Cp4.1LG01g23700 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g23700
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Pectate lyase
Location	Cp4.1LG01 : 19493905 .. 19497538 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAACCCACCACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTAACCTTTTTCTTTGATTTGTTCTCCAATGGCGGCTTCCTTTTTCTTTTTGCTTCTTTTACCACTCTCTTTCTTCTTCACTGATTCCTCCTTGGCTGAAGTTCAAGATCCTCATCTTGTCGTTCAAGAAGTTCAAAGGTATACATGTTTTTGTTTTTCATTTGTTGTTTGTGGTTCAGTTTTGAGGAAGATTTCGACCCTTTTAACAAAATGTGGTTTCTTCTAACATGTTTTTAGTGTTTCAAATACAAAAGTTGTTTATATGTGAATCTTCATTTCTTACTCTTACTCGTTATTCACTCATTTAAACATTACAATCACCAAACTCCACAATAGTATGATACTATTCACTTTAAACATTTTAATAGTTTTACTTTTGATTTTTTCAAAAGCTCTCCAATCTTTATTTATAAACCTATGATCCTCTATTTATAAACCTATGATCCTCTGTAAGAACCCAAACCCATTGTTAGTAGATATGATCCGTTTTGACCCGTCACGTGTTGTCGTCAGACTCACGATTTTAAAACATGTTTGTTAGGAAGAGATTTCCACACCTTTATAAGAAATGTTTCGTTCCCCCTTTTTAACCAATGTGAAATCAGAGCTAAACACCGAGCGCTGTGCCAGCGAACACATCCTTATAAGAAATGTTTCGTTCTCCTTTCTAACCAATGTGGGATCAGAGCTAAACACTAAGCGGTGTGCCAGCCAGCACATCCTTATAAGAAATGTTTCGTTCCCCTTTCTAACCAATGTGGGATCAAAGCTAAACATCGAGCGGTGTGCCAGCGAGCAAATCCTTATAAGAAATGTTTCGTTTCCCTGTCTAACCAATGTGGGATCAGAGCTAAACACCGAGCGGTGTGCCAGCGAGGACGCTGGCTCCCCGAGGGGGTGAATTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAACATTTCTATAAGGGTAGGGAGACTCCCTAACAAACGTTTTAAAATTATAAGACTGACGGCGATACATATGCTAACAGTGAATGATAAGTATATTTCATACCTACAGCTTTAAGATATTGTCGTTTTTGGGTTTTCCCTTGGACTTTCCCAAGACTTTAATACCTGTGAAAGGTTTCCACACCCTTGCCGGTGTTTGTTCTCCTCTCCAACTAACGTGGGACACACAAGCACACTCATAAGGTTCTCATTAATAATGTGTCTTATTTATAAATGGACAGGAGCATCAATGAATCAAGAACAAGAAGAAACTTGGGATATTTGTCATGTAGAACAGGAAACCCAATAGACGACTGCTGGAGATGCGACCCCAATTGGGAAACCAACCGAAAGCGCTTAGCCGACTGCGCCATTGGGTTCGGCAAAAACGCCATCGGCGGCAGAAACGGCCGCTTCTACGTCGTCACAGACGCCGGCGACGACGACCCTCTCAACCCCAGACCAGGAACCCTCCGCCACGCCGTCATCCAAAACGAGCCCTTATGGATCATCTTCAAGCGTGACATGGTAATCCAACTCAGACAAGAACTGGTGATGAACTCGTTCAAGACCATCGACGGGCGTGGGGCCAGCGTGCATGTGGCAGGTGGGCCATGCATCACCATCCACTACGCCACAAACATCATAATCCACGGCATCCACATACATGACTGTAAGAGAGGGGGGAATGGTAACATACGGGACTCCCCACAGCACTCCGGGTGGTGGACTATATCGGACGGTGATGGAGTGTCGATCTTTGGTGGGAAGCATATTTGGGTTGACCATTGTTCCTTGTCTAATTGTAACGATGGGTTGATCGACGCGATTCATGGTTCGACGGCGATCACGATTTCGAATAATTACATGACTCATCATGATAAAGTGATGCTGTTGGGACATAGTGACTCTTACACTCAAGACAAGAATATGCAAGTTACTATTGCCTTCAACCATTTTGGTGAGGGCCTTGTTCAACGAATGCCGAGGTAAATCAAATTAATTTGCATTCTATTTGAGCTTTTCACACCCTTTTTAAAGAATGCTTCGTTCGTTTCCTCTCCAACCATAGTATCTTACAATCCACTCTCTTAGAGTCTCCTCACATACCATCCAGTGGCCGGCTTTGATACCATTCGTAACAGTCCAAACTCACTGTTAGAAGACATTGTCTTAAGCTATAAGCTTGAACGGCCACAAATGGTATCAGAGCTAGACACCGAGTCGTGTGAACGCTGGATCCCGAAGAGGGTTCACTGTTAGAAGACATTGTCCTAAGCTATAAGCTTGAACGGCCACAAATGGTATCAGAGCCAGACACCGAGTCGTGTGAACGCTGGATCCCGAAGAGGGTGAATGATTGGATCTCACATTTATTGTCCTCTTTGGGCTTTTCCTTTCAGGCTCCCCTCAAAGCTTTAAAACGGCCTGTTAGAGGTAGTTTGAAGGGTGGTTTGTTCTCCTCCCCCAACCAATGTGGGACATCACAATCTACCCCCTTCGGGGCCCAGCGTCCTCGCGGGCACTCTTTCCTTCCTATAATCGATGTGGGACCGCCCCCAAATCCACCCCCTTTGGGGCCAACGTCTTCACTGGCACACCGTCTCATGTCTACTCCTTTGGGGAAGAGCGAGAAGGTTGACACATCGTCTAGTGTCTGGCTCTGATACCATTTGTAACGACACAGGCCACAGCTAGCAAAATATTATCCTCTTTGGGCTTTCCCTTTCGGACTCCCCTTAATGCTTTAAAAGGCTCTGTTAGAGTAAGGTTTCTACATTCTTATAAATGTGGGACAACACAAAACCTCCTTCAGAGCCATAATTTTGCTAGGGCAAGGTTCCACATATAAGGTTCCACGTGTAAGGTTGCATAATTCAATTCAACTTTAAAAGCATCAAAATTTTGATGTGGGTATTTTTGTTTCCATCTAAAAATGGTGTCTTTGAATTGTGGGAATGATTTTGCAGATGCAGGCATGGGTATTTCCATGTGGTGAACAACGATTACACCCACTGGGAAATGTACGCAATTGGAGGGAGTGCTTCACCGACAATATACAGTCAAGGCAACAGATTTTTGGCGCCGGACGTCCGATACCGAAAGGAGGTGACAAAGCACGAGGACGCACCGGAGAGTGAGTGGCGTCACTGGAACTGGCGGTCAGAGGGCGACATGATGTTGAACGGCGCCTATTTTCGCCAGTCCGGCGCCGGCGCTGCGTCCAGCTACGCAAGAGCTTACAGTCTGAGCGCTAGACCCTCCTCCCTCGTTGGTTCTATCACGGTCACAGCCGGCGCCCTCAACTGCCGCAGAGGCTCCCGTTGCTAGTTAGTATTAACAGGAAAGGTCATATAACTGCAAGTACCGAAAATGAAGGAAGAAAGGGCCTTTGTTTATGAAGAGCAGTTGAATTATTATTAGTTTATGAAGATCTGAATTTTTGTGTTGGTTTAATTTCCATCCAACTTTTTGGTTTGCCAAAGCAGAGTATTTGGTTAAACTCGGATGTTTGTGATTGTGAAAGGTAATGGGAAAAGTATGAGGAATTATGTTTTTGAGTCACCAATCACGCTCACAAAAACGGAATGAGTACTATATATTTTACCCGTC

mRNA sequence

TAAACCCACCACTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTAACCTTTTTCTTTGATTTGTTCTCCAATGGCGGCTTCCTTTTTCTTTTTGCTTCTTTTACCACTCTCTTTCTTCTTCACTGATTCCTCCTTGGCTGAAGTTCAAGATCCTCATCTTGTCGTTCAAGAAGTTCAAAGAACAGGAAACCCAATAGACGACTGCTGGAGATGCGACCCCAATTGGGAAACCAACCGAAAGCGCTTAGCCGACTGCGCCATTGGGTTCGGCAAAAACGCCATCGGCGGCAGAAACGGCCGCTTCTACGTCGTCACAGACGCCGGCGACGACGACCCTCTCAACCCCAGACCAGGAACCCTCCGCCACGCCGTCATCCAAAACGAGCCCTTATGGATCATCTTCAAGCGTGACATGGTAATCCAACTCAGACAAGAACTGGTGATGAACTCGTTCAAGACCATCGACGGGCGTGGGGCCAGCGTGCATGTGGCAGGTGGGCCATGCATCACCATCCACTACGCCACAAACATCATAATCCACGGCATCCACATACATGACTGTAAGAGAGGGGGGAATGGTAACATACGGGACTCCCCACAGCACTCCGGGTGGTGGACTATATCGGACGGTGATGGAGTGTCGATCTTTGGTGGGAAGCATATTTGGGTTGACCATTGTTCCTTGTCTAATTGTAACGATGGGTTGATCGACGCGATTCATGGTTCGACGGCGATCACGATTTCGAATAATTACATGACTCATCATGATAAAGTGATGCTATGCAGGCATGGGTATTTCCATGTGGTGAACAACGATTACACCCACTGGGAAATGTACGCAATTGGAGGGAGTGCTTCACCGACAATATACAGTCAAGGCAACAGATTTTTGGCGCCGGACGTCCGATACCGAAAGGAGGTGACAAAGCACGAGGACGCACCGGAGAGTGAGTGGCGTCACTGGAACTGGCGGTCAGAGGGCGACATGATGTTGAACGGCGCCTATTTTCGCCAGTCCGGCGCCGGCGCTGCGTCCAGCTACGCAAGAGCTTACAGTCTGAGCGCTAGACCCTCCTCCCTCGTTGGTTCTATCACGGTCACAGCCGGCGCCCTCAACTGCCGCAGAGGCTCCCGTTGCTAGTTAGTATTAACAGGAAAGGTCATATAACTGCAAGTACCGAAAATGAAGGAAGAAAGGGCCTTTGTTTATGAAGAGCAGTTGAATTATTATTAGTTTATGAAGATCTGAATTTTTGTGTTGGTTTAATTTCCATCCAACTTTTTGGTTTGCCAAAGCAGAGTATTTGGTTAAACTCGGATGTTTGTGATTGTGAAAGGTAATGGGAAAAGTATGAGGAATTATGTTTTTGAGTCACCAATCACGCTCACAAAAACGGAATGAGTACTATATATTTTACCCGTC

Coding sequence (CDS)

ATGGCGGCTTCCTTTTTCTTTTTGCTTCTTTTACCACTCTCTTTCTTCTTCACTGATTCCTCCTTGGCTGAAGTTCAAGATCCTCATCTTGTCGTTCAAGAAGTTCAAAGAACAGGAAACCCAATAGACGACTGCTGGAGATGCGACCCCAATTGGGAAACCAACCGAAAGCGCTTAGCCGACTGCGCCATTGGGTTCGGCAAAAACGCCATCGGCGGCAGAAACGGCCGCTTCTACGTCGTCACAGACGCCGGCGACGACGACCCTCTCAACCCCAGACCAGGAACCCTCCGCCACGCCGTCATCCAAAACGAGCCCTTATGGATCATCTTCAAGCGTGACATGGTAATCCAACTCAGACAAGAACTGGTGATGAACTCGTTCAAGACCATCGACGGGCGTGGGGCCAGCGTGCATGTGGCAGGTGGGCCATGCATCACCATCCACTACGCCACAAACATCATAATCCACGGCATCCACATACATGACTGTAAGAGAGGGGGGAATGGTAACATACGGGACTCCCCACAGCACTCCGGGTGGTGGACTATATCGGACGGTGATGGAGTGTCGATCTTTGGTGGGAAGCATATTTGGGTTGACCATTGTTCCTTGTCTAATTGTAACGATGGGTTGATCGACGCGATTCATGGTTCGACGGCGATCACGATTTCGAATAATTACATGACTCATCATGATAAAGTGATGCTATGCAGGCATGGGTATTTCCATGTGGTGAACAACGATTACACCCACTGGGAAATGTACGCAATTGGAGGGAGTGCTTCACCGACAATATACAGTCAAGGCAACAGATTTTTGGCGCCGGACGTCCGATACCGAAAGGAGGTGACAAAGCACGAGGACGCACCGGAGAGTGAGTGGCGTCACTGGAACTGGCGGTCAGAGGGCGACATGATGTTGAACGGCGCCTATTTTCGCCAGTCCGGCGCCGGCGCTGCGTCCAGCTACGCAAGAGCTTACAGTCTGAGCGCTAGACCCTCCTCCCTCGTTGGTTCTATCACGGTCACAGCCGGCGCCCTCAACTGCCGCAGAGGCTCCCGTTGCTAG

Protein sequence

MAASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQRTGNPIDDCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC

Homology

[Close]

BLAST of Cp4.1LG01g23700 vs. Swiss-Prot
Match: PLY11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=3 SV=2)

HSP 1 Score: 572.8 bits (1475), Expect = 2.6e-162
Identity = 277/403 (68.73%), Postives = 310/403 (76.92%), Query Frame = 1


Query: 2   AASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR----------------TGNPIDDC 61
           A +F  LL +  +  F+ S    VQDP+LVV +V R                TGNPIDDC
Sbjct: 10  AYAFLLLLTIGNTLAFSSSLPDHVQDPNLVVDDVNRSVFNASRRSLAYLSCRTGNPIDDC 69

Query: 62  WRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNE 121
           WRCDPNWETNR+RLADCAIGFGKNAIGGR GR YVVTD  +DDP+NPRPGTLR+AV Q E
Sbjct: 70  WRCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEE 129

Query: 122 PLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCK 181
           PLWIIFKRDMVI+L++EL++ SFKTIDGRG+SVH+  GPC+ IHYATNIIIHGI+IHDCK
Sbjct: 130 PLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCK 189

Query: 182 RGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITIS 241
            G  G I+D P H+GWW  SDGD V+IFGGKH+W+DHCSLSNC+DGLIDAIHGSTAITIS
Sbjct: 190 PGSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITIS 249

Query: 242 NNYMTHHDKV--------------------------------MLCRHGYFHVVNNDYTHW 301
           NN+MTHHDKV                                  CRHGYFHVVNNDYTHW
Sbjct: 250 NNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 309

Query: 302 EMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYF 357
           EMYAIGGSASPTIYSQGNRFLAP+ R+ KEVTKHEDAPES+WR WNWRSEGDM+LNGAYF
Sbjct: 310 EMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYF 369

[Close]

BLAST of Cp4.1LG01g23700 vs. Swiss-Prot
Match: PLY_ZINVI (Pectate lyase OS=Zinnia violacea PE=1 SV=1)

HSP 1 Score: 569.3 bits (1466), Expect = 2.9e-161
Identity = 276/397 (69.52%), Postives = 309/397 (77.83%), Query Frame = 1


Query: 10  LLPLSFFFTDSSLAEV---QDPHLVVQEVQR---------------TGNPIDDCWRCDPN 69
           +LPL  F +  ++A     + PH +V EV +               TGNPIDDCWRCDPN
Sbjct: 5   ILPLILFISSLAIASSSPSRTPHAIVNEVHKSINASRRNLGYLSCGTGNPIDDCWRCDPN 64

Query: 70  WETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLWIIF 129
           W  NR+RLADCAIGFGKNA+GGRNGR YVVTD G+DDP+NP PGTLR+AVIQ+EPLWIIF
Sbjct: 65  WANNRQRLADCAIGFGKNAMGGRNGRIYVVTDPGNDDPVNPVPGTLRYAVIQDEPLWIIF 124

Query: 130 KRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGGNGN 189
           KRDMVIQLRQELVMNS KTIDGRG +VH+  GPCITIHYA+NIIIHGIHIHDCK+ GNGN
Sbjct: 125 KRDMVIQLRQELVMNSHKTIDGRGVNVHIGNGPCITIHYASNIIIHGIHIHDCKQAGNGN 184

Query: 190 IRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTH 249
           IR+SP HSGWWT SDGDG+SIF  K IW+DH SLSNC+DGLIDAIHGSTAITISNNYMTH
Sbjct: 185 IRNSPHHSGWWTQSDGDGISIFASKDIWIDHNSLSNCHDGLIDAIHGSTAITISNNYMTH 244

Query: 250 HDKV--------------------------------MLCRHGYFHVVNNDYTHWEMYAIG 309
           HDKV                                  CRHGYFHVVNNDYTHWEMYAIG
Sbjct: 245 HDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIG 304

Query: 310 GSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQSGAG 357
           GSASPTIYSQGNRFLAP+ R+ KEVTKHE+APESEW++WNWRSEGD+MLNGAYFR+SG  
Sbjct: 305 GSASPTIYSQGNRFLAPNTRFDKEVTKHENAPESEWKNWNWRSEGDLMLNGAYFRESGGR 364

[Close]

BLAST of Cp4.1LG01g23700 vs. Swiss-Prot
Match: PLY18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2)

HSP 1 Score: 557.8 bits (1436), Expect = 8.8e-158
Identity = 269/400 (67.25%), Postives = 309/400 (77.25%), Query Frame = 1


Query: 7   FLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR------------------TGNPIDDCWRC 66
           FLL  PL   F  S    V DP  VV+EV +                  TGNPIDDCWRC
Sbjct: 15  FLLYAPL---FLSSP---VPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCWRC 74

Query: 67  DPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLW 126
           DP+WE +R+RLADCAIGFGKNAIGGR+GR YVVTD+G+D+P++P+PGTLRHAV+Q+EPLW
Sbjct: 75  DPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLW 134

Query: 127 IIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGG 186
           IIF+RDM IQL++EL+MNSFKTIDGRGASVH++GGPCITI Y TNIIIHGIHIHDCK+GG
Sbjct: 135 IIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGG 194

Query: 187 NGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITISNNY 246
           N  +R SP+H GW TISDGDGVSIFGG H+WVDHCS SNC DGLIDAI GSTAIT+SNN+
Sbjct: 195 NAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNH 254

Query: 247 MTHHDKVML--------------------------------CRHGYFHVVNNDYTHWEMY 306
           MTHHDKVML                                CRHGYFHVVNNDYTHWEMY
Sbjct: 255 MTHHDKVMLLGHSDTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 314

Query: 307 AIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQS 357
           AIGGSA+PTI SQGNRFLAP++R+ KEVTKHEDAPESEW+ WNWRS GD++LNGA+F  S
Sbjct: 315 AIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPS 374

[Close]

BLAST of Cp4.1LG01g23700 vs. Swiss-Prot
Match: PLY22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1)

HSP 1 Score: 552.0 bits (1421), Expect = 4.8e-156
Identity = 269/402 (66.92%), Postives = 306/402 (76.12%), Query Frame = 1


Query: 6   FFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR-----------------TGNPIDDCWRC 65
           F L+      F   +S   V DP LVV+EV R                 +GNPIDDCWRC
Sbjct: 31  FALIFFCCILFSALASSLPVSDPELVVEEVHRKINESISRRKLGFFSCGSGNPIDDCWRC 90

Query: 66  DPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLW 125
           D +WE NRKRLADC IGFGKNAIGGR+G  YVVTD G+DDP+NPRPGTLR+AVIQ+EPLW
Sbjct: 91  DKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQDEPLW 150

Query: 126 IIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGG 185
           IIFKRDM IQL++EL+MNSFKT+DGRGASVH++GGPCITI Y TNIIIHG+HIHDCK+GG
Sbjct: 151 IIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDCKQGG 210

Query: 186 NGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITISNNY 245
           N  +RDSP+H G+ T+SDGDGVSIFGG H+WVDHCSLSNCNDGLIDAI GSTAITISNNY
Sbjct: 211 NTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITISNNY 270

Query: 246 MTHHDKVML--------------------------------CRHGYFHVVNNDYTHWEMY 305
           +THH+KVML                                CRHGYFHVVNNDYTHWEMY
Sbjct: 271 LTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 330

Query: 306 AIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQS 357
           AIGGSA+PTI SQGNRFLAPD    KEVTKHEDAPE EWR+WNWRSEGD++LNGA+F  S
Sbjct: 331 AIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEGDLLLNGAFFTYS 390

[Close]

BLAST of Cp4.1LG01g23700 vs. Swiss-Prot
Match: PLY18_SOLLC (Probable pectate lyase P18 OS=Solanum lycopersicum GN=9612 PE=2 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 1.2e-149
Identity = 267/404 (66.09%), Postives = 305/404 (75.50%), Query Frame = 1


Query: 4   SFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQRT-----------------GNPIDDCW 63
           +F  LLL PL        ++ +QDP LVVQ+V R+                 GNPID   
Sbjct: 7   TFSLLLLAPLLV------ISSIQDPELVVQDVHRSINASLTRRNLGYLSCGSGNPIDRLL 66

Query: 64  RCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEP 123
              P         + CAIGFGKNAIGG+NGR YVVTD+G+DDP+NP+PGTLRHAVIQ+EP
Sbjct: 67  AMQPQLGKKSPAFSYCAIGFGKNAIGGKNGRIYVVTDSGNDDPVNPKPGTLRHAVIQDEP 126

Query: 124 LWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKR 183
           LWIIFKRDMVIQL+QELVMNS+KTIDGRGASVH++GGPCITIH+ +NIIIHGI+IHDCK+
Sbjct: 127 LWIIFKRDMVIQLKQELVMNSYKTIDGRGASVHISGGPCITIHHTSNIIIHGINIHDCKQ 186

Query: 184 GGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITISN 243
            GNGNIRDSP HSGWW +SDGDG+SIFGGK+IWVDHCSLSNC+DGLIDAIHGSTAITISN
Sbjct: 187 SGNGNIRDSPNHSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITISN 246

Query: 244 ---------NYMTHHD-----------------------KVMLCRHGYFHVVNNDYTHWE 303
                      + H D                       ++  CRHGYFHVVNNDYTHWE
Sbjct: 247 NYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 306

Query: 304 MYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFR 357
           MYAIGGSA+PTI SQGNRFLAP+ +YRKEVTKHEDAPES+WR WNWRSEGD+MLNGAYFR
Sbjct: 307 MYAIGGSAAPTINSQGNRFLAPNEKYRKEVTKHEDAPESQWRSWNWRSEGDLMLNGAYFR 366

[Close]

BLAST of Cp4.1LG01g23700 vs. TrEMBL
Match: A0A0A0KNX3_CUCSA (Pectate lyase OS=Cucumis sativus GN=Csa_5G517820 PE=3 SV=1)

HSP 1 Score: 640.2 bits (1650), Expect = 1.5e-180
Identity = 317/407 (77.89%), Postives = 334/407 (82.06%), Query Frame = 1


Query: 5   FFFLLLLPLSFFFT-------DSSLAEV-QDPHLVVQEVQR---------------TGNP 64
           +F LLLL LSFF +       +SSL  V Q PHLVV+EVQR               TGNP
Sbjct: 12  YFLLLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGSRRNLGYLSCGTGNP 71

Query: 65  IDDCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAV 124
           IDDCWRCD NWETNRKRLADCAIGFGKNAIGG+NGRFYVVTD+G+DDPLNPRPGTLRHAV
Sbjct: 72  IDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRPGTLRHAV 131

Query: 125 IQNEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHI 184
           IQNEPLWIIFKRDMVI+L QELVMNSFKTIDGRGASVH+AGGPCI IHYATNIIIHGIHI
Sbjct: 132 IQNEPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYATNIIIHGIHI 191

Query: 185 HDCKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTA 244
           HDCKRGGN NIRDSPQH+GWWT SDGDGVSI GGK IW+DHCSLSNCNDGLIDAIHGSTA
Sbjct: 192 HDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHGSTA 251

Query: 245 ITISNNYMTHHDKV--------------------------------MLCRHGYFHVVNND 304
           ITISNNYMTHHDKV                                  CRHGYFHVVNND
Sbjct: 252 ITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 311

Query: 305 YTHWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLN 357
           YTHWEMYAIGGSASPTIYSQGNRF+AP  R+RKEVTKHEDAPESEWRHWNWRSEGD++LN
Sbjct: 312 YTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDLLLN 371

[Close]

BLAST of Cp4.1LG01g23700 vs. TrEMBL
Match: B9GIX5_POPTR (Pectate lyase OS=Populus trichocarpa GN=POPTR_0001s35960g PE=3 SV=1)

HSP 1 Score: 618.2 bits (1593), Expect = 6.1e-174
Identity = 302/403 (74.94%), Postives = 325/403 (80.65%), Query Frame = 1


Query: 1   MAASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR---------------TGNPIDDC 60
           +A    F    P   F   SS   +QDP LVVQEV R               TGNPIDDC
Sbjct: 4   LAILLIFFFSAPAPHFVFSSS---IQDPELVVQEVHRSINASRRNLGYLSCGTGNPIDDC 63

Query: 61  WRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNE 120
           WRCDPNWE NR+RLADCAIGFGKNAIGGRNGR YVVTD+G+DD +NP+PGTLRHAVIQ+E
Sbjct: 64  WRCDPNWERNRQRLADCAIGFGKNAIGGRNGRIYVVTDSGNDDAVNPKPGTLRHAVIQDE 123

Query: 121 PLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCK 180
           PLWIIFKRDMVIQLRQELVMNS+KTIDGRGASVH+AGGPCITIHYATNIIIHGIHIHDCK
Sbjct: 124 PLWIIFKRDMVIQLRQELVMNSYKTIDGRGASVHIAGGPCITIHYATNIIIHGIHIHDCK 183

Query: 181 RGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITIS 240
           +GGNG+IRDSP+HSGWWT SDGDGVSIF  KHIWVDHCSLSNC+DGLIDAIHGSTAITIS
Sbjct: 184 QGGNGDIRDSPRHSGWWTPSDGDGVSIFASKHIWVDHCSLSNCHDGLIDAIHGSTAITIS 243

Query: 241 NNYMTHHDKV--------------------------------MLCRHGYFHVVNNDYTHW 300
           NN+MTHHDKV                                  CRHGYFHVVNNDYTHW
Sbjct: 244 NNFMTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 303

Query: 301 EMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYF 357
           EMYAIGGSASPTI SQGNRFLAP+ R+ KEVTKHEDAPESEWRHWNWRSEGD+MLNGAYF
Sbjct: 304 EMYAIGGSASPTINSQGNRFLAPNRRFNKEVTKHEDAPESEWRHWNWRSEGDLMLNGAYF 363

[Close]

BLAST of Cp4.1LG01g23700 vs. TrEMBL
Match: Q9M505_VITVI (Pectate lyase OS=Vitis vinifera GN=Pel PE=2 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 2.9e-168
Identity = 292/403 (72.46%), Postives = 323/403 (80.15%), Query Frame = 1


Query: 1   MAASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR---------------TGNPIDDC 60
           M+  F F LL P+       S A VQDP +VVQEV R               TGNPIDDC
Sbjct: 1   MSLLFLFSLLPPIL-----GSPAPVQDPEVVVQEVHRSINASRRNLGYFSCGTGNPIDDC 60

Query: 61  WRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNE 120
           WRCD NW+ NR+RLADCAIGFGK+A+GG+NGR YVVTD+ DDDP+NPRPGTLRHAVIQ+E
Sbjct: 61  WRCDANWDKNRQRLADCAIGFGKDAMGGKNGRIYVVTDSEDDDPVNPRPGTLRHAVIQDE 120

Query: 121 PLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCK 180
           PLWIIFKRDMVI+L+QELVMNSFKTIDGRGASVH+AGGPCITIHYA+NIIIHG+HIHDCK
Sbjct: 121 PLWIIFKRDMVIKLKQELVMNSFKTIDGRGASVHIAGGPCITIHYASNIIIHGLHIHDCK 180

Query: 181 RGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITIS 240
           +GGN NIR+SP HSGWWT+SDGDGVSIFGG+HIWVDHCSLSNC+DGLIDAIHGSTAITIS
Sbjct: 181 QGGNANIRNSPHHSGWWTVSDGDGVSIFGGRHIWVDHCSLSNCHDGLIDAIHGSTAITIS 240

Query: 241 NNYMTHHDKV--------------------------------MLCRHGYFHVVNNDYTHW 300
           NN+MTHHDKV                                  CRHGYFHVVNNDYTHW
Sbjct: 241 NNFMTHHDKVMLLGHSDSYTEDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 300

Query: 301 EMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYF 357
           EMYAIGGSA PTI SQGNRFLAP+ R++K VTKHEDAPESEWRHWNWRSEGD+MLNGA+F
Sbjct: 301 EMYAIGGSADPTINSQGNRFLAPNDRFKKAVTKHEDAPESEWRHWNWRSEGDLMLNGAFF 360

[Close]

BLAST of Cp4.1LG01g23700 vs. TrEMBL
Match: F6GX67_VITVI (Pectate lyase OS=Vitis vinifera GN=VIT_14s0219g00230 PE=3 SV=1)

HSP 1 Score: 599.4 bits (1544), Expect = 2.9e-168
Identity = 292/403 (72.46%), Postives = 323/403 (80.15%), Query Frame = 1


Query: 1   MAASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR---------------TGNPIDDC 60
           M+  F F LL P+       S A VQDP +VVQEV R               TGNPIDDC
Sbjct: 6   MSLLFLFSLLPPIL-----GSSAPVQDPEVVVQEVHRSINASRRNLGYFSCGTGNPIDDC 65

Query: 61  WRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNE 120
           WRCD NW+ NR+RLADCAIGFGK+A+GG+NGR YVVTD+ DDDP+NPRPGTLRHAVIQ+E
Sbjct: 66  WRCDANWDKNRQRLADCAIGFGKDAMGGKNGRIYVVTDSEDDDPVNPRPGTLRHAVIQDE 125

Query: 121 PLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCK 180
           PLWIIFKRDMVI+L+QELVMNSFKTIDGRGASVH+AGGPCITIHYA+NIIIHG+HIHDCK
Sbjct: 126 PLWIIFKRDMVIKLKQELVMNSFKTIDGRGASVHIAGGPCITIHYASNIIIHGLHIHDCK 185

Query: 181 RGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITIS 240
           +GGN NIR+SP HSGWWT+SDGDGVSIFGG+HIWVDHCSLSNC+DGLIDAIHGSTAITIS
Sbjct: 186 QGGNANIRNSPHHSGWWTVSDGDGVSIFGGRHIWVDHCSLSNCHDGLIDAIHGSTAITIS 245

Query: 241 NNYMTHHDKV--------------------------------MLCRHGYFHVVNNDYTHW 300
           NN+MTHHDKV                                  CRHGYFHVVNNDYTHW
Sbjct: 246 NNFMTHHDKVMLLGHSDSYTEDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 305

Query: 301 EMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYF 357
           EMYAIGGSA PTI SQGNRFLAP+ R++K VTKHEDAPESEWRHWNWRSEGD+MLNGA+F
Sbjct: 306 EMYAIGGSADPTINSQGNRFLAPNDRFKKAVTKHEDAPESEWRHWNWRSEGDLMLNGAFF 365

[Close]

BLAST of Cp4.1LG01g23700 vs. TrEMBL
Match: A0A068V7I1_COFCA (Pectate lyase OS=Coffea canephora GN=GSCOC_T00019083001 PE=3 SV=1)

HSP 1 Score: 599.0 bits (1543), Expect = 3.8e-168
Identity = 294/402 (73.13%), Postives = 325/402 (80.85%), Query Frame = 1


Query: 5   FFFLLLLPLSFFFTD-SSLAEVQDPHLVVQEVQR---------------TGNPIDDCWRC 64
           F  L+L P+    +  SS A V+DP LVVQ+VQR               TGNPIDDCWRC
Sbjct: 12  FITLVLTPVLVISSSASSAASVKDPDLVVQDVQRSMNASRRNLGYLSCGTGNPIDDCWRC 71

Query: 65  DPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLW 124
           DP+WE NR+RLADC IGFGK+A+GGRNGR YVVTDAGDDD +NP+PGTLRHAVIQ+EPLW
Sbjct: 72  DPDWENNRQRLADCGIGFGKDAMGGRNGRIYVVTDAGDDDAVNPKPGTLRHAVIQDEPLW 131

Query: 125 IIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGG 184
           IIFKRDMVIQLRQELVMNS KTIDGRGASVH++ GPCITIHYATNIIIHGIHIHDCK+GG
Sbjct: 132 IIFKRDMVIQLRQELVMNSHKTIDGRGASVHISDGPCITIHYATNIIIHGIHIHDCKQGG 191

Query: 185 NGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITISNNY 244
           NGNIR+SP+HSG+WT+SDGDG+SIFGG+H+WVDHCSLSNC+DGLIDAIHGSTAITISNNY
Sbjct: 192 NGNIRNSPEHSGYWTVSDGDGISIFGGQHVWVDHCSLSNCHDGLIDAIHGSTAITISNNY 251

Query: 245 MTHHDKVML--------------------------------CRHGYFHVVNNDYTHWEMY 304
            T+HDKVML                                CRHGYFHVVNNDYTHWEMY
Sbjct: 252 FTNHDKVMLLGHSDYYTQDKNMQATIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 311

Query: 305 AIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQS 357
           AIGGSA+PTI SQGNRFLAP+  +RKEVTKHEDAPESEW+HWNWRSEGD+MLNGAYFR+S
Sbjct: 312 AIGGSAAPTINSQGNRFLAPNENFRKEVTKHEDAPESEWQHWNWRSEGDLMLNGAYFRES 371

[Close]

BLAST of Cp4.1LG01g23700 vs. TAIR10
Match: AT3G27400.1 (AT3G27400.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 572.8 bits (1475), Expect = 1.5e-163
Identity = 277/403 (68.73%), Postives = 310/403 (76.92%), Query Frame = 1


Query: 2   AASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR----------------TGNPIDDC 61
           A +F  LL +  +  F+ S    VQDP+LVV +V R                TGNPIDDC
Sbjct: 10  AYAFLLLLTIGNTLAFSSSLPDHVQDPNLVVDDVNRSVFNASRRSLAYLSCRTGNPIDDC 69

Query: 62  WRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNE 121
           WRCDPNWETNR+RLADCAIGFGKNAIGGR GR YVVTD  +DDP+NPRPGTLR+AV Q E
Sbjct: 70  WRCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQEE 129

Query: 122 PLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCK 181
           PLWIIFKRDMVI+L++EL++ SFKTIDGRG+SVH+  GPC+ IHYATNIIIHGI+IHDCK
Sbjct: 130 PLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDCK 189

Query: 182 RGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITIS 241
            G  G I+D P H+GWW  SDGD V+IFGGKH+W+DHCSLSNC+DGLIDAIHGSTAITIS
Sbjct: 190 PGSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITIS 249

Query: 242 NNYMTHHDKV--------------------------------MLCRHGYFHVVNNDYTHW 301
           NN+MTHHDKV                                  CRHGYFHVVNNDYTHW
Sbjct: 250 NNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 309

Query: 302 EMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYF 357
           EMYAIGGSASPTIYSQGNRFLAP+ R+ KEVTKHEDAPES+WR WNWRSEGDM+LNGAYF
Sbjct: 310 EMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAYF 369

[Close]

BLAST of Cp4.1LG01g23700 vs. TAIR10
Match: AT4G24780.1 (AT4G24780.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 557.8 bits (1436), Expect = 5.0e-159
Identity = 269/400 (67.25%), Postives = 309/400 (77.25%), Query Frame = 1


Query: 7   FLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR------------------TGNPIDDCWRC 66
           FLL  PL   F  S    V DP  VV+EV +                  TGNPIDDCWRC
Sbjct: 15  FLLYAPL---FLSSP---VPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCWRC 74

Query: 67  DPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLW 126
           DP+WE +R+RLADCAIGFGKNAIGGR+GR YVVTD+G+D+P++P+PGTLRHAV+Q+EPLW
Sbjct: 75  DPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLW 134

Query: 127 IIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGG 186
           IIF+RDM IQL++EL+MNSFKTIDGRGASVH++GGPCITI Y TNIIIHGIHIHDCK+GG
Sbjct: 135 IIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGG 194

Query: 187 NGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITISNNY 246
           N  +R SP+H GW TISDGDGVSIFGG H+WVDHCS SNC DGLIDAI GSTAIT+SNN+
Sbjct: 195 NAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNH 254

Query: 247 MTHHDKVML--------------------------------CRHGYFHVVNNDYTHWEMY 306
           MTHHDKVML                                CRHGYFHVVNNDYTHWEMY
Sbjct: 255 MTHHDKVMLLGHSDTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 314

Query: 307 AIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQS 357
           AIGGSA+PTI SQGNRFLAP++R+ KEVTKHEDAPESEW+ WNWRS GD++LNGA+F  S
Sbjct: 315 AIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPS 374

[Close]

BLAST of Cp4.1LG01g23700 vs. TAIR10
Match: AT5G63180.1 (AT5G63180.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 552.0 bits (1421), Expect = 2.7e-157
Identity = 269/402 (66.92%), Postives = 306/402 (76.12%), Query Frame = 1


Query: 6   FFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR-----------------TGNPIDDCWRC 65
           F L+      F   +S   V DP LVV+EV R                 +GNPIDDCWRC
Sbjct: 31  FALIFFCCILFSALASSLPVSDPELVVEEVHRKINESISRRKLGFFSCGSGNPIDDCWRC 90

Query: 66  DPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLW 125
           D +WE NRKRLADC IGFGKNAIGGR+G  YVVTD G+DDP+NPRPGTLR+AVIQ+EPLW
Sbjct: 91  DKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQDEPLW 150

Query: 126 IIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGG 185
           IIFKRDM IQL++EL+MNSFKT+DGRGASVH++GGPCITI Y TNIIIHG+HIHDCK+GG
Sbjct: 151 IIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDCKQGG 210

Query: 186 NGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITISNNY 245
           N  +RDSP+H G+ T+SDGDGVSIFGG H+WVDHCSLSNCNDGLIDAI GSTAITISNNY
Sbjct: 211 NTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITISNNY 270

Query: 246 MTHHDKVML--------------------------------CRHGYFHVVNNDYTHWEMY 305
           +THH+KVML                                CRHGYFHVVNNDYTHWEMY
Sbjct: 271 LTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 330

Query: 306 AIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQS 357
           AIGGSA+PTI SQGNRFLAPD    KEVTKHEDAPE EWR+WNWRSEGD++LNGA+F  S
Sbjct: 331 AIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEGDLLLNGAFFTYS 390

[Close]

BLAST of Cp4.1LG01g23700 vs. TAIR10
Match: AT1G67750.1 (AT1G67750.1 Pectate lyase family protein)

HSP 1 Score: 517.7 bits (1332), Expect = 5.7e-147
Identity = 262/403 (65.01%), Postives = 298/403 (73.95%), Query Frame = 1


Query: 1   MAASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR---------------TGNPIDDC 60
           ++ S F  LLL LS  F  S+   V +P LVVQEV                 TGNPIDDC
Sbjct: 8   LSLSLFSCLLLVLSPTFIAST--PVSEPELVVQEVNEKINASRRNLGVLSCGTGNPIDDC 67

Query: 61  WRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNE 120
           WRCDP WE NR+RLADCAIGFGK+AIGGR+G+ YVVTD+ D D +NP+PGTLRHAVIQ+E
Sbjct: 68  WRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQDE 127

Query: 121 PLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCK 180
           PLWIIF RDMVI+L++EL+MNSFKTIDGRGASVH+AGG CIT+ Y TNIIIHG++IHDCK
Sbjct: 128 PLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHDCK 187

Query: 181 RGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITIS 240
           R GN  +RDSP H GW T SDGD VSIFGG H+WVDHCSLSNC DGLIDAIHGSTAITIS
Sbjct: 188 RKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAITIS 247

Query: 241 -------NNYMT--HHD-----------------------KVMLCRHGYFHVVNNDYTHW 300
                  N  M   H D                       ++  CRHGYFHVVNNDYTHW
Sbjct: 248 NNYLSHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 307

Query: 301 EMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYF 357
           +MYAIGGSA+PTI SQGNRFLAP+    KEVTK+EDAP S+W+ WNWRSEGD+ LNGA+F
Sbjct: 308 QMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLFLNGAFF 367

[Close]

BLAST of Cp4.1LG01g23700 vs. TAIR10
Match: AT1G04680.1 (AT1G04680.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 499.2 bits (1284), Expect = 2.1e-141
Identity = 233/351 (66.38%), Postives = 270/351 (76.92%), Query Frame = 1


Query: 38  TGNPIDDCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTL 97
           TGNPIDDCWRCDPNW  NRKRLADC IGFG+NAIGGR+GRFYVVTD  DD+P+NPRPGTL
Sbjct: 79  TGNPIDDCWRCDPNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDNPVNPRPGTL 138

Query: 98  RHAVIQNEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIH 157
           RHAVIQ+ PLWI+FKRDMVIQL+QEL++NSFKTIDGRGA+VH+A G CITI + TN+I+H
Sbjct: 139 RHAVIQDRPLWIVFKRDMVIQLKQELIVNSFKTIDGRGANVHIANGGCITIQFVTNVIVH 198

Query: 158 GIHIHDCKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIH 217
           G+HIHDCK  GN  +R S  H GW T++DGD +SIFG  H+W+DH SLS+C DGL+DA+ 
Sbjct: 199 GLHIHDCKPTGNAMVRSSETHFGWRTMADGDAISIFGSSHVWIDHNSLSHCADGLVDAVM 258

Query: 218 GSTAITISNNYMTHHDKVML--------------------------------CRHGYFHV 277
           GSTAITISNN++THH++VML                                CRHGYFHV
Sbjct: 259 GSTAITISNNHLTHHNEVMLLGHSDSYMRDKAMQVTIAYNHFGVGLIQRMPRCRHGYFHV 318

Query: 278 VNNDYTHWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGD 337
           VNNDYTHWEMYAIGGSA+PTI SQGNR+ AP   + KEVTK  D P S W+ WNWRSEGD
Sbjct: 319 VNNDYTHWEMYAIGGSANPTINSQGNRYAAPKNPFAKEVTKRVDTPASHWKGWNWRSEGD 378

Query: 338 MMLNGAYFRQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 357
           ++ NGAYF  SGA A+ SYARA SLSA+ SSLVG IT  AGAL CRRG +C
Sbjct: 379 LLQNGAYFTSSGAAASGSYARASSLSAKSSSLVGHITSDAGALPCRRGRQC 429

[Close]

BLAST of Cp4.1LG01g23700 vs. NCBI nr
Match: gi|449450042|ref|XP_004142773.1| (PREDICTED: pectate lyase-like [Cucumis sativus])

HSP 1 Score: 640.2 bits (1650), Expect = 2.2e-180
Identity = 317/407 (77.89%), Postives = 334/407 (82.06%), Query Frame = 1


Query: 5   FFFLLLLPLSFFFT-------DSSLAEV-QDPHLVVQEVQR---------------TGNP 64
           +F LLLL LSFF +       +SSL  V Q PHLVV+EVQR               TGNP
Sbjct: 12  YFLLLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGSRRNLGYLSCGTGNP 71

Query: 65  IDDCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAV 124
           IDDCWRCD NWETNRKRLADCAIGFGKNAIGG+NGRFYVVTD+G+DDPLNPRPGTLRHAV
Sbjct: 72  IDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRPGTLRHAV 131

Query: 125 IQNEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHI 184
           IQNEPLWIIFKRDMVI+L QELVMNSFKTIDGRGASVH+AGGPCI IHYATNIIIHGIHI
Sbjct: 132 IQNEPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYATNIIIHGIHI 191

Query: 185 HDCKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTA 244
           HDCKRGGN NIRDSPQH+GWWT SDGDGVSI GGK IW+DHCSLSNCNDGLIDAIHGSTA
Sbjct: 192 HDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHGSTA 251

Query: 245 ITISNNYMTHHDKV--------------------------------MLCRHGYFHVVNND 304
           ITISNNYMTHHDKV                                  CRHGYFHVVNND
Sbjct: 252 ITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 311

Query: 305 YTHWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLN 357
           YTHWEMYAIGGSASPTIYSQGNRF+AP  R+RKEVTKHEDAPESEWRHWNWRSEGD++LN
Sbjct: 312 YTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDLLLN 371

[Close]

BLAST of Cp4.1LG01g23700 vs. NCBI nr
Match: gi|659117905|ref|XP_008458848.1| (PREDICTED: pectate lyase-like [Cucumis melo])

HSP 1 Score: 635.6 bits (1638), Expect = 5.3e-179
Identity = 321/417 (76.98%), Postives = 333/417 (79.86%), Query Frame = 1


Query: 1   MAAS-----FFFLLLLPLSFFFT--------DSSLAEV-QDPHLVVQEVQR--------- 60
           MAAS     +F  LLL L FF +        +SSL  V Q PHL V+EVQR         
Sbjct: 1   MAASSSSSLYFLFLLLSLCFFLSMSTAPIPSNSSLPFVHQHPHLAVEEVQRSINGSRRNL 60

Query: 61  ------TGNPIDDCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLN 120
                 TGNPIDDCWRCD NWETNRKRLADCAIGFGKNAIGG+NGRFYVVTDA DDDPLN
Sbjct: 61  GYLSCGTGNPIDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDARDDDPLN 120

Query: 121 PRPGTLRHAVIQNEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYA 180
           PRPGTLRHAVIQNEPLWIIFKRDMVIQL QELVMNSFKTIDGRGASVHVAGGPCI IHYA
Sbjct: 121 PRPGTLRHAVIQNEPLWIIFKRDMVIQLEQELVMNSFKTIDGRGASVHVAGGPCIKIHYA 180

Query: 181 TNIIIHGIHIHDCKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDG 240
           TNIIIHGIHIHDCKRGGN NIRDSPQH+GWWT SDGDGVSI GGK IW+DHCSLSNCNDG
Sbjct: 181 TNIIIHGIHIHDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDG 240

Query: 241 LIDAIHGSTAITISNNYMTHHDKV--------------------------------MLCR 300
           LIDAIHGSTAITISNNYMTHHDKV                                  CR
Sbjct: 241 LIDAIHGSTAITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCR 300

Query: 301 HGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWN 357
           HGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRF+AP  R+RKEVTKHEDAPESEWR+WN
Sbjct: 301 HGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRYWN 360

[Close]

BLAST of Cp4.1LG01g23700 vs. NCBI nr
Match: gi|224060175|ref|XP_002300069.1| (pectate lyase family protein [Populus trichocarpa])

HSP 1 Score: 618.2 bits (1593), Expect = 8.8e-174
Identity = 302/403 (74.94%), Postives = 325/403 (80.65%), Query Frame = 1


Query: 1   MAASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR---------------TGNPIDDC 60
           +A    F    P   F   SS   +QDP LVVQEV R               TGNPIDDC
Sbjct: 4   LAILLIFFFSAPAPHFVFSSS---IQDPELVVQEVHRSINASRRNLGYLSCGTGNPIDDC 63

Query: 61  WRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNE 120
           WRCDPNWE NR+RLADCAIGFGKNAIGGRNGR YVVTD+G+DD +NP+PGTLRHAVIQ+E
Sbjct: 64  WRCDPNWERNRQRLADCAIGFGKNAIGGRNGRIYVVTDSGNDDAVNPKPGTLRHAVIQDE 123

Query: 121 PLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCK 180
           PLWIIFKRDMVIQLRQELVMNS+KTIDGRGASVH+AGGPCITIHYATNIIIHGIHIHDCK
Sbjct: 124 PLWIIFKRDMVIQLRQELVMNSYKTIDGRGASVHIAGGPCITIHYATNIIIHGIHIHDCK 183

Query: 181 RGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITIS 240
           +GGNG+IRDSP+HSGWWT SDGDGVSIF  KHIWVDHCSLSNC+DGLIDAIHGSTAITIS
Sbjct: 184 QGGNGDIRDSPRHSGWWTPSDGDGVSIFASKHIWVDHCSLSNCHDGLIDAIHGSTAITIS 243

Query: 241 NNYMTHHDKV--------------------------------MLCRHGYFHVVNNDYTHW 300
           NN+MTHHDKV                                  CRHGYFHVVNNDYTHW
Sbjct: 244 NNFMTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 303

Query: 301 EMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYF 357
           EMYAIGGSASPTI SQGNRFLAP+ R+ KEVTKHEDAPESEWRHWNWRSEGD+MLNGAYF
Sbjct: 304 EMYAIGGSASPTINSQGNRFLAPNRRFNKEVTKHEDAPESEWRHWNWRSEGDLMLNGAYF 363

[Close]

BLAST of Cp4.1LG01g23700 vs. NCBI nr
Match: gi|694426320|ref|XP_009340844.1| (PREDICTED: pectate lyase-like [Pyrus x bretschneideri])

HSP 1 Score: 617.1 bits (1590), Expect = 2.0e-173
Identity = 301/395 (76.20%), Postives = 322/395 (81.52%), Query Frame = 1


Query: 9   LLLPLSFFFTDSSLAEVQDPHLVVQEVQR---------------TGNPIDDCWRCDPNWE 68
           L+  LS  F  SS  +VQDP  VV+EV R               TGNPIDDCWRCDPNWE
Sbjct: 12  LITSLSATFVSSS--QVQDPERVVEEVHRSINASRRNLAYLSCGTGNPIDDCWRCDPNWE 71

Query: 69  TNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLWIIFKR 128
            NR+R ADCAIGFGK+AIGGRNGR YVVTD+GDDDP+NP+PGTLRHAVIQ+EPLWIIFKR
Sbjct: 72  RNRQRFADCAIGFGKDAIGGRNGRIYVVTDSGDDDPVNPKPGTLRHAVIQDEPLWIIFKR 131

Query: 129 DMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGGNGNIR 188
           DMV+QL+QELVMNSFKTIDGRGASVH+AGGPCITIHYATNIIIHGIHIHDCK  GNGNIR
Sbjct: 132 DMVVQLKQELVMNSFKTIDGRGASVHIAGGPCITIHYATNIIIHGIHIHDCKPAGNGNIR 191

Query: 189 DSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHD 248
           +SP+HSGWWT+SDGDGVSIF G+HIWVDHCSLSNC+DGLIDAIHGSTAITISNNYMTHHD
Sbjct: 192 NSPEHSGWWTVSDGDGVSIFNGQHIWVDHCSLSNCHDGLIDAIHGSTAITISNNYMTHHD 251

Query: 249 KV--------------------------------MLCRHGYFHVVNNDYTHWEMYAIGGS 308
           KV                                  CRHGYFHVVNNDYTHWEMYAIGGS
Sbjct: 252 KVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGS 311

Query: 309 ASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQSGAGAA 357
           ASPTI SQGNRFLAPD R+ KEVTKHEDAPESEWR WNWRSEGDM+LNGA+FRQSGAGA+
Sbjct: 312 ASPTILSQGNRFLAPDRRFDKEVTKHEDAPESEWRKWNWRSEGDMLLNGAFFRQSGAGAS 371

[Close]

BLAST of Cp4.1LG01g23700 vs. NCBI nr
Match: gi|743933273|ref|XP_011010949.1| (PREDICTED: pectate lyase-like [Populus euphratica])

HSP 1 Score: 616.7 bits (1589), Expect = 2.6e-173
Identity = 301/403 (74.69%), Postives = 326/403 (80.89%), Query Frame = 1


Query: 1   MAASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQR---------------TGNPIDDC 60
           +A    F L  P +     SS   +QDP LVVQEVQR               TGNPIDDC
Sbjct: 4   LAILLIFFLSAPATHLVFSSS---IQDPELVVQEVQRSINASRRNLGYLSCGTGNPIDDC 63

Query: 61  WRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNE 120
           WRCDPNWE NR+RLADCAIGFGKNAIGGRNGR YVVTD+G+DD +NP+PGTLRHAVIQ+E
Sbjct: 64  WRCDPNWERNRQRLADCAIGFGKNAIGGRNGRIYVVTDSGNDDAVNPKPGTLRHAVIQDE 123

Query: 121 PLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCK 180
           PLWIIFKRDMVIQLRQELVMNS+KTIDGRGASVH+AGGPCITIHYATNIIIHGIHIHDCK
Sbjct: 124 PLWIIFKRDMVIQLRQELVMNSYKTIDGRGASVHIAGGPCITIHYATNIIIHGIHIHDCK 183

Query: 181 RGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAITIS 240
           +GGNG+IRDSP+H GWWT SDGDGVSIF  KHIWVDHCSLSNC+DGLIDAIHGSTAITIS
Sbjct: 184 QGGNGDIRDSPRHFGWWTPSDGDGVSIFASKHIWVDHCSLSNCHDGLIDAIHGSTAITIS 243

Query: 241 NNYMTHHDKV--------------------------------MLCRHGYFHVVNNDYTHW 300
           NN+MTHHDKV                                  CRHGYFHVVNNDYTHW
Sbjct: 244 NNFMTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 303

Query: 301 EMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYF 357
           EMYAIGGSA+PTI SQGNRFLAP+ R+ KEVTKHEDAPESEWRHWNWRSEGD+MLNGAYF
Sbjct: 304 EMYAIGGSAAPTINSQGNRFLAPNRRFNKEVTKHEDAPESEWRHWNWRSEGDLMLNGAYF 363

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g23700 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PLY11_ARATH	2.6e-162	68.73	Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=3 SV=2	[more]
PLY_ZINVI	2.9e-161	69.52	Pectate lyase OS=Zinnia violacea PE=1 SV=1	[more]
PLY18_ARATH	8.8e-158	67.25	Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2	[more]
PLY22_ARATH	4.8e-156	66.92	Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1	[more]
PLY18_SOLLC	1.2e-149	66.09	Probable pectate lyase P18 OS=Solanum lycopersicum GN=9612 PE=2 SV=1	[more]

BLAST of Cp4.1LG01g23700 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNX3_CUCSA	1.5e-180	77.89	Pectate lyase OS=Cucumis sativus GN=Csa_5G517820 PE=3 SV=1	[more]
B9GIX5_POPTR	6.1e-174	74.94	Pectate lyase OS=Populus trichocarpa GN=POPTR_0001s35960g PE=3 SV=1	[more]
Q9M505_VITVI	2.9e-168	72.46	Pectate lyase OS=Vitis vinifera GN=Pel PE=2 SV=1	[more]
F6GX67_VITVI	2.9e-168	72.46	Pectate lyase OS=Vitis vinifera GN=VIT_14s0219g00230 PE=3 SV=1	[more]
A0A068V7I1_COFCA	3.8e-168	73.13	Pectate lyase OS=Coffea canephora GN=GSCOC_T00019083001 PE=3 SV=1	[more]

BLAST of Cp4.1LG01g23700 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G27400.1	1.5e-163	68.73	Pectin lyase-like superfamily protein	[more]
AT4G24780.1	5.0e-159	67.25	Pectin lyase-like superfamily protein	[more]
AT5G63180.1	2.7e-157	66.92	Pectin lyase-like superfamily protein	[more]
AT1G67750.1	5.7e-147	65.01	Pectate lyase family protein	[more]
AT1G04680.1	2.1e-141	66.38	Pectin lyase-like superfamily protein	[more]

BLAST of Cp4.1LG01g23700 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449450042\|ref\|XP_004142773.1\|	2.2e-180	77.89	PREDICTED: pectate lyase-like [Cucumis sativus]	[more]
gi\|659117905\|ref\|XP_008458848.1\|	5.3e-179	76.98	PREDICTED: pectate lyase-like [Cucumis melo]	[more]
gi\|224060175\|ref\|XP_002300069.1\|	8.8e-174	74.94	pectate lyase family protein [Populus trichocarpa]	[more]
gi\|694426320\|ref\|XP_009340844.1\|	2.0e-173	76.20	PREDICTED: pectate lyase-like [Pyrus x bretschneideri]	[more]
gi\|743933273\|ref\|XP_011010949.1\|	2.6e-173	74.69	PREDICTED: pectate lyase-like [Populus euphratica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR018082	AmbAllergen
IPR012334	Pectin_lyas_fold
IPR011050	Pectin_lyase_fold/virulence
IPR002022	Pec_lyase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045490	pectin catabolic process
biological_process	GO:0009624	response to nematode
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030570	pectate lyase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g23700.1	Cp4.1LG01g23700.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002022	Pectate lyase/Amb allergen	PFAM	PF00544	Pec_lyase_C	coord: 120..239 score: 1.
IPR002022	Pectate lyase/Amb allergen	SMART	SM00656	amb_all	coord: 114..279 score: 9.1
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 36..351 score: 1.5
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 40..238 score: 1.4E-79coord: 239..347 score: 3.6
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 186..207 score: 1.6E-40coord: 62..79 score: 1.6E-40coord: 122..138 score: 1.6E-40coord: 86..111 score: 1.6
None	No IPR available	PANTHER	PTHR31683	FAMILY NOT NAMED	coord: 1..356 score: 2.4E
None	No IPR available	PANTHER	PTHR31683:SF29	PECTATE LYASE 11-RELATED	coord: 1..356 score: 2.4E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g23700	Cucsa.011030	Cucumber (Gy14) v1	cgycpeB0522
Cp4.1LG01g23700	CmaCh04G026640	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g23700	CmoCh04G027910	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g23700	Cla004642	Watermelon (97103) v1	cpewmB381
Cp4.1LG01g23700	Csa5G517820	Cucumber (Chinese Long) v2	cpecuB417
Cp4.1LG01g23700	MELO3C021607	Melon (DHL92) v3.5.1	cpemeB358
Cp4.1LG01g23700	ClCG09G019510	Watermelon (Charleston Gray)	cpewcgB344
Cp4.1LG01g23700	CSPI05G17960	Wild cucumber (PI 183967)	cpecpiB416
Cp4.1LG01g23700	Lsi02G016140	Bottle gourd (USVL1VR-Ls)	cpelsiB336
Cp4.1LG01g23700	MELO3C021607.2	Melon (DHL92) v3.6.1	cpemedB418
Cp4.1LG01g23700	CsaV3_5G026870	Cucumber (Chinese Long) v3	cpecucB0519
Cp4.1LG01g23700	Bhi06G000499	Wax gourd	cpewgoB0502
Cp4.1LG01g23700	CsGy5G017640	Cucumber (Gy14) v2	cgybcpeB627
Cp4.1LG01g23700	Carg04480	Silver-seed gourd	carcpeB0965

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g23700	Cucurbita pepo (Zucchini)	cpecpeB199
Cp4.1LG01g23700	Cucurbita maxima (Rimu)	cmacpeB317
Cp4.1LG01g23700	Cucurbita moschata (Rifu)	cmocpeB279
Cp4.1LG01g23700	Silver-seed gourd	carcpeB0374