Cp4.1LG01g24320 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g24320
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Descriptionubiquitin-like protein 5
LocationCp4.1LG01 : 19026375 .. 19029083 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGGTTTTCCATGGCGGTAGAAATATATTATAAAAAATGAACGCGTACGAAAATTCTCTCTTTACTTTGGAATTCTGCTCTGTTGAACTCTGAGACGACCTAGGGTTTTACTTTCTTGGGGGAAAGAAGAAGAGGAAGAAGAAGAAGAAGATGATCGAGGTGGTGCTGAACGATCGTCTGGGGAAGAAGGTGAGAGTGAAGTGCAACGAGGACGACACCATCGGCGACTTGAAGAAGCTTGTGGCTGCTCAGACTGGGACTAGAGCCGAGAAGATTCGGATTCAGAAATGGTACAATATCTACAAGGATCATATTACTCTGAGGGATTACGAAGTCCACGATGGCATGGGCCTTGAACTCTACTACAATTAAGTAATTTTCTGATCGCTCTGGATATTTTATTTTTGTATGGAATGAAGTTTATTTCTTTTTATCATGTTGGATTTTTCCTGGAACTTTGTGTTGAAGGTTATGATTTTTGAGATTTTGATGTTCGAGTCCTACTCCGTTATGAAATTAATGATTCCATCCATGAATTTTGAACTGGATAAAGAGAGAAAGTGTGGTATTTTTATAATCTTGTTTGATAGCCTTTTAGGGCGACGTTTTGTTGCGGTTATTCAACTCTGGTTGTTTAGAGTAGAGATGTAAAAATAATCGAGAACCTTGCCAATTTTTGTTATAATCTGTCTTGCAGTAGAGATTTTAATATCTTCATCTTGTAGATTTTCCTCGTACTTCCAATTCCTGTTACTGTAAAATGCCAATTGAAGTTTGATGATGACAGAGTCTAATGGAGAAAGAACACTTTTAATGTGAAAGTACATATAGTTAACAATTTTCTTTTTTGTGGATAAGTATTAATTTATGATTGATTATGCATGCTTTAGCTGTTGCAGATTAGATATCAAAGGAATTGGTGAAAACAAAGGTGCTAGAATCTAGATGAATCTTGTGTTGTTGTAGCAATTTGCTCATTTCTCTATCTATGTATCCATTATGTCTTTATTTGGAGAATGGTTCATTCTAGGTGACATAGGAAGTCCTTTGTAGAGTTCCCAAAGTCAAGACGGCTAAGTGGAAAGCTTTTGGAAAAATAAATTTTTGACTTCGTCCATGTAGGGGACTGCTTCTGAATTAAGTTGCGAAGTCTCCTGCTCTTGTTCAACTAGTTCTTTCATAACAATTCCAAGTCATTTAAAGATGAAATCATGGATTGACCATGGTGTCTTATATAACCATGTTGGATCAAATAATGAGTCATTCATCATCCATGATCGATAATCTAATGGATCTTGCAAAACCGTTTTTACCTGATAAAAGTTATTGGTGGGAAGGCTTTCTTTATATCCTTGTACCTTACCAATGAAATTCATTTACCTCCTTATCTTTTTGTATGGTGGAGTTATCAGTAAGCTTGCTCGTTGCAACCTTTAATCAACAGTTTCCTCAAAACATCCACCCGTTCAGGCCTATTAGAAAACATAATAACGAATCATCCTGTATTTATCCCCTCAAGGTTTTCACTCTCCCGAAAGGTTTGCCATTTAATAACATTGAAAACTGCATCTTTGCTGGTACAACTTAATATTCACTTATGCCATGTTTCACTAAAGCCATTTTTCTTGAAACCACATCAAGGAAATGCCAGAAAGTAGGTAAAAATTTCTGCCATATGAACCAGATGAAGATCATCTGTGAGCCACACACGAACAATGTGGAGGGGATATTTTTCTGGCAACTATTTTGTGCCAAATAGAGACAAGTGGGTGGGGAAAGTTCTTCTAAATGCCTCAAACGCTGATTTACAGTTAGAATTCGTTATCCCTTACTTTCTCTCCCTCTCTCCCTGATTTGGAGATAACTTCACCCCTCCAAATGGCTAAACTTGTGAGGATTTGCAACAAATAGAGAAATCTTAGTCAAAATTCCATTTCTAAATCTCTTTCAAAAAAGAATCAAAGCACTCTAAACTATTGGGACACTAGGACTGGTCGATTGCAACTCTACTTGGAAAGAAAATTTCTTAAGGAGGTGAAGTTTTTCTTTTGGACTCTTCATTTAGGAAGCCTTACTGGATGAATGTGTTCTCTTCTAGTTAAGAACACAACTACATATGGTTGGTATCATCGATTATTTGCCTGGTCTGCGGTCAAATATTGCATTGAACTCCTTTCATTAGCATTATAATGATATTTTATGGCATGTATCAGGCTTAAGATACTACGCATGGTTGCTTTCCACTTGGAAAAAGTTGTCTTGTACATGGTCGCTGATTTTGCCTGTTTTGTTCACTTGATGCAGGGCATGGAAAGCCATACGTGGGCTTTGCTTTCACTCTCTCGTTAGCCAGCTCAATGATGTGGTACGGGGTTCCCTGTTTAATTTGTATTATAATAAGCATATATTATTATGACTGTTTCAGAATCAAACTCGCAAGTTTCATGTAATGCAATCAAACTGCTTATTCGGTGATATTATGTGTGGTAACTTCTATTATATTTATGTTCTAAGGCCTGTTTGGTTTTGTGTTTTCATTTTGAAAAAACTATATAGACGACAATGGAACAATATGGTCCTAGAGATGAACTGTCATTCTCGATCCTATGATTTTTTCTATTACTTTCCTTGTTGCCTCATTTATTTGAATAATTAGGATGGAGGCCACAGAATCATTGTTTGAAGATTCGAATTCTGTCTGCAAATGAA

mRNA sequence

CGGGTTTTCCATGGCGGTAGAAATATATTATAAAAAATGAACGCGTACGAAAATTCTCTCTTTACTTTGGAATTCTGCTCTGTTGAACTCTGAGACGACCTAGGGTTTTACTTTCTTGGGGGAAAGAAGAAGAGGAAGAAGAAGAAGAAGATGATCGAGGTGGTGCTGAACGATCGTCTGGGGAAGAAGGTGAGAGTGAAGTGCAACGAGGACGACACCATCGGCGACTTGAAGAAGCTTGTGGCTGCTCAGACTGGGACTAGAGCCGAGAAGATTCGGATTCAGAAATGGTACAATATCTACAAGGATCATATTACTCTGAGGGATTACGAAGTCCACGATGGCATGGGCCTTGAACTCTACTACAATTAAGGCATGGAAAGCCATACGTGGGCTTTGCTTTCACTCTCTCGTTAGCCAGCTCAATGATGTGGTACGGGGTTCCCTGTTTAATTTGTATTATAATAAGCATATATTATTATGACTGTTTCAGAATCAAACTCGCAAGTTTCATGTAATGCAATCAAACTGCTTATTCGGTGATATTATGTGTGGTAACTTCTATTATATTTATGTTCTAAGGCCTGTTTGGTTTTGTGTTTTCATTTTGAAAAAACTATATAGACGACAATGGAACAATATGGTCCTAGAGATGAACTGTCATTCTCGATCCTATGATTTTTTCTATTACTTTCCTTGTTGCCTCATTTATTTGAATAATTAGGATGGAGGCCACAGAATCATTGTTTGAAGATTCGAATTCTGTCTGCAAATGAA

Coding sequence (CDS)

ATGATCGAGGTGGTGCTGAACGATCGTCTGGGGAAGAAGGTGAGAGTGAAGTGCAACGAGGACGACACCATCGGCGACTTGAAGAAGCTTGTGGCTGCTCAGACTGGGACTAGAGCCGAGAAGATTCGGATTCAGAAATGGTACAATATCTACAAGGATCATATTACTCTGAGGGATTACGAAGTCCACGATGGCATGGGCCTTGAACTCTACTACAATTAA

Protein sequence

MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDYEVHDGMGLELYYN
Homology
[Close]
BLAST of Cp4.1LG01g24320 vs. Swiss-Prot
Match: UBL5_ARATH (Ubiquitin-like protein 5 OS=Arabidopsis thaliana GN=UBL5 PE=3 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 1.1e-35
Identity = 70/73 (95.89%), Postives = 73/73 (100.00%), Query Frame = 1 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EVHDGMGLELYYN 74
          E+HDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. Swiss-Prot
Match: UBL5_BOVIN (Ubiquitin-like protein 5 OS=Bos taurus GN=UBL5 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 5.1e-28
Identity = 57/72 (79.17%), Postives = 64/72 (88.89%), Query Frame = 1 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DY
Sbjct: 1  MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 61 EVHDGMGLELYY 73
          E+HDGM LELYY
Sbjct: 61 EIHDGMNLELYY 72

[Close]
BLAST of Cp4.1LG01g24320 vs. Swiss-Prot
Match: UBL5_PSAOB (Ubiquitin-like protein 5 OS=Psammomys obesus GN=UBL5 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 5.1e-28
Identity = 57/72 (79.17%), Postives = 64/72 (88.89%), Query Frame = 1 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DY
Sbjct: 1  MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 61 EVHDGMGLELYY 73
          E+HDGM LELYY
Sbjct: 61 EIHDGMNLELYY 72

[Close]
BLAST of Cp4.1LG01g24320 vs. Swiss-Prot
Match: UBL5_MOUSE (Ubiquitin-like protein 5 OS=Mus musculus GN=Ubl5 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 5.1e-28
Identity = 57/72 (79.17%), Postives = 64/72 (88.89%), Query Frame = 1 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DY
Sbjct: 1  MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 61 EVHDGMGLELYY 73
          E+HDGM LELYY
Sbjct: 61 EIHDGMNLELYY 72

[Close]
BLAST of Cp4.1LG01g24320 vs. Swiss-Prot
Match: UBL5_MESAU (Ubiquitin-like protein 5 OS=Mesocricetus auratus GN=UBL5 PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 5.1e-28
Identity = 57/72 (79.17%), Postives = 64/72 (88.89%), Query Frame = 1 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DY
Sbjct: 1  MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 61 EVHDGMGLELYY 73
          E+HDGM LELYY
Sbjct: 61 EIHDGMNLELYY 72

[Close]
BLAST of Cp4.1LG01g24320 vs. TrEMBL
Match: A0A078H902_BRANA (BnaA01g24730D protein OS=Brassica napus GN=BnaA01g24730D PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 5.7e-34
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 1 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EVHDGMGLELYYN 74
          E+HDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. TrEMBL
Match: D7MTG3_ARALL (Ubiquitin family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_917558 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 5.7e-34
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 1 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EVHDGMGLELYYN 74
          E+HDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. TrEMBL
Match: M4E4Y0_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 5.7e-34
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 1 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EVHDGMGLELYYN 74
          E+HDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. TrEMBL
Match: A0A0D3ABK7_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea GN=UBL5 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 5.7e-34
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 1 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EVHDGMGLELYYN 74
          E+HDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. TrEMBL
Match: A0A164ZFL5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_019101 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 5.7e-34
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 1 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60

Query: 61 EVHDGMGLELYYN 74
          E+HDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. TAIR10
Match: AT5G42300.1 (AT5G42300.1 ubiquitin-like protein 5)

HSP 1 Score: 149.8 bits (377), Expect = 6.4e-37
Identity = 70/73 (95.89%), Postives = 73/73 (100.00%), Query Frame = 1 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EVHDGMGLELYYN 74
          E+HDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. TAIR10
Match: AT3G45180.1 (AT3G45180.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 145.2 bits (365), Expect = 1.6e-35
Identity = 68/73 (93.15%), Postives = 71/73 (97.26%), Query Frame = 1 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCNE+DTIGDLKKLVAAQTGTR EKIRIQKWYNIYKDHI L+DY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEEDTIGDLKKLVAAQTGTRPEKIRIQKWYNIYKDHIPLKDY 60

Query: 61 EVHDGMGLELYYN 74
          E+HDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. NCBI nr
Match: gi|1021038076|gb|KZM95859.1| (hypothetical protein DCAR_019101 [Daucus carota subsp. sativus])

HSP 1 Score: 151.0 bits (380), Expect = 8.1e-34
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 1 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60

Query: 61 EVHDGMGLELYYN 74
          E+HDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. NCBI nr
Match: gi|672123820|ref|XP_008785280.1| (PREDICTED: ubiquitin-like protein 5 [Phoenix dactylifera])

HSP 1 Score: 151.0 bits (380), Expect = 8.1e-34
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 1 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGT+AEKIRIQKWYNIYKDHITLRDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTKAEKIRIQKWYNIYKDHITLRDY 60

Query: 61 EVHDGMGLELYYN 74
          E+HDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. NCBI nr
Match: gi|297791835|ref|XP_002863802.1| (ubiquitin family protein [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 151.0 bits (380), Expect = 8.1e-34
Identity = 71/73 (97.26%), Postives = 73/73 (100.00%), Query Frame = 1 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITL+DY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EVHDGMGLELYYN 74
          E+HDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]
BLAST of Cp4.1LG01g24320 vs. NCBI nr
Match: gi|77553656|gb|ABA96452.1| (GRF zinc finger family protein [Oryza sativa Japonica Group])

HSP 1 Score: 150.2 bits (378), Expect = 1.4e-33
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 1 

Query: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
           MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTR EKIRIQKWYNIYKDHITLRDY
Sbjct: 206 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYNIYKDHITLRDY 265

Query: 61  EVHDGMGLELYYN 74
           E+HDGMGLELYYN
Sbjct: 266 EIHDGMGLELYYN 278

[Close]
BLAST of Cp4.1LG01g24320 vs. NCBI nr
Match: gi|937940947|dbj|BAT15859.1| (Os12g0143100, partial [Oryza sativa Japonica Group])

HSP 1 Score: 150.2 bits (378), Expect = 1.4e-33
Identity = 71/73 (97.26%), Postives = 72/73 (98.63%), Query Frame = 1 

Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLRDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTR EKIRIQKWYNIYKDHITLRDY
Sbjct: 19 MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRPEKIRIQKWYNIYKDHITLRDY 78

Query: 61 EVHDGMGLELYYN 74
          E+HDGMGLELYYN
Sbjct: 79 EIHDGMGLELYYN 91

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g24320 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UBL5_ARATH1.1e-3595.89Ubiquitin-like protein 5 OS=Arabidopsis thaliana GN=UBL5 PE=3 SV=1[more]
UBL5_BOVIN5.1e-2879.17Ubiquitin-like protein 5 OS=Bos taurus GN=UBL5 PE=3 SV=1[more]
UBL5_PSAOB5.1e-2879.17Ubiquitin-like protein 5 OS=Psammomys obesus GN=UBL5 PE=3 SV=1[more]
UBL5_MOUSE5.1e-2879.17Ubiquitin-like protein 5 OS=Mus musculus GN=Ubl5 PE=1 SV=1[more]
UBL5_MESAU5.1e-2879.17Ubiquitin-like protein 5 OS=Mesocricetus auratus GN=UBL5 PE=3 SV=1[more]
BLAST of Cp4.1LG01g24320 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A078H902_BRANA5.7e-3497.26BnaA01g24730D protein OS=Brassica napus GN=BnaA01g24730D PE=4 SV=1[more]
D7MTG3_ARALL5.7e-3497.26Ubiquitin family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_91755... [more]
M4E4Y0_BRARP5.7e-3497.26Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
A0A0D3ABK7_BRAOL5.7e-3497.26Uncharacterized protein OS=Brassica oleracea var. oleracea GN=UBL5 PE=4 SV=1[more]
A0A164ZFL5_DAUCA5.7e-3497.26Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_019101 PE=4 SV=1[more]
BLAST of Cp4.1LG01g24320 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G42300.16.4e-3795.89 ubiquitin-like protein 5[more]
AT3G45180.11.6e-3593.15 Ubiquitin-like superfamily protein[more]
BLAST of Cp4.1LG01g24320 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|1021038076|gb|KZM95859.1|8.1e-3497.26hypothetical protein DCAR_019101 [Daucus carota subsp. sativus][more]
gi|672123820|ref|XP_008785280.1|8.1e-3497.26PREDICTED: ubiquitin-like protein 5 [Phoenix dactylifera][more]
gi|297791835|ref|XP_002863802.1|8.1e-3497.26ubiquitin family protein [Arabidopsis lyrata subsp. lyrata][more]
gi|77553656|gb|ABA96452.1|1.4e-3397.26GRF zinc finger family protein [Oryza sativa Japonica Group][more]
gi|937940947|dbj|BAT15859.1|1.4e-3397.26Os12g0143100, partial [Oryza sativa Japonica Group][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR000626Ubiquitin_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006464 cellular protein modification process
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0031386 protein tag
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g24320.1Cp4.1LG01g24320.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000626Ubiquitin domainPFAMPF00240ubiquitincoord: 11..70
score: 5.
IPR000626Ubiquitin domainPROFILEPS50053UBIQUITIN_2coord: 2..73
score: 1
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 1..73
score: 4.7
NoneNo IPR availablePANTHERPTHR13042FAMILY NOT NAMEDcoord: 1..73
score: 3.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g24320Cucsa.137660Cucumber (Gy14) v1cgycpeB0372
Cp4.1LG01g24320CmaCh15G004600Cucurbita maxima (Rimu)cmacpeB317
Cp4.1LG01g24320CmaCh04G025720Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g24320CmoCh04G026940Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g24320CmoCh15G004700Cucurbita moschata (Rifu)cmocpeB279
Cp4.1LG01g24320Cla013767Watermelon (97103) v1cpewmB395
Cp4.1LG01g24320Csa6G405880Cucumber (Chinese Long) v2cpecuB462
Cp4.1LG01g24320MELO3C019800Melon (DHL92) v3.5.1cpemeB396
Cp4.1LG01g24320ClCG08G007540Watermelon (Charleston Gray)cpewcgB417
Cp4.1LG01g24320CSPI06G21400Wild cucumber (PI 183967)cpecpiB463
Cp4.1LG01g24320Lsi08G007210Bottle gourd (USVL1VR-Ls)cpelsiB382
Cp4.1LG01g24320MELO3C019800.2Melon (DHL92) v3.6.1cpemedB461
Cp4.1LG01g24320CsaV3_6G036470Cucumber (Chinese Long) v3cpecucB0571
Cp4.1LG01g24320Bhi04G001098Wax gourdcpewgoB0537
Cp4.1LG01g24320CsGy6G020660Cucumber (Gy14) v2cgybcpeB800
Cp4.1LG01g24320Carg04559Silver-seed gourdcarcpeB0965
Cp4.1LG01g24320Carg02407Silver-seed gourdcarcpeB0374
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g24320Cp4.1LG13g09870Cucurbita pepo (Zucchini)cpecpeB199
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g24320Cucumber (Gy14) v2cgybcpeB635
Cp4.1LG01g24320Melon (DHL92) v3.6.1cpemedB446
Cp4.1LG01g24320Silver-seed gourdcarcpeB0679
Cp4.1LG01g24320Silver-seed gourdcarcpeB1176
Cp4.1LG01g24320Cucumber (Chinese Long) v3cpecucB0527
Cp4.1LG01g24320Wax gourdcpewgoB0527
Cp4.1LG01g24320Wax gourdcpewgoB0560
Cp4.1LG01g24320Cucurbita pepo (Zucchini)cpecpeB038
Cp4.1LG01g24320Cucurbita pepo (Zucchini)cpecpeB075
Cp4.1LG01g24320Cucurbita pepo (Zucchini)cpecpeB379
Cp4.1LG01g24320Cucurbita pepo (Zucchini)cpecpeB384
Cp4.1LG01g24320Cucurbita pepo (Zucchini)cpecpeB407
Cp4.1LG01g24320Cucumber (Gy14) v1cgycpeB0316
Cp4.1LG01g24320Cucumber (Gy14) v1cgycpeB0807
Cp4.1LG01g24320Cucurbita maxima (Rimu)cmacpeB435
Cp4.1LG01g24320Cucurbita maxima (Rimu)cmacpeB663
Cp4.1LG01g24320Cucurbita maxima (Rimu)cmacpeB734
Cp4.1LG01g24320Cucurbita maxima (Rimu)cmacpeB877
Cp4.1LG01g24320Cucurbita moschata (Rifu)cmocpeB401
Cp4.1LG01g24320Cucurbita moschata (Rifu)cmocpeB615
Cp4.1LG01g24320Cucurbita moschata (Rifu)cmocpeB687
Cp4.1LG01g24320Cucurbita moschata (Rifu)cmocpeB814
Cp4.1LG01g24320Wild cucumber (PI 183967)cpecpiB425
Cp4.1LG01g24320Cucumber (Chinese Long) v2cpecuB427
Cp4.1LG01g24320Bottle gourd (USVL1VR-Ls)cpelsiB324
Cp4.1LG01g24320Bottle gourd (USVL1VR-Ls)cpelsiB365
Cp4.1LG01g24320Watermelon (Charleston Gray)cpewcgB386
Cp4.1LG01g24320Watermelon (Charleston Gray)cpewcgB398
Cp4.1LG01g24320Watermelon (97103) v1cpewmB438
Cp4.1LG01g24320Watermelon (97103) v1cpewmB450
Cp4.1LG01g24320Melon (DHL92) v3.5.1cpemeB385