CmoCh04G027910 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G027910
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Pectate lyase (4.2.2.2)
Location	Cmo_Chr04 : 20087052 .. 20090039 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGATTTGTTCTCCAATGGCGGCTTCCTTTTTCTTTTTGCTTCTCTTACCACTCTCTTTCTTCTTCACTGATTCCTCCTTGGCTTCTGTTCAAGATCCTCATCTTGTCGTTCAAGAAGTTCAAAGGTATACATTTTTTGTTTTTGTTTTTCGTTTCTTGTTTATGGTTCAGTTTTGTGGAAGATTTGGACCCTTTTAACAAAATGTGGTTTCTTCTAACATGTTTTTAGTGTTTCAACTACAAAAGTTTCATATAAACATGTATGTGAATCTTCCTTTCTTACTCATTATTATCTCATTTCAACATTAGAATCCATTATTCACTTTCGACATTGATACATTCCTTAATTATAAACCTGTAACAGTTCAAATTCATTGTTAGTAGATATGGTCCGTTTTGACCCGTCACTTATTGTCGTCAGACTCACGATTTTAAAACGTGTTTGCTAGGAAGAGATTTCCACACCCTTATAAGAAATGTTTCGTTCCCCTTTCTAACCAATGTGGGATCAGAGCTAAACACCGAGTGGTGTGCCAGCGAGCAACCCTTGTAAGAAATGTTTCGTTCCCTTTTCTAACCAATGTGGAATCAGAGCTAAACACCGAGCAGTGTGCCAGCAAGGACGTTGACGCCTCGAAGGGGTGGATTGTGAGATCCCCACATCGGTAGGAGAGGAGAACGAAACATTTCTCATAAGGGTATGGAAACATCTCCCTAACAAACACGTTTTAAAATCGTAAGACTGACTTGAACCAAATTGGACAACAACGAATTAGTAAGTATATTTCATACCTACAACTTTAAGAGATTGTTCTTTTTAGACTTTCTCTTTCGAGGTTTCCACGTCCTTATAAATGATGGTTTGTTCTCTTCTCGAACAAATGTGTGACATCACAAGTACACTCATAATGTTCTCTTTAATCATGTGTCTTATTTTTAAATTGTCAGGAGCATCAATGAATCGAGGACAAGAAGAAACTTGGGATATTTGTCATGTAGAACAGGAAACCCAATAGACGACTGCTGGAGATGCGACCCCAATTGGGAAACCAACCGAAAGCGCTTAGCCGACTGCGCCATTGGGTTTGGCAAAAACGCCATCGGCGGCAGAAACGGCCGCTTCTACGTCGTCACAGACGCCGGCGACGACGACCCTCTCAACCCCAGACCAGGAACCCTCCGCCACGCCGTCATCCAAAACGAGCCCTTATGGATCATCTTCAAGCGTGACATGGTAATCCAACTCAGACAAGAACTAGTGATGAACTCGTTCAAGACCATCGACGGGCGTGGGGCCAGCGTGCATGTGGCAGGTGGGCCATGCATCACCATCCACTACGCCACAAACATCATAATCCACGGCATCCACATACATGACTGTAAGAGAGGGGGCAATGGTAACATACGGGACTCCCCACAGCACTCCGGGTGGTGGACTATATCGGACGGTGATGGAGTGTCGATCTTTGGTGGCAAGAATATTTGGGTTGACCATTGTTCTTTGTCTAACTGTAATGATGGGTTGATCGACGCGATTCATGGTTCGACGGCGATCACGATTTCGAATAATTACATGACTCATCATGATAAAGTGATGCTGTTGGGACATAGTGACTCTTACACTCAAGACAAGAATATGCAAGTTACTATTGCCTTCAACCATTTTGGTGAGGGCCTTGTTCAACGAATGCCCAGGTAAATCAATCGCTCAAGTCTATCACTAGCAGATATGGTTCTATTTGAGCTTTCTACACCTTTCTAAATAATGCTTCGTTCCTTCCCTTCCCAACCGTAGTATCTTACAATCCACTTCTTTGGAGTGTCCTGACATACCATCCAGTGGCCGGCTCTGATATAATTTGTAACAGCCCAAACTCACAGTTAGCAGACATTTTGGACAGCCACAAATGGTATGAGAGTCAGACACCGGGTGGTGTGAACTCTGGGTCCCGAAGAGAGTGAATGATGGGATCTCACATCTATTGGAAAGGAGAATGAAACATTCTTTGTAAGAGTGTAGAAACCAGTAACGACCCATACCCACCGTTAGCCAATATTGTCTTCTTTAGCTCGTTTTAAAACGTGTCTGCTAGGTTTCCACACAAGGGTGGTCTGTTCTCCTCTCCAACCGACAACACAAAACCTCTTTGAGAGCCATAATTAAAAAGGGAAAATTTTAAAAAGACAATATCGGCCCCGAGGCTGCACAATTCAACTCAACTTTAAAAGCATCAAAATTTTGATGCGGGTATTTTTGTTTCCATCTAAAAATGGTGTCTTTGAATTGTGGGAATGATTTTGCAGATGCAGGCATGGGTATTTCCATGTGGTGAACAACGATTACACCCACTGGGAAATGTACGCAATTGGAGGGAGTGCTTCACCGACTATATACAGTCAAGGCAACAGATTTTTGGCGCCGGACGTCCGATACCGAAAGGAGGTGACAAAGCACGAGGACGCGCCGGAGAGTGAGTGGCGTCACTGGAACTGGCGGTCAGAGGGCGACATGATGTTGAACGGCGCCTATTTTCGCCAGTCCGGCGCCGGCGCTGCGTCCAGCTACGCAAGAGCTTACAGTCTGAGCGCTAGACCCTCCTCCCTCGTTGGTTCTATCACGGTCACAGCCGGCGCCCTCAACTGCCGCAGAGGCTCCCGTTGCTAGTTAGTATTAACAGGAAAGGTCATATAACTGCAAGTACCGAAAATGAAGGAAGAAAAGGCCTTCGTTTATTAAGAGCAGTTGAATTATTATTAGTTTATGAAGATCTTAATTTTTGTGTTGGTTTAATTTCCATCCAACTTTTTGGTTTGCCAAAGCAGAGTATTTGGTTAAACTCGGATGTTTGTGATTGTGAAAGGTAATGGGAAAAGTATGAGGAATTATGTTTTTGAGTCACCAATCACGCTCACAAAAACGGAATGAGTACTATATATTTTACCCCGTCAATCA

mRNA sequence

CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCGATTTGTTCTCCAATGGCGGCTTCCTTTTTCTTTTTGCTTCTCTTACCACTCTCTTTCTTCTTCACTGATTCCTCCTTGGCTTCTGTTCAAGATCCTCATCTTGTCGTTCAAGAAGTTCAAAGGAGCATCAATGAATCGAGGACAAGAAGAAACTTGGGATATTTGTCATGTAGAACAGGAAACCCAATAGACGACTGCTGGAGATGCGACCCCAATTGGGAAACCAACCGAAAGCGCTTAGCCGACTGCGCCATTGGGTTTGGCAAAAACGCCATCGGCGGCAGAAACGGCCGCTTCTACGTCGTCACAGACGCCGGCGACGACGACCCTCTCAACCCCAGACCAGGAACCCTCCGCCACGCCGTCATCCAAAACGAGCCCTTATGGATCATCTTCAAGCGTGACATGGTAATCCAACTCAGACAAGAACTAGTGATGAACTCGTTCAAGACCATCGACGGGCGTGGGGCCAGCGTGCATGTGGCAGGTGGGCCATGCATCACCATCCACTACGCCACAAACATCATAATCCACGGCATCCACATACATGACTGTAAGAGAGGGGGCAATGGTAACATACGGGACTCCCCACAGCACTCCGGGTGGTGGACTATATCGGACGGTGATGGAGTGTCGATCTTTGGTGGCAAGAATATTTGGGTTGACCATTGTTCTTTGTCTAACTGTAATGATGGGTTGATCGACGCGATTCATGGTTCGACGGCGATCACGATTTCGAATAATTACATGACTCATCATGATAAAGTGATGCTGTTGGGACATAGTGACTCTTACACTCAAGACAAGAATATGCAAGTTACTATTGCCTTCAACCATTTTGGTGAGGGCCTTGTTCAACGAATGCCCAGATGCAGGCATGGGTATTTCCATGTGGTGAACAACGATTACACCCACTGGGAAATGTACGCAATTGGAGGGAGTGCTTCACCGACTATATACAGTCAAGGCAACAGATTTTTGGCGCCGGACGTCCGATACCGAAAGGAGGTGACAAAGCACGAGGACGCGCCGGAGAGTGAGTGGCGTCACTGGAACTGGCGGTCAGAGGGCGACATGATGTTGAACGGCGCCTATTTTCGCCAGTCCGGCGCCGGCGCTGCGTCCAGCTACGCAAGAGCTTACAGTCTGAGCGCTAGACCCTCCTCCCTCGTTGGTTCTATCACGGTCACAGCCGGCGCCCTCAACTGCCGCAGAGGCTCCCGTTGCTAGTTAGTATTAACAGGAAAGGTCATATAACTGCAAGTACCGAAAATGAAGGAAGAAAAGGCCTTCGTTTATTAAGAGCAGTTGAATTATTATTAGTTTATGAAGATCTTAATTTTTGTGTTGGTTTAATTTCCATCCAACTTTTTGGTTTGCCAAAGCAGAGTATTTGGTTAAACTCGGATGTTTGTGATTGTGAAAGGTAATGGGAAAAGTATGAGGAATTATGTTTTTGAGTCACCAATCACGCTCACAAAAACGGAATGAGTACTATATATTTTACCCCGTCAATCA

Coding sequence (CDS)

ATGGCGGCTTCCTTTTTCTTTTTGCTTCTCTTACCACTCTCTTTCTTCTTCACTGATTCCTCCTTGGCTTCTGTTCAAGATCCTCATCTTGTCGTTCAAGAAGTTCAAAGGAGCATCAATGAATCGAGGACAAGAAGAAACTTGGGATATTTGTCATGTAGAACAGGAAACCCAATAGACGACTGCTGGAGATGCGACCCCAATTGGGAAACCAACCGAAAGCGCTTAGCCGACTGCGCCATTGGGTTTGGCAAAAACGCCATCGGCGGCAGAAACGGCCGCTTCTACGTCGTCACAGACGCCGGCGACGACGACCCTCTCAACCCCAGACCAGGAACCCTCCGCCACGCCGTCATCCAAAACGAGCCCTTATGGATCATCTTCAAGCGTGACATGGTAATCCAACTCAGACAAGAACTAGTGATGAACTCGTTCAAGACCATCGACGGGCGTGGGGCCAGCGTGCATGTGGCAGGTGGGCCATGCATCACCATCCACTACGCCACAAACATCATAATCCACGGCATCCACATACATGACTGTAAGAGAGGGGGCAATGGTAACATACGGGACTCCCCACAGCACTCCGGGTGGTGGACTATATCGGACGGTGATGGAGTGTCGATCTTTGGTGGCAAGAATATTTGGGTTGACCATTGTTCTTTGTCTAACTGTAATGATGGGTTGATCGACGCGATTCATGGTTCGACGGCGATCACGATTTCGAATAATTACATGACTCATCATGATAAAGTGATGCTGTTGGGACATAGTGACTCTTACACTCAAGACAAGAATATGCAAGTTACTATTGCCTTCAACCATTTTGGTGAGGGCCTTGTTCAACGAATGCCCAGATGCAGGCATGGGTATTTCCATGTGGTGAACAACGATTACACCCACTGGGAAATGTACGCAATTGGAGGGAGTGCTTCACCGACTATATACAGTCAAGGCAACAGATTTTTGGCGCCGGACGTCCGATACCGAAAGGAGGTGACAAAGCACGAGGACGCGCCGGAGAGTGAGTGGCGTCACTGGAACTGGCGGTCAGAGGGCGACATGATGTTGAACGGCGCCTATTTTCGCCAGTCCGGCGCCGGCGCTGCGTCCAGCTACGCAAGAGCTTACAGTCTGAGCGCTAGACCCTCCTCCCTCGTTGGTTCTATCACGGTCACAGCCGGCGCCCTCAACTGCCGCAGAGGCTCCCGTTGCTAG

Homology

[Close]

BLAST of CmoCh04G027910 vs. Swiss-Prot
Match: PLY_ZINVI (Pectate lyase OS=Zinnia violacea PE=1 SV=1)

HSP 1 Score: 689.1 bits (1777), Expect = 2.9e-197
Identity = 324/399 (81.20%), Postives = 358/399 (89.72%), Query Frame = 1


Query: 10  LLPLSFFFTDSSLASV---QDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCWRCD 69
           +LPL  F +  ++AS    + PH +V EV +SIN SR  RNLGYLSC TGNPIDDCWRCD
Sbjct: 5   ILPLILFISSLAIASSSPSRTPHAIVNEVHKSINASR--RNLGYLSCGTGNPIDDCWRCD 64

Query: 70  PNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLWI 129
           PNW  NR+RLADCAIGFGKNA+GGRNGR YVVTD G+DDP+NP PGTLR+AVIQ+EPLWI
Sbjct: 65  PNWANNRQRLADCAIGFGKNAMGGRNGRIYVVTDPGNDDPVNPVPGTLRYAVIQDEPLWI 124

Query: 130 IFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGGN 189
           IFKRDMVIQLRQELVMNS KTIDGRG +VH+  GPCITIHYA+NIIIHGIHIHDCK+ GN
Sbjct: 125 IFKRDMVIQLRQELVMNSHKTIDGRGVNVHIGNGPCITIHYASNIIIHGIHIHDCKQAGN 184

Query: 190 GNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISNNYM 249
           GNIR+SP HSGWWT SDGDG+SIF  K+IW+DH SLSNC+DGLIDAIHGSTAITISNNYM
Sbjct: 185 GNIRNSPHHSGWWTQSDGDGISIFASKDIWIDHNSLSNCHDGLIDAIHGSTAITISNNYM 244

Query: 250 THHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYA 309
           THHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYA
Sbjct: 245 THHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYA 304

Query: 310 IGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQSG 369
           IGGSASPTIYSQGNRFLAP+ R+ KEVTKHE+APESEW++WNWRSEGD+MLNGAYFR+SG
Sbjct: 305 IGGSASPTIYSQGNRFLAPNTRFDKEVTKHENAPESEWKNWNWRSEGDLMLNGAYFRESG 364

Query: 370 AGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
             AASS+ARA SLS RPS+LV S+T +AGAL CR+GSRC
Sbjct: 365 GRAASSFARASSLSGRPSTLVASMTRSAGALVCRKGSRC 401

[Close]

BLAST of CmoCh04G027910 vs. Swiss-Prot
Match: PLY11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=3 SV=2)

HSP 1 Score: 682.2 bits (1759), Expect = 3.5e-195
Identity = 319/404 (78.96%), Postives = 357/404 (88.37%), Query Frame = 1


Query: 2   AASFFFLLLLPLSFFFTDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDD 61
           A +F  LL +  +  F+ S    VQDP+LVV +V RS+  + +RR+L YLSCRTGNPIDD
Sbjct: 10  AYAFLLLLTIGNTLAFSSSLPDHVQDPNLVVDDVNRSVFNA-SRRSLAYLSCRTGNPIDD 69

Query: 62  CWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQN 121
           CWRCDPNWETNR+RLADCAIGFGKNAIGGR GR YVVTD  +DDP+NPRPGTLR+AV Q 
Sbjct: 70  CWRCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQE 129

Query: 122 EPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDC 181
           EPLWIIFKRDMVI+L++EL++ SFKTIDGRG+SVH+  GPC+ IHYATNIIIHGI+IHDC
Sbjct: 130 EPLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDC 189

Query: 182 KRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITI 241
           K G  G I+D P H+GWW  SDGD V+IFGGK++W+DHCSLSNC+DGLIDAIHGSTAITI
Sbjct: 190 KPGSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITI 249

Query: 242 SNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 301
           SNN+MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
Sbjct: 250 SNNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 309

Query: 302 WEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAY 361
           WEMYAIGGSASPTIYSQGNRFLAP+ R+ KEVTKHEDAPES+WR WNWRSEGDM+LNGAY
Sbjct: 310 WEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAY 369

Query: 362 FRQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           FR+SGA A S+YARA SLSARPSSLVGSIT TAG L+CRRG RC
Sbjct: 370 FRESGAEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 412

[Close]

BLAST of CmoCh04G027910 vs. Swiss-Prot
Match: PLY18_SOLLC (Probable pectate lyase P18 OS=Solanum lycopersicum GN=9612 PE=2 SV=1)

HSP 1 Score: 672.2 bits (1733), Expect = 3.6e-192
Identity = 320/404 (79.21%), Postives = 356/404 (88.12%), Query Frame = 1


Query: 4   SFFFLLLLPLSFFFTDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCW 63
           +F  LLL PL        ++S+QDP LVVQ+V RSIN S TRRNLGYLSC +GNPID   
Sbjct: 7   TFSLLLLAPLLV------ISSIQDPELVVQDVHRSINASLTRRNLGYLSCGSGNPIDRLL 66

Query: 64  RCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEP 123
              P         + CAIGFGKNAIGG+NGR YVVTD+G+DDP+NP+PGTLRHAVIQ+EP
Sbjct: 67  AMQPQLGKKSPAFSYCAIGFGKNAIGGKNGRIYVVTDSGNDDPVNPKPGTLRHAVIQDEP 126

Query: 124 LWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKR 183
           LWIIFKRDMVIQL+QELVMNS+KTIDGRGASVH++GGPCITIH+ +NIIIHGI+IHDCK+
Sbjct: 127 LWIIFKRDMVIQLKQELVMNSYKTIDGRGASVHISGGPCITIHHTSNIIIHGINIHDCKQ 186

Query: 184 GGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISN 243
            GNGNIRDSP HSGWW +SDGDG+SIFGGKNIWVDHCSLSNC+DGLIDAIHGSTAITISN
Sbjct: 187 SGNGNIRDSPNHSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITISN 246

Query: 244 NYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 303
           NY THHDKVMLLGHSDS+TQDK MQVT+AFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
Sbjct: 247 NYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 306

Query: 304 MYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFR 363
           MYAIGGSA+PTI SQGNRFLAP+ +YRKEVTKHEDAPES+WR WNWRSEGD+MLNGAYFR
Sbjct: 307 MYAIGGSAAPTINSQGNRFLAPNEKYRKEVTKHEDAPESQWRSWNWRSEGDLMLNGAYFR 366

Query: 364 QSGAGAASS--YARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           Q+GAGA+SS  YARA SLSARPSSLVGSIT  AG +NC++GSRC
Sbjct: 367 QTGAGASSSSTYARASSLSARPSSLVGSITTNAGPVNCKKGSRC 404

[Close]

BLAST of CmoCh04G027910 vs. Swiss-Prot
Match: PLY18_ARATH (Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2)

HSP 1 Score: 661.8 bits (1706), Expect = 4.9e-189
Identity = 309/400 (77.25%), Postives = 353/400 (88.25%), Query Frame = 1


Query: 7   FLLLLPLSFFFTDSSLASVQDPHLVVQEVQRSINESRT-RRNLGYLSCRTGNPIDDCWRC 66
           FLL  PL   F  S    V DP  VV+EV +SIN S   RR LGYLSC TGNPIDDCWRC
Sbjct: 15  FLLYAPL---FLSSP---VPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCWRC 74

Query: 67  DPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLW 126
           DP+WE +R+RLADCAIGFGKNAIGGR+GR YVVTD+G+D+P++P+PGTLRHAV+Q+EPLW
Sbjct: 75  DPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLW 134

Query: 127 IIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGG 186
           IIF+RDM IQL++EL+MNSFKTIDGRGASVH++GGPCITI Y TNIIIHGIHIHDCK+GG
Sbjct: 135 IIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGG 194

Query: 187 NGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISNNY 246
           N  +R SP+H GW TISDGDGVSIFGG ++WVDHCS SNC DGLIDAI GSTAIT+SNN+
Sbjct: 195 NAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNH 254

Query: 247 MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 306
           MTHHDKVMLLGHSD+Y++DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY
Sbjct: 255 MTHHDKVMLLGHSDTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 314

Query: 307 AIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQS 366
           AIGGSA+PTI SQGNRFLAP++R+ KEVTKHEDAPESEW+ WNWRS GD++LNGA+F  S
Sbjct: 315 AIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPS 374

Query: 367 GAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           G  A+SSYA+A SL A+PSSLVG +T T+GALNCR+GSRC
Sbjct: 375 GGAASSSYAKASSLGAKPSSLVGPLTSTSGALNCRKGSRC 408

[Close]

BLAST of CmoCh04G027910 vs. Swiss-Prot
Match: PLY22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 5.5e-188
Identity = 308/402 (76.62%), Postives = 349/402 (86.82%), Query Frame = 1


Query: 6   FFLLLLPLSFFFTDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCWRC 65
           F L+      F   +S   V DP LVV+EV R INES +RR LG+ SC +GNPIDDCWRC
Sbjct: 31  FALIFFCCILFSALASSLPVSDPELVVEEVHRKINESISRRKLGFFSCGSGNPIDDCWRC 90

Query: 66  DPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLW 125
           D +WE NRKRLADC IGFGKNAIGGR+G  YVVTD G+DDP+NPRPGTLR+AVIQ+EPLW
Sbjct: 91  DKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQDEPLW 150

Query: 126 IIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGG 185
           IIFKRDM IQL++EL+MNSFKT+DGRGASVH++GGPCITI Y TNIIIHG+HIHDCK+GG
Sbjct: 151 IIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDCKQGG 210

Query: 186 NGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISNNY 245
           N  +RDSP+H G+ T+SDGDGVSIFGG ++WVDHCSLSNCNDGLIDAI GSTAITISNNY
Sbjct: 211 NTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITISNNY 270

Query: 246 MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 305
           +THH+KVMLLGHSD+Y QDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY
Sbjct: 271 LTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 330

Query: 306 AIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQS 365
           AIGGSA+PTI SQGNRFLAPD    KEVTKHEDAPE EWR+WNWRSEGD++LNGA+F  S
Sbjct: 331 AIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEGDLLLNGAFFTYS 390

Query: 366 GAGAA--SSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           GAG A  SSY++A SL+ARPSS VG IT+ +GAL+C+RGS C
Sbjct: 391 GAGPAKSSSYSKASSLAARPSSHVGEITIASGALSCKRGSHC 432

[Close]

BLAST of CmoCh04G027910 vs. TrEMBL
Match: A0A0A0KNX3_CUCSA (Pectate lyase OS=Cucumis sativus GN=Csa_5G517820 PE=3 SV=1)

HSP 1 Score: 756.1 bits (1951), Expect = 2.1e-215
Identity = 363/409 (88.75%), Postives = 381/409 (93.15%), Query Frame = 1


Query: 5   FFFLLLLPLSFFFT-------DSSLASV-QDPHLVVQEVQRSINESRTRRNLGYLSCRTG 64
           +F LLLL LSFF +       +SSL  V Q PHLVV+EVQRSIN SR  RNLGYLSC TG
Sbjct: 12  YFLLLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGSR--RNLGYLSCGTG 71

Query: 65  NPIDDCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRH 124
           NPIDDCWRCD NWETNRKRLADCAIGFGKNAIGG+NGRFYVVTD+G+DDPLNPRPGTLRH
Sbjct: 72  NPIDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRPGTLRH 131

Query: 125 AVIQNEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGI 184
           AVIQNEPLWIIFKRDMVI+L QELVMNSFKTIDGRGASVH+AGGPCI IHYATNIIIHGI
Sbjct: 132 AVIQNEPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYATNIIIHGI 191

Query: 185 HIHDCKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGS 244
           HIHDCKRGGN NIRDSPQH+GWWT SDGDGVSI GGK IW+DHCSLSNCNDGLIDAIHGS
Sbjct: 192 HIHDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHGS 251

Query: 245 TAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVN 304
           TAITISNNYMTHHDKVMLLGHSDS+TQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVN
Sbjct: 252 TAITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVN 311

Query: 305 NDYTHWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMM 364
           NDYTHWEMYAIGGSASPTIYSQGNRF+AP  R+RKEVTKHEDAPESEWRHWNWRSEGD++
Sbjct: 312 NDYTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDLL 371

Query: 365 LNGAYFRQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           LNGAYFRQSGAGA+SSYARAYSLSARPSSLVG IT+TAGALNCRRGSRC
Sbjct: 372 LNGAYFRQSGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 418

[Close]

BLAST of CmoCh04G027910 vs. TrEMBL
Match: B9GIX5_POPTR (Pectate lyase OS=Populus trichocarpa GN=POPTR_0001s35960g PE=3 SV=1)

HSP 1 Score: 733.4 bits (1892), Expect = 1.5e-208
Identity = 347/402 (86.32%), Postives = 375/402 (93.28%), Query Frame = 1


Query: 9   LLLPLSFFFTDSS-----LASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCW 68
           L + L FFF+  +      +S+QDP LVVQEV RSIN SR  RNLGYLSC TGNPIDDCW
Sbjct: 4   LAILLIFFFSAPAPHFVFSSSIQDPELVVQEVHRSINASR--RNLGYLSCGTGNPIDDCW 63

Query: 69  RCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEP 128
           RCDPNWE NR+RLADCAIGFGKNAIGGRNGR YVVTD+G+DD +NP+PGTLRHAVIQ+EP
Sbjct: 64  RCDPNWERNRQRLADCAIGFGKNAIGGRNGRIYVVTDSGNDDAVNPKPGTLRHAVIQDEP 123

Query: 129 LWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKR 188
           LWIIFKRDMVIQLRQELVMNS+KTIDGRGASVH+AGGPCITIHYATNIIIHGIHIHDCK+
Sbjct: 124 LWIIFKRDMVIQLRQELVMNSYKTIDGRGASVHIAGGPCITIHYATNIIIHGIHIHDCKQ 183

Query: 189 GGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISN 248
           GGNG+IRDSP+HSGWWT SDGDGVSIF  K+IWVDHCSLSNC+DGLIDAIHGSTAITISN
Sbjct: 184 GGNGDIRDSPRHSGWWTPSDGDGVSIFASKHIWVDHCSLSNCHDGLIDAIHGSTAITISN 243

Query: 249 NYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 308
           N+MTHHDKVMLLGHSDSYTQDK+MQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
Sbjct: 244 NFMTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 303

Query: 309 MYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFR 368
           MYAIGGSASPTI SQGNRFLAP+ R+ KEVTKHEDAPESEWRHWNWRSEGD+MLNGAYFR
Sbjct: 304 MYAIGGSASPTINSQGNRFLAPNRRFNKEVTKHEDAPESEWRHWNWRSEGDLMLNGAYFR 363

Query: 369 QSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           QSGAGA+SSYARAYSLSARPSSLVGS+T+T+G LNCR+GSRC
Sbjct: 364 QSGAGASSSYARAYSLSARPSSLVGSMTLTSGVLNCRKGSRC 403

[Close]

BLAST of CmoCh04G027910 vs. TrEMBL
Match: M5WSK8_PRUPE (Pectate lyase OS=Prunus persica GN=PRUPE_ppa006569mg PE=3 SV=1)

HSP 1 Score: 732.3 bits (1889), Expect = 3.3e-208
Identity = 350/407 (86.00%), Postives = 374/407 (91.89%), Query Frame = 1


Query: 1   MAASFFFLLLLPLSFFFTDSSLASVQ--DPHLVVQEVQRSINESRTRRNLGYLSCRTGNP 60
           MA     L+ L ++ F T +  +S Q  DP LV QEV RSIN SR  RNLGYLSC TGNP
Sbjct: 1   MAGLSLLLIFLIITCFLTATFASSSQLHDPELVAQEVHRSINASR--RNLGYLSCGTGNP 60

Query: 61  IDDCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAV 120
           IDDCWRCDPNWE NR+RLADCAIGFGK+AIGGRNGR YVVTD+GDDDP+NPRPGTLRHAV
Sbjct: 61  IDDCWRCDPNWEQNRQRLADCAIGFGKDAIGGRNGRIYVVTDSGDDDPVNPRPGTLRHAV 120

Query: 121 IQNEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHI 180
           IQ+EPLWIIFKRDMV+QL+QELVMNSFKTIDGRGASVH+AGGPCITIHYATNIIIHGI+I
Sbjct: 121 IQDEPLWIIFKRDMVVQLKQELVMNSFKTIDGRGASVHIAGGPCITIHYATNIIIHGINI 180

Query: 181 HDCKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTA 240
           HDCK+ GNGNIRDSPQHSGWWTISDGDGVSIFGGK+IWVDHCSLSNC+DGLIDAIHGSTA
Sbjct: 181 HDCKQAGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCHDGLIDAIHGSTA 240

Query: 241 ITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 300
           ITISNNYMTHHDKVMLLGHSDSYTQDK MQVT+AFNHFGEGLVQRMPRCRHGYFHVVNND
Sbjct: 241 ITISNNYMTHHDKVMLLGHSDSYTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNND 300

Query: 301 YTHWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLN 360
           YTHWEMYAIGGSA+PTI SQGNRFLAP+ R+ KEVTKHEDAPESEWR WNWRSEGD+MLN
Sbjct: 301 YTHWEMYAIGGSAAPTINSQGNRFLAPNTRFNKEVTKHEDAPESEWRGWNWRSEGDLMLN 360

Query: 361 GAYFRQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           GAYFRQSGAGA+SSYARA SLSARPSSLVGSIT TAGAL CR+GSRC
Sbjct: 361 GAYFRQSGAGASSSYARASSLSARPSSLVGSITTTAGALICRKGSRC 405

[Close]

BLAST of CmoCh04G027910 vs. TrEMBL
Match: K4BDF4_SOLLC (Pectate lyase OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 714.5 bits (1843), Expect = 7.1e-203
Identity = 334/404 (82.67%), Postives = 371/404 (91.83%), Query Frame = 1


Query: 4   SFFFLLLLPLSFFFTDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCW 63
           +F  LLL PL        ++S+QDP LVVQ+V RSIN S TRRNLGYLSC +GNPIDDCW
Sbjct: 7   TFSLLLLAPLLV------ISSIQDPELVVQDVHRSINASLTRRNLGYLSCGSGNPIDDCW 66

Query: 64  RCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEP 123
           RC+PNWE NR+RLADCAIGFGKNAIGG+NGR YVVTD+G+DDP+NP+PGTLRHAVIQ+EP
Sbjct: 67  RCNPNWEKNRQRLADCAIGFGKNAIGGKNGRIYVVTDSGNDDPVNPKPGTLRHAVIQDEP 126

Query: 124 LWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKR 183
           LWIIFKRDMVIQL+QELVMNS+KTIDGRGASVH++GGPCITIH+ +NIIIHGI+IHDCK+
Sbjct: 127 LWIIFKRDMVIQLKQELVMNSYKTIDGRGASVHISGGPCITIHHTSNIIIHGINIHDCKQ 186

Query: 184 GGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISN 243
            GNGNIRDSP HSGWW +SDGDG+SIFGGKNIWVDHCSLSNC+DGLIDAIHGSTAITISN
Sbjct: 187 SGNGNIRDSPNHSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITISN 246

Query: 244 NYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 303
           NY THHDKVMLLGHSDS+TQDK MQVT+AFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
Sbjct: 247 NYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 306

Query: 304 MYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFR 363
           MYAIGGSA+PTI SQGNRFLAP+ +YRKEVTKHEDAPES+WR WNWRSEGD+MLNGAYFR
Sbjct: 307 MYAIGGSAAPTINSQGNRFLAPNEKYRKEVTKHEDAPESQWRSWNWRSEGDLMLNGAYFR 366

Query: 364 QSGAGAASS--YARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           Q+GAGA+SS  YARA SLSARPSSLVGSIT  AG +NC++GSRC
Sbjct: 367 QTGAGASSSSTYARASSLSARPSSLVGSITTNAGPVNCKKGSRC 404

[Close]

BLAST of CmoCh04G027910 vs. TrEMBL
Match: M1AYA6_SOLTU (Pectate lyase OS=Solanum tuberosum GN=PGSC0003DMG400012640 PE=3 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 3.5e-202
Identity = 333/403 (82.63%), Postives = 370/403 (91.81%), Query Frame = 1


Query: 4   SFFFLLLLPLSFFFTDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCW 63
           +F  LLL PL        ++S+QDP LVVQ+V RSIN S TRRNLGYLSC +GNPIDDCW
Sbjct: 7   TFSLLLLAPLLV------ISSIQDPELVVQDVHRSINASLTRRNLGYLSCGSGNPIDDCW 66

Query: 64  RCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEP 123
           RC+PNWE NR+RLADCAIGFGKNAIGG+NGR YVVTD+G+DDP+NP+PGTLRHAVIQ+EP
Sbjct: 67  RCNPNWEKNRQRLADCAIGFGKNAIGGKNGRIYVVTDSGNDDPVNPKPGTLRHAVIQDEP 126

Query: 124 LWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKR 183
           LWIIFKRDMVIQL+QELVMNS+KTIDGRGASVH++GGPCITIH+ +NIIIHGI+IHDCK+
Sbjct: 127 LWIIFKRDMVIQLKQELVMNSYKTIDGRGASVHISGGPCITIHHTSNIIIHGINIHDCKQ 186

Query: 184 GGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISN 243
            GNGNIRDSP HSGWW +SDGDG+SIFGGKNIWVDHCSLSNC+DGLIDAIHGSTAITISN
Sbjct: 187 SGNGNIRDSPNHSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITISN 246

Query: 244 NYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 303
           NY THHDKVMLLGHSDS+TQD+ MQVT+AFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
Sbjct: 247 NYFTHHDKVMLLGHSDSFTQDQGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 306

Query: 304 MYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFR 363
           MYAIGGSA+PTI SQGNRFLAP  +YRKEVTKHEDAPES+WR WNWRSEGD+MLNGAYFR
Sbjct: 307 MYAIGGSAAPTINSQGNRFLAPYEKYRKEVTKHEDAPESQWRSWNWRSEGDLMLNGAYFR 366

Query: 364 QSGAGAASS-YARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           Q+GAGA+SS YARA SLSARPSSLVGSIT  AG +NC++GSRC
Sbjct: 367 QTGAGASSSTYARASSLSARPSSLVGSITTNAGPINCKKGSRC 403

[Close]

BLAST of CmoCh04G027910 vs. TAIR10
Match: AT3G27400.1 (AT3G27400.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 682.2 bits (1759), Expect = 2.0e-196
Identity = 319/404 (78.96%), Postives = 357/404 (88.37%), Query Frame = 1


Query: 2   AASFFFLLLLPLSFFFTDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDD 61
           A +F  LL +  +  F+ S    VQDP+LVV +V RS+  + +RR+L YLSCRTGNPIDD
Sbjct: 10  AYAFLLLLTIGNTLAFSSSLPDHVQDPNLVVDDVNRSVFNA-SRRSLAYLSCRTGNPIDD 69

Query: 62  CWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQN 121
           CWRCDPNWETNR+RLADCAIGFGKNAIGGR GR YVVTD  +DDP+NPRPGTLR+AV Q 
Sbjct: 70  CWRCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQE 129

Query: 122 EPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDC 181
           EPLWIIFKRDMVI+L++EL++ SFKTIDGRG+SVH+  GPC+ IHYATNIIIHGI+IHDC
Sbjct: 130 EPLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDC 189

Query: 182 KRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITI 241
           K G  G I+D P H+GWW  SDGD V+IFGGK++W+DHCSLSNC+DGLIDAIHGSTAITI
Sbjct: 190 KPGSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITI 249

Query: 242 SNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 301
           SNN+MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
Sbjct: 250 SNNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 309

Query: 302 WEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAY 361
           WEMYAIGGSASPTIYSQGNRFLAP+ R+ KEVTKHEDAPES+WR WNWRSEGDM+LNGAY
Sbjct: 310 WEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAY 369

Query: 362 FRQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           FR+SGA A S+YARA SLSARPSSLVGSIT TAG L+CRRG RC
Sbjct: 370 FRESGAEAPSTYARASSLSARPSSLVGSITTTAGTLSCRRGRRC 412

[Close]

BLAST of CmoCh04G027910 vs. TAIR10
Match: AT4G24780.1 (AT4G24780.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 661.8 bits (1706), Expect = 2.8e-190
Identity = 309/400 (77.25%), Postives = 353/400 (88.25%), Query Frame = 1


Query: 7   FLLLLPLSFFFTDSSLASVQDPHLVVQEVQRSINESRT-RRNLGYLSCRTGNPIDDCWRC 66
           FLL  PL   F  S    V DP  VV+EV +SIN S   RR LGYLSC TGNPIDDCWRC
Sbjct: 15  FLLYAPL---FLSSP---VPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCWRC 74

Query: 67  DPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLW 126
           DP+WE +R+RLADCAIGFGKNAIGGR+GR YVVTD+G+D+P++P+PGTLRHAV+Q+EPLW
Sbjct: 75  DPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLW 134

Query: 127 IIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGG 186
           IIF+RDM IQL++EL+MNSFKTIDGRGASVH++GGPCITI Y TNIIIHGIHIHDCK+GG
Sbjct: 135 IIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGG 194

Query: 187 NGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISNNY 246
           N  +R SP+H GW TISDGDGVSIFGG ++WVDHCS SNC DGLIDAI GSTAIT+SNN+
Sbjct: 195 NAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNH 254

Query: 247 MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 306
           MTHHDKVMLLGHSD+Y++DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY
Sbjct: 255 MTHHDKVMLLGHSDTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 314

Query: 307 AIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQS 366
           AIGGSA+PTI SQGNRFLAP++R+ KEVTKHEDAPESEW+ WNWRS GD++LNGA+F  S
Sbjct: 315 AIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPS 374

Query: 367 GAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           G  A+SSYA+A SL A+PSSLVG +T T+GALNCR+GSRC
Sbjct: 375 GGAASSSYAKASSLGAKPSSLVGPLTSTSGALNCRKGSRC 408

[Close]

BLAST of CmoCh04G027910 vs. TAIR10
Match: AT5G63180.1 (AT5G63180.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 658.3 bits (1697), Expect = 3.1e-189
Identity = 308/402 (76.62%), Postives = 349/402 (86.82%), Query Frame = 1


Query: 6   FFLLLLPLSFFFTDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCWRC 65
           F L+      F   +S   V DP LVV+EV R INES +RR LG+ SC +GNPIDDCWRC
Sbjct: 31  FALIFFCCILFSALASSLPVSDPELVVEEVHRKINESISRRKLGFFSCGSGNPIDDCWRC 90

Query: 66  DPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLW 125
           D +WE NRKRLADC IGFGKNAIGGR+G  YVVTD G+DDP+NPRPGTLR+AVIQ+EPLW
Sbjct: 91  DKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQDEPLW 150

Query: 126 IIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGG 185
           IIFKRDM IQL++EL+MNSFKT+DGRGASVH++GGPCITI Y TNIIIHG+HIHDCK+GG
Sbjct: 151 IIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDCKQGG 210

Query: 186 NGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISNNY 245
           N  +RDSP+H G+ T+SDGDGVSIFGG ++WVDHCSLSNCNDGLIDAI GSTAITISNNY
Sbjct: 211 NTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITISNNY 270

Query: 246 MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 305
           +THH+KVMLLGHSD+Y QDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY
Sbjct: 271 LTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 330

Query: 306 AIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQS 365
           AIGGSA+PTI SQGNRFLAPD    KEVTKHEDAPE EWR+WNWRSEGD++LNGA+F  S
Sbjct: 331 AIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEGDLLLNGAFFTYS 390

Query: 366 GAGAA--SSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           GAG A  SSY++A SL+ARPSS VG IT+ +GAL+C+RGS C
Sbjct: 391 GAGPAKSSSYSKASSLAARPSSHVGEITIASGALSCKRGSHC 432

[Close]

BLAST of CmoCh04G027910 vs. TAIR10
Match: AT1G67750.1 (AT1G67750.1 Pectate lyase family protein)

HSP 1 Score: 643.3 bits (1658), Expect = 1.0e-184
Identity = 308/405 (76.05%), Postives = 347/405 (85.68%), Query Frame = 1


Query: 1   MAASFFFLLLLPLSFFFTDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPID 60
           ++ S F  LLL LS  F  S+   V +P LVVQEV   IN SR  RNLG LSC TGNPID
Sbjct: 8   LSLSLFSCLLLVLSPTFIAST--PVSEPELVVQEVNEKINASR--RNLGVLSCGTGNPID 67

Query: 61  DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQ 120
           DCWRCDP WE NR+RLADCAIGFGK+AIGGR+G+ YVVTD+ D D +NP+PGTLRHAVIQ
Sbjct: 68  DCWRCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQ 127

Query: 121 NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD 180
           +EPLWIIF RDMVI+L++EL+MNSFKTIDGRGASVH+AGG CIT+ Y TNIIIHG++IHD
Sbjct: 128 DEPLWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHD 187

Query: 181 CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAIT 240
           CKR GN  +RDSP H GW T SDGD VSIFGG ++WVDHCSLSNC DGLIDAIHGSTAIT
Sbjct: 188 CKRKGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAIT 247

Query: 241 ISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT 300
           ISNNY++HH+KVMLLGHSDSYT+DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
Sbjct: 248 ISNNYLSHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT 307

Query: 301 HWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGA 360
           HW+MYAIGGSA+PTI SQGNRFLAP+    KEVTK+EDAP S+W+ WNWRSEGD+ LNGA
Sbjct: 308 HWQMYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLFLNGA 367

Query: 361 YFRQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           +F  SG GA+SSYA+A SLSARPSSLV S+T  AGAL CR+GSRC
Sbjct: 368 FFTPSGGGASSSYAKASSLSARPSSLVASVTSNAGALFCRKGSRC 408

[Close]

BLAST of CmoCh04G027910 vs. TAIR10
Match: AT5G48900.1 (AT5G48900.1 Pectin lyase-like superfamily protein)

HSP 1 Score: 598.6 bits (1542), Expect = 2.9e-171
Identity = 283/408 (69.36%), Postives = 331/408 (81.13%), Query Frame = 1


Query: 7   FLLLLPLSFFFT--DSSLAS-------VQDPHLVVQEVQRSINESRTRRNLGYLSCRTGN 66
           F   L LS FFT  DS+ ++       V++P  V   V  SI  S  RR LGY SC TGN
Sbjct: 10  FASALLLSMFFTGVDSTRSNETWHEHAVENPEEVAAMVDMSIRNSTARRRLGYFSCSTGN 69

Query: 67  PIDDCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHA 126
           PIDDCWRCD  W++ RK LA+CAIGFG+NAIGGR+GR+YVV+D  DD+P+NP+PGTLRHA
Sbjct: 70  PIDDCWRCDRRWQSRRKHLANCAIGFGRNAIGGRDGRYYVVSDPNDDNPVNPKPGTLRHA 129

Query: 127 VIQNEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIH 186
           VIQ EPLWI+FKRDMVI L++EL+MNSFKTIDGRG +VH+A G CITI + TNIIIHGIH
Sbjct: 130 VIQEEPLWIVFKRDMVITLKEELIMNSFKTIDGRGVNVHIANGACITIQFVTNIIIHGIH 189

Query: 187 IHDCKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGST 246
           IHDC+  GN  +R SP H GW T++DGDG+SIFG  +IW+DH SLSNC DGLIDA+  ST
Sbjct: 190 IHDCRPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSNCADGLIDAVMAST 249

Query: 247 AITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNN 306
           AITISNNY THH++VMLLGHSD+YT+DK MQVTIA+NHFGEGL+QRMPRCRHGYFHVVNN
Sbjct: 250 AITISNNYFTHHNEVMLLGHSDTYTRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNN 309

Query: 307 DYTHWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMML 366
           DYTHWEMYAIGGSASPTI SQGNR+LAP  R+ KEVTK + A + +WRHWNWRSEGD+ L
Sbjct: 310 DYTHWEMYAIGGSASPTINSQGNRYLAPRNRFAKEVTKRDYAGQWQWRHWNWRSEGDLFL 369

Query: 367 NGAYFRQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           NGA+F +SG+G  +SYARA SL+A+ SSLVG IT  AGALNCR G RC
Sbjct: 370 NGAFFTRSGSGLGASYARASSLAAKSSSLVGVITYNAGALNCRGGRRC 417

[Close]

BLAST of CmoCh04G027910 vs. NCBI nr
Match: gi|449450042|ref|XP_004142773.1| (PREDICTED: pectate lyase-like [Cucumis sativus])

HSP 1 Score: 756.1 bits (1951), Expect = 3.1e-215
Identity = 363/409 (88.75%), Postives = 381/409 (93.15%), Query Frame = 1


Query: 5   FFFLLLLPLSFFFT-------DSSLASV-QDPHLVVQEVQRSINESRTRRNLGYLSCRTG 64
           +F LLLL LSFF +       +SSL  V Q PHLVV+EVQRSIN SR  RNLGYLSC TG
Sbjct: 12  YFLLLLLSLSFFLSMTAPLPSNSSLPFVHQHPHLVVEEVQRSINGSR--RNLGYLSCGTG 71

Query: 65  NPIDDCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRH 124
           NPIDDCWRCD NWETNRKRLADCAIGFGKNAIGG+NGRFYVVTD+G+DDPLNPRPGTLRH
Sbjct: 72  NPIDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRPGTLRH 131

Query: 125 AVIQNEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGI 184
           AVIQNEPLWIIFKRDMVI+L QELVMNSFKTIDGRGASVH+AGGPCI IHYATNIIIHGI
Sbjct: 132 AVIQNEPLWIIFKRDMVIKLAQELVMNSFKTIDGRGASVHLAGGPCIKIHYATNIIIHGI 191

Query: 185 HIHDCKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGS 244
           HIHDCKRGGN NIRDSPQH+GWWT SDGDGVSI GGK IW+DHCSLSNCNDGLIDAIHGS
Sbjct: 192 HIHDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHGS 251

Query: 245 TAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVN 304
           TAITISNNYMTHHDKVMLLGHSDS+TQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVN
Sbjct: 252 TAITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVN 311

Query: 305 NDYTHWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMM 364
           NDYTHWEMYAIGGSASPTIYSQGNRF+AP  R+RKEVTKHEDAPESEWRHWNWRSEGD++
Sbjct: 312 NDYTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDLL 371

Query: 365 LNGAYFRQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           LNGAYFRQSGAGA+SSYARAYSLSARPSSLVG IT+TAGALNCRRGSRC
Sbjct: 372 LNGAYFRQSGAGASSSYARAYSLSARPSSLVGDITITAGALNCRRGSRC 418

[Close]

BLAST of CmoCh04G027910 vs. NCBI nr
Match: gi|659117905|ref|XP_008458848.1| (PREDICTED: pectate lyase-like [Cucumis melo])

HSP 1 Score: 751.1 bits (1938), Expect = 9.9e-214
Identity = 367/419 (87.59%), Postives = 380/419 (90.69%), Query Frame = 1


Query: 1   MAAS-----FFFLLLLPLSFFFT--------DSSLASV-QDPHLVVQEVQRSINESRTRR 60
           MAAS     +F  LLL L FF +        +SSL  V Q PHL V+EVQRSIN SR  R
Sbjct: 1   MAASSSSSLYFLFLLLSLCFFLSMSTAPIPSNSSLPFVHQHPHLAVEEVQRSINGSR--R 60

Query: 61  NLGYLSCRTGNPIDDCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDP 120
           NLGYLSC TGNPIDDCWRCD NWETNRKRLADCAIGFGKNAIGG+NGRFYVVTDA DDDP
Sbjct: 61  NLGYLSCGTGNPIDDCWRCDSNWETNRKRLADCAIGFGKNAIGGKNGRFYVVTDARDDDP 120

Query: 121 LNPRPGTLRHAVIQNEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIH 180
           LNPRPGTLRHAVIQNEPLWIIFKRDMVIQL QELVMNSFKTIDGRGASVHVAGGPCI IH
Sbjct: 121 LNPRPGTLRHAVIQNEPLWIIFKRDMVIQLEQELVMNSFKTIDGRGASVHVAGGPCIKIH 180

Query: 181 YATNIIIHGIHIHDCKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCN 240
           YATNIIIHGIHIHDCKRGGN NIRDSPQH+GWWT SDGDGVSI GGK IW+DHCSLSNCN
Sbjct: 181 YATNIIIHGIHIHDCKRGGNANIRDSPQHAGWWTASDGDGVSILGGKQIWIDHCSLSNCN 240

Query: 241 DGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPR 300
           DGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDS+TQDKNMQVTIAFNHFGEGLVQRMPR
Sbjct: 241 DGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSFTQDKNMQVTIAFNHFGEGLVQRMPR 300

Query: 301 CRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRH 360
           CRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRF+AP  R+RKEVTKHEDAPESEWR+
Sbjct: 301 CRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFVAPYNRFRKEVTKHEDAPESEWRY 360

Query: 361 WNWRSEGDMMLNGAYFRQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           WNWRSEGDM+LNGAYFRQSGAGA SSYARAYSLSARPSSLVG IT+TAGALNCRRGSRC
Sbjct: 361 WNWRSEGDMLLNGAYFRQSGAGARSSYARAYSLSARPSSLVGDITLTAGALNCRRGSRC 417

[Close]

BLAST of CmoCh04G027910 vs. NCBI nr
Match: gi|224060175|ref|XP_002300069.1| (pectate lyase family protein [Populus trichocarpa])

HSP 1 Score: 733.4 bits (1892), Expect = 2.1e-208
Identity = 347/402 (86.32%), Postives = 375/402 (93.28%), Query Frame = 1


Query: 9   LLLPLSFFFTDSS-----LASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCW 68
           L + L FFF+  +      +S+QDP LVVQEV RSIN SR  RNLGYLSC TGNPIDDCW
Sbjct: 4   LAILLIFFFSAPAPHFVFSSSIQDPELVVQEVHRSINASR--RNLGYLSCGTGNPIDDCW 63

Query: 69  RCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEP 128
           RCDPNWE NR+RLADCAIGFGKNAIGGRNGR YVVTD+G+DD +NP+PGTLRHAVIQ+EP
Sbjct: 64  RCDPNWERNRQRLADCAIGFGKNAIGGRNGRIYVVTDSGNDDAVNPKPGTLRHAVIQDEP 123

Query: 129 LWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKR 188
           LWIIFKRDMVIQLRQELVMNS+KTIDGRGASVH+AGGPCITIHYATNIIIHGIHIHDCK+
Sbjct: 124 LWIIFKRDMVIQLRQELVMNSYKTIDGRGASVHIAGGPCITIHYATNIIIHGIHIHDCKQ 183

Query: 189 GGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISN 248
           GGNG+IRDSP+HSGWWT SDGDGVSIF  K+IWVDHCSLSNC+DGLIDAIHGSTAITISN
Sbjct: 184 GGNGDIRDSPRHSGWWTPSDGDGVSIFASKHIWVDHCSLSNCHDGLIDAIHGSTAITISN 243

Query: 249 NYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 308
           N+MTHHDKVMLLGHSDSYTQDK+MQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
Sbjct: 244 NFMTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 303

Query: 309 MYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFR 368
           MYAIGGSASPTI SQGNRFLAP+ R+ KEVTKHEDAPESEWRHWNWRSEGD+MLNGAYFR
Sbjct: 304 MYAIGGSASPTINSQGNRFLAPNRRFNKEVTKHEDAPESEWRHWNWRSEGDLMLNGAYFR 363

Query: 369 QSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           QSGAGA+SSYARAYSLSARPSSLVGS+T+T+G LNCR+GSRC
Sbjct: 364 QSGAGASSSYARAYSLSARPSSLVGSMTLTSGVLNCRKGSRC 403

[Close]

BLAST of CmoCh04G027910 vs. NCBI nr
Match: gi|595934944|ref|XP_007215475.1| (hypothetical protein PRUPE_ppa006569mg [Prunus persica])

HSP 1 Score: 732.3 bits (1889), Expect = 4.7e-208
Identity = 350/407 (86.00%), Postives = 374/407 (91.89%), Query Frame = 1


Query: 1   MAASFFFLLLLPLSFFFTDSSLASVQ--DPHLVVQEVQRSINESRTRRNLGYLSCRTGNP 60
           MA     L+ L ++ F T +  +S Q  DP LV QEV RSIN SR  RNLGYLSC TGNP
Sbjct: 1   MAGLSLLLIFLIITCFLTATFASSSQLHDPELVAQEVHRSINASR--RNLGYLSCGTGNP 60

Query: 61  IDDCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAV 120
           IDDCWRCDPNWE NR+RLADCAIGFGK+AIGGRNGR YVVTD+GDDDP+NPRPGTLRHAV
Sbjct: 61  IDDCWRCDPNWEQNRQRLADCAIGFGKDAIGGRNGRIYVVTDSGDDDPVNPRPGTLRHAV 120

Query: 121 IQNEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHI 180
           IQ+EPLWIIFKRDMV+QL+QELVMNSFKTIDGRGASVH+AGGPCITIHYATNIIIHGI+I
Sbjct: 121 IQDEPLWIIFKRDMVVQLKQELVMNSFKTIDGRGASVHIAGGPCITIHYATNIIIHGINI 180

Query: 181 HDCKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTA 240
           HDCK+ GNGNIRDSPQHSGWWTISDGDGVSIFGGK+IWVDHCSLSNC+DGLIDAIHGSTA
Sbjct: 181 HDCKQAGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCHDGLIDAIHGSTA 240

Query: 241 ITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 300
           ITISNNYMTHHDKVMLLGHSDSYTQDK MQVT+AFNHFGEGLVQRMPRCRHGYFHVVNND
Sbjct: 241 ITISNNYMTHHDKVMLLGHSDSYTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNND 300

Query: 301 YTHWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLN 360
           YTHWEMYAIGGSA+PTI SQGNRFLAP+ R+ KEVTKHEDAPESEWR WNWRSEGD+MLN
Sbjct: 301 YTHWEMYAIGGSAAPTINSQGNRFLAPNTRFNKEVTKHEDAPESEWRGWNWRSEGDLMLN 360

Query: 361 GAYFRQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           GAYFRQSGAGA+SSYARA SLSARPSSLVGSIT TAGAL CR+GSRC
Sbjct: 361 GAYFRQSGAGASSSYARASSLSARPSSLVGSITTTAGALICRKGSRC 405

[Close]

BLAST of CmoCh04G027910 vs. NCBI nr
Match: gi|645248851|ref|XP_008230481.1| (PREDICTED: pectate lyase-like [Prunus mume])

HSP 1 Score: 729.9 bits (1883), Expect = 2.4e-207
Identity = 347/407 (85.26%), Postives = 375/407 (92.14%), Query Frame = 1


Query: 1   MAASFFFLLLLPLSFFFTDSSLASVQ--DPHLVVQEVQRSINESRTRRNLGYLSCRTGNP 60
           MA     L+ L ++ F T + ++S Q  DP LV QEV RSIN SR  RNLGYLSC TGNP
Sbjct: 1   MAGFSLLLIFLIITCFLTATFVSSSQLHDPELVAQEVHRSINASR--RNLGYLSCGTGNP 60

Query: 61  IDDCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAV 120
           IDDCWRCDPNWE NR+RLADCAIGFGK+AIGG+NGR YVV+D+GDDDP+NPRPGTLRHAV
Sbjct: 61  IDDCWRCDPNWEQNRERLADCAIGFGKDAIGGKNGRIYVVSDSGDDDPVNPRPGTLRHAV 120

Query: 121 IQNEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHI 180
           IQ+EPLWIIFKRDMV+QL+QELVMNSFKTIDGRGASVH+AGGPCITIHYATNIIIHGIHI
Sbjct: 121 IQDEPLWIIFKRDMVVQLKQELVMNSFKTIDGRGASVHIAGGPCITIHYATNIIIHGIHI 180

Query: 181 HDCKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTA 240
           HDCK+ GNGNIR+SP+HSGWWTISDGDGVSIFGGK+IWVDHCSLSNC+DGLIDAIHGSTA
Sbjct: 181 HDCKQAGNGNIRNSPEHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCHDGLIDAIHGSTA 240

Query: 241 ITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNND 300
           ITISNNYMTHHDKVMLLGHSDSYTQDK MQVT+AFNHFGEGLVQRMPRCRHGYFHVVNND
Sbjct: 241 ITISNNYMTHHDKVMLLGHSDSYTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNND 300

Query: 301 YTHWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLN 360
           YTHWEMYAIGGSA+PTI S+GNRFLAP+ R+ KEVTKHEDAPESEWR WNWRSEGDMMLN
Sbjct: 301 YTHWEMYAIGGSAAPTINSEGNRFLAPNTRFNKEVTKHEDAPESEWRGWNWRSEGDMMLN 360

Query: 361 GAYFRQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           GAYFRQSGAGA+SSYARA SLSARPSSLVGSIT TAGAL CR+GSRC
Sbjct: 361 GAYFRQSGAGASSSYARASSLSARPSSLVGSITTTAGALICRKGSRC 405

The following BLAST results are available for this feature:

BLAST of CmoCh04G027910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PLY_ZINVI	2.9e-197	81.20	Pectate lyase OS=Zinnia violacea PE=1 SV=1	[more]
PLY11_ARATH	3.5e-195	78.96	Putative pectate lyase 11 OS=Arabidopsis thaliana GN=At3g27400 PE=3 SV=2	[more]
PLY18_SOLLC	3.6e-192	79.21	Probable pectate lyase P18 OS=Solanum lycopersicum GN=9612 PE=2 SV=1	[more]
PLY18_ARATH	4.9e-189	77.25	Probable pectate lyase 18 OS=Arabidopsis thaliana GN=At4g24780 PE=2 SV=2	[more]
PLY22_ARATH	5.5e-188	76.62	Probable pectate lyase 22 OS=Arabidopsis thaliana GN=At5g63180 PE=2 SV=1	[more]

BLAST of CmoCh04G027910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KNX3_CUCSA	2.1e-215	88.75	Pectate lyase OS=Cucumis sativus GN=Csa_5G517820 PE=3 SV=1	[more]
B9GIX5_POPTR	1.5e-208	86.32	Pectate lyase OS=Populus trichocarpa GN=POPTR_0001s35960g PE=3 SV=1	[more]
M5WSK8_PRUPE	3.3e-208	86.00	Pectate lyase OS=Prunus persica GN=PRUPE_ppa006569mg PE=3 SV=1	[more]
K4BDF4_SOLLC	7.1e-203	82.67	Pectate lyase OS=Solanum lycopersicum PE=3 SV=1	[more]
M1AYA6_SOLTU	3.5e-202	82.63	Pectate lyase OS=Solanum tuberosum GN=PGSC0003DMG400012640 PE=3 SV=1	[more]

BLAST of CmoCh04G027910 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G27400.1	2.0e-196	78.96	Pectin lyase-like superfamily protein	[more]
AT4G24780.1	2.8e-190	77.25	Pectin lyase-like superfamily protein	[more]
AT5G63180.1	3.1e-189	76.62	Pectin lyase-like superfamily protein	[more]
AT1G67750.1	1.0e-184	76.05	Pectate lyase family protein	[more]
AT5G48900.1	2.9e-171	69.36	Pectin lyase-like superfamily protein	[more]

BLAST of CmoCh04G027910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449450042\|ref\|XP_004142773.1\|	3.1e-215	88.75	PREDICTED: pectate lyase-like [Cucumis sativus]	[more]
gi\|659117905\|ref\|XP_008458848.1\|	9.9e-214	87.59	PREDICTED: pectate lyase-like [Cucumis melo]	[more]
gi\|224060175\|ref\|XP_002300069.1\|	2.1e-208	86.32	pectate lyase family protein [Populus trichocarpa]	[more]
gi\|595934944\|ref\|XP_007215475.1\|	4.7e-208	86.00	hypothetical protein PRUPE_ppa006569mg [Prunus persica]	[more]
gi\|645248851\|ref\|XP_008230481.1\|	2.4e-207	85.26	PREDICTED: pectate lyase-like [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002022	Pec_lyase
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold
IPR018082	AmbAllergen

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045490	pectin catabolic process
biological_process	GO:0009624	response to nematode
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0030570	pectate lyase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G027910.1	CmoCh04G027910.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002022	Pectate lyase/Amb allergen	PFAM	PF00544	Pec_lyase_C	coord: 137..322 score: 1.2
IPR002022	Pectate lyase/Amb allergen	SMART	SM00656	amb_all	coord: 131..328 score: 1.2E
IPR011050	Pectin lyase fold/virulence factor	unknown	SSF51126	Pectin lyase-like	coord: 32..400 score: 4.56E
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 57..397 score: 2.5E
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 79..96 score: 3.6E-85coord: 103..128 score: 3.6E-85coord: 305..324 score: 3.6E-85coord: 347..371 score: 3.6E-85coord: 203..224 score: 3.6E-85coord: 376..399 score: 3.6E-85coord: 139..155 score: 3.6E-85coord: 283..302 score: 3.6
None	No IPR available	PANTHER	PTHR31683	FAMILY NOT NAMED	coord: 1..405 score:
None	No IPR available	PANTHER	PTHR31683:SF29	PECTATE LYASE 11-RELATED	coord: 1..405 score:

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G027910	Cucsa.011030	Cucumber (Gy14) v1	cgycmoB0544
CmoCh04G027910	CmaCh04G026640	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G027910	Cla004642	Watermelon (97103) v1	cmowmB646
CmoCh04G027910	Csa5G517820	Cucumber (Chinese Long) v2	cmocuB716
CmoCh04G027910	MELO3C021607	Melon (DHL92) v3.5.1	cmomeB624
CmoCh04G027910	ClCG09G019510	Watermelon (Charleston Gray)	cmowcgB608
CmoCh04G027910	CSPI05G17960	Wild cucumber (PI 183967)	cmocpiB724
CmoCh04G027910	Lsi02G016140	Bottle gourd (USVL1VR-Ls)	cmolsiB640
CmoCh04G027910	Cp4.1LG01g23700	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G027910	MELO3C021607.2	Melon (DHL92) v3.6.1	cmomedB713
CmoCh04G027910	CsaV3_5G026870	Cucumber (Chinese Long) v3	cmocucB0848
CmoCh04G027910	Cla97C09G180950	Watermelon (97103) v2	cmowmbB772
CmoCh04G027910	Bhi06G000499	Wax gourd	cmowgoB0836
CmoCh04G027910	CsGy5G017640	Cucumber (Gy14) v2	cgybcmoB626
CmoCh04G027910	Carg04480	Silver-seed gourd	carcmoB0940

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh04G027910	Cucurbita moschata (Rifu)	cmocmoB261
CmoCh04G027910	Cucurbita maxima (Rimu)	cmacmoB308
CmoCh04G027910	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G027910	Cucurbita pepo (Zucchini)	cmocpeB701
CmoCh04G027910	Melon (DHL92) v3.6.1	cmomedB730
CmoCh04G027910	Silver-seed gourd	carcmoB0370
CmoCh04G027910	Cucumber (Chinese Long) v3	cmocucB0869