CmoCh04G026310 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G026310
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionF1F0-ATPase inhibitor protein
LocationCmo_Chr04 : 19157086 .. 19159452 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAACCGAATAAACCTTGCTGTTACTCTCTCGAAGATTTTACTTCACAGAACGCAAATGGCCATGCGATCGGTGTTCGGTCGTTCCTCTCTGACTCCGTCCACGGTGCGTACCGCCGGCGTCGGTGGATTCCGATTCCTCTCAGACGGAAAAGGTCGAGTTCTCAGTGAGGAGGAGCGTGCTGCTGAGAACGTCTACATTCAGGTTGAATTAATAGTTTCGAATGTTCGAGAAAAAATGAGTTGAAAAGTAGTAGTAATTCTAGTATCGATCTGCTTTGTTGAATGTTCAGTTGTTGGATTCTTGTATGGACTTGAGTGAGATCGAAGTTACTGCTTCTGTACTTTCTTTTTGTGCGAGGAGTTGTGATCTACGATTTAGTTGTAGGAGTTCGATAATCAATCTGTTTGATCAAACGTTCACTCGTTAGAAACTGAAATAAATATGGACTGGAGTTAGGGAATATTTACTGTTTATATGAGATGGTATTTTCTTTCTGTGCGAGGAGTTTGTGTTTATTCGATTTTTAGTAGGAGTCCAATCATCAATCTGCTTCATCGAATGCTCGCTTGTTCAAAACTAAAATATAAATAGACTGGGATGAGATTGAAGATACTATTTATGTTGGCTTGTACTTTCTTCTTGCTCGAGGATTTTGTGTTCTCCAATTTGTAGTTATCGTTTTGCTAATGTTTGTGTAGAAAATGGAAAGAGAGAGACTGGAGAAGCAAAGGCTTAAGGCAGAGAAAGAAAGGGCCGAGAAGAAGGAAGAACAGTCGGAGAAGGTAATTCATTACTGGCATTGTTTTCATTAAAATTGGCTGCTGCCAAATATTTGTTAGTCGATCTGTGGTAAGAGAGGCTATGACTAACCGTATTTTGTGATCGTTGCAACTTTTATATATAAATCTTTACGGTCTTGTGGGATCCATCATCCCTAATAGTTAGTTGACAACTCTTTGATTGTGTAGTTTGTAGTTTCCATGGGCTATTTCTTCGATGTTAAATTTTGATTTCTTAAACCTATGTGGGGATTGAGCCCAAGTGTCAGAAATTGATAAAATAAAAAAGAAACCTATGTGATTTTTTATTTTTTTAAAAAGAATTATGGAAAAAATGGAGGTGAAGTCACGCCGTTAGATCTTAGAACAAAGAAGTGTTCAGGAACGTGGTTGATAAGAAAAATGACATCCTTCACCAAATTGATCAGATTGATATGTTGGATGAACAAGGGATTGTCCAAACGCAGCAAAAAGAAGAGTGCGTTAGAGCTAACACCAAATGAGCAGAGATATTTGAGACAGAAATGCAAAATTAAATGGTTGAATGAAGGGGATGAGAGTGCTTCCTTCTTCCACGGATGGGCTTCAGCTATGAAAAATAGAGTCTGTTTATCCATTCTGGAAATTGAAGATGAACGATTTTTATCTACAGAAACAGAGACTGAAGAGAATATTTTAGGCTTTTATAGAAAGTTGTATCCTGATGATAGAGACCCTCAGTTCACTATTGAAGGGATTGATTGGACTTTGATCGATAGTCAAAGAACGTCGAGATTAGAAAGACCTTGAAGTCATCAGATCTAGTGCAAGTGTTCCCAGATTCTCAAAGCATTTCAGAATATAGGCAGTCTCAAGTCCCTAGGACCTGATGGAATAACGGGAGAGTTTGGAACACCTTGAAGTCATCAGATCTAGTGCAAGTGTTCCCAGACTTTAGCTAATATGGTCATGTATATTATAGAACACCATGTATATATATAAAGAAGCTAATGCATCATTGCGGTTTCTGTGGTAATTACGCGTGTTCATAGCTGGTTGGCATTTTAAATGGACGCCTGCTATCTAGTCCTCATATCTTCGTTTCTGCTACTTTCACCTGTTATTCGTAGAAACTTGTTAGCGCCACTCAAGTTCAAGATCAGTTTATGATATGTTCTGTTGATAAAAGGTGCAAACTAGGATGCTGTTTTTGGACGTTTGGAGTTTTTATCATCCCGAAGACCCTTTCTGTAAATTATATTAATTCAATGGGTTCTTTAAACTAACAAGTCCAGGAGGGAAATTGTAGTGAACTTTCTTTTTTTCAGGTGTGCAGTGTGCTGAATCACCTTTTTTAACATGTTTCTAATTATCACTTTATACTTCTAGAAGATGACAAACTTTTTCTACTTTTTTCTGTAACTACTAAGATTAGTCAAACAAATAAATAAGTACAATTGATGATAAAGTTCATTTCACTATATCCACCAAGGGAAAAGTTGCATCATTGTCAATCAAATATTTGAATGCCAGTTTTGTTGTTCTTATTTTAGAAATTGTGTTTATCCTTTGCTTCTCATTTGCAGAAACGTGACGGGACCCAGTAG

mRNA sequence

TGAACCGAATAAACCTTGCTGTTACTCTCTCGAAGATTTTACTTCACAGAACGCAAATGGCCATGCGATCGGTGTTCGGTCGTTCCTCTCTGACTCCGTCCACGGTGCGTACCGCCGGCGTCGGTGGATTCCGATTCCTCTCAGACGGAAAAGGTCGAGTTCTCAGTGAGGAGGAGCGTGCTGCTGAGAACGTCTACATTCAGAAAATGGAAAGAGAGAGACTGGAGAAGCAAAGGCTTAAGGCAGAGAAAGAAAGGGCCGAGAAGAAGGAAGAACAGTCGGAGAAGAAACGTGACGGGACCCAGTAG

Coding sequence (CDS)

ATGGCCATGCGATCGGTGTTCGGTCGTTCCTCTCTGACTCCGTCCACGGTGCGTACCGCCGGCGTCGGTGGATTCCGATTCCTCTCAGACGGAAAAGGTCGAGTTCTCAGTGAGGAGGAGCGTGCTGCTGAGAACGTCTACATTCAGAAAATGGAAAGAGAGAGACTGGAGAAGCAAAGGCTTAAGGCAGAGAAAGAAAGGGCCGAGAAGAAGGAAGAACAGTCGGAGAAGAAACGTGACGGGACCCAGTAG
BLAST of CmoCh04G026310 vs. TrEMBL
Match: A0A0A0K8J7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G046230 PE=4 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 9.7e-22
Identity = 68/83 (81.93%), Postives = 73/83 (87.95%), Query Frame = 1

Query: 1  MAMRSVFGRSSLTPSTVRTAGVGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKQR 60
          MAMRSV  RSSLT ST R    GGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEK R
Sbjct: 1  MAMRSVLTRSSLTTSTARA---GGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKLR 60

Query: 61 LKAEKERAEKKEEQSEKKRDGTQ 84
          LKAEKE+A+K++EQSEKK +GTQ
Sbjct: 61 LKAEKEKAQKEKEQSEKKHEGTQ 80

BLAST of CmoCh04G026310 vs. TrEMBL
Match: B9HVV9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s24670g PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 5.3e-12
Identity = 50/83 (60.24%), Postives = 62/83 (74.70%), Query Frame = 1

Query: 1  MAMRSVFGRSSLTPSTVRTAGVGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKQR 60
          MA RS   R SL       +  G  R+ SDGKGRVLSEEERAAENVYIQKMERERLEK +
Sbjct: 1  MATRSALSRLSLITIRSMKSTRGATRYFSDGKGRVLSEEERAAENVYIQKMERERLEKLK 60

Query: 61 LKAEKERAEKKEEQSEKKRDGTQ 84
          LK EKE+AEK+++ ++K+ +G+Q
Sbjct: 61 LKQEKEKAEKEKQGADKRIEGSQ 83

BLAST of CmoCh04G026310 vs. TrEMBL
Match: A0A068TUJ1_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00029641001 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 5.3e-12
Identity = 51/83 (61.45%), Postives = 62/83 (74.70%), Query Frame = 1

Query: 1  MAMRSVFGRSSL---TPSTVRTAGVGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLE 60
          MAMRSV  RS L      T R++ +  FR+ +D KGRVLSEEERA ENVYIQK ERERLE
Sbjct: 1  MAMRSVVLRSGLGRLMEGTPRSSSISAFRYFADDKGRVLSEEERAKENVYIQKWERERLE 60

Query: 61 KQRLKAEKERAEKKEEQSEKKRD 81
          KQ+LKAEKE+ + + E+SEKK +
Sbjct: 61 KQKLKAEKEKEKAEREKSEKKAE 83

BLAST of CmoCh04G026310 vs. TrEMBL
Match: A0A067E0M2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034789mg PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 9.1e-12
Identity = 52/80 (65.00%), Postives = 60/80 (75.00%), Query Frame = 1

Query: 1  MAMRSVFGRSSLTPSTVRTAGVGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKQR 60
          MAMRS   R  +T S   T G    R+ SD KGRVLSEEERAAENVYIQKMERERLEKQR
Sbjct: 1  MAMRSALCRLKVTRSMESTRGAT--RYFSDDKGRVLSEEERAAENVYIQKMERERLEKQR 60

Query: 61 LKAEKERAEKKEEQSEKKRD 81
           KAEKE+ +K++E +EKK +
Sbjct: 61 KKAEKEKLQKEKEGAEKKTE 78

BLAST of CmoCh04G026310 vs. TrEMBL
Match: V4TF21_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017346mg PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 9.1e-12
Identity = 52/80 (65.00%), Postives = 60/80 (75.00%), Query Frame = 1

Query: 1  MAMRSVFGRSSLTPSTVRTAGVGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKQR 60
          MAMRS   R  +T S   T G    R+ SD KGRVLSEEERAAENVYIQKMERERLEKQR
Sbjct: 1  MAMRSALCRLKVTRSMESTRGAT--RYFSDDKGRVLSEEERAAENVYIQKMERERLEKQR 60

Query: 61 LKAEKERAEKKEEQSEKKRD 81
           KAEKE+ +K++E +EKK +
Sbjct: 61 KKAEKEKLQKEKEGAEKKTE 78

BLAST of CmoCh04G026310 vs. TAIR10
Match: AT5G04750.1 (AT5G04750.1 F1F0-ATPase inhibitor protein, putative)

HSP 1 Score: 47.8 bits (112), Expect = 3.9e-06
Identity = 35/64 (54.69%), Postives = 47/64 (73.44%), Query Frame = 1

Query: 15 STVRTAGVGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKQRLKAEKERAEKKEEQ 74
          S V T G    R+ SD KGRVLSEEERA E++YIQKMERERLEK++ K E+++ + ++  
Sbjct: 27 SVVSTRGPA-IRYFSDDKGRVLSEEERAKESMYIQKMERERLEKKK-KLEQDKLDGEKGS 86

Query: 75 SEKK 79
          + KK
Sbjct: 87 ANKK 88

BLAST of CmoCh04G026310 vs. NCBI nr
Match: gi|659113500|ref|XP_008456607.1| (PREDICTED: uncharacterized protein LOC103496516 [Cucumis melo])

HSP 1 Score: 122.5 bits (306), Expect = 3.5e-25
Identity = 71/83 (85.54%), Postives = 75/83 (90.36%), Query Frame = 1

Query: 1  MAMRSVFGRSSLTPSTVRTAGVGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKQR 60
          MAMRSV  RSSLTP T R AG GGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEK R
Sbjct: 1  MAMRSVLSRSSLTPCTARAAGAGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKLR 60

Query: 61 LKAEKERAEKKEEQSEKKRDGTQ 84
          LKAEKE+AEK++EQSEKK +GTQ
Sbjct: 61 LKAEKEKAEKEKEQSEKKHEGTQ 83

BLAST of CmoCh04G026310 vs. NCBI nr
Match: gi|449446299|ref|XP_004140909.1| (PREDICTED: uncharacterized protein At2g27730, mitochondrial [Cucumis sativus])

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-21
Identity = 68/83 (81.93%), Postives = 73/83 (87.95%), Query Frame = 1

Query: 1  MAMRSVFGRSSLTPSTVRTAGVGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKQR 60
          MAMRSV  RSSLT ST R    GGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEK R
Sbjct: 1  MAMRSVLTRSSLTTSTARA---GGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKLR 60

Query: 61 LKAEKERAEKKEEQSEKKRDGTQ 84
          LKAEKE+A+K++EQSEKK +GTQ
Sbjct: 61 LKAEKEKAQKEKEQSEKKHEGTQ 80

BLAST of CmoCh04G026310 vs. NCBI nr
Match: gi|1009119695|ref|XP_015876519.1| (PREDICTED: uncharacterized protein At2g27730, mitochondrial-like [Ziziphus jujuba])

HSP 1 Score: 82.4 bits (202), Expect = 4.0e-13
Identity = 56/83 (67.47%), Postives = 65/83 (78.31%), Query Frame = 1

Query: 1  MAMRS-VFGRSSLTPSTVRTAGVGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKQ 60
          MAMRS V  R+ LT +   T G    R+ SD KGRVLSEEERAAEN+YIQKMERERLEKQ
Sbjct: 1  MAMRSLVLSRAVLTRTMESTRGPT--RYFSDSKGRVLSEEERAAENIYIQKMERERLEKQ 60

Query: 61 RLKAEKERAEKKEEQSEKKRDGT 83
          +LKAEKE+AEK++E S KK +GT
Sbjct: 61 KLKAEKEKAEKEKENSGKKPEGT 81

BLAST of CmoCh04G026310 vs. NCBI nr
Match: gi|1009165502|ref|XP_015901073.1| (PREDICTED: uncharacterized protein At2g27730, mitochondrial-like [Ziziphus jujuba])

HSP 1 Score: 82.4 bits (202), Expect = 4.0e-13
Identity = 56/83 (67.47%), Postives = 65/83 (78.31%), Query Frame = 1

Query: 1  MAMRS-VFGRSSLTPSTVRTAGVGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKQ 60
          MAMRS V  R+ LT +   T G    R+ SD KGRVLSEEERAAEN+YIQKMERERLEKQ
Sbjct: 1  MAMRSLVLSRAVLTRAMESTRGPT--RYFSDSKGRVLSEEERAAENIYIQKMERERLEKQ 60

Query: 61 RLKAEKERAEKKEEQSEKKRDGT 83
          +LKAEKE+AEK++E S KK +GT
Sbjct: 61 KLKAEKEKAEKEKENSGKKPEGT 81

BLAST of CmoCh04G026310 vs. NCBI nr
Match: gi|224113431|ref|XP_002316494.1| (hypothetical protein POPTR_0010s24670g [Populus trichocarpa])

HSP 1 Score: 78.2 bits (191), Expect = 7.6e-12
Identity = 50/83 (60.24%), Postives = 62/83 (74.70%), Query Frame = 1

Query: 1  MAMRSVFGRSSLTPSTVRTAGVGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKQR 60
          MA RS   R SL       +  G  R+ SDGKGRVLSEEERAAENVYIQKMERERLEK +
Sbjct: 1  MATRSALSRLSLITIRSMKSTRGATRYFSDGKGRVLSEEERAAENVYIQKMERERLEKLK 60

Query: 61 LKAEKERAEKKEEQSEKKRDGTQ 84
          LK EKE+AEK+++ ++K+ +G+Q
Sbjct: 61 LKQEKEKAEKEKQGADKRIEGSQ 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K8J7_CUCSA9.7e-2281.93Uncharacterized protein OS=Cucumis sativus GN=Csa_6G046230 PE=4 SV=1[more]
B9HVV9_POPTR5.3e-1260.24Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s24670g PE=4 SV=1[more]
A0A068TUJ1_COFCA5.3e-1261.45Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00029641001 PE=4 SV=1[more]
A0A067E0M2_CITSI9.1e-1265.00Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g034789mg PE=4 SV=1[more]
V4TF21_9ROSI9.1e-1265.00Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017346mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G04750.13.9e-0654.69 F1F0-ATPase inhibitor protein, putative[more]
Match NameE-valueIdentityDescription
gi|659113500|ref|XP_008456607.1|3.5e-2585.54PREDICTED: uncharacterized protein LOC103496516 [Cucumis melo][more]
gi|449446299|ref|XP_004140909.1|1.4e-2181.93PREDICTED: uncharacterized protein At2g27730, mitochondrial [Cucumis sativus][more]
gi|1009119695|ref|XP_015876519.1|4.0e-1367.47PREDICTED: uncharacterized protein At2g27730, mitochondrial-like [Ziziphus jujub... [more]
gi|1009165502|ref|XP_015901073.1|4.0e-1367.47PREDICTED: uncharacterized protein At2g27730, mitochondrial-like [Ziziphus jujub... [more]
gi|224113431|ref|XP_002316494.1|7.6e-1260.24hypothetical protein POPTR_0010s24670g [Populus trichocarpa][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043086 negative regulation of catalytic activity
biological_process GO:0045980 negative regulation of nucleotide metabolic process
biological_process GO:0032780 negative regulation of ATPase activity
biological_process GO:0008150 biological_process
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005575 cellular_component
molecular_function GO:0004857 enzyme inhibitor activity
molecular_function GO:0042030 ATPase inhibitor activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G026310.1CmoCh04G026310.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 44..81
scor
NoneNo IPR availablePANTHERPTHR33878FAMILY NOT NAMEDcoord: 2..83
score: 2.1
NoneNo IPR availablePANTHERPTHR33878:SF2SUBFAMILY NOT NAMEDcoord: 2..83
score: 2.1

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh04G026310CmoCh15G005330Cucurbita moschata (Rifu)cmocmoB262