CSPI05G17960 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G17960
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Pectate lyase
Location	Chr5 : 19094179 .. 19096263 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCTTCTTCTTCTTCTTCTTCTTCCCTTTACTTTTTGTTGCTTCTTTTATCTCTTTCTTTCTTCTTGTCTATGACTGCTCCACTACCTTCCAATTCCTCCTTACCTTTTGTTCATCAACATCCTCATCTCGTCGTTGAAGAAGTTCAAAGGTATATATATACATTTTTGTTATGTACATTGGTTCTCATACATATTAAATATACTCTTGTTTTAGTTCTTGTACTTCTAAATCATTTAACTTTCGGTCATGCATGCATTTTTAAAAACAAATCTTTTATGTAACAAAGTTTTAGGGTTAAACTTGGCTCACTTGTGAAAATAAATTTATATGGGAAGAGCAGTTGTTATGATGAGTAAAATTTTAATTTGTGTTATTATTTTGTAGATCCAATTAAAATAAACCTTTTTTAAAAGAATAAAACATGACAAGTAGACACCTTAAAAGGTGGGAATGTAATGTGACAAAGGAACAAACATTGAAAGTTTACTATTTTAAAGAATGAGCACCTAGCTAACATAGAACCAAACCAAAACTGTATTCAAAATTTTGGGGAAAATGCTTCTTAGTGTATCTATGTTTTGATATACATTTGGTAATTGTATTAGTTATTATTTCTGGTTGTAAAATAAATTTGTGGTTACTGATGGCGGCACGCAGGAGCATAAATGGATCAAGAAGAAACTTGGGGTATTTATCATGTGGAACAGGAAACCCAATAGACGATTGTTGGAGATGCGATTCCAATTGGGAAACAAACCGTAAACGCTTAGCCGATTGCGCCATCGGCTTCGGCAAAAACGCAATCGGCGGCAAAAACGGCCGTTTCTACGTAGTCACTGACTCCGGGAACGACGACCCACTTAACCCCCGTCCGGGCACCCTCCGCCACGCCGTCATCCAAAACGAACCCTTATGGATCATCTTCAAGCGCGACATGGTAATCAAACTCGCCCAAGAGCTGGTCATGAACTCCTTCAAAACCATCGACGGACGTGGCGCCAGCGTCCACCTGGCAGGTGGCCCTTGTATTAAAATCCACTACGCGACGAATATAATCATCCACGGCATCCATATTCACGATTGCAAGAGAGGTGGGAATGCTAACATACGAGACTCCCCACAGCATGCTGGCTGGTGGACTGCATCTGACGGTGATGGTGTCTCCATTTTAGGTGGTAAACAAATCTGGATCGATCATTGCTCTTTGTCTAATTGTAATGATGGGTTGATTGACGCCATTCATGGATCAACGGCTATTACTATATCCAATAACTATATGACACATCATGATAAGGTTATGTTATTGGGACATAGTGATTCTTTCACCCAAGATAAAAACATGCAAGTTACTATTGCTTTTAACCATTTTGGTGAAGGACTTGTCCAACGAATGCCAAGGTAAATTTCATATTCCTTTTCATCATCTCTGCAATATTACTTTCATTCTCAATTAAAAACAGATTTAAACCTATATGCTATATGTGTAGATGTAGACATGGATATTTCCATGTAGTGAACAACGATTACACTCATTGGGAAATGTATGCCATCGGAGGGAGTGCTTCACCCACGATATACAGCCAAGGCAATAGATTCGTGGCGCCTTATAATCGGTTTCGAAAGGAGGTAACAAAGCACGAGGACGCACCCGAGAGCGAGTGGCGCCATTGGAACTGGCGTTCTGAGGGTGACTTGTTGTTGAATGGCGCCTATTTTCGCCAATCAGGCGCTGGTGCCTCCTCTAGCTATGCACGAGCTTATAGTCTCAGCGCTAGACCCTCATCTCTTGTTGGGGATATCACTATCACTGCAGGTGCTCTCAATTGCCGCAGGGGCTCTCGTTGCTAACTGATCTAGCGTGACTCTAGCTTAATAATTATTTAGTATATCCTTTATATTTTATATCAAGAAGGTAAAAATAGAATACATCTCAATATATATAATTAATTATATGAAGAAAGATGTGATGTTAAGTTTATTTTGGTTCCAACATTTTGAGTTTTTGCAAAGTGAAACGTAAGATTTTGGTTGAACTCGGGATGTTTGTGAATGTGAAAGCTAATGGCAGAAAGTGAGGA

mRNA sequence

ATGGCGGCTTCTTCTTCTTCTTCTTCTTCCCTTTACTTTTTGTTGCTTCTTTTATCTCTTTCTTTCTTCTTGTCTATGACTGCTCCACTACCTTCCAATTCCTCCTTACCTTTTGTTCATCAACATCCTCATCTCGTCGTTGAAGAAGTTCAAAGGAGCATAAATGGATCAAGAAGAAACTTGGGGTATTTATCATGTGGAACAGGAAACCCAATAGACGATTGTTGGAGATGCGATTCCAATTGGGAAACAAACCGTAAACGCTTAGCCGATTGCGCCATCGGCTTCGGCAAAAACGCAATCGGCGGCAAAAACGGCCGTTTCTACGTAGTCACTGACTCCGGGAACGACGACCCACTTAACCCCCGTCCGGGCACCCTCCGCCACGCCGTCATCCAAAACGAACCCTTATGGATCATCTTCAAGCGCGACATGGTAATCAAACTCGCCCAAGAGCTGGTCATGAACTCCTTCAAAACCATCGACGGACGTGGCGCCAGCGTCCACCTGGCAGGTGGCCCTTGTATTAAAATCCACTACGCGACGAATATAATCATCCACGGCATCCATATTCACGATTGCAAGAGAGGTGGGAATGCTAACATACGAGACTCCCCACAGCATGCTGGCTGGTGGACTGCATCTGACGGTGATGGTGTCTCCATTTTAGGTGGTAAACAAATCTGGATCGATCATTGCTCTTTGTCTAATTGTAATGATGGGTTGATTGACGCCATTCATGGATCAACGGCTATTACTATATCCAATAACTATATGACACATCATGATAAGGTTATGTTATTGGGACATAGTGATTCTTTCACCCAAGATAAAAACATGCAAGTTACTATTGCTTTTAACCATTTTGGTGAAGGACTTGTCCAACGAATGCCAAGATGTAGACATGGATATTTCCATGTAGTGAACAACGATTACACTCATTGGGAAATGTATGCCATCGGAGGGAGTGCTTCACCCACGATATACAGCCAAGGCAATAGATTCGTGGCGCCTTATAATCGGTTTCGAAAGGAGGTAACAAAGCACGAGGACGCACCCGAGAGCGAGTGGCGCCATTGGAACTGGCGTTCTGAGGGTGACTTGTTGTTGAATGGCGCCTATTTTCGCCAATCAGGCGCTGGTGCCTCCTCTAGCTATGCACGAGCTTATAGTCTCAGCGCTAGACCCTCATCTCTTGTTGGGGATATCACTATCACTGCAGGTGCTCTCAATTGCCGCAGGGGCTCTCGTTGCTAA

Coding sequence (CDS)

ATGGCGGCTTCTTCTTCTTCTTCTTCTTCCCTTTACTTTTTGTTGCTTCTTTTATCTCTTTCTTTCTTCTTGTCTATGACTGCTCCACTACCTTCCAATTCCTCCTTACCTTTTGTTCATCAACATCCTCATCTCGTCGTTGAAGAAGTTCAAAGGAGCATAAATGGATCAAGAAGAAACTTGGGGTATTTATCATGTGGAACAGGAAACCCAATAGACGATTGTTGGAGATGCGATTCCAATTGGGAAACAAACCGTAAACGCTTAGCCGATTGCGCCATCGGCTTCGGCAAAAACGCAATCGGCGGCAAAAACGGCCGTTTCTACGTAGTCACTGACTCCGGGAACGACGACCCACTTAACCCCCGTCCGGGCACCCTCCGCCACGCCGTCATCCAAAACGAACCCTTATGGATCATCTTCAAGCGCGACATGGTAATCAAACTCGCCCAAGAGCTGGTCATGAACTCCTTCAAAACCATCGACGGACGTGGCGCCAGCGTCCACCTGGCAGGTGGCCCTTGTATTAAAATCCACTACGCGACGAATATAATCATCCACGGCATCCATATTCACGATTGCAAGAGAGGTGGGAATGCTAACATACGAGACTCCCCACAGCATGCTGGCTGGTGGACTGCATCTGACGGTGATGGTGTCTCCATTTTAGGTGGTAAACAAATCTGGATCGATCATTGCTCTTTGTCTAATTGTAATGATGGGTTGATTGACGCCATTCATGGATCAACGGCTATTACTATATCCAATAACTATATGACACATCATGATAAGGTTATGTTATTGGGACATAGTGATTCTTTCACCCAAGATAAAAACATGCAAGTTACTATTGCTTTTAACCATTTTGGTGAAGGACTTGTCCAACGAATGCCAAGATGTAGACATGGATATTTCCATGTAGTGAACAACGATTACACTCATTGGGAAATGTATGCCATCGGAGGGAGTGCTTCACCCACGATATACAGCCAAGGCAATAGATTCGTGGCGCCTTATAATCGGTTTCGAAAGGAGGTAACAAAGCACGAGGACGCACCCGAGAGCGAGTGGCGCCATTGGAACTGGCGTTCTGAGGGTGACTTGTTGTTGAATGGCGCCTATTTTCGCCAATCAGGCGCTGGTGCCTCCTCTAGCTATGCACGAGCTTATAGTCTCAGCGCTAGACCCTCATCTCTTGTTGGGGATATCACTATCACTGCAGGTGCTCTCAATTGCCGCAGGGGCTCTCGTTGCTAA

Homology

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BLAST of CSPI05G17960 vs. Swiss-Prot
Match: PLY_ZINVI (Pectate lyase OS=Zinnia violacea PE=1 SV=1)

HSP 1 Score: 677.6 bits (1747), Expect = 9.0e-194
Identity = 317/402 (78.86%), Postives = 351/402 (87.31%), Query Frame = 1


Query: 17  LLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGSRRNLGYLSCGTGNPIDDCW 76
           +L L  F+S  A   S+ S     + PH +V EV +SIN SRRNLGYLSCGTGNPIDDCW
Sbjct: 5   ILPLILFISSLAIASSSPS-----RTPHAIVNEVHKSINASRRNLGYLSCGTGNPIDDCW 64

Query: 77  RCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRPGTLRHAVIQNEP 136
           RCD NW  NR+RLADCAIGFGKNA+GG+NGR YVVTD GNDDP+NP PGTLR+AVIQ+EP
Sbjct: 65  RCDPNWANNRQRLADCAIGFGKNAMGGRNGRIYVVTDPGNDDPVNPVPGTLRYAVIQDEP 124

Query: 137 LWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYATNIIIHGIHIHDCKR 196
           LWIIFKRDMVI+L QELVMNS KTIDGRG +VH+  GPCI IHYA+NIIIHGIHIHDCK+
Sbjct: 125 LWIIFKRDMVIQLRQELVMNSHKTIDGRGVNVHIGNGPCITIHYASNIIIHGIHIHDCKQ 184

Query: 197 GGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHGSTAITISN 256
            GN NIR+SP H+GWWT SDGDG+SI   K IWIDH SLSNC+DGLIDAIHGSTAITISN
Sbjct: 185 AGNGNIRNSPHHSGWWTQSDGDGISIFASKDIWIDHNSLSNCHDGLIDAIHGSTAITISN 244

Query: 257 NYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 316
           NYMTHHDKVMLLGHSDS+TQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
Sbjct: 245 NYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 304

Query: 317 MYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDLLLNGAYFR 376
           MYAIGGSASPTIYSQGNRF+AP  RF KEVTKHE+APESEW++WNWRSEGDL+LNGAYFR
Sbjct: 305 MYAIGGSASPTIYSQGNRFLAPNTRFDKEVTKHENAPESEWKNWNWRSEGDLMLNGAYFR 364

Query: 377 QSGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 419
           +SG  A+SS+ARA SLS RPS+LV  +T +AGAL CR+GSRC
Sbjct: 365 ESGGRAASSFARASSLSGRPSTLVASMTRSAGALVCRKGSRC 401

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BLAST of CSPI05G17960 vs. Swiss-Prot
Match: PLY11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=3 SV=2)

HSP 1 Score: 673.7 bits (1737), Expect = 1.3e-192
Identity = 319/416 (76.68%), Postives = 356/416 (85.58%), Query Frame = 1


Query: 4   SSSSSSSLYFLLLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSI-NGSRRNLG 63
           S S++   Y  LLLL++   L+ ++ LP +       Q P+LVV++V RS+ N SRR+L 
Sbjct: 3   SYSNNHFAYAFLLLLTIGNTLAFSSSLPDHV------QDPNLVVDDVNRSVFNASRRSLA 62

Query: 64  YLSCGTGNPIDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNP 123
           YLSC TGNPIDDCWRCD NWETNR+RLADCAIGFGKNAIGG+ GR YVVTD  NDDP+NP
Sbjct: 63  YLSCRTGNPIDDCWRCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNP 122

Query: 124 RPGTLRHAVIQNEPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYAT 183
           RPGTLR+AV Q EPLWIIFKRDMVI+L +EL++ SFKTIDGRG+SVH+  GPC+KIHYAT
Sbjct: 123 RPGTLRYAVTQEEPLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYAT 182

Query: 184 NIIIHGIHIHDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGL 243
           NIIIHGI+IHDCK G    I+D P H GWW  SDGD V+I GGK +WIDHCSLSNC+DGL
Sbjct: 183 NIIIHGINIHDCKPGSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGL 242

Query: 244 IDAIHGSTAITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRH 303
           IDAIHGSTAITISNN+MTHHDKVMLLGHSDS+TQDKNMQVTIAFNHFGEGLVQRMPRCRH
Sbjct: 243 IDAIHGSTAITISNNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRH 302

Query: 304 GYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNW 363
           GYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRF+AP  RF KEVTKHEDAPES+WR WNW
Sbjct: 303 GYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNW 362

Query: 364 RSEGDLLLNGAYFRQSGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 419
           RSEGD+LLNGAYFR+SGA A S+YARA SLSARPSSLVG IT TAG L+CRRG RC
Sbjct: 363 RSEGDMLLNGAYFRESGAEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 412

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BLAST of CSPI05G17960 vs. Swiss-Prot
Match: PLY18_SOLLC (Probable pectate lyase P18 OS=Solanum lycopersicum GN=9612 PE=2 SV=1)

HSP 1 Score: 652.1 bits (1681), Expect = 4.0e-186
Identity = 313/405 (77.28%), Postives = 346/405 (85.43%), Query Frame = 1


Query: 18  LSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGS--RRNLGYLSCGTGNPIDDC 77
           L  +F L + APL   SS+    Q P LVV++V RSIN S  RRNLGYLSCG+GNPID  
Sbjct: 4   LFFTFSLLLLAPLLVISSI----QDPELVVQDVHRSINASLTRRNLGYLSCGSGNPIDRL 63

Query: 78  WRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRPGTLRHAVIQNE 137
                         + CAIGFGKNAIGGKNGR YVVTDSGNDDP+NP+PGTLRHAVIQ+E
Sbjct: 64  LAMQPQLGKKSPAFSYCAIGFGKNAIGGKNGRIYVVTDSGNDDPVNPKPGTLRHAVIQDE 123

Query: 138 PLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYATNIIIHGIHIHDCK 197
           PLWIIFKRDMVI+L QELVMNS+KTIDGRGASVH++GGPCI IH+ +NIIIHGI+IHDCK
Sbjct: 124 PLWIIFKRDMVIQLKQELVMNSYKTIDGRGASVHISGGPCITIHHTSNIIIHGINIHDCK 183

Query: 198 RGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHGSTAITIS 257
           + GN NIRDSP H+GWW  SDGDG+SI GGK IW+DHCSLSNC+DGLIDAIHGSTAITIS
Sbjct: 184 QSGNGNIRDSPNHSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITIS 243

Query: 258 NNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 317
           NNY THHDKVMLLGHSDSFTQDK MQVT+AFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW
Sbjct: 244 NNYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 303

Query: 318 EMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDLLLNGAYF 377
           EMYAIGGSA+PTI SQGNRF+AP  ++RKEVTKHEDAPES+WR WNWRSEGDL+LNGAYF
Sbjct: 304 EMYAIGGSAAPTINSQGNRFLAPNEKYRKEVTKHEDAPESQWRSWNWRSEGDLMLNGAYF 363

Query: 378 RQSGAGASSS--YARAYSLSARPSSLVGDITITAGALNCRRGSRC 419
           RQ+GAGASSS  YARA SLSARPSSLVG IT  AG +NC++GSRC
Sbjct: 364 RQTGAGASSSSTYARASSLSARPSSLVGSITTNAGPVNCKKGSRC 404

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BLAST of CSPI05G17960 vs. Swiss-Prot
Match: PLY18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2)

HSP 1 Score: 651.7 bits (1680), Expect = 5.3e-186
Identity = 308/407 (75.68%), Postives = 350/407 (86.00%), Query Frame = 1


Query: 15  LLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGS---RRNLGYLSCGTGNP 74
           L +  +SF L   APL  +S +P     P  VVEEV +SIN S   RR LGYLSC TGNP
Sbjct: 8   LFITIVSFLLY--APLFLSSPVP----DPESVVEEVHKSINASVAGRRKLGYLSCTTGNP 67

Query: 75  IDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRPGTLRHAV 134
           IDDCWRCD +WE +R+RLADCAIGFGKNAIGG++GR YVVTDSGND+P++P+PGTLRHAV
Sbjct: 68  IDDCWRCDPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAV 127

Query: 135 IQNEPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYATNIIIHGIHI 194
           +Q+EPLWIIF+RDM I+L +EL+MNSFKTIDGRGASVH++GGPCI I Y TNIIIHGIHI
Sbjct: 128 VQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHI 187

Query: 195 HDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHGSTA 254
           HDCK+GGNA +R SP+H GW T SDGDGVSI GG  +W+DHCS SNC DGLIDAI GSTA
Sbjct: 188 HDCKQGGNAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTA 247

Query: 255 ITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 314
           IT+SNN+MTHHDKVMLLGHSD++++DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND
Sbjct: 248 ITLSNNHMTHHDKVMLLGHSDTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 307

Query: 315 YTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDLLLN 374
           YTHWEMYAIGGSA+PTI SQGNRF+AP  RF KEVTKHEDAPESEW+ WNWRS GDLLLN
Sbjct: 308 YTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLN 367

Query: 375 GAYFRQSGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 419
           GA+F  SG  ASSSYA+A SL A+PSSLVG +T T+GALNCR+GSRC
Sbjct: 368 GAFFTPSGGAASSSYAKASSLGAKPSSLVGPLTSTSGALNCRKGSRC 408

[Close]

BLAST of CSPI05G17960 vs. Swiss-Prot
Match: PLY22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1)

HSP 1 Score: 647.1 bits (1668), Expect = 1.3e-184
Identity = 307/416 (73.80%), Postives = 350/416 (84.13%), Query Frame = 1


Query: 7   SSSSLYFLLLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGS--RRNLGYL 66
           +SS L F L+      F ++ + LP +         P LVVEEV R IN S  RR LG+ 
Sbjct: 25  NSSYLSFALIFFCCILFSALASSLPVSD--------PELVVEEVHRKINESISRRKLGFF 84

Query: 67  SCGTGNPIDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRP 126
           SCG+GNPIDDCWRCD +WE NRKRLADC IGFGKNAIGG++G  YVVTD GNDDP+NPRP
Sbjct: 85  SCGSGNPIDDCWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRP 144

Query: 127 GTLRHAVIQNEPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYATNI 186
           GTLR+AVIQ+EPLWIIFKRDM I+L +EL+MNSFKT+DGRGASVH++GGPCI I Y TNI
Sbjct: 145 GTLRYAVIQDEPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNI 204

Query: 187 IIHGIHIHDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGLID 246
           IIHG+HIHDCK+GGN  +RDSP+H G+ T SDGDGVSI GG  +W+DHCSLSNCNDGLID
Sbjct: 205 IIHGLHIHDCKQGGNTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLID 264

Query: 247 AIHGSTAITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGY 306
           AI GSTAITISNNY+THH+KVMLLGHSD++ QDKNMQVTIAFNHFGEGLVQRMPRCRHGY
Sbjct: 265 AIRGSTAITISNNYLTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGY 324

Query: 307 FHVVNNDYTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRS 366
           FHVVNNDYTHWEMYAIGGSA+PTI SQGNRF+AP +   KEVTKHEDAPE EWR+WNWRS
Sbjct: 325 FHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRS 384

Query: 367 EGDLLLNGAYFRQSGAG--ASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 419
           EGDLLLNGA+F  SGAG   SSSY++A SL+ARPSS VG+ITI +GAL+C+RGS C
Sbjct: 385 EGDLLLNGAFFTYSGAGPAKSSSYSKASSLAARPSSHVGEITIASGALSCKRGSHC 432

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BLAST of CSPI05G17960 vs. TrEMBL
Match: A0A0A0KNX3_CUCSA (Pectate lyase OS=Cucumis sativus GN=Csa_5G517820 PE=3 SV=1)

HSP 1 Score: 871.7 bits (2251), Expect = 3.6e-250
Identity = 418/418 (100.00%), Postives = 418/418 (100.00%), Query Frame = 1


Query: 1   MAASSSSSSSLYFLLLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGSRRN 60
           MAASSSSSSSLYFLLLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGSRRN
Sbjct: 1   MAASSSSSSSLYFLLLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGSRRN 60

Query: 61  LGYLSCGTGNPIDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPL 120
           LGYLSCGTGNPIDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPL
Sbjct: 61  LGYLSCGTGNPIDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPL 120

Query: 121 NPRPGTLRHAVIQNEPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHY 180
           NPRPGTLRHAVIQNEPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHY
Sbjct: 121 NPRPGTLRHAVIQNEPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHY 180

Query: 181 ATNIIIHGIHIHDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCND 240
           ATNIIIHGIHIHDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCND
Sbjct: 181 ATNIIIHGIHIHDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCND 240

Query: 241 GLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRC 300
           GLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRC
Sbjct: 241 GLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRC 300

Query: 301 RHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHW 360
           RHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHW
Sbjct: 301 RHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHW 360

Query: 361 NWRSEGDLLLNGAYFRQSGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 419
           NWRSEGDLLLNGAYFRQSGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC
Sbjct: 361 NWRSEGDLLLNGAYFRQSGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 418

[Close]

BLAST of CSPI05G17960 vs. TrEMBL
Match: B9GIX5_POPTR (Pectate lyase OS=Populus trichocarpa GN=POPTR_0001s35960g PE=3 SV=1)

HSP 1 Score: 724.9 bits (1870), Expect = 5.5e-206
Identity = 341/404 (84.41%), Postives = 368/404 (91.09%), Query Frame = 1


Query: 16  LLLSLSFFLSMTAP-LPSNSSLPFVHQHPHLVVEEVQRSINGSRRNLGYLSCGTGNPIDD 75
           L + L FF S  AP    +SS+    Q P LVV+EV RSIN SRRNLGYLSCGTGNPIDD
Sbjct: 4   LAILLIFFFSAPAPHFVFSSSI----QDPELVVQEVHRSINASRRNLGYLSCGTGNPIDD 63

Query: 76  CWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRPGTLRHAVIQN 135
           CWRCD NWE NR+RLADCAIGFGKNAIGG+NGR YVVTDSGNDD +NP+PGTLRHAVIQ+
Sbjct: 64  CWRCDPNWERNRQRLADCAIGFGKNAIGGRNGRIYVVTDSGNDDAVNPKPGTLRHAVIQD 123

Query: 136 EPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYATNIIIHGIHIHDC 195
           EPLWIIFKRDMVI+L QELVMNS+KTIDGRGASVH+AGGPCI IHYATNIIIHGIHIHDC
Sbjct: 124 EPLWIIFKRDMVIQLRQELVMNSYKTIDGRGASVHIAGGPCITIHYATNIIIHGIHIHDC 183

Query: 196 KRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHGSTAITI 255
           K+GGN +IRDSP+H+GWWT SDGDGVSI   K IW+DHCSLSNC+DGLIDAIHGSTAITI
Sbjct: 184 KQGGNGDIRDSPRHSGWWTPSDGDGVSIFASKHIWVDHCSLSNCHDGLIDAIHGSTAITI 243

Query: 256 SNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 315
           SNN+MTHHDKVMLLGHSDS+TQDK+MQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
Sbjct: 244 SNNFMTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 303

Query: 316 WEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDLLLNGAY 375
           WEMYAIGGSASPTI SQGNRF+AP  RF KEVTKHEDAPESEWRHWNWRSEGDL+LNGAY
Sbjct: 304 WEMYAIGGSASPTINSQGNRFLAPNRRFNKEVTKHEDAPESEWRHWNWRSEGDLMLNGAY 363

Query: 376 FRQSGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 419
           FRQSGAGASSSYARAYSLSARPSSLVG +T+T+G LNCR+GSRC
Sbjct: 364 FRQSGAGASSSYARAYSLSARPSSLVGSMTLTSGVLNCRKGSRC 403

[Close]

BLAST of CSPI05G17960 vs. TrEMBL
Match: M5WSK8_PRUPE (Pectate lyase OS=Prunus persica GN=PRUPE_ppa006569mg PE=3 SV=1)

HSP 1 Score: 718.4 bits (1853), Expect = 5.1e-204
Identity = 342/410 (83.41%), Postives = 368/410 (89.76%), Query Frame = 1


Query: 9   SSLYFLLLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGSRRNLGYLSCGT 68
           + L  LL+ L ++ FL  TA   S+S L      P LV +EV RSIN SRRNLGYLSCGT
Sbjct: 2   AGLSLLLIFLIITCFL--TATFASSSQL----HDPELVAQEVHRSINASRRNLGYLSCGT 61

Query: 69  GNPIDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRPGTLR 128
           GNPIDDCWRCD NWE NR+RLADCAIGFGK+AIGG+NGR YVVTDSG+DDP+NPRPGTLR
Sbjct: 62  GNPIDDCWRCDPNWEQNRQRLADCAIGFGKDAIGGRNGRIYVVTDSGDDDPVNPRPGTLR 121

Query: 129 HAVIQNEPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYATNIIIHG 188
           HAVIQ+EPLWIIFKRDMV++L QELVMNSFKTIDGRGASVH+AGGPCI IHYATNIIIHG
Sbjct: 122 HAVIQDEPLWIIFKRDMVVQLKQELVMNSFKTIDGRGASVHIAGGPCITIHYATNIIIHG 181

Query: 189 IHIHDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHG 248
           I+IHDCK+ GN NIRDSPQH+GWWT SDGDGVSI GGK IW+DHCSLSNC+DGLIDAIHG
Sbjct: 182 INIHDCKQAGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCHDGLIDAIHG 241

Query: 249 STAITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVV 308
           STAITISNNYMTHHDKVMLLGHSDS+TQDK MQVT+AFNHFGEGLVQRMPRCRHGYFHVV
Sbjct: 242 STAITISNNYMTHHDKVMLLGHSDSYTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVV 301

Query: 309 NNDYTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDL 368
           NNDYTHWEMYAIGGSA+PTI SQGNRF+AP  RF KEVTKHEDAPESEWR WNWRSEGDL
Sbjct: 302 NNDYTHWEMYAIGGSAAPTINSQGNRFLAPNTRFNKEVTKHEDAPESEWRGWNWRSEGDL 361

Query: 369 LLNGAYFRQSGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 419
           +LNGAYFRQSGAGASSSYARA SLSARPSSLVG IT TAGAL CR+GSRC
Sbjct: 362 MLNGAYFRQSGAGASSSYARASSLSARPSSLVGSITTTAGALICRKGSRC 405

[Close]

BLAST of CSPI05G17960 vs. TrEMBL
Match: F6GX67_VITVI (Pectate lyase OS=Vitis vinifera GN=VIT_14s0219g00230 PE=3 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 3.7e-202
Identity = 332/401 (82.79%), Postives = 365/401 (91.02%), Query Frame = 1


Query: 18  LSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGSRRNLGYLSCGTGNPIDDCWR 77
           +SL F  S+  P+   SS P   Q P +VV+EV RSIN SRRNLGY SCGTGNPIDDCWR
Sbjct: 6   MSLLFLFSLLPPI-LGSSAPV--QDPEVVVQEVHRSINASRRNLGYFSCGTGNPIDDCWR 65

Query: 78  CDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRPGTLRHAVIQNEPL 137
           CD+NW+ NR+RLADCAIGFGK+A+GGKNGR YVVTDS +DDP+NPRPGTLRHAVIQ+EPL
Sbjct: 66  CDANWDKNRQRLADCAIGFGKDAMGGKNGRIYVVTDSEDDDPVNPRPGTLRHAVIQDEPL 125

Query: 138 WIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYATNIIIHGIHIHDCKRG 197
           WIIFKRDMVIKL QELVMNSFKTIDGRGASVH+AGGPCI IHYA+NIIIHG+HIHDCK+G
Sbjct: 126 WIIFKRDMVIKLKQELVMNSFKTIDGRGASVHIAGGPCITIHYASNIIIHGLHIHDCKQG 185

Query: 198 GNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHGSTAITISNN 257
           GNANIR+SP H+GWWT SDGDGVSI GG+ IW+DHCSLSNC+DGLIDAIHGSTAITISNN
Sbjct: 186 GNANIRNSPHHSGWWTVSDGDGVSIFGGRHIWVDHCSLSNCHDGLIDAIHGSTAITISNN 245

Query: 258 YMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEM 317
           +MTHHDKVMLLGHSDS+T+DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEM
Sbjct: 246 FMTHHDKVMLLGHSDSYTEDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEM 305

Query: 318 YAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDLLLNGAYFRQ 377
           YAIGGSA PTI SQGNRF+AP +RF+K VTKHEDAPESEWRHWNWRSEGDL+LNGA+F Q
Sbjct: 306 YAIGGSADPTINSQGNRFLAPNDRFKKAVTKHEDAPESEWRHWNWRSEGDLMLNGAFFLQ 365

Query: 378 SGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 419
           S AGASSSYARA SLSARPSSLVG IT+ +GAL CR+GSRC
Sbjct: 366 SAAGASSSYARASSLSARPSSLVGSITLGSGALGCRKGSRC 403

[Close]

BLAST of CSPI05G17960 vs. TrEMBL
Match: Q9M505_VITVI (Pectate lyase OS=Vitis vinifera GN=Pel PE=2 SV=1)

HSP 1 Score: 711.8 bits (1836), Expect = 4.8e-202
Identity = 330/401 (82.29%), Postives = 364/401 (90.77%), Query Frame = 1


Query: 18  LSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGSRRNLGYLSCGTGNPIDDCWR 77
           +SL F  S+  P+  +   P   Q P +VV+EV RSIN SRRNLGY SCGTGNPIDDCWR
Sbjct: 1   MSLLFLFSLLPPILGS---PAPVQDPEVVVQEVHRSINASRRNLGYFSCGTGNPIDDCWR 60

Query: 78  CDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRPGTLRHAVIQNEPL 137
           CD+NW+ NR+RLADCAIGFGK+A+GGKNGR YVVTDS +DDP+NPRPGTLRHAVIQ+EPL
Sbjct: 61  CDANWDKNRQRLADCAIGFGKDAMGGKNGRIYVVTDSEDDDPVNPRPGTLRHAVIQDEPL 120

Query: 138 WIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYATNIIIHGIHIHDCKRG 197
           WIIFKRDMVIKL QELVMNSFKTIDGRGASVH+AGGPCI IHYA+NIIIHG+HIHDCK+G
Sbjct: 121 WIIFKRDMVIKLKQELVMNSFKTIDGRGASVHIAGGPCITIHYASNIIIHGLHIHDCKQG 180

Query: 198 GNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHGSTAITISNN 257
           GNANIR+SP H+GWWT SDGDGVSI GG+ IW+DHCSLSNC+DGLIDAIHGSTAITISNN
Sbjct: 181 GNANIRNSPHHSGWWTVSDGDGVSIFGGRHIWVDHCSLSNCHDGLIDAIHGSTAITISNN 240

Query: 258 YMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEM 317
           +MTHHDKVMLLGHSDS+T+DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEM
Sbjct: 241 FMTHHDKVMLLGHSDSYTEDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEM 300

Query: 318 YAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDLLLNGAYFRQ 377
           YAIGGSA PTI SQGNRF+AP +RF+K VTKHEDAPESEWRHWNWRSEGDL+LNGA+F Q
Sbjct: 301 YAIGGSADPTINSQGNRFLAPNDRFKKAVTKHEDAPESEWRHWNWRSEGDLMLNGAFFLQ 360

Query: 378 SGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 419
           SGAGASSSYAR  SLSARPSSLVG IT+ +GAL CR+GSRC
Sbjct: 361 SGAGASSSYARRSSLSARPSSLVGSITLGSGALGCRKGSRC 398

[Close]

BLAST of CSPI05G17960 vs. TAIR10
Match: AT3G27400.1 (AT3G27400.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 673.7 bits (1737), Expect = 7.3e-194
Identity = 319/416 (76.68%), Postives = 356/416 (85.58%), Query Frame = 1


Query: 4   SSSSSSSLYFLLLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSI-NGSRRNLG 63
           S S++   Y  LLLL++   L+ ++ LP +       Q P+LVV++V RS+ N SRR+L 
Sbjct: 3   SYSNNHFAYAFLLLLTIGNTLAFSSSLPDHV------QDPNLVVDDVNRSVFNASRRSLA 62

Query: 64  YLSCGTGNPIDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNP 123
           YLSC TGNPIDDCWRCD NWETNR+RLADCAIGFGKNAIGG+ GR YVVTD  NDDP+NP
Sbjct: 63  YLSCRTGNPIDDCWRCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNP 122

Query: 124 RPGTLRHAVIQNEPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYAT 183
           RPGTLR+AV Q EPLWIIFKRDMVI+L +EL++ SFKTIDGRG+SVH+  GPC+KIHYAT
Sbjct: 123 RPGTLRYAVTQEEPLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYAT 182

Query: 184 NIIIHGIHIHDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGL 243
           NIIIHGI+IHDCK G    I+D P H GWW  SDGD V+I GGK +WIDHCSLSNC+DGL
Sbjct: 183 NIIIHGINIHDCKPGSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGL 242

Query: 244 IDAIHGSTAITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRH 303
           IDAIHGSTAITISNN+MTHHDKVMLLGHSDS+TQDKNMQVTIAFNHFGEGLVQRMPRCRH
Sbjct: 243 IDAIHGSTAITISNNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRH 302

Query: 304 GYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNW 363
           GYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRF+AP  RF KEVTKHEDAPES+WR WNW
Sbjct: 303 GYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNW 362

Query: 364 RSEGDLLLNGAYFRQSGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 419
           RSEGD+LLNGAYFR+SGA A S+YARA SLSARPSSLVG IT TAG L+CRRG RC
Sbjct: 363 RSEGDMLLNGAYFRESGAEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 412

[Close]

BLAST of CSPI05G17960 vs. TAIR10
Match: AT4G24780.1 (AT4G24780.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 651.7 bits (1680), Expect = 3.0e-187
Identity = 308/407 (75.68%), Postives = 350/407 (86.00%), Query Frame = 1


Query: 15  LLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGS---RRNLGYLSCGTGNP 74
           L +  +SF L   APL  +S +P     P  VVEEV +SIN S   RR LGYLSC TGNP
Sbjct: 8   LFITIVSFLLY--APLFLSSPVP----DPESVVEEVHKSINASVAGRRKLGYLSCTTGNP 67

Query: 75  IDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRPGTLRHAV 134
           IDDCWRCD +WE +R+RLADCAIGFGKNAIGG++GR YVVTDSGND+P++P+PGTLRHAV
Sbjct: 68  IDDCWRCDPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAV 127

Query: 135 IQNEPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYATNIIIHGIHI 194
           +Q+EPLWIIF+RDM I+L +EL+MNSFKTIDGRGASVH++GGPCI I Y TNIIIHGIHI
Sbjct: 128 VQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHI 187

Query: 195 HDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHGSTA 254
           HDCK+GGNA +R SP+H GW T SDGDGVSI GG  +W+DHCS SNC DGLIDAI GSTA
Sbjct: 188 HDCKQGGNAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTA 247

Query: 255 ITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 314
           IT+SNN+MTHHDKVMLLGHSD++++DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND
Sbjct: 248 ITLSNNHMTHHDKVMLLGHSDTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 307

Query: 315 YTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDLLLN 374
           YTHWEMYAIGGSA+PTI SQGNRF+AP  RF KEVTKHEDAPESEW+ WNWRS GDLLLN
Sbjct: 308 YTHWEMYAIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLN 367

Query: 375 GAYFRQSGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 419
           GA+F  SG  ASSSYA+A SL A+PSSLVG +T T+GALNCR+GSRC
Sbjct: 368 GAFFTPSGGAASSSYAKASSLGAKPSSLVGPLTSTSGALNCRKGSRC 408

[Close]

BLAST of CSPI05G17960 vs. TAIR10
Match: AT5G63180.1 (AT5G63180.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 647.1 bits (1668), Expect = 7.3e-186
Identity = 307/416 (73.80%), Postives = 350/416 (84.13%), Query Frame = 1


Query: 7   SSSSLYFLLLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGS--RRNLGYL 66
           +SS L F L+      F ++ + LP +         P LVVEEV R IN S  RR LG+ 
Sbjct: 25  NSSYLSFALIFFCCILFSALASSLPVSD--------PELVVEEVHRKINESISRRKLGFF 84

Query: 67  SCGTGNPIDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRP 126
           SCG+GNPIDDCWRCD +WE NRKRLADC IGFGKNAIGG++G  YVVTD GNDDP+NPRP
Sbjct: 85  SCGSGNPIDDCWRCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRP 144

Query: 127 GTLRHAVIQNEPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYATNI 186
           GTLR+AVIQ+EPLWIIFKRDM I+L +EL+MNSFKT+DGRGASVH++GGPCI I Y TNI
Sbjct: 145 GTLRYAVIQDEPLWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNI 204

Query: 187 IIHGIHIHDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGLID 246
           IIHG+HIHDCK+GGN  +RDSP+H G+ T SDGDGVSI GG  +W+DHCSLSNCNDGLID
Sbjct: 205 IIHGLHIHDCKQGGNTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLID 264

Query: 247 AIHGSTAITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGY 306
           AI GSTAITISNNY+THH+KVMLLGHSD++ QDKNMQVTIAFNHFGEGLVQRMPRCRHGY
Sbjct: 265 AIRGSTAITISNNYLTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGY 324

Query: 307 FHVVNNDYTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRS 366
           FHVVNNDYTHWEMYAIGGSA+PTI SQGNRF+AP +   KEVTKHEDAPE EWR+WNWRS
Sbjct: 325 FHVVNNDYTHWEMYAIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRS 384

Query: 367 EGDLLLNGAYFRQSGAG--ASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 419
           EGDLLLNGA+F  SGAG   SSSY++A SL+ARPSS VG+ITI +GAL+C+RGS C
Sbjct: 385 EGDLLLNGAFFTYSGAGPAKSSSYSKASSLAARPSSHVGEITIASGALSCKRGSHC 432

[Close]

BLAST of CSPI05G17960 vs. TAIR10
Match: AT1G67750.1 (AT1G67750.1 Pectate lyase family protein)

HSP 1 Score: 641.3 bits (1653), Expect = 4.0e-184
Identity = 302/404 (74.75%), Postives = 339/404 (83.91%), Query Frame = 1


Query: 15  LLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGSRRNLGYLSCGTGNPIDD 74
           L+ LSLS F  +   L            P LVV+EV   IN SRRNLG LSCGTGNPIDD
Sbjct: 5   LVHLSLSLFSCLLLVLSPTFIASTPVSEPELVVQEVNEKINASRRNLGVLSCGTGNPIDD 64

Query: 75  CWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRPGTLRHAVIQN 134
           CWRCD  WE NR+RLADCAIGFGK+AIGG++G+ YVVTDS + D +NP+PGTLRHAVIQ+
Sbjct: 65  CWRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQD 124

Query: 135 EPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYATNIIIHGIHIHDC 194
           EPLWIIF RDMVIKL +EL+MNSFKTIDGRGASVH+AGG CI + Y TNIIIHG++IHDC
Sbjct: 125 EPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHDC 184

Query: 195 KRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHGSTAITI 254
           KR GNA +RDSP H GW TASDGD VSI GG  +W+DHCSLSNC DGLIDAIHGSTAITI
Sbjct: 185 KRKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAITI 244

Query: 255 SNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 314
           SNNY++HH+KVMLLGHSDS+T+DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
Sbjct: 245 SNNYLSHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 304

Query: 315 WEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDLLLNGAY 374
           W+MYAIGGSA+PTI SQGNRF+AP +   KEVTK+EDAP S+W+ WNWRSEGDL LNGA+
Sbjct: 305 WQMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLFLNGAF 364

Query: 375 FRQSGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 419
           F  SG GASSSYA+A SLSARPSSLV  +T  AGAL CR+GSRC
Sbjct: 365 FTPSGGGASSSYAKASSLSARPSSLVASVTSNAGALFCRKGSRC 408

[Close]

BLAST of CSPI05G17960 vs. TAIR10
Match: AT3G07010.1 (AT3G07010.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 589.7 bits (1519), Expect = 1.4e-168
Identity = 278/410 (67.80%), Postives = 325/410 (79.27%), Query Frame = 1


Query: 11  LYFLLLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGS--RRNLGYLSCGT 70
           + F   LL  + F+ + A   + +      ++P  V   V  SI  S  RR LGY SC T
Sbjct: 7   ILFASALLLTALFIGVNASRSNETWHEHAVENPDEVAAMVDMSIRNSTERRRLGYFSCAT 66

Query: 71  GNPIDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRPGTLR 130
           GNPIDDCWRCD  W+  RKRLADC+IGFG+NAIGG++GRFYVVTD G+DDP+NP PGTLR
Sbjct: 67  GNPIDDCWRCDRKWQLRRKRLADCSIGFGRNAIGGRDGRFYVVTDPGDDDPVNPIPGTLR 126

Query: 131 HAVIQNEPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYATNIIIHG 190
           HAVIQ+EPLWIIFKRDMVI L QEL+MNSFKTIDGRG +VH+A G C+ I Y TNII+HG
Sbjct: 127 HAVIQDEPLWIIFKRDMVITLKQELIMNSFKTIDGRGVNVHIANGACLTIQYVTNIIVHG 186

Query: 191 IHIHDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHG 250
           IH+HDCK  GNA +R SP H G+ + +DGD +SI G   IWIDH SLSNC DGL+DA+  
Sbjct: 187 IHVHDCKPTGNAMVRSSPSHYGFRSMADGDAISIFGSSHIWIDHNSLSNCADGLVDAVMS 246

Query: 251 STAITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVV 310
           STAIT+SNN+ THH++VMLLGHSDS+T+DK MQVTIA+NHFGEGL+QRMPRCRHGYFHVV
Sbjct: 247 STAITVSNNFFTHHNEVMLLGHSDSYTRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVV 306

Query: 311 NNDYTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDL 370
           NNDYTHWEMYAIGGSA PTI SQGNRF+AP N F KEVTK E   ES+W+HWNWRSEGDL
Sbjct: 307 NNDYTHWEMYAIGGSAGPTINSQGNRFLAPVNPFAKEVTKREYTGESKWKHWNWRSEGDL 366

Query: 371 LLNGAYFRQSGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 419
            LNGA+F +SGAGA ++YARA SLSA+ SSLVG +T  +GALNCR G RC
Sbjct: 367 FLNGAFFTRSGAGAGANYARASSLSAKSSSLVGTMTSYSGALNCRAGRRC 416

[Close]

BLAST of CSPI05G17960 vs. NCBI nr
Match: gi|449450042|ref|XP_004142773.1| (PREDICTED: pectate lyase-like [Cucumis sativus])

HSP 1 Score: 871.7 bits (2251), Expect = 5.2e-250
Identity = 418/418 (100.00%), Postives = 418/418 (100.00%), Query Frame = 1


Query: 1   MAASSSSSSSLYFLLLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGSRRN 60
           MAASSSSSSSLYFLLLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGSRRN
Sbjct: 1   MAASSSSSSSLYFLLLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGSRRN 60

Query: 61  LGYLSCGTGNPIDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPL 120
           LGYLSCGTGNPIDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPL
Sbjct: 61  LGYLSCGTGNPIDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPL 120

Query: 121 NPRPGTLRHAVIQNEPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHY 180
           NPRPGTLRHAVIQNEPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHY
Sbjct: 121 NPRPGTLRHAVIQNEPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHY 180

Query: 181 ATNIIIHGIHIHDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCND 240
           ATNIIIHGIHIHDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCND
Sbjct: 181 ATNIIIHGIHIHDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCND 240

Query: 241 GLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRC 300
           GLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRC
Sbjct: 241 GLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRC 300

Query: 301 RHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHW 360
           RHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHW
Sbjct: 301 RHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHW 360

Query: 361 NWRSEGDLLLNGAYFRQSGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 419
           NWRSEGDLLLNGAYFRQSGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC
Sbjct: 361 NWRSEGDLLLNGAYFRQSGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 418

[Close]

BLAST of CSPI05G17960 vs. NCBI nr
Match: gi|659117905|ref|XP_008458848.1| (PREDICTED: pectate lyase-like [Cucumis melo])

HSP 1 Score: 837.8 bits (2163), Expect = 8.3e-240
Identity = 399/416 (95.91%), Postives = 409/416 (98.32%), Query Frame = 1


Query: 4   SSSSSSSLYFLLLLLSLSFFLSM-TAPLPSNSSLPFVHQHPHLVVEEVQRSINGSRRNLG 63
           ++SSSSSLYFL LLLSL FFLSM TAP+PSNSSLPFVHQHPHL VEEVQRSINGSRRNLG
Sbjct: 2   AASSSSSLYFLFLLLSLCFFLSMSTAPIPSNSSLPFVHQHPHLAVEEVQRSINGSRRNLG 61

Query: 64  YLSCGTGNPIDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNP 123
           YLSCGTGNPIDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTD+ +DDPLNP
Sbjct: 62  YLSCGTGNPIDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDARDDDPLNP 121

Query: 124 RPGTLRHAVIQNEPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYAT 183
           RPGTLRHAVIQNEPLWIIFKRDMVI+L QELVMNSFKTIDGRGASVH+AGGPCIKIHYAT
Sbjct: 122 RPGTLRHAVIQNEPLWIIFKRDMVIQLEQELVMNSFKTIDGRGASVHVAGGPCIKIHYAT 181

Query: 184 NIIIHGIHIHDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGL 243
           NIIIHGIHIHDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGL
Sbjct: 182 NIIIHGIHIHDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGL 241

Query: 244 IDAIHGSTAITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRH 303
           IDAIHGSTAITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRH
Sbjct: 242 IDAIHGSTAITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRH 301

Query: 304 GYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNW 363
           GYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWR+WNW
Sbjct: 302 GYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRYWNW 361

Query: 364 RSEGDLLLNGAYFRQSGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 419
           RSEGD+LLNGAYFRQSGAGA SSYARAYSLSARPSSLVGDIT+TAGALNCRRGSRC
Sbjct: 362 RSEGDMLLNGAYFRQSGAGARSSYARAYSLSARPSSLVGDITLTAGALNCRRGSRC 417

[Close]

BLAST of CSPI05G17960 vs. NCBI nr
Match: gi|224060175|ref|XP_002300069.1| (pectate lyase family protein [Populus trichocarpa])

HSP 1 Score: 724.9 bits (1870), Expect = 7.8e-206
Identity = 341/404 (84.41%), Postives = 368/404 (91.09%), Query Frame = 1


Query: 16  LLLSLSFFLSMTAP-LPSNSSLPFVHQHPHLVVEEVQRSINGSRRNLGYLSCGTGNPIDD 75
           L + L FF S  AP    +SS+    Q P LVV+EV RSIN SRRNLGYLSCGTGNPIDD
Sbjct: 4   LAILLIFFFSAPAPHFVFSSSI----QDPELVVQEVHRSINASRRNLGYLSCGTGNPIDD 63

Query: 76  CWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRPGTLRHAVIQN 135
           CWRCD NWE NR+RLADCAIGFGKNAIGG+NGR YVVTDSGNDD +NP+PGTLRHAVIQ+
Sbjct: 64  CWRCDPNWERNRQRLADCAIGFGKNAIGGRNGRIYVVTDSGNDDAVNPKPGTLRHAVIQD 123

Query: 136 EPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYATNIIIHGIHIHDC 195
           EPLWIIFKRDMVI+L QELVMNS+KTIDGRGASVH+AGGPCI IHYATNIIIHGIHIHDC
Sbjct: 124 EPLWIIFKRDMVIQLRQELVMNSYKTIDGRGASVHIAGGPCITIHYATNIIIHGIHIHDC 183

Query: 196 KRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHGSTAITI 255
           K+GGN +IRDSP+H+GWWT SDGDGVSI   K IW+DHCSLSNC+DGLIDAIHGSTAITI
Sbjct: 184 KQGGNGDIRDSPRHSGWWTPSDGDGVSIFASKHIWVDHCSLSNCHDGLIDAIHGSTAITI 243

Query: 256 SNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 315
           SNN+MTHHDKVMLLGHSDS+TQDK+MQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
Sbjct: 244 SNNFMTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 303

Query: 316 WEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDLLLNGAY 375
           WEMYAIGGSASPTI SQGNRF+AP  RF KEVTKHEDAPESEWRHWNWRSEGDL+LNGAY
Sbjct: 304 WEMYAIGGSASPTINSQGNRFLAPNRRFNKEVTKHEDAPESEWRHWNWRSEGDLMLNGAY 363

Query: 376 FRQSGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 419
           FRQSGAGASSSYARAYSLSARPSSLVG +T+T+G LNCR+GSRC
Sbjct: 364 FRQSGAGASSSYARAYSLSARPSSLVGSMTLTSGVLNCRKGSRC 403

[Close]

BLAST of CSPI05G17960 vs. NCBI nr
Match: gi|743933273|ref|XP_011010949.1| (PREDICTED: pectate lyase-like [Populus euphratica])

HSP 1 Score: 724.5 bits (1869), Expect = 1.0e-205
Identity = 342/404 (84.65%), Postives = 369/404 (91.34%), Query Frame = 1


Query: 16  LLLSLSFFLSMTAP-LPSNSSLPFVHQHPHLVVEEVQRSINGSRRNLGYLSCGTGNPIDD 75
           L + L FFLS  A  L  +SS+    Q P LVV+EVQRSIN SRRNLGYLSCGTGNPIDD
Sbjct: 4   LAILLIFFLSAPATHLVFSSSI----QDPELVVQEVQRSINASRRNLGYLSCGTGNPIDD 63

Query: 76  CWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRPGTLRHAVIQN 135
           CWRCD NWE NR+RLADCAIGFGKNAIGG+NGR YVVTDSGNDD +NP+PGTLRHAVIQ+
Sbjct: 64  CWRCDPNWERNRQRLADCAIGFGKNAIGGRNGRIYVVTDSGNDDAVNPKPGTLRHAVIQD 123

Query: 136 EPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYATNIIIHGIHIHDC 195
           EPLWIIFKRDMVI+L QELVMNS+KTIDGRGASVH+AGGPCI IHYATNIIIHGIHIHDC
Sbjct: 124 EPLWIIFKRDMVIQLRQELVMNSYKTIDGRGASVHIAGGPCITIHYATNIIIHGIHIHDC 183

Query: 196 KRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHGSTAITI 255
           K+GGN +IRDSP+H GWWT SDGDGVSI   K IW+DHCSLSNC+DGLIDAIHGSTAITI
Sbjct: 184 KQGGNGDIRDSPRHFGWWTPSDGDGVSIFASKHIWVDHCSLSNCHDGLIDAIHGSTAITI 243

Query: 256 SNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 315
           SNN+MTHHDKVMLLGHSDS+TQDK+MQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
Sbjct: 244 SNNFMTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 303

Query: 316 WEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDLLLNGAY 375
           WEMYAIGGSA+PTI SQGNRF+AP  RF KEVTKHEDAPESEWRHWNWRSEGDL+LNGAY
Sbjct: 304 WEMYAIGGSAAPTINSQGNRFLAPNRRFNKEVTKHEDAPESEWRHWNWRSEGDLMLNGAY 363

Query: 376 FRQSGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 419
           FRQSGAGASSSYARAYSLSARPSSLVG +T+T+G LNCR+GSRC
Sbjct: 364 FRQSGAGASSSYARAYSLSARPSSLVGSMTLTSGVLNCRKGSRC 403

[Close]

BLAST of CSPI05G17960 vs. NCBI nr
Match: gi|595934944|ref|XP_007215475.1| (hypothetical protein PRUPE_ppa006569mg [Prunus persica])

HSP 1 Score: 718.4 bits (1853), Expect = 7.3e-204
Identity = 342/410 (83.41%), Postives = 368/410 (89.76%), Query Frame = 1


Query: 9   SSLYFLLLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGSRRNLGYLSCGT 68
           + L  LL+ L ++ FL  TA   S+S L      P LV +EV RSIN SRRNLGYLSCGT
Sbjct: 2   AGLSLLLIFLIITCFL--TATFASSSQL----HDPELVAQEVHRSINASRRNLGYLSCGT 61

Query: 69  GNPIDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRPGTLR 128
           GNPIDDCWRCD NWE NR+RLADCAIGFGK+AIGG+NGR YVVTDSG+DDP+NPRPGTLR
Sbjct: 62  GNPIDDCWRCDPNWEQNRQRLADCAIGFGKDAIGGRNGRIYVVTDSGDDDPVNPRPGTLR 121

Query: 129 HAVIQNEPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYATNIIIHG 188
           HAVIQ+EPLWIIFKRDMV++L QELVMNSFKTIDGRGASVH+AGGPCI IHYATNIIIHG
Sbjct: 122 HAVIQDEPLWIIFKRDMVVQLKQELVMNSFKTIDGRGASVHIAGGPCITIHYATNIIIHG 181

Query: 189 IHIHDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHG 248
           I+IHDCK+ GN NIRDSPQH+GWWT SDGDGVSI GGK IW+DHCSLSNC+DGLIDAIHG
Sbjct: 182 INIHDCKQAGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCHDGLIDAIHG 241

Query: 249 STAITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVV 308
           STAITISNNYMTHHDKVMLLGHSDS+TQDK MQVT+AFNHFGEGLVQRMPRCRHGYFHVV
Sbjct: 242 STAITISNNYMTHHDKVMLLGHSDSYTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVV 301

Query: 309 NNDYTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDL 368
           NNDYTHWEMYAIGGSA+PTI SQGNRF+AP  RF KEVTKHEDAPESEWR WNWRSEGDL
Sbjct: 302 NNDYTHWEMYAIGGSAAPTINSQGNRFLAPNTRFNKEVTKHEDAPESEWRGWNWRSEGDL 361

Query: 369 LLNGAYFRQSGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 419
           +LNGAYFRQSGAGASSSYARA SLSARPSSLVG IT TAGAL CR+GSRC
Sbjct: 362 MLNGAYFRQSGAGASSSYARASSLSARPSSLVGSITTTAGALICRKGSRC 405

The following BLAST results are available for this feature:

BLAST of CSPI05G17960 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PLY_ZINVI	9.0e-194	78.86	Pectate lyase OS=Zinnia violacea PE=1 SV=1	[more]
PLY11_ARATH	1.3e-192	76.68	Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=3 SV=2	[more]
PLY18_SOLLC	4.0e-186	77.28	Probable pectate lyase P18 OS=Solanum lycopersicum GN=9612 PE=2 SV=1	[more]
PLY18_ARATH	5.3e-186	75.68	Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2	[more]
PLY22_ARATH	1.3e-184	73.80	Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1	[more]

BLAST of CSPI05G17960 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNX3_CUCSA	3.6e-250	100.00	Pectate lyase OS=Cucumis sativus GN=Csa_5G517820 PE=3 SV=1	[more]
B9GIX5_POPTR	5.5e-206	84.41	Pectate lyase OS=Populus trichocarpa GN=POPTR_0001s35960g PE=3 SV=1	[more]
M5WSK8_PRUPE	5.1e-204	83.41	Pectate lyase OS=Prunus persica GN=PRUPE_ppa006569mg PE=3 SV=1	[more]
F6GX67_VITVI	3.7e-202	82.79	Pectate lyase OS=Vitis vinifera GN=VIT_14s0219g00230 PE=3 SV=1	[more]
Q9M505_VITVI	4.8e-202	82.29	Pectate lyase OS=Vitis vinifera GN=Pel PE=2 SV=1	[more]

BLAST of CSPI05G17960 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G27400.1	7.3e-194	76.68	Pectin lyase-like superfamily protein	[more]
AT4G24780.1	3.0e-187	75.68	Pectin lyase-like superfamily protein	[more]
AT5G63180.1	7.3e-186	73.80	Pectin lyase-like superfamily protein	[more]
AT1G67750.1	4.0e-184	74.75	Pectate lyase family protein	[more]
AT3G07010.1	1.4e-168	67.80	Pectin lyase-like superfamily protein	[more]

BLAST of CSPI05G17960 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449450042\|ref\|XP_004142773.1\|	5.2e-250	100.00	PREDICTED: pectate lyase-like [Cucumis sativus]	[more]
gi\|659117905\|ref\|XP_008458848.1\|	8.3e-240	95.91	PREDICTED: pectate lyase-like [Cucumis melo]	[more]
gi\|224060175\|ref\|XP_002300069.1\|	7.8e-206	84.41	pectate lyase family protein [Populus trichocarpa]	[more]
gi\|743933273\|ref\|XP_011010949.1\|	1.0e-205	84.65	PREDICTED: pectate lyase-like [Populus euphratica]	[more]
gi\|595934944\|ref\|XP_007215475.1\|	7.3e-204	83.41	hypothetical protein PRUPE_ppa006569mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002022	Pec_lyase
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold
IPR018082	AmbAllergen

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045490	pectin catabolic process
biological_process	GO:0009624	response to nematode
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030570	pectate lyase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G17960.1	CSPI05G17960.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002022	Pectate lyase/Amb allergen	PFAM	PF00544	Pec_lyase_C	coord: 153..335 score: 1.4
IPR002022	Pectate lyase/Amb allergen	SMART	SM00656	amb_all	coord: 144..341 score: 1.3E
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 51..412 score: 1.44E
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 70..410 score: 1.3E
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 318..337 score: 5.0E-84coord: 296..315 score: 5.0E-84coord: 360..384 score: 5.0E-84coord: 92..109 score: 5.0E-84coord: 152..168 score: 5.0E-84coord: 389..412 score: 5.0E-84coord: 216..237 score: 5.0E-84coord: 116..141 score: 5.0
None	No IPR available	PANTHER	PTHR31683	FAMILY NOT NAMED	coord: 1..418 score:
None	No IPR available	PANTHER	PTHR31683:SF29	PECTATE LYASE 11-RELATED	coord: 1..418 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI05G17960	Cla004642	Watermelon (97103) v1	cpiwmB369
CSPI05G17960	Csa5G517820	Cucumber (Chinese Long) v2	cpicuB239
CSPI05G17960	MELO3C021607	Melon (DHL92) v3.5.1	cpimeB350
CSPI05G17960	ClCG09G019510	Watermelon (Charleston Gray)	cpiwcgB355
CSPI05G17960	Lsi02G016140	Bottle gourd (USVL1VR-Ls)	cpilsiB351
CSPI05G17960	MELO3C021607.2	Melon (DHL92) v3.6.1	cpimedB340
CSPI05G17960	CsaV3_5G026870	Cucumber (Chinese Long) v3	cpicucB284
CSPI05G17960	Cla97C09G180950	Watermelon (97103) v2	cpiwmbB428
CSPI05G17960	Bhi06G000499	Wax gourd	cpiwgoB474
CSPI05G17960	Cucsa.011030	Cucumber (Gy14) v1	cgycpiB296
CSPI05G17960	CmaCh04G026640	Cucurbita maxima (Rimu)	cmacpiB732
CSPI05G17960	CmoCh04G027910	Cucurbita moschata (Rifu)	cmocpiB724
CSPI05G17960	Cp4.1LG01g23700	Cucurbita pepo (Zucchini)	cpecpiB416
CSPI05G17960	CsGy5G017640	Cucumber (Gy14) v2	cgybcpiB225
CSPI05G17960	Carg04480	Silver-seed gourd	carcpiB0721

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI05G17960	Silver-seed gourd	carcpiB0298
CSPI05G17960	Cucumber (Chinese Long) v3	cpicucB293
CSPI05G17960	Watermelon (97103) v2	cpiwmbB416
CSPI05G17960	Wild cucumber (PI 183967)	cpicpiB175
CSPI05G17960	Cucumber (Gy14) v1	cgycpiB259
CSPI05G17960	Cucurbita maxima (Rimu)	cmacpiB305
CSPI05G17960	Cucurbita moschata (Rifu)	cmocpiB297
CSPI05G17960	Watermelon (Charleston Gray)	cpiwcgB422
CSPI05G17960	Cucurbita pepo (Zucchini)	cpecpiB178
CSPI05G17960	Cucurbita pepo (Zucchini)	cpecpiB683
CSPI05G17960	Melon (DHL92) v3.6.1	cpimedB357