Carg22870 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22870
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Cytoplasmic membrane protein
Location	Cucurbita_argyrosperma_scaffold_248 : 147062 .. 150105 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACAGTAGGGCATACACGTCCGACCAGTTGGTTTAACCAAAAGATCGTCGATCCTCTCCTCCAAATCCTCCAGAGGTTCTTTCTCTCATTGCGCATTTGAATTGTGAAATGTTTTATTTCTCTTGGAGCAGCGAAGTTTGTTTGATAGGAATTTGACGAACTCTGTTCTTCATTTTGTACAATTTTGCTTGGGAATTTTTAATCTGAGGATCAGATATCGCATGTCATTTTACAGATTGTCTATGTTTGGAAGCGTATTTTGATTTGATTTTGAGTTCTGACCTTCTAGTATGGAATGAAAGGCATATTCCTAAAGAGAAAAATGAGAAGTGCTGGTTTCAATGATTTCAGGAATTACTTTTTCCCTCTCTTTTCATGAATTCTAGGAGTTGTTTTTGTTACTTCTTTTCTCAAAGAGACAAATGATCCAAAGCTCCTCTTAATTTTCTGAAGATTGGCCTTGAAGAAATTACTAAATCCTTTATACTCTCTATTCTTGGTTTTGCTGTTGAAGGGGCGCAGAGCCGAAGCAACTGGCATTCTCTGCAGCTCTCGGCACAACCCTGGGACTGTTTCCTATATGCGGTATATATTTCCTTTACAGTACAGAGACTACTGGACTCTGTTGCTTTCACACTTAACTGCATTATGTTTCTCAAGATGTGAAGTTCTTTAATGTGGTCAAGTTCATATTAAAAAAGGGTGGAAGCTTTACTCTCTTGGGTATTTCTGTATGTATTCCCTGTTTATCATTGGTTTTCGATCTCAGTTTGTTATATGATTGATGTTAAAAGCATAGCAGTTTTTGAATCATGGGGTAAATATAAACATCCAAGCAGACCTCGTCTTAAAACCAATATAGAACATTTGAGACTGACGAAATGTCAAAAGCCAGAAAAGGTGAGTATAATATAGGTTCTAAGGGGCATTTCTATTCTTTTTAAATAGAGATAAAAAAAAAAATGTAGAAATTTAAGATAGATGGTATCAGGGATATTGCGGAAGCTCCTTTCTCTTGTTCTTTTTCTTGGTTATTGTTTCATTCGTTACTGAACCACATTTTTACGTTAAGGACTTGTTAGAGATGTTAGGTTAAATTTTTTGCTTCAGTTTATGTGATTAACTCTAGCTATATATGTGTTTAAATAATGTGCGAAGTTCATACCACCATCAATTTGATATTTTATCTTTCATTTACACAGGGGTCCCTGTTTTCCTATGCGGGTTTGCAATTGCATTTCTTGGACCTCTTTGTCATGCTCCAACAGTGATGCTTGCCAACTTTGTTGTTACTCCCATAGAATTGAGGTACTTGTATTCATTTCAGTAATACGAACACTGGAGAGTTGGATCTTTATTCTCACATTCTGATGTGAAGCAGTAGCTATTTTTTGTAGGGAAAAATACTTATAAATAAGCAACTTTATATATTATTTATATATGCGAGCATTTCTCGAGTCAGAGGCTTGGGGATGTTTCATCCCTCTCATTTGTCGATTATTTTTTATTTTTTGCTCTGAAGCTTGGTGGTGCCTTTCTTGCGCTTTGGTGAAGCAATTTCCGGGGGACCTCGTTTCCCATTTACACCTGATGCCTTGAAGAAAGTTTTTACAGGCCAAGCTTCGCATGAAGTACTACTTAGTATTGCTCATGTGGTAAGGCTTCTTCTACATACTAATTTCAGTGCTGTGCATGCGGGGTTATCATTGTTACTCTTTTTTGTCTTTGCTCAGGATTAGACTATAAGATCACCTATTAGTAGCAGATCTCAAGATCAAATACTTCAATTAATGAATCGAATTGGTTTGAGAAGCTAGAAGATTGTACTTCTAAAAGATCCATTTTTAAGAGTTGTTGTTGGTTGAGTGCACATAAGGAGGTCAGCTCTGGTTTTGTTGACACCAAATCCTCACTTTTTCTAGCTAAAACTCATAATTACGTTTTAGAGGTCTTCAAGGAGAATGTGAAAATAGATTGTGAAAGATTTTGATGAGTTAGAGAAGTTAGACTTTGGCTCTGTTGATGCAAAAATATTCATGAAAACTTAGTAGGAACAAATGGTTGGCAGATTGAATTGTATAAGCTTAGAGAGAGAGATAGGGGTGTGTGTATGGAGGAGAAGATATATGCATATAGAAGAGGATCAAGGTTCGCATAAAAGGATGTTCGGGCTTACCTTGAGGTAAGTATGAAAGCAAGTATTATATGGTCTCTTACGGTCCTAACTTCCTTGGAATACACACATTAGTGAATGTACAACTTATATACCCCTTCGCAACAAGAAAGACAAACTTGTGTATCAAAATGAAAACTTGCATACTAGGAAGACAATAGATTTGTCAAGATGCAACTCGAGTATTGTTCATTTTACTCCTTGGATGACGCTCGAGTATTGTTCATTTTACTCCTTGGATGACATTCGACAGTGGTGAAATGGAAAGATGCATGAACTTAGTTTCTTATCTTCTCCAATTGTCAATTTTTCTCTCTCTGTACGTCGAACTGCTTGCTGTACTTTTATCAGTCATTCCATTTTCCCAGTTATCTTGTTCTAGAGTTTTGAATGAACGTCAGTTATCTTTATTTGCTCATTCTTCCCTTCATATGATATATCTGCCAAGTAATCTGGAGAACCTAACCAACCATCCCGTGTTGTGTGATTGCGCCATACTGTGTGATCAAATACATCAATCGTCTGTTATTATCCCCAACACTAACACCATGTCACCAACCAAGATCGTTCTCCCCGTGGTTGAGCTGATTCTCCATATTTGCAGTTCTAACATGTGGATATTAGTTCGTACGTTGTCATTTTGTTCGGTTGCTTCATTCGAATTAAAAAACTGACTGAAAGCTTTCTATCGATATTGGCAGTTGTTGGGATGGCTTGTTGCGACGCCCTTTATTTTGGGCGTTGGATACATGTTGTTTTTACCATGTTTCAAGATTTTGGTCCGCAAGTTCAGCACTGGTGCATCAAGCCCAAAGAAGTCACCTCGTTCACACTCAGAAGTCAGACTGAAGGTGAGGGATATCTGA

mRNA sequence

ATGGCGACAGTAGGGCATACACGTCCGACCAGTTGGTTTAACCAAAAGATCGTCGATCCTCTCCTCCAAATCCTCCAGAGGGGCGCAGAGCCGAAGCAACTGGCATTCTCTGCAGCTCTCGGCACAACCCTGGGACTGTTTCCTATATGCGGGGTCCCTGTTTTCCTATGCGGGTTTGCAATTGCATTTCTTGGACCTCTTTGTCATGCTCCAACAGTGATGCTTGCCAACTTTGTTGTTACTCCCATAGAATTGAGCTTGGTGGTGCCTTTCTTGCGCTTTGGTGAAGCAATTTCCGGGGGACCTCGTTTCCCATTTACACCTGATGCCTTGAAGAAAGTTTTTACAGGCCAAGCTTCGCATGAAGTACTACTTAGTATTGCTCATGTGTTGTTGGGATGGCTTGTTGCGACGCCCTTTATTTTGGGCGTTGGATACATGTTGTTTTTACCATGTTTCAAGATTTTGGTCCGCAAGTTCAGCACTGGTGCATCAAGCCCAAAGAAGTCACCTCGTTCACACTCAGAAGTCAGACTGAAGGTGAGGGATATCTGA

Coding sequence (CDS)

ATGGCGACAGTAGGGCATACACGTCCGACCAGTTGGTTTAACCAAAAGATCGTCGATCCTCTCCTCCAAATCCTCCAGAGGGGCGCAGAGCCGAAGCAACTGGCATTCTCTGCAGCTCTCGGCACAACCCTGGGACTGTTTCCTATATGCGGGGTCCCTGTTTTCCTATGCGGGTTTGCAATTGCATTTCTTGGACCTCTTTGTCATGCTCCAACAGTGATGCTTGCCAACTTTGTTGTTACTCCCATAGAATTGAGCTTGGTGGTGCCTTTCTTGCGCTTTGGTGAAGCAATTTCCGGGGGACCTCGTTTCCCATTTACACCTGATGCCTTGAAGAAAGTTTTTACAGGCCAAGCTTCGCATGAAGTACTACTTAGTATTGCTCATGTGTTGTTGGGATGGCTTGTTGCGACGCCCTTTATTTTGGGCGTTGGATACATGTTGTTTTTACCATGTTTCAAGATTTTGGTCCGCAAGTTCAGCACTGGTGCATCAAGCCCAAAGAAGTCACCTCGTTCACACTCAGAAGTCAGACTGAAGGTGAGGGATATCTGA

Protein sequence

MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFAIAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQASHEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLKVRDI

Homology

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BLAST of Carg22870 vs. NCBI nr
Match: XP_022939704.1 (uncharacterized protein LOC111445511 isoform X1 [Cucurbita moschata])

HSP 1 Score: 360.5 bits (924), Expect = 3.3e-96
Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60
           MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA
Sbjct: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60

Query: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120
           IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS
Sbjct: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120

Query: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLK 180
           HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSP SHSEVRLK
Sbjct: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPHSHSEVRLK 180

Query: 181 V 182
           +
Sbjct: 181 L 181

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BLAST of Carg22870 vs. NCBI nr
Match: XP_022993435.1 (uncharacterized protein LOC111489450 [Cucurbita maxima])

HSP 1 Score: 360.1 bits (923), Expect = 4.3e-96
Identity = 178/181 (98.34%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60
           MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA
Sbjct: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60

Query: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120
           IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS
Sbjct: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120

Query: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLK 180
           HEVLLSIAHVLLGWLVATPFILG+GYMLFLPCFKILVRKFSTGASSPKKSP SHSEVRLK
Sbjct: 121 HEVLLSIAHVLLGWLVATPFILGIGYMLFLPCFKILVRKFSTGASSPKKSPHSHSEVRLK 180

Query: 181 V 182
           +
Sbjct: 181 L 181

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BLAST of Carg22870 vs. NCBI nr
Match: XP_023551372.1 (uncharacterized protein LOC111809211 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358.2 bits (918), Expect = 1.6e-95
Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60
           MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA
Sbjct: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60

Query: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120
           IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS
Sbjct: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120

Query: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLK 180
           HEVLLSIAHVLLGWLVATPFILG+GYMLFLPCFKILVRKFSTGASSPKKSP  HSEVRLK
Sbjct: 121 HEVLLSIAHVLLGWLVATPFILGIGYMLFLPCFKILVRKFSTGASSPKKSPHPHSEVRLK 180

Query: 181 V 182
           +
Sbjct: 181 L 181

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BLAST of Carg22870 vs. NCBI nr
Match: XP_008441199.1 (PREDICTED: uncharacterized protein LOC103485404 [Cucumis melo])

HSP 1 Score: 340.9 bits (873), Expect = 2.7e-90
Identity = 166/184 (90.22%), Postives = 176/184 (95.65%), Query Frame = 0


Query: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60
           MATVGH RPTSWF+QKIVDPLLQILQRGAEPKQLAFSAALG TLGLFPICGV VFLCGFA
Sbjct: 1   MATVGHARPTSWFSQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFA 60

Query: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120
           IAFLG LCHAPTVMLANF+ TPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTG+AS
Sbjct: 61  IAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGEAS 120

Query: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLK 180
           HEVLLSIAH+LLGWLVA PFILG+GY+LFLPCFKILVRKFST ASSPKKSP SH+++RLK
Sbjct: 121 HEVLLSIAHLLLGWLVAAPFILGIGYLLFLPCFKILVRKFSTVASSPKKSPHSHTDIRLK 180

Query: 181 VRDI 185
           VRD+
Sbjct: 181 VRDV 184

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BLAST of Carg22870 vs. NCBI nr
Match: XP_004138658.1 (PREDICTED: uncharacterized protein LOC101220662 [Cucumis sativus] >KGN63086.1 hypothetical protein Csa_2G401460 [Cucumis sativus])

HSP 1 Score: 336.7 bits (862), Expect = 5.1e-89
Identity = 164/184 (89.13%), Postives = 174/184 (94.57%), Query Frame = 0


Query: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60
           MATVGH R TSWFNQKIVDPLLQILQRGAEPKQLAFSAALG TLGLFPICGV VFLCGFA
Sbjct: 1   MATVGHARSTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFA 60

Query: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120
           IAFLG LCHAPTVMLANF+ TPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTG+AS
Sbjct: 61  IAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGEAS 120

Query: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLK 180
           HEVLLSIAH+LLGWLVA PFILG+GY+LFLPCFKILVRKFST ASSPKK P SH++++LK
Sbjct: 121 HEVLLSIAHLLLGWLVAAPFILGIGYLLFLPCFKILVRKFSTVASSPKKPPHSHTDIKLK 180

Query: 181 VRDI 185
           VRD+
Sbjct: 181 VRDV 184

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BLAST of Carg22870 vs. TAIR10
Match: AT4G10140.1 (unknown protein)

HSP 1 Score: 236.9 bits (603), Expect = 1.0e-62
Identity = 119/176 (67.61%), Postives = 134/176 (76.14%), Query Frame = 0


Query: 8   RPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFAIAFLGPL 67
           R  +WFN+KI DPLLQIL+RG EPKQLAFSAALG TLG+FPICGVPV LCG A A LG  
Sbjct: 7   RLKAWFNKKITDPLLQILRRGTEPKQLAFSAALGITLGIFPICGVPVLLCGVAFALLGSS 66

Query: 68  CHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQASHEVLLSI 127
           CHAPTVMLAN + TP+EL+LVVPFLR GE ++GGP FP T DALKKVFTGQAS EV LSI
Sbjct: 67  CHAPTVMLANIIATPVELALVVPFLRLGEKVTGGPHFPLTSDALKKVFTGQASQEVFLSI 126

Query: 128 AHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLKVRD 184
            + LLGWLVATPF     Y++ LPCF ILVRKF   AS+ K      +E+  K RD
Sbjct: 127 GNALLGWLVATPFFFITLYVVLLPCFTILVRKFGGVASTQKLPTSMETELNPKPRD 182

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BLAST of Carg22870 vs. TAIR10
Match: AT1G33490.1 (unknown protein)

HSP 1 Score: 235.3 bits (599), Expect = 2.9e-62
Identity = 115/157 (73.25%), Postives = 133/157 (84.71%), Query Frame = 0


Query: 12  WFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFAIAFLGPLCHAP 71
           WF++KI +PL+QIL+RGAEPKQLAFSAALG T+G+FPICGV V LCG AIA LG LCHAP
Sbjct: 11  WFDKKISEPLIQILRRGAEPKQLAFSAALGITMGVFPICGVTVLLCGVAIASLGSLCHAP 70

Query: 72  TVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQASHEVLLSIAHVL 131
           TVMLANF+ TPIELSLVVPFLR GE I+GGP FP T DALKKVFTGQAS +V LSI + L
Sbjct: 71  TVMLANFIATPIELSLVVPFLRLGEKITGGPHFPLTSDALKKVFTGQASRDVFLSIGNAL 130

Query: 132 LGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPK 169
           LGWL+A PF++   Y++FLPCFKILVRKFS+  S+ K
Sbjct: 131 LGWLIAAPFVIVALYIMFLPCFKILVRKFSSVDSTAK 167

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BLAST of Carg22870 vs. TrEMBL
Match: tr|A0A1S3B2V5|A0A1S3B2V5_CUCME (uncharacterized protein LOC103485404 OS=Cucumis melo OX=3656 GN=LOC103485404 PE=4 SV=1)

HSP 1 Score: 340.9 bits (873), Expect = 1.8e-90
Identity = 166/184 (90.22%), Postives = 176/184 (95.65%), Query Frame = 0


Query: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60
           MATVGH RPTSWF+QKIVDPLLQILQRGAEPKQLAFSAALG TLGLFPICGV VFLCGFA
Sbjct: 1   MATVGHARPTSWFSQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFA 60

Query: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120
           IAFLG LCHAPTVMLANF+ TPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTG+AS
Sbjct: 61  IAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGEAS 120

Query: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLK 180
           HEVLLSIAH+LLGWLVA PFILG+GY+LFLPCFKILVRKFST ASSPKKSP SH+++RLK
Sbjct: 121 HEVLLSIAHLLLGWLVAAPFILGIGYLLFLPCFKILVRKFSTVASSPKKSPHSHTDIRLK 180

Query: 181 VRDI 185
           VRD+
Sbjct: 181 VRDV 184

[Close]

BLAST of Carg22870 vs. TrEMBL
Match: tr|A0A0A0LSU8|A0A0A0LSU8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G401460 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 3.4e-89
Identity = 164/184 (89.13%), Postives = 174/184 (94.57%), Query Frame = 0


Query: 1   MATVGHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFA 60
           MATVGH R TSWFNQKIVDPLLQILQRGAEPKQLAFSAALG TLGLFPICGV VFLCGFA
Sbjct: 1   MATVGHARSTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGITLGLFPICGVTVFLCGFA 60

Query: 61  IAFLGPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQAS 120
           IAFLG LCHAPTVMLANF+ TPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTG+AS
Sbjct: 61  IAFLGSLCHAPTVMLANFIATPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGEAS 120

Query: 121 HEVLLSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLK 180
           HEVLLSIAH+LLGWLVA PFILG+GY+LFLPCFKILVRKFST ASSPKK P SH++++LK
Sbjct: 121 HEVLLSIAHLLLGWLVAAPFILGIGYLLFLPCFKILVRKFSTVASSPKKPPHSHTDIKLK 180

Query: 181 VRDI 185
           VRD+
Sbjct: 181 VRDV 184

[Close]

BLAST of Carg22870 vs. TrEMBL
Match: tr|B9S6X9|B9S6X9_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1329390 PE=4 SV=1)

HSP 1 Score: 273.1 bits (697), Expect = 4.6e-70
Identity = 135/174 (77.59%), Postives = 147/174 (84.48%), Query Frame = 0


Query: 11  SWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFAIAFLGPLCHA 70
           +WF++KIVDPL QIL RG EPKQLAFSAALG TLG+FPICGV V LCG AIA LG LCHA
Sbjct: 10  AWFSKKIVDPLYQILSRGTEPKQLAFSAALGITLGVFPICGVTVLLCGMAIAMLGSLCHA 69

Query: 71  PTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQASHEVLLSIAHV 130
           P+VMLANFV TPIELSLVVPFLRFGE ISGGP FP T DA KKV TGQASHEVLLSI H 
Sbjct: 70  PSVMLANFVATPIELSLVVPFLRFGELISGGPHFPLTSDAFKKVLTGQASHEVLLSILHA 129

Query: 131 LLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLKVRDI 185
           L+GWLVA PFIL   Y++FLPCFK+LVRKFS+G  SP KSP S +EVRLKVRD+
Sbjct: 130 LMGWLVAAPFILAALYIIFLPCFKVLVRKFSSGPGSPIKSPTSFTEVRLKVRDV 183

[Close]

BLAST of Carg22870 vs. TrEMBL
Match: tr|A0A2C9WFQ3|A0A2C9WFQ3_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G202700 PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.8e-69
Identity = 134/174 (77.01%), Postives = 147/174 (84.48%), Query Frame = 0


Query: 11  SWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFAIAFLGPLCHA 70
           +WFN+KIVDPL QI+ RG EPKQLAFSAALG TLG+FPICGV V LCG AIA LG LCHA
Sbjct: 10  AWFNKKIVDPLYQIISRGTEPKQLAFSAALGITLGIFPICGVTVLLCGMAIALLGSLCHA 69

Query: 71  PTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQASHEVLLSIAHV 130
           PTVMLANFV TPIELSLVVPFLRFGE ISGGP FP T DALKKV TGQASHEVLLSI H 
Sbjct: 70  PTVMLANFVATPIELSLVVPFLRFGEVISGGPHFPLTSDALKKVLTGQASHEVLLSITHA 129

Query: 131 LLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLKVRDI 185
           LLGWLVA PFIL   Y++F P FKILVRKF++  SSP+KSP S +E++LKVRD+
Sbjct: 130 LLGWLVAVPFILAALYIMFFPFFKILVRKFNSVPSSPRKSPNSFTEIQLKVRDV 183

[Close]

BLAST of Carg22870 vs. TrEMBL
Match: tr|V7BRK5|V7BRK5_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G002300g PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 3.9e-69
Identity = 133/180 (73.89%), Postives = 149/180 (82.78%), Query Frame = 0


Query: 5   GHTRPTSWFNQKIVDPLLQILQRGAEPKQLAFSAALGTTLGLFPICGVPVFLCGFAIAFL 64
           G    T+WF +K+ DPLL I++RGAEP QLAFSAALG TLG+FPICGV VFLCG AIA L
Sbjct: 4   GKVGTTNWFQKKVTDPLLSIIRRGAEPNQLAFSAALGLTLGVFPICGVTVFLCGVAIALL 63

Query: 65  GPLCHAPTVMLANFVVTPIELSLVVPFLRFGEAISGGPRFPFTPDALKKVFTGQASHEVL 124
           GPLCHAPTVMLANF+ TPIELSLVVPFLRFGEAI+GG  FP T DALKKVFTGQASHEV+
Sbjct: 64  GPLCHAPTVMLANFIATPIELSLVVPFLRFGEAITGGSHFPLTSDALKKVFTGQASHEVI 123

Query: 125 LSIAHVLLGWLVATPFILGVGYMLFLPCFKILVRKFSTGASSPKKSPRSHSEVRLKVRDI 184
           LSIAH LLGWL A+P ILG+ +++ LPCFKILV KFS+  SSPKK    HSE +LKVR I
Sbjct: 124 LSIAHALLGWLAASPIILGILFIVLLPCFKILVHKFSSVPSSPKKPLHPHSETKLKVRAI 183

The following BLAST results are available for this feature:

BLAST of Carg22870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939704.1	3.3e-96	98.90	uncharacterized protein LOC111445511 isoform X1 [Cucurbita moschata]	[more]
XP_022993435.1	4.3e-96	98.34	uncharacterized protein LOC111489450 [Cucurbita maxima]	[more]
XP_023551372.1	1.6e-95	97.79	uncharacterized protein LOC111809211 [Cucurbita pepo subsp. pepo]	[more]
XP_008441199.1	2.7e-90	90.22	PREDICTED: uncharacterized protein LOC103485404 [Cucumis melo]	[more]
XP_004138658.1	5.1e-89	89.13	PREDICTED: uncharacterized protein LOC101220662 [Cucumis sativus] >KGN63086.1 hy...	[more]

BLAST of Carg22870 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G10140.1	1.0e-62	67.61	unknown protein	[more]
AT1G33490.1	2.9e-62	73.25	unknown protein	[more]

BLAST of Carg22870 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg22870 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B2V5\|A0A1S3B2V5_CUCME	1.8e-90	90.22	uncharacterized protein LOC103485404 OS=Cucumis melo OX=3656 GN=LOC103485404 PE=...	[more]
tr\|A0A0A0LSU8\|A0A0A0LSU8_CUCSA	3.4e-89	89.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G401460 PE=4 SV=1	[more]
tr\|B9S6X9\|B9S6X9_RICCO	4.6e-70	77.59	Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1329390 PE=4 SV=1	[more]
tr\|A0A2C9WFQ3\|A0A2C9WFQ3_MANES	1.8e-69	77.01	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G202700 PE=4 SV=...	[more]
tr\|V7BRK5\|V7BRK5_PHAVU	3.9e-69	73.89	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_005G002300g PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018639	DUF2062

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22870-RA	Carg22870-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018639	Domain of unknown function DUF2062	PFAM	PF09835	DUF2062	coord: 21..159 e-value: 1.5E-11 score: 44.2
None	No IPR available	PANTHER	PTHR35102	FAMILY NOT NAMED	coord: 4..183

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22870	Cla011921	Watermelon (97103) v1	carwmB1081
Carg22870	Csa2G401460	Cucumber (Chinese Long) v2	carcuB1097
Carg22870	MELO3C008103	Melon (DHL92) v3.5.1	carmeB1051
Carg22870	ClCG11G008280	Watermelon (Charleston Gray)	carwcgB1051
Carg22870	CSPI02G24810	Wild cucumber (PI 183967)	carcpiB1119
Carg22870	Cucsa.088470	Cucumber (Gy14) v1	carcgyB1196
Carg22870	CmaCh04G030170	Cucurbita maxima (Rimu)	carcmaB1497
Carg22870	CmaCh15G000250	Cucurbita maxima (Rimu)	carcmaB1496
Carg22870	CmoCh15G000250	Cucurbita moschata (Rifu)	carcmoB1453
Carg22870	CmoCh04G031380	Cucurbita moschata (Rifu)	carcmoB1454
Carg22870	Lsi03G004680	Bottle gourd (USVL1VR-Ls)	carlsiB986
Carg22870	Cp4.1LG01g26240	Cucurbita pepo (Zucchini)	carcpeB1509
Carg22870	CsGy2G024540	Cucumber (Gy14) v2	carcgybB1062
Carg22870	MELO3C008103.2	Melon (DHL92) v3.6.1	carmedB1065
Carg22870	CsaV3_2G033320	Cucumber (Chinese Long) v3	carcucB1130
Carg22870	Cla97C11G215290	Watermelon (97103) v2	carwmbB1138
Carg22870	Bhi04G002067	Wax gourd	carwgoB1273

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg22870	Carg06089	Silver-seed gourd	carcarB028

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22870	Cucurbita pepo (Zucchini)	carcpeB1508