLLGSLCHAP 67

Query: 72  TVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKK-----------------L 131
           +VMLANFVATP+ELSLVVPFLRFGE +SG P FPLT DALKK                 L
Sbjct: 68  SVMLANFVATPIELSLVVPFLRFGEVISGGPHFPLTSDALKKVLTGHASQDVLLSIVHAL 127

Query: 132 LGWAVAAPLILGIGYLLFLPCFKILVRKFS--------PAASPSDVKMKTRD 159
           LGW VAAP IL I Y++FLP FK LV KFS        P  S +DV++K RD
Sbjct: 128 LGWLVAAPFILTILYVIFLPIFKYLVPKFSTLPSSPNKPLISHTDVRLKVRD 179

[Close]

BLAST of Cp4.1LG01g26240 vs. NCBI nr
Match: gi|223538961|gb|EEF40558.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 213.8 bits (543), Expect = 2.2e-52
Identity = 114/172 (66.28%), Postives = 129/172 (75.00%), Query Frame = 1


Query: 12  WFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSLCHAP 71
           WF++KIVDPL QIL RG EPKQLAFSAALGITLG+FPICGVTV LCG+AIA LGSLCHAP
Sbjct: 11  WFSKKIVDPLYQILSRGTEPKQLAFSAALGITLGVFPICGVTVLLCGMAIAMLGSLCHAP 70

Query: 72  TVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKK-----------------L 131
           +VMLANFVATP+ELSLVVPFLRFGE +SG P FPLT DA KK                 L
Sbjct: 71  SVMLANFVATPIELSLVVPFLRFGELISGGPHFPLTSDAFKKVLTGQASHEVLLSILHAL 130

Query: 132 LGWAVAAPLILGIGYLLFLPCFKILVRKF-----SPAASP---SDVKMKTRD 159
           +GW VAAP IL   Y++FLPCFK+LVRKF     SP  SP   ++V++K RD
Sbjct: 131 MGWLVAAPFILAALYIIFLPCFKVLVRKFSSGPGSPIKSPTSFTEVRLKVRD 182

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g26240 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g26240 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSU8_CUCSA	1.0e-67	75.96	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401460 PE=4 SV=1	[more]
D7SMX6_VITVI	7.4e-55	68.02	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0089g00610 PE=4 SV=...	[more]
B9S6X9_RICCO	1.6e-52	66.28	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1329390 PE=4 SV=1	[more]
A0A061FJX0_THECC	3.5e-52	66.09	Uncharacterized protein OS=Theobroma cacao GN=TCM_036068 PE=4 SV=1	[more]
B9I870_POPTR	5.9e-52	66.28	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s09070g PE=4 SV=2	[more]

BLAST of Cp4.1LG01g26240 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G33490.1	9.6e-54	65.03	unknown protein	[more]
AT4G10140.1	4.2e-49	63.92	unknown protein	[more]

BLAST of Cp4.1LG01g26240 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441776\|ref\|XP_004138658.1\|	1.4e-67	75.96	PREDICTED: uncharacterized protein LOC101220662 [Cucumis sativus]	[more]
gi\|659081186\|ref\|XP_008441199.1\|	1.4e-67	75.41	PREDICTED: uncharacterized protein LOC103485404 [Cucumis melo]	[more]
gi\|225459985\|ref\|XP_002269541.1\|	1.1e-54	68.02	PREDICTED: uncharacterized protein LOC100248177 [Vitis vinifera]	[more]
gi\|719988605\|ref\|XP_010252390.1\|	1.7e-52	66.28	PREDICTED: uncharacterized protein LOC104593964 [Nelumbo nucifera]	[more]
gi\|223538961\|gb\|EEF40558.1\|	2.2e-52	66.28	conserved hypothetical protein [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018639	DUF2062

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g26240.1	Cp4.1LG01g26240.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018639	Domain of unknown function DUF2062	PFAM	PF09835	DUF2062	coord: 21..142 score: 4.
None	No IPR available	PANTHER	PTHR35102	FAMILY NOT NAMED	coord: 2..159 score: 3.3
None	No IPR available	PANTHER	PTHR35102:SF1	SUBFAMILY NOT NAMED	coord: 2..159 score: 3.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g26240	Cucsa.088470	Cucumber (Gy14) v1	cgycpeB0164
Cp4.1LG01g26240	CmaCh15G000250	Cucurbita maxima (Rimu)	cmacpeB317
Cp4.1LG01g26240	CmaCh04G030170	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g26240	CmoCh04G031380	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g26240	CmoCh15G000250	Cucurbita moschata (Rifu)	cmocpeB279
Cp4.1LG01g26240	Cla011921	Watermelon (97103) v1	cpewmB454
Cp4.1LG01g26240	Csa2G401460	Cucumber (Chinese Long) v2	cpecuB386
Cp4.1LG01g26240	MELO3C008103	Melon (DHL92) v3.5.1	cpemeB400
Cp4.1LG01g26240	ClCG11G008280	Watermelon (Charleston Gray)	cpewcgB356
Cp4.1LG01g26240	CSPI02G24810	Wild cucumber (PI 183967)	cpecpiB385
Cp4.1LG01g26240	Lsi03G004680	Bottle gourd (USVL1VR-Ls)	cpelsiB339
Cp4.1LG01g26240	MELO3C008103.2	Melon (DHL92) v3.6.1	cpemedB465
Cp4.1LG01g26240	CsaV3_2G033320	Cucumber (Chinese Long) v3	cpecucB0482
Cp4.1LG01g26240	Bhi04G002067	Wax gourd	cpewgoB0525
Cp4.1LG01g26240	CsGy2G024540	Cucumber (Gy14) v2	cgybcpeB214
Cp4.1LG01g26240	Carg22870	Silver-seed gourd	carcpeB1509
Cp4.1LG01g26240	Carg06089	Silver-seed gourd	carcpeB0034

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g26240	Cucurbita pepo (Zucchini)	cpecpeB199