Cp4.1LG01g24970 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAAAGGCTCTATTTGTGTTAGTTCGCGCAATACTGAACCGAATAAACCTTGCTGTCACTCTTTCGAAGATTTTACTTCACAGAACGCAAATGGCCATGCGATCGGTGTTCGGTCGTTCCTCTCTGACTCCGTCCACGGTGCGTGCCGCCGGCGTCGGTGGATTCCGATTCCTCTCGGACGGAAAAGGTCGAGTACTCAGTGAGGAGGAGCGTGCTGCTGAGAACGTCTACATTCAGGTTGAATTATTAGATTCGAATGTTCGAGAAAAAAATGAGTTGAAAAGTAGTAGTAATTCTAGTATCGATCTGCTTTGTTGAATGTTCAGTTGTTGGATTCTCGTACGGACTTGACTGAGATCGAAGTTACTGCTTCTGTACTTTCTTTTTGTGCGAGGAGTTGTGATCTACGATTTAGTTGTAGGAGTTCGATAATCAATCTGTTTGATCAAACGTTCACTCGTTAGAAACTGAAATAAATATGGACTGGAGTTTGGGAATATTTACTGTTTATATGAGATTGTATTTTCTTTCTGTGCGAGGAGTTTGTGTTTATTCGATTTTTAGTAGGAATCCAATCATCAATCTGCTTCATCGAATGCTCGCTTGTTCCAAACTAAAATATAAATAGACTGGGATGAGATTGAAGATACTATTTATGTTGGCTTGTACTTTCTTCTTGCTCGAGGATTTTGTGTTCTCCAATTTGTAGTTATCGTTTTGCTAATGTTTGTGTAGAAAATGGAAAGAGAGAGACTGGAGAAGCAAAGGCTTAAGGCAGAGAAAGAAAGGGCCGAGAAGAAGGAAGAACAGTCGGAGAAGGTAATTCATTACTGGCATTGTTTTCATTAAAATTGGCTGCTGCCAAATATTTGTTAGTCGATCTGTGGTAAGAGAGGCTATGACTAACCGTATTTTGTGATCGTTGCAACTTTTATATATAAATCTTTACGGTCTTGTGGGATCCATCATCCCTAATAATTAGTTGACAACTCTTTGATTGTGTAGTTTCCATGGGTTATTTCTTCGATGTTAAATTTTGATTTCTTATACCTATGTGGGGATTGAGCCCAAGTGTCAGAAATTGATAAAATAAAAAAGAAACCTATGTGATTTTTTTTTTCTTTTTTAAATTATGGAAAAAGTGGAGGCTGTCGGGAATGTGGCTGATAAGAAAAATGACATCCTTCACCAAATTGATCAGATTGATATGTTGGATGCACAAGGCATCGTCCAAACGCAGCAAAAAGAAGAGAATGTTAGAGCTAACACTAAATGAGCAGCGATGTTTGATCAGAAATGCAAAATTAAATGGTTGAATGAAGGGGATGAGAGGGCTTCCTTCTTCCACGGTTGGGCTTCAGCTATGAAAAATAGAGCCTGTTTATCCATTCTAGAAATTGAAGATGAAAGATTTTTATCTACAAAAACAAGGATTGAAGAGAATATTTTAGGCTTTTATAGAAAGTTGCATGCTGATGATAGAGGCCCTCAGTTTACTATTGAAGGGATTGATTGGGCTTTGATCGATAGTCAAATAACGTCGAGATTAGAAAGACCTTTCAGCTAGAAAGAGATTCTTAAGGCATTTCAGAATATAGGCAGTCTCAAGTCCCTAGGACCTGATGGAATGACGGGAGAGTTTGGAACACCTTGGAAGTCATCAGATCTAGTGCAAGTGTTCCCAGACTTTAGCTAATGTGGTCATGTATATTATAGAACACCATGTATATGTATAAAGAAGCTATTATGGTTGACTTGAGCTAATGCATCATTGCGGTTTCTGTGGTAATTACGCGTGTTCATAGCTGGTTGGCATTTTAAATGGACGCCTGCTACCCAGTCCTCATACCTTCGTTTCTGCTACTTTCACCTGTTATTCGTAGAAACTTGTTAGCGCCACTCAAGTTCAAGATCAGTTTATGATATGTTCTGTTGATAAAAGGTGCAAACTAGGATGCTGTTTTTGGACGTTTGGAGTTTTTATCATCCCGAAGACCCTTTCTGTAAATTATATTAATTCAATGGGTTCTTTAAAACTAACAAGTACAGGAGGGAAATTGTAGTGAACTTTCTTTTTTTCAGGTGTGCAGTGTGCTGAATCTCCTTTTTTTAACATGTTTCTAATTATCACTTTATACTTCTAGAATATGACAAACTTTTGCTACTTTTTTCTGTAACTACTAAGATTAGTCAAACAAATAAATAAGTACAATTGATGATAAAGTTCATTTCACTATATCCACCAAGGGAAAAGTTGCATCATTGTCAATCAAATATTTGAATGCCAGTTTTGTTGGTTCTTATTTTAGAAATTGTGTTTTATCTTTTGCTTCTCATTTGCAGAAACGTGAAGGGACCCAGTAGATGGTGGTGGCTCCTCTGCAAGTCTGGGAAGATCTGCGTTGGAGTTTGGCCACAAGGAATAAAATGTGAGATTCCTCACCCCATCACCGCTTTTCTGTAACCGACTGTTTTATCTGGATTTCGTTTTTTTGTATATTAAACAACGTTGCATGTCTTTGATTGTCCTCCCACTCTGAGAGTGCGTGTCATCTGATATGTTTTAAGACGCAGTGTTCTGCACTTGCTGTTCTGCACCACATCCCTTCACCTCTCTCTCAATAAGCCATTATATTTGTTTTTCCTTTTCCTTTCGGTCCTGCTCCTTCTAAATCCTTTGTTCGTTGATTGTCCTTTTCCTTCTCCCTCCCAGCTTTAGTTTG TGAAAGGCTCTATTTGTGTTAGTTCGCGCAATACTGAACCGAATAAACCTTGCTGTCACTCTTTCGAAGATTTTACTTCACAGAACGCAAATGGCCATGCGATCGGTGTTCGGTCGTTCCTCTCTGACTCCGTCCACGGTGCGTGCCGCCGGCGTCGGTGGATTCCGATTCCTCTCGGACGGAAAAGGTCGAGTACTCAGTGAGGAGGAGCGTGCTGCTGAGAACGTCTACATTCAGTTGTTGGATTCTCGTACGGACTTGACTGAGATCGAAGTTACTGCTTCTAAAATGGAAAGAGAGAGACTGGAGAAGCAAAGGCTTAAGGCAGAGAAAGAAAGGGCCGAGAAGAAGGAAGAACAGTCGGAGAAGAAACTTGTTAGCGCCACTCAAGTTCAAGATCAGTTTATGATATGTTCTGTTGATAAAAGAAACGTGAAGGGACCCAGTAGATGGTGGTGGCTCCTCTGCAAGTCTGGGAAGATCTGCGTTGGAGTTTGGCCACAAGGAATAAAATGTGAGATTCCTCACCCCATCACCGCTTTTCTGTAACCGACTGTTTTATCTGGATTTCGTTTTTTTGTATATTAAACAACGTTGCATGTCTTTGATTGTCCTCCCACTCTGAGAGTGCGTGTCATCTGATATGTTTTAAGACGCAGTGTTCTGCACTTGCTGTTCTGCACCACATCCCTTCACCTCTCTCTCAATAAGCCATTATATTTGTTTTTCCTTTTCCTTTCGGTCCTGCTCCTTCTAAATCCTTTGTTCGTTGATTGTCCTTTTCCTTCTCCCTCCCAGCTTTAGTTTG ATGGCCATGCGATCGGTGTTCGGTCGTTCCTCTCTGACTCCGTCCACGGTGCGTGCCGCCGGCGTCGGTGGATTCCGATTCCTCTCGGACGGAAAAGGTCGAGTACTCAGTGAGGAGGAGCGTGCTGCTGAGAACGTCTACATTCAGTTGTTGGATTCTCGTACGGACTTGACTGAGATCGAAGTTACTGCTTCTAAAATGGAAAGAGAGAGACTGGAGAAGCAAAGGCTTAAGGCAGAGAAAGAAAGGGCCGAGAAGAAGGAAGAACAGTCGGAGAAGAAACTTGTTAGCGCCACTCAAGTTCAAGATCAGTTTATGATATGTTCTGTTGATAAAAGAAACGTGAAGGGACCCAGTAGATGGTGGTGGCTCCTCTGCAAGTCTGGGAAGATCTGCGTTGGAGTTTGGCCACAAGGAATAAAATGTGAGATTCCTCACCCCATCACCGCTTTTCTGTAA MAMRSVFGRSSLTPSTVRAAGVGGFRFLSDGKGRVLSEEERAAENVYIQLLDSRTDLTEIEVTASKMERERLEKQRLKAEKERAEKKEEQSEKKLVSATQVQDQFMICSVDKRNVKGPSRWWWLLCKSGKICVGVWPQGIKCEIPHPITAFL
BLAST of Cp4.1LG01g24970 vs. TrEMBL
Match: A0A0A0K8J7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G046230 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 3.1e-18 Identity = 66/94 (70.21%), Postives = 70/94 (74.47%), Query Frame = 1
BLAST of Cp4.1LG01g24970 vs. TrEMBL
Match: A0A068TUJ1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00029641001 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 7.0e-10 Identity = 51/97 (52.58%), Postives = 61/97 (62.89%), Query Frame = 1
BLAST of Cp4.1LG01g24970 vs. TrEMBL
Match: B9HVV9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s24670g PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.5e-09 Identity = 48/95 (50.53%), Postives = 59/95 (62.11%), Query Frame = 1
BLAST of Cp4.1LG01g24970 vs. TrEMBL
Match: V4TF21_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017346mg PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.5e-09 Identity = 51/94 (54.26%), Postives = 58/94 (61.70%), Query Frame = 1
BLAST of Cp4.1LG01g24970 vs. TrEMBL
Match: A0A067E0M2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034789mg PE=4 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.5e-09 Identity = 51/94 (54.26%), Postives = 58/94 (61.70%), Query Frame = 1
BLAST of Cp4.1LG01g24970 vs. NCBI nr
Match: gi|659113500|ref|XP_008456607.1| (PREDICTED: uncharacterized protein LOC103496516 [Cucumis melo]) HSP 1 Score: 111.7 bits (278), Expect = 1.1e-21 Identity = 69/94 (73.40%), Postives = 72/94 (76.60%), Query Frame = 1
BLAST of Cp4.1LG01g24970 vs. NCBI nr
Match: gi|449446299|ref|XP_004140909.1| (PREDICTED: uncharacterized protein At2g27730, mitochondrial [Cucumis sativus]) HSP 1 Score: 99.8 bits (247), Expect = 4.5e-18 Identity = 66/94 (70.21%), Postives = 70/94 (74.47%), Query Frame = 1
BLAST of Cp4.1LG01g24970 vs. NCBI nr
Match: gi|661896732|emb|CDO99921.1| (unnamed protein product [Coffea canephora]) HSP 1 Score: 72.0 bits (175), Expect = 1.0e-09 Identity = 51/97 (52.58%), Postives = 61/97 (62.89%), Query Frame = 1
BLAST of Cp4.1LG01g24970 vs. NCBI nr
Match: gi|1009165502|ref|XP_015901073.1| (PREDICTED: uncharacterized protein At2g27730, mitochondrial-like [Ziziphus jujuba]) HSP 1 Score: 70.5 bits (171), Expect = 2.9e-09 Identity = 53/95 (55.79%), Postives = 61/95 (64.21%), Query Frame = 1
BLAST of Cp4.1LG01g24970 vs. NCBI nr
Match: gi|1009119695|ref|XP_015876519.1| (PREDICTED: uncharacterized protein At2g27730, mitochondrial-like [Ziziphus jujuba]) HSP 1 Score: 70.1 bits (170), Expect = 3.8e-09 Identity = 50/94 (53.19%), Postives = 61/94 (64.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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