CmoCh04G031380 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G031380
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Cytoplasmic membrane protein
Location	Cmo_Chr04 : 21742238 .. 21744960 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAACCAGGGCGGTATGCAAATAACTGGTTGCCCCCTAATCTGGTCGCCGGTGGTCCTCCGAAGAATTTTCGCTCTCCTCTGGACTTCCGAGAAGGGGAAGGAATCGTAGTGTCGAAAGAGAGGTTAATATTCTCTCATGATTGCTCGACCAAACATAGTTGAAAGGCAATCCATCACGAAAAAGAATTGACGTTTTTTTTCCCGTTAGATATATAGAGCTTTCCCAGAAATTTCTGTATTCGATTCGATTTTCTGTTTCGATTGAGGCTCTGAGGCGAAACAAGGATTTCTGAAAAGTTTTTAATTTAGTCGAAGGCGAAGATGGCAACCGTAGGACATACCCGCCCGACCGGTTGGTTTAACCAGAAGATCGTCGATCCCCTCCTCCAAATCCTCCAGAGGTTCTTCCTCCACTGCGCATTTGAACTGTGAAATATTTTATTTCTCATTGAGCAGTGATTTTTTTATATGAATTCGAGGAATTCTGTTCTTCATTTGGATTAATTTGGCTTGGGAATTTCTGAGGATCTGTTATTGCGTGTCATTTTACAGTTCGTCTTTCTTTGGTAGCATATTTTGATTTCAAGATTTTGAATATTGAATGGGAAGCATATCTCTAGGAAGAAACATTAGAACTGCTGGTTTAATTGATTTCAAGATTGTTCCCCCATTTTTCTTTTCATGTATTCTTGGAGTTGTTTTTGCTAATTCTTTCTCAATGAGACAAAATTTCCAAAGTTCTTTTAATTCTCTTATGATAATCCTTGAATACATTACTAAAACTTCTTTTTATCTCTGTTCTTGGTTTTGTTGTTAAAGGGGCGCAGAGCCGAAGCAACTGGCATTCTCTGCAGCTCTTGGCATAACCCTGGGATTGTTTCCCATATGCGGTATATACACATTTACAATACACAGACTAATCATTTTTGACTGTTTATGTGGATAGTTCTAACTTCCAAGTAAAATTATGTTGAAATAATTCGACATCTTATTTTATGTTTCATTAACACAGGGGTGACTGTTTTTCTATGCGGGCTTGCAATTGCATTTCTTGGATCTCTTTGTCATGCTCCCACAGTGATGCTTGCTAATTTTGTTGCTACTCCTCTAGAATTGAGGTACTTATCGTATGCCTTCCCTAATTTACATTACTAGAATTGCTCATTATTTGTATATGGATGCGTTTCTTGAGTCAGAGTTCTATTGATTTTAATTTTTGCTCTGAAGTCTGGTGGTGCCTTTCTTGCGTTTTGGTGAAGCCCTCTCCGGTAGACCTAGTTTCCCACTTACACCTGATGCCTTGAAGAAAGTTTTTAGTGGCCAAGCTTCACATGAAGTTCTATCGAGTATTGCTCATGTGGTAAAGTTTCTTCTACTTGCTAATATCAGTGTTGATGTTTTGAATGTTGATGGGAGTATTGGCTCATTTAGGGAATGATCATGGGTTTAGAAGTAAGGAATACATCTCCATTGGTATGAGGTTTTTTGGGGAAACAAAAGCAAAACCATGAGAGCTTATACTCAAAGTGAACAATATCATACCATTGTGCAGGGTCTAAAATGGTATTTGAGTCATGCCCTTATCTTAGCCATGTCAATAGAATTCTCAAATGTCGAGCAAGGAATTTGTGAGCCTCGAAGGTGTAGTAAAAAATGATTCAAGTGTCGATCAAAGGGTGTACTTTGTTCAAGGACTTTAGAGAAGGAGTCGAGCCTCGATTAAGGGAGGCCGTTCGAGGGCTCCATAAGAAGCCCCAAGGGAGGCTTTATAGTGTACTTTGTTTGAGGAGAGGATCATTAGGAAGGAGTCACACGTTGGCTAATTTAGGAAATGATCATGGGTTTAGAAGTAACAATGATCATGGGTTTAGAAGTAACAATGATCATGGGTTTAGAAGTAACAATGATCATGGGTTTAGAAGTAACAATGATCATGGGTTTAGAAGTAACAATGGGTTTAGAAGTAACAATGATCATGGGTTTAGAAGTAACAATGATCATGGGTTTAGAAGTAACCAATACATCTCCATTGGTGAGAGGCCTTTTGGAGAAACTAAAGTAAAGCCATTAGAGCTTATGCTCAAAGTGGACAATATCATACTTTTGTGGAGGGTTGTGATTCTTAACCTTTTGTACATGGTTGTTTTGTTGAGGAGCTTTTGCTCAATGTGGACAATATCATACTATTGTGGAGGGTTGTGATTCCTAACCTTTTGTACATTGTTGTTTTGTTGAGTTGCTTGATTCGGATGAGTAAACTGGATTATTTTTTTAAAAATCAATATTGGCAGTTGTTGGGATGGGCTGTTGCTGCGCCCTTGATTCTGGGGATTGGATATTTGTTGTTTTTGCCATGCTTCAAGATTTTAGTTCGCAAGTTCAGCCCTGCAGCTTCACCTCATTCACAATCTGACGTCAAAATGAAGACGAGGGATGACTGATTTAATAAGAATCCCAGAAATGGCGCATCTCCTCCTCTAAACACTGCCCACTTGCTTTTAACATGGTAACCTTCTTTGTATATATGTATTACCATGGCCTTCAGTTGCTTCTTCGCTTTGTATGAACACAGTTTTGTGGATCAAAGTTTGATCAAAATATCATGAAAGCTTGCAGGATGCAACTGTGATTGCAAGTCCCTTATTCATTGCGTTGTTGTTTTAGTGAACGTAAATTGTTGTAGCTTATGCCTTCGCCAAATAAAGCTTTGAAATTTCCAAA

mRNA sequence

ATAAACCAGGGCGGTATGCAAATAACTGGTTGCCCCCTAATCTGGTCGCCGGTGGTCCTCCGAAGAATTTTCGCTCTCCTCTGGACTTCCGAGAAGGGGAAGGAATCGTAGTGTCGAAAGAGAGGTTAATATTCTCTCATGATTGCTCGACCAAACATAGTTGAAAGGCAATCCATCACGAAAAAGAATTGACGTTTTTTTTCCCGTTAGATATATAGAGCTTTCCCAGAAATTTCTGTATTCGATTCGATTTTCTGTTTCGATTGAGGCTCTGAGGCGAAACAAGGATTTCTGAAAAGTTTTTAATTTAGTCGAAGGCGAAGATGGCAACCGTAGGACATACCCGCCCGACCGGTTGGTTTAACCAGAAGATCGTCGATCCCCTCCTCCAAATCCTCCAGAGGGGCGCAGAGCCGAAGCAACTGGCATTCTCTGCAGCTCTTGGCATAACCCTGGGATTGTTTCCCATATGCGGGGTGACTGTTTTTCTATGCGGGCTTGCAATTGCATTTCTTGGATCTCTTTGTCATGCTCCCACAGTGATGCTTGCTAATTTTGTTGCTACTCCTCTAGAATTGAGTCTGGTGGTGCCTTTCTTGCGTTTTGGTGAAGCCCTCTCCGGTAGACCTAGTTTCCCACTTACACCTGATGCCTTGAAGAAAGTTTTTAGTGGCCAAGCTTCACATGAAGTTCTATCGAGTATTGCTCATGTGTTGTTGGGATGGGCTGTTGCTGCGCCCTTGATTCTGGGGATTGGATATTTGTTGTTTTTGCCATGCTTCAAGATTTTAGTTCGCAAGTTCAGCCCTGCAGCTTCACCTCATTCACAATCTGACGTCAAAATGAAGACGAGGGATGACTGATTTAATAAGAATCCCAGAAATGGCGCATCTCCTCCTCTAAACACTGCCCACTTGCTTTTAACATGGTAACCTTCTTTGTATATATGTATTACCATGGCCTTCAGTTGCTTCTTCGCTTTGTATGAACACAGTTTTGTGGATCAAAGTTTGATCAAAATATCATGAAAGCTTGCAGGATGCAACTGTGATTGCAAGTCCCTTATTCATTGCGTTGTTGTTTTAGTGAACGTAAATTGTTGTAGCTTATGCCTTCGCCAAATAAAGCTTTGAAATTTCCAAA

Coding sequence (CDS)

ATGGCAACCGTAGGACATACCCGCCCGACCGGTTGGTTTAACCAGAAGATCGTCGATCCCCTCCTCCAAATCCTCCAGAGGGGCGCAGAGCCGAAGCAACTGGCATTCTCTGCAGCTCTTGGCATAACCCTGGGATTGTTTCCCATATGCGGGGTGACTGTTTTTCTATGCGGGCTTGCAATTGCATTTCTTGGATCTCTTTGTCATGCTCCCACAGTGATGCTTGCTAATTTTGTTGCTACTCCTCTAGAATTGAGTCTGGTGGTGCCTTTCTTGCGTTTTGGTGAAGCCCTCTCCGGTAGACCTAGTTTCCCACTTACACCTGATGCCTTGAAGAAAGTTTTTAGTGGCCAAGCTTCACATGAAGTTCTATCGAGTATTGCTCATGTGTTGTTGGGATGGGCTGTTGCTGCGCCCTTGATTCTGGGGATTGGATATTTGTTGTTTTTGCCATGCTTCAAGATTTTAGTTCGCAAGTTCAGCCCTGCAGCTTCACCTCATTCACAATCTGACGTCAAAATGAAGACGAGGGATGACTGA

Homology

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BLAST of CmoCh04G031380 vs. TrEMBL
Match: A0A0A0LSU8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401460 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 6.8e-81
Identity = 155/183 (84.70%), Postives = 164/183 (89.62%), Query Frame = 1


Query: 1   MATVGHTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 60
           MATVGH R T WFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCG A
Sbjct: 1   MATVGHARSTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFA 60

Query: 61  IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS 120
           IAFLGSLCHAPTVMLANF+ATP+ELSLVVPFLRFGEA+SG P FP TPDALKKVF+G+AS
Sbjct: 61  IAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGEAS 120

Query: 121 HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAAS-----PHSQSDVKMK 179
           HEVL SIAH+LLGW VAAP ILGIGYLLFLPCFKILVRKFS  AS     PHS +D+K+K
Sbjct: 121 HEVLLSIAHLLLGWLVAAPFILGIGYLLFLPCFKILVRKFSTVASSPKKPPHSHTDIKLK 180

[Close]

BLAST of CmoCh04G031380 vs. TrEMBL
Match: D7SMX6_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0089g00610 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 4.4e-64
Identity = 128/172 (74.42%), Postives = 144/172 (83.72%), Query Frame = 1


Query: 12  WFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSLCHAP 71
           WFN+KIVDPLLQIL+RGAEPKQLAFSAALGITLG+FPICGVTVFLCG+AIA LGSLCH+P
Sbjct: 13  WFNKKIVDPLLQILRRGAEPKQLAFSAALGITLGVFPICGVTVFLCGMAIALLGSLCHSP 72

Query: 72  TVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQASHEVLSSIAHVL 131
           +VMLANF+ATP+ELSLVVPFLRFGE +SG P FPLT DA+KKV +G AS EVL SI H L
Sbjct: 73  SVMLANFIATPIELSLVVPFLRFGEVISGGPHFPLTSDAMKKVLTGHASREVLLSIVHAL 132

Query: 132 LGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASP-----HSQSDVKMKTRD 179
           LGW VAAP IL I Y++FLPC K+LVRKFSP  S      H   +VK+K RD
Sbjct: 133 LGWLVAAPFILVILYIIFLPCCKLLVRKFSPVPSSPKKPVHPHMEVKLKVRD 184

[Close]

BLAST of CmoCh04G031380 vs. TrEMBL
Match: B9S6X9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1329390 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 1.7e-63
Identity = 127/172 (73.84%), Postives = 143/172 (83.14%), Query Frame = 1


Query: 12  WFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSLCHAP 71
           WF++KIVDPL QIL RG EPKQLAFSAALGITLG+FPICGVTV LCG+AIA LGSLCHAP
Sbjct: 11  WFSKKIVDPLYQILSRGTEPKQLAFSAALGITLGVFPICGVTVLLCGMAIAMLGSLCHAP 70

Query: 72  TVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQASHEVLSSIAHVL 131
           +VMLANFVATP+ELSLVVPFLRFGE +SG P FPLT DA KKV +GQASHEVL SI H L
Sbjct: 71  SVMLANFVATPIELSLVVPFLRFGELISGGPHFPLTSDAFKKVLTGQASHEVLLSILHAL 130

Query: 132 LGWAVAAPLILGIGYLLFLPCFKILVRKF-----SPAASPHSQSDVKMKTRD 179
           +GW VAAP IL   Y++FLPCFK+LVRKF     SP  SP S ++V++K RD
Sbjct: 131 MGWLVAAPFILAALYIIFLPCFKVLVRKFSSGPGSPIKSPTSFTEVRLKVRD 182

[Close]

BLAST of CmoCh04G031380 vs. TrEMBL
Match: B9I870_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s09070g PE=4 SV=2)

HSP 1 Score: 250.0 bits (637), Expect = 2.2e-63
Identity = 126/172 (73.26%), Postives = 143/172 (83.14%), Query Frame = 1


Query: 12  WFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSLCHAP 71
           WFN+ IVDPL QIL+RG EPKQLA S ALGITLG+FPICGVTV LCG+AIA LGSLCHAP
Sbjct: 6   WFNKSIVDPLYQILRRGLEPKQLALSTALGITLGIFPICGVTVLLCGVAIALLGSLCHAP 65

Query: 72  TVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQASHEVLSSIAHVL 131
           TVMLANF+ATPLELSLVVPF+RFGE +SG P FPLT DALKKVF+GQAS EV+ S+AH L
Sbjct: 66  TVMLANFIATPLELSLVVPFVRFGEVMSGGPHFPLTSDALKKVFTGQASREVILSVAHAL 125

Query: 132 LGWAVAAPLILGIGYLLFLPCFKILVRKFS-----PAASPHSQSDVKMKTRD 179
           LGW VAAP IL   Y++FLPCFK+LV KFS     P  SP+S ++VK+K RD
Sbjct: 126 LGWLVAAPFILAALYIIFLPCFKVLVHKFSTVPSGPKKSPNSLAEVKLKGRD 177

[Close]

BLAST of CmoCh04G031380 vs. TrEMBL
Match: A0A061FJX0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_036068 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 8.4e-63
Identity = 128/174 (73.56%), Postives = 145/174 (83.33%), Query Frame = 1


Query: 10  TGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSLCH 69
           T W + KIVDPLLQIL++GAEPKQLAFSAALGITLG+FPICGVTV LCG+AIA LGSL H
Sbjct: 4   TLWLHNKIVDPLLQILRKGAEPKQLAFSAALGITLGIFPICGVTVLLCGMAIALLGSLSH 63

Query: 70  APTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQASHEVLSSIAH 129
           +PTVMLANF+ATP+ELSLVVPFLRFGEA++G P FPLT DALKKV +G ASHEVL SIAH
Sbjct: 64  SPTVMLANFIATPIELSLVVPFLRFGEAIAGGPHFPLTSDALKKVLTGHASHEVLLSIAH 123

Query: 130 VLLGWAVAAPLILGIGYLLFLPCFKILVRKF-----SPAASPHSQSDVKMKTRD 179
            LLGW VAAP+IL I Y+LFLP FK+LV KF     SP    HS S+V++K RD
Sbjct: 124 ALLGWLVAAPIILAILYILFLPIFKVLVPKFSSVPLSPRKPLHSHSEVRLKVRD 177

[Close]

BLAST of CmoCh04G031380 vs. TAIR10
Match: AT1G33490.1 (AT1G33490.1 unknown protein)

HSP 1 Score: 230.3 bits (586), Expect = 9.1e-61
Identity = 113/154 (73.38%), Postives = 133/154 (86.36%), Query Frame = 1


Query: 12  WFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSLCHAP 71
           WF++KI +PL+QIL+RGAEPKQLAFSAALGIT+G+FPICGVTV LCG+AIA LGSLCHAP
Sbjct: 11  WFDKKISEPLIQILRRGAEPKQLAFSAALGITMGVFPICGVTVLLCGVAIASLGSLCHAP 70

Query: 72  TVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQASHEVLSSIAHVL 131
           TVMLANF+ATP+ELSLVVPFLR GE ++G P FPLT DALKKVF+GQAS +V  SI + L
Sbjct: 71  TVMLANFIATPIELSLVVPFLRLGEKITGGPHFPLTSDALKKVFTGQASRDVFLSIGNAL 130

Query: 132 LGWAVAAPLILGIGYLLFLPCFKILVRKFSPAAS 166
           LGW +AAP ++   Y++FLPCFKILVRKFS   S
Sbjct: 131 LGWLIAAPFVIVALYIMFLPCFKILVRKFSSVDS 164

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BLAST of CmoCh04G031380 vs. TAIR10
Match: AT4G10140.1 (AT4G10140.1 unknown protein)

HSP 1 Score: 219.2 bits (557), Expect = 2.1e-57
Identity = 114/176 (64.77%), Postives = 131/176 (74.43%), Query Frame = 1


Query: 8   RPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSL 67
           R   WFN+KI DPLLQIL+RG EPKQLAFSAALGITLG+FPICGV V LCG+A A LGS 
Sbjct: 7   RLKAWFNKKITDPLLQILRRGTEPKQLAFSAALGITLGIFPICGVPVLLCGVAFALLGSS 66

Query: 68  CHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQASHEVLSSI 127
           CHAPTVMLAN +ATP+EL+LVVPFLR GE ++G P FPLT DALKKVF+GQAS EV  SI
Sbjct: 67  CHAPTVMLANIIATPVELALVVPFLRLGEKVTGGPHFPLTSDALKKVFTGQASQEVFLSI 126

Query: 128 AHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASPHS-----QSDVKMKTRD 179
            + LLGW VA P      Y++ LPCF ILVRKF   AS        ++++  K RD
Sbjct: 127 GNALLGWLVATPFFFITLYVVLLPCFTILVRKFGGVASTQKLPTSMETELNPKPRD 182

[Close]

BLAST of CmoCh04G031380 vs. NCBI nr
Match: gi|659081186|ref|XP_008441199.1| (PREDICTED: uncharacterized protein LOC103485404 [Cucumis melo])

HSP 1 Score: 308.9 bits (790), Expect = 5.7e-81
Identity = 154/183 (84.15%), Postives = 165/183 (90.16%), Query Frame = 1


Query: 1   MATVGHTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 60
           MATVGH RPT WF+QKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCG A
Sbjct: 1   MATVGHARPTSWFSQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFA 60

Query: 61  IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS 120
           IAFLGSLCHAPTVMLANF+ATP+ELSLVVPFLRFGEA+SG P FP TPDALKKVF+G+AS
Sbjct: 61  IAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGEAS 120

Query: 121 HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKF-----SPAASPHSQSDVKMK 179
           HEVL SIAH+LLGW VAAP ILGIGYLLFLPCFKILVRKF     SP  SPHS +D+++K
Sbjct: 121 HEVLLSIAHLLLGWLVAAPFILGIGYLLFLPCFKILVRKFSTVASSPKKSPHSHTDIRLK 180

[Close]

BLAST of CmoCh04G031380 vs. NCBI nr
Match: gi|449441776|ref|XP_004138658.1| (PREDICTED: uncharacterized protein LOC101220662 [Cucumis sativus])

HSP 1 Score: 308.1 bits (788), Expect = 9.8e-81
Identity = 155/183 (84.70%), Postives = 164/183 (89.62%), Query Frame = 1


Query: 1   MATVGHTRPTGWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLA 60
           MATVGH R T WFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCG A
Sbjct: 1   MATVGHARSTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFA 60

Query: 61  IAFLGSLCHAPTVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQAS 120
           IAFLGSLCHAPTVMLANF+ATP+ELSLVVPFLRFGEA+SG P FP TPDALKKVF+G+AS
Sbjct: 61  IAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGEAS 120

Query: 121 HEVLSSIAHVLLGWAVAAPLILGIGYLLFLPCFKILVRKFSPAAS-----PHSQSDVKMK 179
           HEVL SIAH+LLGW VAAP ILGIGYLLFLPCFKILVRKFS  AS     PHS +D+K+K
Sbjct: 121 HEVLLSIAHLLLGWLVAAPFILGIGYLLFLPCFKILVRKFSTVASSPKKPPHSHTDIKLK 180

[Close]

BLAST of CmoCh04G031380 vs. NCBI nr
Match: gi|225459985|ref|XP_002269541.1| (PREDICTED: uncharacterized protein LOC100248177 [Vitis vinifera])

HSP 1 Score: 252.3 bits (643), Expect = 6.4e-64
Identity = 128/172 (74.42%), Postives = 144/172 (83.72%), Query Frame = 1


Query: 12  WFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSLCHAP 71
           WFN+KIVDPLLQIL+RGAEPKQLAFSAALGITLG+FPICGVTVFLCG+AIA LGSLCH+P
Sbjct: 13  WFNKKIVDPLLQILRRGAEPKQLAFSAALGITLGVFPICGVTVFLCGMAIALLGSLCHSP 72

Query: 72  TVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQASHEVLSSIAHVL 131
           +VMLANF+ATP+ELSLVVPFLRFGE +SG P FPLT DA+KKV +G AS EVL SI H L
Sbjct: 73  SVMLANFIATPIELSLVVPFLRFGEVISGGPHFPLTSDAMKKVLTGHASREVLLSIVHAL 132

Query: 132 LGWAVAAPLILGIGYLLFLPCFKILVRKFSPAASP-----HSQSDVKMKTRD 179
           LGW VAAP IL I Y++FLPC K+LVRKFSP  S      H   +VK+K RD
Sbjct: 133 LGWLVAAPFILVILYIIFLPCCKLLVRKFSPVPSSPKKPVHPHMEVKLKVRD 184

[Close]

BLAST of CmoCh04G031380 vs. NCBI nr
Match: gi|223538961|gb|EEF40558.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 250.4 bits (638), Expect = 2.4e-63
Identity = 127/172 (73.84%), Postives = 143/172 (83.14%), Query Frame = 1


Query: 12  WFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSLCHAP 71
           WF++KIVDPL QIL RG EPKQLAFSAALGITLG+FPICGVTV LCG+AIA LGSLCHAP
Sbjct: 11  WFSKKIVDPLYQILSRGTEPKQLAFSAALGITLGVFPICGVTVLLCGMAIAMLGSLCHAP 70

Query: 72  TVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQASHEVLSSIAHVL 131
           +VMLANFVATP+ELSLVVPFLRFGE +SG P FPLT DA KKV +GQASHEVL SI H L
Sbjct: 71  SVMLANFVATPIELSLVVPFLRFGELISGGPHFPLTSDAFKKVLTGQASHEVLLSILHAL 130

Query: 132 LGWAVAAPLILGIGYLLFLPCFKILVRKF-----SPAASPHSQSDVKMKTRD 179
           +GW VAAP IL   Y++FLPCFK+LVRKF     SP  SP S ++V++K RD
Sbjct: 131 MGWLVAAPFILAALYIIFLPCFKVLVRKFSSGPGSPIKSPTSFTEVRLKVRD 182

[Close]

BLAST of CmoCh04G031380 vs. NCBI nr
Match: gi|566200259|ref|XP_002319322.2| (hypothetical protein POPTR_0013s09070g [Populus trichocarpa])

HSP 1 Score: 250.0 bits (637), Expect = 3.2e-63
Identity = 126/172 (73.26%), Postives = 143/172 (83.14%), Query Frame = 1


Query: 12  WFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGLAIAFLGSLCHAP 71
           WFN+ IVDPL QIL+RG EPKQLA S ALGITLG+FPICGVTV LCG+AIA LGSLCHAP
Sbjct: 6   WFNKSIVDPLYQILRRGLEPKQLALSTALGITLGIFPICGVTVLLCGVAIALLGSLCHAP 65

Query: 72  TVMLANFVATPLELSLVVPFLRFGEALSGRPSFPLTPDALKKVFSGQASHEVLSSIAHVL 131
           TVMLANF+ATPLELSLVVPF+RFGE +SG P FPLT DALKKVF+GQAS EV+ S+AH L
Sbjct: 66  TVMLANFIATPLELSLVVPFVRFGEVMSGGPHFPLTSDALKKVFTGQASREVILSVAHAL 125

Query: 132 LGWAVAAPLILGIGYLLFLPCFKILVRKFS-----PAASPHSQSDVKMKTRD 179
           LGW VAAP IL   Y++FLPCFK+LV KFS     P  SP+S ++VK+K RD
Sbjct: 126 LGWLVAAPFILAALYIIFLPCFKVLVHKFSTVPSGPKKSPNSLAEVKLKGRD 177

The following BLAST results are available for this feature:

BLAST of CmoCh04G031380 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh04G031380 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSU8_CUCSA	6.8e-81	84.70	Uncharacterized protein OS=Cucumis sativus GN=Csa_2G401460 PE=4 SV=1	[more]
D7SMX6_VITVI	4.4e-64	74.42	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0089g00610 PE=4 SV=...	[more]
B9S6X9_RICCO	1.7e-63	73.84	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1329390 PE=4 SV=1	[more]
B9I870_POPTR	2.2e-63	73.26	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s09070g PE=4 SV=2	[more]
A0A061FJX0_THECC	8.4e-63	73.56	Uncharacterized protein OS=Theobroma cacao GN=TCM_036068 PE=4 SV=1	[more]

BLAST of CmoCh04G031380 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G33490.1	9.1e-61	73.38	unknown protein	[more]
AT4G10140.1	2.1e-57	64.77	unknown protein	[more]

BLAST of CmoCh04G031380 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659081186\|ref\|XP_008441199.1\|	5.7e-81	84.15	PREDICTED: uncharacterized protein LOC103485404 [Cucumis melo]	[more]
gi\|449441776\|ref\|XP_004138658.1\|	9.8e-81	84.70	PREDICTED: uncharacterized protein LOC101220662 [Cucumis sativus]	[more]
gi\|225459985\|ref\|XP_002269541.1\|	6.4e-64	74.42	PREDICTED: uncharacterized protein LOC100248177 [Vitis vinifera]	[more]
gi\|223538961\|gb\|EEF40558.1\|	2.4e-63	73.84	conserved hypothetical protein [Ricinus communis]	[more]
gi\|566200259\|ref\|XP_002319322.2\|	3.2e-63	73.26	hypothetical protein POPTR_0013s09070g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018639	DUF2062

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G031380.1	CmoCh04G031380.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018639	Domain of unknown function DUF2062	PFAM	PF09835	DUF2062	coord: 21..159 score: 3.3
None	No IPR available	PANTHER	PTHR35102	FAMILY NOT NAMED	coord: 2..179 score: 1.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G031380	Cucsa.088470	Cucumber (Gy14) v1	cgycmoB0166
CmoCh04G031380	CmaCh15G000250	Cucurbita maxima (Rimu)	cmacmoB308
CmoCh04G031380	CmaCh04G030170	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G031380	Cla011921	Watermelon (97103) v1	cmowmB723
CmoCh04G031380	Csa2G401460	Cucumber (Chinese Long) v2	cmocuB684
CmoCh04G031380	MELO3C008103	Melon (DHL92) v3.5.1	cmomeB671
CmoCh04G031380	ClCG11G008280	Watermelon (Charleston Gray)	cmowcgB622
CmoCh04G031380	CSPI02G24810	Wild cucumber (PI 183967)	cmocpiB695
CmoCh04G031380	Lsi03G004680	Bottle gourd (USVL1VR-Ls)	cmolsiB645
CmoCh04G031380	Cp4.1LG01g26240	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G031380	MELO3C008103.2	Melon (DHL92) v3.6.1	cmomedB759
CmoCh04G031380	CsaV3_2G033320	Cucumber (Chinese Long) v3	cmocucB0812
CmoCh04G031380	Cla97C11G215290	Watermelon (97103) v2	cmowmbB708
CmoCh04G031380	Bhi04G002067	Wax gourd	cmowgoB0857
CmoCh04G031380	CsGy2G024540	Cucumber (Gy14) v2	cgybcmoB236
CmoCh04G031380	Carg22870	Silver-seed gourd	carcmoB1454
CmoCh04G031380	Carg06089	Silver-seed gourd	carcmoB0033

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G031380	CmoCh15G000250	Cucurbita moschata (Rifu)	cmocmoB261

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G031380	Cucurbita pepo (Zucchini)	cmocpeB657