Cp4.1LG01g24970 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG01g24970
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUnknown protein
LocationCp4.1LG01 : 18565319 .. 18568041 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAAGGCTCTATTTGTGTTAGTTCGCGCAATACTGAACCGAATAAACCTTGCTGTCACTCTTTCGAAGATTTTACTTCACAGAACGCAAATGGCCATGCGATCGGTGTTCGGTCGTTCCTCTCTGACTCCGTCCACGGTGCGTGCCGCCGGCGTCGGTGGATTCCGATTCCTCTCGGACGGAAAAGGTCGAGTACTCAGTGAGGAGGAGCGTGCTGCTGAGAACGTCTACATTCAGGTTGAATTATTAGATTCGAATGTTCGAGAAAAAAATGAGTTGAAAAGTAGTAGTAATTCTAGTATCGATCTGCTTTGTTGAATGTTCAGTTGTTGGATTCTCGTACGGACTTGACTGAGATCGAAGTTACTGCTTCTGTACTTTCTTTTTGTGCGAGGAGTTGTGATCTACGATTTAGTTGTAGGAGTTCGATAATCAATCTGTTTGATCAAACGTTCACTCGTTAGAAACTGAAATAAATATGGACTGGAGTTTGGGAATATTTACTGTTTATATGAGATTGTATTTTCTTTCTGTGCGAGGAGTTTGTGTTTATTCGATTTTTAGTAGGAATCCAATCATCAATCTGCTTCATCGAATGCTCGCTTGTTCCAAACTAAAATATAAATAGACTGGGATGAGATTGAAGATACTATTTATGTTGGCTTGTACTTTCTTCTTGCTCGAGGATTTTGTGTTCTCCAATTTGTAGTTATCGTTTTGCTAATGTTTGTGTAGAAAATGGAAAGAGAGAGACTGGAGAAGCAAAGGCTTAAGGCAGAGAAAGAAAGGGCCGAGAAGAAGGAAGAACAGTCGGAGAAGGTAATTCATTACTGGCATTGTTTTCATTAAAATTGGCTGCTGCCAAATATTTGTTAGTCGATCTGTGGTAAGAGAGGCTATGACTAACCGTATTTTGTGATCGTTGCAACTTTTATATATAAATCTTTACGGTCTTGTGGGATCCATCATCCCTAATAATTAGTTGACAACTCTTTGATTGTGTAGTTTCCATGGGTTATTTCTTCGATGTTAAATTTTGATTTCTTATACCTATGTGGGGATTGAGCCCAAGTGTCAGAAATTGATAAAATAAAAAAGAAACCTATGTGATTTTTTTTTTCTTTTTTAAATTATGGAAAAAGTGGAGGCTGTCGGGAATGTGGCTGATAAGAAAAATGACATCCTTCACCAAATTGATCAGATTGATATGTTGGATGCACAAGGCATCGTCCAAACGCAGCAAAAAGAAGAGAATGTTAGAGCTAACACTAAATGAGCAGCGATGTTTGATCAGAAATGCAAAATTAAATGGTTGAATGAAGGGGATGAGAGGGCTTCCTTCTTCCACGGTTGGGCTTCAGCTATGAAAAATAGAGCCTGTTTATCCATTCTAGAAATTGAAGATGAAAGATTTTTATCTACAAAAACAAGGATTGAAGAGAATATTTTAGGCTTTTATAGAAAGTTGCATGCTGATGATAGAGGCCCTCAGTTTACTATTGAAGGGATTGATTGGGCTTTGATCGATAGTCAAATAACGTCGAGATTAGAAAGACCTTTCAGCTAGAAAGAGATTCTTAAGGCATTTCAGAATATAGGCAGTCTCAAGTCCCTAGGACCTGATGGAATGACGGGAGAGTTTGGAACACCTTGGAAGTCATCAGATCTAGTGCAAGTGTTCCCAGACTTTAGCTAATGTGGTCATGTATATTATAGAACACCATGTATATGTATAAAGAAGCTATTATGGTTGACTTGAGCTAATGCATCATTGCGGTTTCTGTGGTAATTACGCGTGTTCATAGCTGGTTGGCATTTTAAATGGACGCCTGCTACCCAGTCCTCATACCTTCGTTTCTGCTACTTTCACCTGTTATTCGTAGAAACTTGTTAGCGCCACTCAAGTTCAAGATCAGTTTATGATATGTTCTGTTGATAAAAGGTGCAAACTAGGATGCTGTTTTTGGACGTTTGGAGTTTTTATCATCCCGAAGACCCTTTCTGTAAATTATATTAATTCAATGGGTTCTTTAAAACTAACAAGTACAGGAGGGAAATTGTAGTGAACTTTCTTTTTTTCAGGTGTGCAGTGTGCTGAATCTCCTTTTTTTAACATGTTTCTAATTATCACTTTATACTTCTAGAATATGACAAACTTTTGCTACTTTTTTCTGTAACTACTAAGATTAGTCAAACAAATAAATAAGTACAATTGATGATAAAGTTCATTTCACTATATCCACCAAGGGAAAAGTTGCATCATTGTCAATCAAATATTTGAATGCCAGTTTTGTTGGTTCTTATTTTAGAAATTGTGTTTTATCTTTTGCTTCTCATTTGCAGAAACGTGAAGGGACCCAGTAGATGGTGGTGGCTCCTCTGCAAGTCTGGGAAGATCTGCGTTGGAGTTTGGCCACAAGGAATAAAATGTGAGATTCCTCACCCCATCACCGCTTTTCTGTAACCGACTGTTTTATCTGGATTTCGTTTTTTTGTATATTAAACAACGTTGCATGTCTTTGATTGTCCTCCCACTCTGAGAGTGCGTGTCATCTGATATGTTTTAAGACGCAGTGTTCTGCACTTGCTGTTCTGCACCACATCCCTTCACCTCTCTCTCAATAAGCCATTATATTTGTTTTTCCTTTTCCTTTCGGTCCTGCTCCTTCTAAATCCTTTGTTCGTTGATTGTCCTTTTCCTTCTCCCTCCCAGCTTTAGTTTG

mRNA sequence

TGAAAGGCTCTATTTGTGTTAGTTCGCGCAATACTGAACCGAATAAACCTTGCTGTCACTCTTTCGAAGATTTTACTTCACAGAACGCAAATGGCCATGCGATCGGTGTTCGGTCGTTCCTCTCTGACTCCGTCCACGGTGCGTGCCGCCGGCGTCGGTGGATTCCGATTCCTCTCGGACGGAAAAGGTCGAGTACTCAGTGAGGAGGAGCGTGCTGCTGAGAACGTCTACATTCAGTTGTTGGATTCTCGTACGGACTTGACTGAGATCGAAGTTACTGCTTCTAAAATGGAAAGAGAGAGACTGGAGAAGCAAAGGCTTAAGGCAGAGAAAGAAAGGGCCGAGAAGAAGGAAGAACAGTCGGAGAAGAAACTTGTTAGCGCCACTCAAGTTCAAGATCAGTTTATGATATGTTCTGTTGATAAAAGAAACGTGAAGGGACCCAGTAGATGGTGGTGGCTCCTCTGCAAGTCTGGGAAGATCTGCGTTGGAGTTTGGCCACAAGGAATAAAATGTGAGATTCCTCACCCCATCACCGCTTTTCTGTAACCGACTGTTTTATCTGGATTTCGTTTTTTTGTATATTAAACAACGTTGCATGTCTTTGATTGTCCTCCCACTCTGAGAGTGCGTGTCATCTGATATGTTTTAAGACGCAGTGTTCTGCACTTGCTGTTCTGCACCACATCCCTTCACCTCTCTCTCAATAAGCCATTATATTTGTTTTTCCTTTTCCTTTCGGTCCTGCTCCTTCTAAATCCTTTGTTCGTTGATTGTCCTTTTCCTTCTCCCTCCCAGCTTTAGTTTG

Coding sequence (CDS)

ATGGCCATGCGATCGGTGTTCGGTCGTTCCTCTCTGACTCCGTCCACGGTGCGTGCCGCCGGCGTCGGTGGATTCCGATTCCTCTCGGACGGAAAAGGTCGAGTACTCAGTGAGGAGGAGCGTGCTGCTGAGAACGTCTACATTCAGTTGTTGGATTCTCGTACGGACTTGACTGAGATCGAAGTTACTGCTTCTAAAATGGAAAGAGAGAGACTGGAGAAGCAAAGGCTTAAGGCAGAGAAAGAAAGGGCCGAGAAGAAGGAAGAACAGTCGGAGAAGAAACTTGTTAGCGCCACTCAAGTTCAAGATCAGTTTATGATATGTTCTGTTGATAAAAGAAACGTGAAGGGACCCAGTAGATGGTGGTGGCTCCTCTGCAAGTCTGGGAAGATCTGCGTTGGAGTTTGGCCACAAGGAATAAAATGTGAGATTCCTCACCCCATCACCGCTTTTCTGTAA

Protein sequence

MAMRSVFGRSSLTPSTVRAAGVGGFRFLSDGKGRVLSEEERAAENVYIQLLDSRTDLTEIEVTASKMERERLEKQRLKAEKERAEKKEEQSEKKLVSATQVQDQFMICSVDKRNVKGPSRWWWLLCKSGKICVGVWPQGIKCEIPHPITAFL
BLAST of Cp4.1LG01g24970 vs. TrEMBL
Match: A0A0A0K8J7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G046230 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 3.1e-18
Identity = 66/94 (70.21%), Postives = 70/94 (74.47%), Query Frame = 1

Query: 1  MAMRSVFGRSSLTPSTVRAAGVGGFRFLSDGKGRVLSEEERAAENVYIQLLDSRTDLTEI 60
          MAMRSV  RSSLT ST RA   GGFRFLSDGKGRVLSEEERAAENVYIQ           
Sbjct: 1  MAMRSVLTRSSLTTSTARA---GGFRFLSDGKGRVLSEEERAAENVYIQ----------- 60

Query: 61 EVTASKMERERLEKQRLKAEKERAEKKEEQSEKK 95
               KMERERLEK RLKAEKE+A+K++EQSEKK
Sbjct: 61 -----KMERERLEKLRLKAEKEKAQKEKEQSEKK 75

BLAST of Cp4.1LG01g24970 vs. TrEMBL
Match: A0A068TUJ1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00029641001 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 7.0e-10
Identity = 51/97 (52.58%), Postives = 61/97 (62.89%), Query Frame = 1

Query: 1  MAMRSVFGRSSL---TPSTVRAAGVGGFRFLSDGKGRVLSEEERAAENVYIQLLDSRTDL 60
          MAMRSV  RS L      T R++ +  FR+ +D KGRVLSEEERA ENVYIQ        
Sbjct: 1  MAMRSVVLRSGLGRLMEGTPRSSSISAFRYFADDKGRVLSEEERAKENVYIQ-------- 60

Query: 61 TEIEVTASKMERERLEKQRLKAEKERAEKKEEQSEKK 95
                  K ERERLEKQ+LKAEKE+ + + E+SEKK
Sbjct: 61 --------KWERERLEKQKLKAEKEKEKAEREKSEKK 81

BLAST of Cp4.1LG01g24970 vs. TrEMBL
Match: B9HVV9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s24670g PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.5e-09
Identity = 48/95 (50.53%), Postives = 59/95 (62.11%), Query Frame = 1

Query: 1  MAMRSVFGRSSLTPSTVRAAGVGGFRFLSDGKGRVLSEEERAAENVYIQLLDSRTDLTEI 60
          MA RS   R SL       +  G  R+ SDGKGRVLSEEERAAENVYIQ           
Sbjct: 1  MATRSALSRLSLITIRSMKSTRGATRYFSDGKGRVLSEEERAAENVYIQ----------- 60

Query: 61 EVTASKMERERLEKQRLKAEKERAEKKEEQSEKKL 96
               KMERERLEK +LK EKE+AEK+++ ++K++
Sbjct: 61 -----KMERERLEKLKLKQEKEKAEKEKQGADKRI 79

BLAST of Cp4.1LG01g24970 vs. TrEMBL
Match: V4TF21_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017346mg PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.5e-09
Identity = 51/94 (54.26%), Postives = 58/94 (61.70%), Query Frame = 1

Query: 1  MAMRSVFGRSSLTPSTVRAAGVGGFRFLSDGKGRVLSEEERAAENVYIQLLDSRTDLTEI 60
          MAMRS   R  +T S     G    R+ SD KGRVLSEEERAAENVYIQ           
Sbjct: 1  MAMRSALCRLKVTRSMESTRGAT--RYFSDDKGRVLSEEERAAENVYIQ----------- 60

Query: 61 EVTASKMERERLEKQRLKAEKERAEKKEEQSEKK 95
               KMERERLEKQR KAEKE+ +K++E +EKK
Sbjct: 61 -----KMERERLEKQRKKAEKEKLQKEKEGAEKK 76

BLAST of Cp4.1LG01g24970 vs. TrEMBL
Match: A0A067E0M2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034789mg PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 4.5e-09
Identity = 51/94 (54.26%), Postives = 58/94 (61.70%), Query Frame = 1

Query: 1  MAMRSVFGRSSLTPSTVRAAGVGGFRFLSDGKGRVLSEEERAAENVYIQLLDSRTDLTEI 60
          MAMRS   R  +T S     G    R+ SD KGRVLSEEERAAENVYIQ           
Sbjct: 1  MAMRSALCRLKVTRSMESTRGAT--RYFSDDKGRVLSEEERAAENVYIQ----------- 60

Query: 61 EVTASKMERERLEKQRLKAEKERAEKKEEQSEKK 95
               KMERERLEKQR KAEKE+ +K++E +EKK
Sbjct: 61 -----KMERERLEKQRKKAEKEKLQKEKEGAEKK 76

BLAST of Cp4.1LG01g24970 vs. NCBI nr
Match: gi|659113500|ref|XP_008456607.1| (PREDICTED: uncharacterized protein LOC103496516 [Cucumis melo])

HSP 1 Score: 111.7 bits (278), Expect = 1.1e-21
Identity = 69/94 (73.40%), Postives = 72/94 (76.60%), Query Frame = 1

Query: 1  MAMRSVFGRSSLTPSTVRAAGVGGFRFLSDGKGRVLSEEERAAENVYIQLLDSRTDLTEI 60
          MAMRSV  RSSLTP T RAAG GGFRFLSDGKGRVLSEEERAAENVYIQ           
Sbjct: 1  MAMRSVLSRSSLTPCTARAAGAGGFRFLSDGKGRVLSEEERAAENVYIQ----------- 60

Query: 61 EVTASKMERERLEKQRLKAEKERAEKKEEQSEKK 95
               KMERERLEK RLKAEKE+AEK++EQSEKK
Sbjct: 61 -----KMERERLEKLRLKAEKEKAEKEKEQSEKK 78

BLAST of Cp4.1LG01g24970 vs. NCBI nr
Match: gi|449446299|ref|XP_004140909.1| (PREDICTED: uncharacterized protein At2g27730, mitochondrial [Cucumis sativus])

HSP 1 Score: 99.8 bits (247), Expect = 4.5e-18
Identity = 66/94 (70.21%), Postives = 70/94 (74.47%), Query Frame = 1

Query: 1  MAMRSVFGRSSLTPSTVRAAGVGGFRFLSDGKGRVLSEEERAAENVYIQLLDSRTDLTEI 60
          MAMRSV  RSSLT ST RA   GGFRFLSDGKGRVLSEEERAAENVYIQ           
Sbjct: 1  MAMRSVLTRSSLTTSTARA---GGFRFLSDGKGRVLSEEERAAENVYIQ----------- 60

Query: 61 EVTASKMERERLEKQRLKAEKERAEKKEEQSEKK 95
               KMERERLEK RLKAEKE+A+K++EQSEKK
Sbjct: 61 -----KMERERLEKLRLKAEKEKAQKEKEQSEKK 75

BLAST of Cp4.1LG01g24970 vs. NCBI nr
Match: gi|661896732|emb|CDO99921.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 72.0 bits (175), Expect = 1.0e-09
Identity = 51/97 (52.58%), Postives = 61/97 (62.89%), Query Frame = 1

Query: 1  MAMRSVFGRSSL---TPSTVRAAGVGGFRFLSDGKGRVLSEEERAAENVYIQLLDSRTDL 60
          MAMRSV  RS L      T R++ +  FR+ +D KGRVLSEEERA ENVYIQ        
Sbjct: 1  MAMRSVVLRSGLGRLMEGTPRSSSISAFRYFADDKGRVLSEEERAKENVYIQ-------- 60

Query: 61 TEIEVTASKMERERLEKQRLKAEKERAEKKEEQSEKK 95
                  K ERERLEKQ+LKAEKE+ + + E+SEKK
Sbjct: 61 --------KWERERLEKQKLKAEKEKEKAEREKSEKK 81

BLAST of Cp4.1LG01g24970 vs. NCBI nr
Match: gi|1009165502|ref|XP_015901073.1| (PREDICTED: uncharacterized protein At2g27730, mitochondrial-like [Ziziphus jujuba])

HSP 1 Score: 70.5 bits (171), Expect = 2.9e-09
Identity = 53/95 (55.79%), Postives = 61/95 (64.21%), Query Frame = 1

Query: 1  MAMRS-VFGRSSLTPSTVRAAGVGGFRFLSDGKGRVLSEEERAAENVYIQLLDSRTDLTE 60
          MAMRS V  R+ LT +     G    R+ SD KGRVLSEEERAAEN+YIQ          
Sbjct: 1  MAMRSLVLSRAVLTRAMESTRGPT--RYFSDSKGRVLSEEERAAENIYIQ---------- 60

Query: 61 IEVTASKMERERLEKQRLKAEKERAEKKEEQSEKK 95
                KMERERLEKQ+LKAEKE+AEK++E S KK
Sbjct: 61 ------KMERERLEKQKLKAEKEKAEKEKENSGKK 77

BLAST of Cp4.1LG01g24970 vs. NCBI nr
Match: gi|1009119695|ref|XP_015876519.1| (PREDICTED: uncharacterized protein At2g27730, mitochondrial-like [Ziziphus jujuba])

HSP 1 Score: 70.1 bits (170), Expect = 3.8e-09
Identity = 50/94 (53.19%), Postives = 61/94 (64.89%), Query Frame = 1

Query: 1  MAMRSVFGRSSLTPSTVRAAGVGGFRFLSDGKGRVLSEEERAAENVYIQLLDSRTDLTEI 60
          MAMRS+    ++   T+ +   G  R+ SD KGRVLSEEERAAEN+YIQ           
Sbjct: 1  MAMRSLVLSRAVLTRTMESTR-GPTRYFSDSKGRVLSEEERAAENIYIQ----------- 60

Query: 61 EVTASKMERERLEKQRLKAEKERAEKKEEQSEKK 95
               KMERERLEKQ+LKAEKE+AEK++E S KK
Sbjct: 61 -----KMERERLEKQKLKAEKEKAEKEKENSGKK 77

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K8J7_CUCSA3.1e-1870.21Uncharacterized protein OS=Cucumis sativus GN=Csa_6G046230 PE=4 SV=1[more]
A0A068TUJ1_COFCA7.0e-1052.58Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00029641001 PE=4 SV=1[more]
B9HVV9_POPTR3.5e-0950.53Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s24670g PE=4 SV=1[more]
V4TF21_9ROSI4.5e-0954.26Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017346mg PE=4 SV=1[more]
A0A067E0M2_CITSI4.5e-0954.26Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034789mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
gi|659113500|ref|XP_008456607.1|1.1e-2173.40PREDICTED: uncharacterized protein LOC103496516 [Cucumis melo][more]
gi|449446299|ref|XP_004140909.1|4.5e-1870.21PREDICTED: uncharacterized protein At2g27730, mitochondrial [Cucumis sativus][more]
gi|661896732|emb|CDO99921.1|1.0e-0952.58unnamed protein product [Coffea canephora][more]
gi|1009165502|ref|XP_015901073.1|2.9e-0955.79PREDICTED: uncharacterized protein At2g27730, mitochondrial-like [Ziziphus jujub... [more]
gi|1009119695|ref|XP_015876519.1|3.8e-0953.19PREDICTED: uncharacterized protein At2g27730, mitochondrial-like [Ziziphus jujub... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043086 negative regulation of catalytic activity
biological_process GO:0045980 negative regulation of nucleotide metabolic process
biological_process GO:0032780 negative regulation of ATPase activity
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0004857 enzyme inhibitor activity
molecular_function GO:0042030 ATPase inhibitor activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g24970.1Cp4.1LG01g24970.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 60..101
scor
NoneNo IPR availablePANTHERPTHR33878FAMILY NOT NAMEDcoord: 66..144
score: 5.6E-28coord: 2..49
score: 5.6
NoneNo IPR availablePANTHERPTHR33878:SF2SUBFAMILY NOT NAMEDcoord: 66..144
score: 5.6E-28coord: 2..49
score: 5.6

The following gene(s) are paralogous to this gene:

None