CmoCh15G004700 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G004700
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ubiquitin family protein
Location	Cmo_Chr15 : 2125273 .. 2127514 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCTCCATTAGGTATTTTGGTCTGTTGAACTCTGAGACGACCTAGGGTTTTGCTTTCTTGGGAGAAAGAAGAAGAAGATGATCGAGGTGGTGCTGAATGATCGGTTGGGGAAGAAGGTGAGAGTGAAGTGCAACGAAGACGACACCATCGGTGACTTGAAGAAGCTCGTGGCGGCCCAGACTGGGACTCGAGCTGAGAAGATTCGGATTCAGAAATGGTACAATATCTACAAGGATCATATTACTCTGAAGGATTACGAAATCCATGACGGCATGGGCCTCGAACTCTACTACAATTAGGTCATTTTCTCATCGCCCTTGGATCTTTTGTTTATTTTTCGCATGGGATGAAATTTTGAGGAAATATATTATCGCTGATCAATCTGATAAAGCAAGAAATACTTTTCAAATATATATATACTATTAGCTCGTTCACCAAGGGAACTGTTGCTAAATGTTAGTTGCAATACGTCTAATCTTATCCTACTAGTTATTCCTTGACGATCTCTGGTCTTTTAGAGATGAAGATTATGGATCGACCCTTGCGTCTCATATAACCATGTTGGATCCAATATATGATTCATTTATCTGCTCTGATCAATTAGTCTAACGGATTTTGGGGAACTGATTTTTACCTGATAAAAACTATAATCTTGTTTCTTGCCAGTGAAATTCATTTACCTTCTCACCGTATGGTGTAGCTATTAGTAAGTTTACTTCTTATCAACAACTTTGTAATTTCTCTAAACATCCACCGGCCAGGTCAATCAGAAGTGTTATAATGAAGCATCCTTTCCTTTTCCTCTCGAGGTTTTACACTCTACCACGAGGTCTGCCATTTAAGAACATTGATGAATACAGTTTATTATCCAATTATGCCATCTTCGCCTAAAGCCATGTTTCTGTGTAAACACATCAAGGAAATGCCAGAAAGTAGGAAGAATTTTCTGTCATATGAACCAAATGACAATCATCTGTGAGCCACAAGTGCGTGGGGGTAGTTCTTCCAAAGGCCTCAAAACACTTATTTATCGTTAGTATTTGCTATTTGTTACTTTCCCCCTCTCTCTGAATTGAGGTTAACCCCACCTTTTAAATGGCTAAACTGGGAGGTGCCGGGTTTGCAACAAACATAGGAATCTGTTAAAATATCATAGGATTTTAGGAATATAGGAAAATGATTTAGGGATTTTAGGAATAAATTTAGGAAAATGATTTAGGTATTTTAGGAAAAATGTTGAGAAATTTTAGGAATAGATGGATTAAATCTAGTTTAAATACCCCTCCATCCTACTTAGTTCATCGTTACGGAGCAATACAAAGTAGTAGTTTCTATTTTGTAAATCTCTTCTCGATTGGTCTTAATAAAGTGTGGAGTGTTTCCCACGTAGAGTCGATTTGTCTTAATAAAGTGTGCGAGTGTTTCCCACATAGAGTTGTGTTCAAGAGAATCCTCGCCAAAATTTTGTTTTTAAATCTGTTTCAGAAAGAATCATAATACCCCAAATCAGTGAGACGCTAGGACTGGTCCTCTGCAACTACTCTACGTAGGAAAAAAAATTCCTTGAAGAGATGAAGAATTTATTTAGGACTTCTCGTTTAGATAGTCCTACTCGAAGTGGTCAGGCGTGTTTTCTTGTAGTTAAGAAGAGGCAAACAACAAATGTTCCTCAATCATCAATTTTTTACAAAGTTGCAGTCGACGAATGCATTAAATTCCTTATACTAGCGTTATAGTGATACTTTATCATATGTATCTTGTCTTAATATACTAAGCATGGTTGCTTTTCATTTCGAAAAAGTTTGCTTTTCCATGTTGTCCATGAATAGGAATGAGCTGATGTAGTCTGTTTTTATTCAGTTAATGCAGGCATGGAAAGCCATACTGCTGGCTTTGCTACCGCTACCTCGGTAGCTCAATGTTGTCGTATGGCGCTGCCTGTGTAATTTGTAACATAAGAAGCATACATTGAAGACTGTTTCGGAATAAAACTCTGTTTGGGACCTCATGTAATACACAATCAAACTGCCTATTCGGTGATATTATATGTGGTAACTTCAATTAACTTTATGCTCGAAGGCATCATTTAGTTTTCTGTTCTCATTGATTTTGAAATTATTTCTTATAGCAAATTTAAGAGGTTGTTTGTAACCATTCAAGCCCAAGCTCATTACTAACAGATATTGTCATCTTTGGGCTTTCCCTCAATGTTTTAAAACGCCTCTACTAGGAGAGGTTTTTAC

mRNA sequence

CCTCCATTAGGTATTTTGGTCTGTTGAACTCTGAGACGACCTAGGGTTTTGCTTTCTTGGGAGAAAGAAGAAGAAGATGATCGAGGTGGTGCTGAATGATCGGTTGGGGAAGAAGGTGAGAGTGAAGTGCAACGAAGACGACACCATCGGTGACTTGAAGAAGCTCGTGGCGGCCCAGACTGGGACTCGAGCTGAGAAGATTCGGATTCAGAAATGGTACAATATCTACAAGGATCATATTACTCTGAAGGATTACGAAATCCATGACGGCATGGGCCTCGAACTCTACTACAATTAGTTAATGCAGGCATGGAAAGCCATACTGCTGGCTTTGCTACCGCTACCTCGGTAGCTCAATGTTGTCGTATGGCGCTGCCTGTGTAATTTGTAACATAAGAAGCATACATTGAAGACTGTTTCGGAATAAAACTCTGTTTGGGACCTCATGTAATACACAATCAAACTGCCTATTCGGTGATATTATATGTGGTAACTTCAATTAACTTTATGCTCGAAGGCATCATTTAGTTTTCTGTTCTCATTGATTTTGAAATTATTTCTTATAGCAAATTTAAGAGGTTGTTTGTAACCATTCAAGCCCAAGCTCATTACTAACAGATATTGTCATCTTTGGGCTTTCCCTCAATGTTTTAAAACGCCTCTACTAGGAGAGGTTTTTAC

Coding sequence (CDS)

ATGATCGAGGTGGTGCTGAATGATCGGTTGGGGAAGAAGGTGAGAGTGAAGTGCAACGAAGACGACACCATCGGTGACTTGAAGAAGCTCGTGGCGGCCCAGACTGGGACTCGAGCTGAGAAGATTCGGATTCAGAAATGGTACAATATCTACAAGGATCATATTACTCTGAAGGATTACGAAATCCATGACGGCATGGGCCTCGAACTCTACTACAATTAG

Homology

[Close]

BLAST of CmoCh15G004700 vs. Swiss-Prot
Match: UBL5_ARATH (Ubiquitin-like protein 5 OS=Arabidopsis thaliana GN=UBL5 PE=3 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 3.9e-36
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 1


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]

BLAST of CmoCh15G004700 vs. Swiss-Prot
Match: UBL5_PSAOB (Ubiquitin-like protein 5 OS=Psammomys obesus GN=UBL5 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.9e-28
Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 1


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DY
Sbjct: 1  MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 61 EIHDGMGLELYY 73
          EIHDGM LELYY
Sbjct: 61 EIHDGMNLELYY 72

[Close]

BLAST of CmoCh15G004700 vs. Swiss-Prot
Match: UBL5_MOUSE (Ubiquitin-like protein 5 OS=Mus musculus GN=Ubl5 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.9e-28
Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 1


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DY
Sbjct: 1  MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 61 EIHDGMGLELYY 73
          EIHDGM LELYY
Sbjct: 61 EIHDGMNLELYY 72

[Close]

BLAST of CmoCh15G004700 vs. Swiss-Prot
Match: UBL5_MESAU (Ubiquitin-like protein 5 OS=Mesocricetus auratus GN=UBL5 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.9e-28
Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 1


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DY
Sbjct: 1  MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 61 EIHDGMGLELYY 73
          EIHDGM LELYY
Sbjct: 61 EIHDGMNLELYY 72

[Close]

BLAST of CmoCh15G004700 vs. Swiss-Prot
Match: UBL5_BOVIN (Ubiquitin-like protein 5 OS=Bos taurus GN=UBL5 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 3.9e-28
Identity = 58/72 (80.56%), Postives = 64/72 (88.89%), Query Frame = 1


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVV NDRLGKKVRVKCN DDTIGDLKKL+AAQTGTR  KI ++KWY I+KDH++L DY
Sbjct: 1  MIEVVCNDRLGKKVRVKCNTDDTIGDLKKLIAAQTGTRWNKIVLKKWYTIFKDHVSLGDY 60

Query: 61 EIHDGMGLELYY 73
          EIHDGM LELYY
Sbjct: 61 EIHDGMNLELYY 72

[Close]

BLAST of CmoCh15G004700 vs. TrEMBL
Match: R0GPM9_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10027479mg PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.0e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]

BLAST of CmoCh15G004700 vs. TrEMBL
Match: A0A078H902_BRANA (BnaA01g24730D protein OS=Brassica napus GN=BnaA01g24730D PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.0e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]

BLAST of CmoCh15G004700 vs. TrEMBL
Match: A0A0D3ABK7_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea GN=UBL5 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.0e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]

BLAST of CmoCh15G004700 vs. TrEMBL
Match: M4E4Y0_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.0e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]

BLAST of CmoCh15G004700 vs. TrEMBL
Match: D7MTG3_ARALL (Ubiquitin family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_917558 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.0e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]

BLAST of CmoCh15G004700 vs. TAIR10
Match: AT5G42300.1 (AT5G42300.1 ubiquitin-like protein 5)

HSP 1 Score: 151.4 bits (381), Expect = 2.2e-37
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 1


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]

BLAST of CmoCh15G004700 vs. TAIR10
Match: AT3G45180.1 (AT3G45180.1 Ubiquitin-like superfamily protein)

HSP 1 Score: 146.7 bits (369), Expect = 5.4e-36
Identity = 70/73 (95.89%), Postives = 71/73 (97.26%), Query Frame = 1


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNE+DTIGDLKKLVAAQTGTR EKIRIQKWYNIYKDHI LKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEEDTIGDLKKLVAAQTGTRPEKIRIQKWYNIYKDHIPLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]

BLAST of CmoCh15G004700 vs. NCBI nr
Match: gi|297791835|ref|XP_002863802.1| (ubiquitin family protein [Arabidopsis lyrata subsp. lyrata])

HSP 1 Score: 152.5 bits (384), Expect = 2.8e-34
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]

BLAST of CmoCh15G004700 vs. NCBI nr
Match: gi|629085023|gb|KCW51380.1| (hypothetical protein EUGRSUZ_J00924, partial [Eucalyptus grandis])

HSP 1 Score: 151.4 bits (381), Expect = 6.2e-34
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 1


Query: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
           MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRA+KIRIQKWYNIYKDHITLKDY
Sbjct: 61  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDY 120

Query: 61  EIHDGMGLELYYN 74
           EIHDGMGLELYYN
Sbjct: 121 EIHDGMGLELYYN 133

[Close]

BLAST of CmoCh15G004700 vs. NCBI nr
Match: gi|595839341|ref|XP_007207822.1| (hypothetical protein PRUPE_ppa023849mg [Prunus persica])

HSP 1 Score: 151.4 bits (381), Expect = 6.2e-34
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 1


Query: 1   MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
           MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRA+KIRIQKWYNIYKDHITLKDY
Sbjct: 36  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDY 95

Query: 61  EIHDGMGLELYYN 74
           EIHDGMGLELYYN
Sbjct: 96  EIHDGMGLELYYN 108

[Close]

BLAST of CmoCh15G004700 vs. NCBI nr
Match: gi|15238924|ref|NP_199045.1| (ubiquitin-like protein 5 [Arabidopsis thaliana])

HSP 1 Score: 151.4 bits (381), Expect = 6.2e-34
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 1


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCN+DDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNDDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

[Close]

BLAST of CmoCh15G004700 vs. NCBI nr
Match: gi|586677035|ref|XP_006838813.1| (PREDICTED: ubiquitin-like protein 5 [Amborella trichopoda])

HSP 1 Score: 151.4 bits (381), Expect = 6.2e-34
Identity = 72/73 (98.63%), Postives = 73/73 (100.00%), Query Frame = 1


Query: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRAEKIRIQKWYNIYKDHITLKDY 60
          MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRA+KIRIQKWYNIYKDHITLKDY
Sbjct: 1  MIEVVLNDRLGKKVRVKCNEDDTIGDLKKLVAAQTGTRADKIRIQKWYNIYKDHITLKDY 60

Query: 61 EIHDGMGLELYYN 74
          EIHDGMGLELYYN
Sbjct: 61 EIHDGMGLELYYN 73

The following BLAST results are available for this feature:

BLAST of CmoCh15G004700 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UBL5_ARATH	3.9e-36	98.63	Ubiquitin-like protein 5 OS=Arabidopsis thaliana GN=UBL5 PE=3 SV=1	[more]
UBL5_PSAOB	3.9e-28	80.56	Ubiquitin-like protein 5 OS=Psammomys obesus GN=UBL5 PE=3 SV=1	[more]
UBL5_MOUSE	3.9e-28	80.56	Ubiquitin-like protein 5 OS=Mus musculus GN=Ubl5 PE=1 SV=1	[more]
UBL5_MESAU	3.9e-28	80.56	Ubiquitin-like protein 5 OS=Mesocricetus auratus GN=UBL5 PE=3 SV=1	[more]
UBL5_BOVIN	3.9e-28	80.56	Ubiquitin-like protein 5 OS=Bos taurus GN=UBL5 PE=3 SV=1	[more]

BLAST of CmoCh15G004700 vs. TrEMBL


Match Name	E-value	Identity	Description
R0GPM9_9BRAS	2.0e-34	100.00	Uncharacterized protein OS=Capsella rubella GN=CARUB_v10027479mg PE=4 SV=1	[more]
A0A078H902_BRANA	2.0e-34	100.00	BnaA01g24730D protein OS=Brassica napus GN=BnaA01g24730D PE=4 SV=1	[more]
A0A0D3ABK7_BRAOL	2.0e-34	100.00	Uncharacterized protein OS=Brassica oleracea var. oleracea GN=UBL5 PE=4 SV=1	[more]
M4E4Y0_BRARP	2.0e-34	100.00	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]
D7MTG3_ARALL	2.0e-34	100.00	Ubiquitin family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_91755...	[more]

BLAST of CmoCh15G004700 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G42300.1	2.2e-37	98.63	ubiquitin-like protein 5	[more]
AT3G45180.1	5.4e-36	95.89	Ubiquitin-like superfamily protein	[more]

BLAST of CmoCh15G004700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|297791835\|ref\|XP_002863802.1\|	2.8e-34	100.00	ubiquitin family protein [Arabidopsis lyrata subsp. lyrata]	[more]
gi\|629085023\|gb\|KCW51380.1\|	6.2e-34	98.63	hypothetical protein EUGRSUZ_J00924, partial [Eucalyptus grandis]	[more]
gi\|595839341\|ref\|XP_007207822.1\|	6.2e-34	98.63	hypothetical protein PRUPE_ppa023849mg [Prunus persica]	[more]
gi\|15238924\|ref\|NP_199045.1\|	6.2e-34	98.63	ubiquitin-like protein 5 [Arabidopsis thaliana]	[more]
gi\|586677035\|ref\|XP_006838813.1\|	6.2e-34	98.63	PREDICTED: ubiquitin-like protein 5 [Amborella trichopoda]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000626	Ubiquitin_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0031386	protein tag

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G004700.1	CmoCh15G004700.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000626	Ubiquitin domain	PFAM	PF00240	ubiquitin	coord: 11..70 score: 1.
IPR000626	Ubiquitin domain	PROFILE	PS50053	UBIQUITIN_2	coord: 2..73 score: 10
None	No IPR available	GENE3D	G3DSA:3.10.20.90		coord: 1..73 score: 1.8
None	No IPR available	PANTHER	PTHR13042	FAMILY NOT NAMED	coord: 1..73 score: 8.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G004700	Cucsa.137660	Cucumber (Gy14) v1	cgycmoB0379
CmoCh15G004700	CmaCh15G004600	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G004700	CmaCh04G025720	Cucurbita maxima (Rimu)	cmacmoB692
CmoCh15G004700	Cla013767	Watermelon (97103) v1	cmowmB248
CmoCh15G004700	Csa6G405880	Cucumber (Chinese Long) v2	cmocuB300
CmoCh15G004700	MELO3C019800	Melon (DHL92) v3.5.1	cmomeB264
CmoCh15G004700	ClCG08G007540	Watermelon (Charleston Gray)	cmowcgB263
CmoCh15G004700	CSPI06G21400	Wild cucumber (PI 183967)	cmocpiB309
CmoCh15G004700	Lsi08G007210	Bottle gourd (USVL1VR-Ls)	cmolsiB283
CmoCh15G004700	Cp4.1LG13g09870	Cucurbita pepo (Zucchini)	cmocpeB268
CmoCh15G004700	Cp4.1LG01g24320	Cucurbita pepo (Zucchini)	cmocpeB279
CmoCh15G004700	MELO3C019800.2	Melon (DHL92) v3.6.1	cmomedB299
CmoCh15G004700	CsaV3_6G036470	Cucumber (Chinese Long) v3	cmocucB0362
CmoCh15G004700	Cla97C08G150260	Watermelon (97103) v2	cmowmbB300
CmoCh15G004700	Bhi04G001098	Wax gourd	cmowgoB0389
CmoCh15G004700	CsGy6G020660	Cucumber (Gy14) v2	cgybcmoB725
CmoCh15G004700	Carg04559	Silver-seed gourd	carcmoB0936
CmoCh15G004700	Carg02407	Silver-seed gourd	carcmoB0362

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh15G004700	CmoCh04G026940	Cucurbita moschata (Rifu)	cmocmoB261

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G004700	Silver-seed gourd	carcmoB1131
CmoCh15G004700	Cucumber (Chinese Long) v3	cmocucB0356
CmoCh15G004700	Wax gourd	cmowgoB0394
CmoCh15G004700	Wax gourd	cmowgoB0402
CmoCh15G004700	Cucurbita moschata (Rifu)	cmocmoB257
CmoCh15G004700	Cucumber (Gy14) v1	cgycmoB0846
CmoCh15G004700	Cucurbita maxima (Rimu)	cmacmoB691
CmoCh15G004700	Wild cucumber (PI 183967)	cmocpiB302
CmoCh15G004700	Cucumber (Chinese Long) v2	cmocuB294
CmoCh15G004700	Melon (DHL92) v3.5.1	cmomeB252
CmoCh15G004700	Watermelon (Charleston Gray)	cmowcgB253
CmoCh15G004700	Watermelon (97103) v1	cmowmB258
CmoCh15G004700	Cucurbita pepo (Zucchini)	cmocpeB288
CmoCh15G004700	Cucurbita pepo (Zucchini)	cmocpeB275
CmoCh15G004700	Bottle gourd (USVL1VR-Ls)	cmolsiB260
CmoCh15G004700	Bottle gourd (USVL1VR-Ls)	cmolsiB268
CmoCh15G004700	Cucumber (Gy14) v2	cgybcmoB590
CmoCh15G004700	Melon (DHL92) v3.6.1	cmomedB286