Carg04480 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg04480
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Pectate lyase
Location	Cucurbita_argyrosperma_scaffold_032 : 630007 .. 632803 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGGCTTCCTTTTTCTTTTTGCTTCTTTTACCACTCTCTTTCTTCTTCATTGATTCCTCCTTGGCTTCTGTTCAAGATCCTCATCTTGTCGTTCAAGAAGTTCAAAGGTATACATTTTTTGTTTTTGTTTTTCGTTTCTTGTTTATGGTTCAGTTTTGTGGAAGATTTGGACCCTTTTAACAAAATGTGGTTTCTTCTAACATGTTTTTAGTGTTTCAACTACAAAAGTTTCATATAAACATGTATGTGAATCTTCCTTTCTTACTCATTATTATCTCATTTCAACATTAGAATCCATTATTCACTTTCAACATTGATACATTCCTTAATTATCAAATTCATTGTTAGTAGATATGGTCCGTTTTGACCCGTCACTTATTATCGTTAGACTCACGATTTTAAAACGTGTTTGCTAGGAAGAGATTTCCATACCCTTATAAGAAATGTTTCGTTCCCCTTTCTAACCAATGTGGGATTAGAGCTAAACACCGAGTGGTGTGCCAGCGAGCAACCCTTGTAAGAAATGTTTCGTTCCCTTTTTTAACCAATGTGGGATCAGAGCTAAACACCGAGCAGTGTGCCAGCAAGGACGTTGACCCCTCGAAGGGGTGGATTGTGAGATCCCCACATCGGTAGGAGAGGAGAACGAAACATTTCTCATAAGGGTATGAAAACATCTCCCTAACAAACACGTTTTAAAATCGTAAGACTGACTTGAACCAAATTGGACAACAACGAATTAGTAAGTATATTTCATACCTACAACTTTAAGAGATTGTTCTTTTTAGACTTTCTCTTTCGAGGTTTACACGTCTTTATAAATGGTGATTTGTTCTCTTCTCGAACAAATGTGGGACATCACAAGTACACTCATAATGTTCTCTTTAATCATGTGTCTTATTTTTAAATTGTCAGGAGCATCAATGAATCGAGGACAAGAAGAAACTTGGGATATTTGTCATGTAGAACAGGAAACCCAATAGACGACTGCTGGAGATGCGACCCCAATTGGGAAACCAACCGAAAGCGCTTAGCCGACTGCGCCATTGGGTTCGGCAAAAACGCCATCGGCGGCAGAAACGGCCGCTTCTACGTCGTCACAGACGCCGGCGACGACGACCCTCTCAACCCCAGACCAGGAACCCTCCGCCACGCCGTCATCCAAAACGAGCCCTTATGGATCATCTTCAAGCGTGACATGGTAATCCAACTCAGACAAGAACTAGTGATGAACTCGTTCAAGACCATCGACGGGCGTGGGGCCAGCGTGCATGTGGCAGGTGGGCCATGCATCACCATCCACTACGCCACAAACATCATAATCCACGGCATCCACATACATGACTGTAAGAGAGGGGGCAATGGTAACATACGGGACTCCCCACAGCACTCCGGGTGGTGGACTATATCGGACGGTGATGGAGTGTCGATCTTTGGTGGCAAGAATATTTGGGTTGACCATTGTTCTTTGTCTAACTGTAACGATGGGTTGATCGACGCGATTCATGGTTCGACGGCGATCACGATTTCGAATAATTACATGACTCATCATGATAAAGTGATGCTGTTGGGACATAGTGACTCTTACACTCAAGACAAGAATATGCAAGTTACTATTGCCTTCAACCATTTTGGTGAGGGCCTTGTTCAACGAATGCCCAGGTAAATCAACTGCTCAAGTCTATCACTAGCAGATATGGTTCTATTTGAGCTTTCTACACCTTTCTAAATAATGCTTCGTTCCTTCCCTTCCCAACCGTAGTATCTTACAATCCGGAGTCTCCTGACATACCATCCAGGCTCTGATATAATTTGTAACAGCCCAAACTCACAGTTAGCAGACATTTTGGACAGCCACAAGTGGTGTGAGAGTCAGACACCGGGTGGTGTGAACTCTGGGTCCCGAAGAGAGTGAATGATGGGATCTCACATCTATTGGAAAGGAGAATGAAACATTCTTTGTAAGAGTGTAGAAACCAGTAACGACCCATACCCACCGTTAGCCAATATTGTCTTCTTTAGCTCGTTTTAAAACGTGTCTGCTAGGTTTCCACACAAGGGTGGTCTGTTCTCCTCTCCAACAGACTGTTAGGAATCACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCGTGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATACCAATGGAGATAGTATTCCTCACTTATAAACCCATGATCTTCCACTAAATTAACCAATGTGGGACACTCCCAATCCCAATAATCCTCAACACAGACAACACAAAACCTCTTTGAGAGCCATAATTAAAAAGGGAAAATTTAAAAAAGACAATATCAATTCAACTCAACTTTAAAAGCATCAAAATTTTGATGAGGGTATTTTTGTTTCCATCTAAAAATGGTGTCTTTGAATTGTGGGAATGATTTTGCAGATGCAGGCATGGGTATTTCCATGTGGTGAACAACGATTACACCCACTGGGAAATGTACGCAATTGGAGGGAGTGCTTCACCGACTATATACAGTCAAGGCAACAGATTTTTGGCGCCGGACGTCCGATACCGAAAGGAGGTGACAAAGCACGAGGACGCGCCGGAGAGTGAGTGGCGTCACTGGAACTGGCGGTCAGAGGGCGACATGATGTTGAACGGCGCCTATTTTCGCCAGTCCGGCGCCGGCGCTGCGTCCAGCTACGCAAGAGCTTACAGTCTGAGCGCTAGACCCTCCTCCCTCGTTGGTTCTATCACGGTCACAGCCGGCGCCCTCAACTGCCGCAGAGGCTCCCGTTGCTAG

mRNA sequence

ATGCCGGCTTCCTTTTTCTTTTTGCTTCTTTTACCACTCTCTTTCTTCTTCATTGATTCCTCCTTGGCTTCTGTTCAAGATCCTCATCTTGTCGTTCAAGAAGTTCAAAGGAGCATCAATGAATCGAGGACAAGAAGAAACTTGGGATATTTGTCATGTAGAACAGGAAACCCAATAGACGACTGCTGGAGATGCGACCCCAATTGGGAAACCAACCGAAAGCGCTTAGCCGACTGCGCCATTGGGTTCGGCAAAAACGCCATCGGCGGCAGAAACGGCCGCTTCTACGTCGTCACAGACGCCGGCGACGACGACCCTCTCAACCCCAGACCAGGAACCCTCCGCCACGCCGTCATCCAAAACGAGCCCTTATGGATCATCTTCAAGCGTGACATGGTAATCCAACTCAGACAAGAACTAGTGATGAACTCGTTCAAGACCATCGACGGGCGTGGGGCCAGCGTGCATGTGGCAGGTGGGCCATGCATCACCATCCACTACGCCACAAACATCATAATCCACGGCATCCACATACATGACTGTAAGAGAGGGGGCAATGGTAACATACGGGACTCCCCACAGCACTCCGGGTGGTGGACTATATCGGACGGTGATGGAGTGTCGATCTTTGGTGGCAAGAATATTTGGGTTGACCATTGTTCTTTGTCTAACTGTAACGATGGGTTGATCGACGCGATTCATGGTTCGACGGCGATCACGATTTCGAATAATTACATGACTCATCATGATAAAGTGATGCTGTTGGGACATAGTGACTCTTACACTCAAGACAAGAATATGCAAGTTACTATTGCCTTCAACCATTTTGGTGAGGGCCTTGTTCAACGAATGCCCAGATGCAGGCATGGGTATTTCCATGTGGTGAACAACGATTACACCCACTGGGAAATGTACGCAATTGGAGGGAGTGCTTCACCGACTATATACAGTCAAGGCAACAGATTTTTGGCGCCGGACGTCCGATACCGAAAGGAGGTGACAAAGCACGAGGACGCGCCGGAGAGTGAGTGGCGTCACTGGAACTGGCGGTCAGAGGGCGACATGATGTTGAACGGCGCCTATTTTCGCCAGTCCGGCGCCGGCGCTGCGTCCAGCTACGCAAGAGCTTACAGTCTGAGCGCTAGACCCTCCTCCCTCGTTGGTTCTATCACGGTCACAGCCGGCGCCCTCAACTGCCGCAGAGGCTCCCGTTGCTAG

Coding sequence (CDS)

ATGCCGGCTTCCTTTTTCTTTTTGCTTCTTTTACCACTCTCTTTCTTCTTCATTGATTCCTCCTTGGCTTCTGTTCAAGATCCTCATCTTGTCGTTCAAGAAGTTCAAAGGAGCATCAATGAATCGAGGACAAGAAGAAACTTGGGATATTTGTCATGTAGAACAGGAAACCCAATAGACGACTGCTGGAGATGCGACCCCAATTGGGAAACCAACCGAAAGCGCTTAGCCGACTGCGCCATTGGGTTCGGCAAAAACGCCATCGGCGGCAGAAACGGCCGCTTCTACGTCGTCACAGACGCCGGCGACGACGACCCTCTCAACCCCAGACCAGGAACCCTCCGCCACGCCGTCATCCAAAACGAGCCCTTATGGATCATCTTCAAGCGTGACATGGTAATCCAACTCAGACAAGAACTAGTGATGAACTCGTTCAAGACCATCGACGGGCGTGGGGCCAGCGTGCATGTGGCAGGTGGGCCATGCATCACCATCCACTACGCCACAAACATCATAATCCACGGCATCCACATACATGACTGTAAGAGAGGGGGCAATGGTAACATACGGGACTCCCCACAGCACTCCGGGTGGTGGACTATATCGGACGGTGATGGAGTGTCGATCTTTGGTGGCAAGAATATTTGGGTTGACCATTGTTCTTTGTCTAACTGTAACGATGGGTTGATCGACGCGATTCATGGTTCGACGGCGATCACGATTTCGAATAATTACATGACTCATCATGATAAAGTGATGCTGTTGGGACATAGTGACTCTTACACTCAAGACAAGAATATGCAAGTTACTATTGCCTTCAACCATTTTGGTGAGGGCCTTGTTCAACGAATGCCCAGATGCAGGCATGGGTATTTCCATGTGGTGAACAACGATTACACCCACTGGGAAATGTACGCAATTGGAGGGAGTGCTTCACCGACTATATACAGTCAAGGCAACAGATTTTTGGCGCCGGACGTCCGATACCGAAAGGAGGTGACAAAGCACGAGGACGCGCCGGAGAGTGAGTGGCGTCACTGGAACTGGCGGTCAGAGGGCGACATGATGTTGAACGGCGCCTATTTTCGCCAGTCCGGCGCCGGCGCTGCGTCCAGCTACGCAAGAGCTTACAGTCTGAGCGCTAGACCCTCCTCCCTCGTTGGTTCTATCACGGTCACAGCCGGCGCCCTCAACTGCCGCAGAGGCTCCCGTTGCTAG

Protein sequence

MPASFFFLLLLPLSFFFIDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC

Homology

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BLAST of Carg04480 vs. NCBI nr
Match: XP_023526071.1 (pectate lyase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 841.6 bits (2173), Expect = 1.1e-240
Identity = 401/405 (99.01%), Postives = 402/405 (99.26%), Query Frame = 0


Query: 1   MPASFFFLLLLPLSFFFIDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPID 60
           M ASFFFLLLLPLSFFF DSSLA VQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPID
Sbjct: 1   MAASFFFLLLLPLSFFFTDSSLAEVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPID 60

Query: 61  DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQ 120
           DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQ
Sbjct: 61  DCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQ 120

Query: 121 NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD 180
           NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD
Sbjct: 121 NEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHD 180

Query: 181 CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAIT 240
           CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGK+IWVDHCSLSNCNDGLIDAIHGSTAIT
Sbjct: 181 CKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAIHGSTAIT 240

Query: 241 ISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT 300
           ISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT
Sbjct: 241 ISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYT 300

Query: 301 HWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGA 360
           HWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGA
Sbjct: 301 HWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGA 360

Query: 361 YFRQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           YFRQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC
Sbjct: 361 YFRQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 405

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BLAST of Carg04480 vs. NCBI nr
Match: XP_022959813.1 (pectate lyase-like [Cucurbita moschata])

HSP 1 Score: 815.5 bits (2105), Expect = 8.3e-233
Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 0


Query: 21  SLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCWRCDPNWETNRKRLADCA 80
           SLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCWRCDPNWETNRKRLADCA
Sbjct: 73  SLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCWRCDPNWETNRKRLADCA 132

Query: 81  IGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLWIIFKRDMVIQLRQEL 140
           IGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLWIIFKRDMVIQLRQEL
Sbjct: 133 IGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLWIIFKRDMVIQLRQEL 192

Query: 141 VMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGGNGNIRDSPQHSGWWT 200
           VMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGGNGNIRDSPQHSGWWT
Sbjct: 193 VMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGGNGNIRDSPQHSGWWT 252

Query: 201 ISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDS 260
           ISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDS
Sbjct: 253 ISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDS 312

Query: 261 YTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGN 320
           YTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGN
Sbjct: 313 YTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGN 372

Query: 321 RFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQSGAGAASSYARAYSLS 380
           RFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQSGAGAASSYARAYSLS
Sbjct: 373 RFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQSGAGAASSYARAYSLS 432

Query: 381 ARPSSLVGSITVTAGALNCRRGSRC 406
           ARPSSLVGSITVTAGALNCRRGSRC
Sbjct: 433 ARPSSLVGSITVTAGALNCRRGSRC 457

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BLAST of Carg04480 vs. NCBI nr
Match: XP_022991156.1 (pectate lyase-like, partial [Cucurbita maxima])

HSP 1 Score: 809.3 bits (2089), Expect = 5.9e-231
Identity = 381/385 (98.96%), Postives = 384/385 (99.74%), Query Frame = 0


Query: 21  SLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCWRCDPNWETNRKRLADCA 80
           SLASVQDPHLVVQ+VQRSINESR RRNLGYLSCRTGNPIDDCWRCDPNWETNRKRLADCA
Sbjct: 39  SLASVQDPHLVVQQVQRSINESRIRRNLGYLSCRTGNPIDDCWRCDPNWETNRKRLADCA 98

Query: 81  IGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLWIIFKRDMVIQLRQEL 140
           IGFGKNAIGGRNGRFY+VTDAGDDDPLNPRPGTLRHAVIQNEPLWIIFKRDMVIQLRQEL
Sbjct: 99  IGFGKNAIGGRNGRFYMVTDAGDDDPLNPRPGTLRHAVIQNEPLWIIFKRDMVIQLRQEL 158

Query: 141 VMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGGNGNIRDSPQHSGWWT 200
           VMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGGNGNIRDSPQHSGWWT
Sbjct: 159 VMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGGNGNIRDSPQHSGWWT 218

Query: 201 ISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDS 260
           ISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDS
Sbjct: 219 ISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGHSDS 278

Query: 261 YTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGN 320
           YTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGN
Sbjct: 279 YTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYSQGN 338

Query: 321 RFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQSGAGAASSYARAYSLS 380
           RFLAPDVRY+KEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQSGAGAASSYARAYSLS
Sbjct: 339 RFLAPDVRYQKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQSGAGAASSYARAYSLS 398

Query: 381 ARPSSLVGSITVTAGALNCRRGSRC 406
           ARPSSLVGSITVTAGALNCRRGSRC
Sbjct: 399 ARPSSLVGSITVTAGALNCRRGSRC 423

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BLAST of Carg04480 vs. NCBI nr
Match: XP_022134052.1 (pectate lyase-like [Momordica charantia])

HSP 1 Score: 764.6 bits (1973), Expect = 1.7e-217
Identity = 365/412 (88.59%), Postives = 386/412 (93.69%), Query Frame = 0


Query: 1   MPASFFFLLLLPLSFFFIDSSLA-------SVQDPHLVVQEVQRSINESRTRRNLGYLSC 60
           M AS  FLLL+ LS     ++ A       SVQDPH VVQEV+RSIN S  RRNLGY SC
Sbjct: 1   MAASLCFLLLISLSLLLWSAAPASASSLPNSVQDPHRVVQEVERSINVS--RRNLGYFSC 60

Query: 61  RTGNPIDDCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGT 120
            TGNPIDDCWRCDPNWE+NRKRLADCAIGFGKNA+GGRNGRFYVV+DAGDDD +NPRPGT
Sbjct: 61  GTGNPIDDCWRCDPNWESNRKRLADCAIGFGKNAMGGRNGRFYVVSDAGDDDAVNPRPGT 120

Query: 121 LRHAVIQNEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIII 180
           LRHAVIQNEPLWIIFKRDMVI+L+QELVMNS+KTIDGRGASVHVAGGPCITIHYA+NIII
Sbjct: 121 LRHAVIQNEPLWIIFKRDMVIRLKQELVMNSYKTIDGRGASVHVAGGPCITIHYASNIII 180

Query: 181 HGIHIHDCKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAI 240
           HGIHIHDCKRGGNGNIRDSPQHSGWWT+SDGDGVSIFGGK+IWVDHCSLSNCNDGLIDAI
Sbjct: 181 HGIHIHDCKRGGNGNIRDSPQHSGWWTVSDGDGVSIFGGKHIWVDHCSLSNCNDGLIDAI 240

Query: 241 HGSTAITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFH 300
           HGSTAITISNNYMTHHDKVMLLGHSDSYTQDK+MQVTIAFNHFGEGLVQRMPRCRHGYFH
Sbjct: 241 HGSTAITISNNYMTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFH 300

Query: 301 VVNNDYTHWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEG 360
           VVNNDYTHWEMYAIGGSASPTIYSQGNRF APD R+RKEVTKHEDAPE++WRHWNWRSEG
Sbjct: 301 VVNNDYTHWEMYAIGGSASPTIYSQGNRFAAPDNRFRKEVTKHEDAPETQWRHWNWRSEG 360

Query: 361 DMMLNGAYFRQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           D++LNGAYFRQSGAGAASSYARAYSLSARPSSLVGSIT+TAGALNCRRGSRC
Sbjct: 361 DLLLNGAYFRQSGAGAASSYARAYSLSARPSSLVGSITLTAGALNCRRGSRC 410

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BLAST of Carg04480 vs. NCBI nr
Match: XP_004142773.1 (PREDICTED: pectate lyase-like [Cucumis sativus] >KGN51335.1 hypothetical protein Csa_5G517820 [Cucumis sativus])

HSP 1 Score: 750.0 bits (1935), Expect = 4.3e-213
Identity = 354/388 (91.24%), Postives = 370/388 (95.36%), Query Frame = 0


Query: 19  DSSLASV-QDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCWRCDPNWETNRKRLA 78
           +SSL  V Q PHLVV+EVQRSIN S  RRNLGYLSC TGNPIDDCWRCD NWETNRKRLA
Sbjct: 33  NSSLPFVHQHPHLVVEEVQRSINGS--RRNLGYLSCGTGNPIDDCWRCDSNWETNRKRLA 92

Query: 79  DCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLWIIFKRDMVIQLR 138
           DCAIGFGKNAIGG+NGRFYVVTD+G+DDPLNPRPGTLRHAVIQNEPLWIIFKRDMVI+L 
Sbjct: 93  DCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRPGTLRHAVIQNEPLWIIFKRDMVIKLA 152

Query: 139 QELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGGNGNIRDSPQHSG 198
           QELVMNSFKTIDGRGASVH+AGGPCI IHYATNIIIHGIHIHDCKRGGN NIRDSPQH+G
Sbjct: 153 QELVMNSFKTIDGRGASVHLAGGPCIKIHYATNIIIHGIHIHDCKRGGNANIRDSPQHAG 212

Query: 199 WWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGH 258
           WWT SDGDGVSI GGK IW+DHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGH
Sbjct: 213 WWTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGH 272

Query: 259 SDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYS 318
           SDS+TQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYS
Sbjct: 273 SDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYS 332

Query: 319 QGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQSGAGAASSYARAY 378
           QGNRF+AP  R+RKEVTKHEDAPESEWRHWNWRSEGD++LNGAYFRQSGAGA+SSYARAY
Sbjct: 333 QGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDLLLNGAYFRQSGAGASSSYARAY 392

Query: 379 SLSARPSSLVGSITVTAGALNCRRGSRC 406
           SLSARPSSLVG IT+TAGALNCRRGSRC
Sbjct: 393 SLSARPSSLVGDITITAGALNCRRGSRC 418

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BLAST of Carg04480 vs. TAIR10
Match: AT5G63180.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 658.3 bits (1697), Expect = 3.1e-189
Identity = 310/404 (76.73%), Postives = 352/404 (87.13%), Query Frame = 0


Query: 4   SFFFLLLLPLSFFFIDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCW 63
           SF  +    + F  + SSL  V DP LVV+EV R INES +RR LG+ SC +GNPIDDCW
Sbjct: 30  SFALIFFCCILFSALASSL-PVSDPELVVEEVHRKINESISRRKLGFFSCGSGNPIDDCW 89

Query: 64  RCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEP 123
           RCD +WE NRKRLADC IGFGKNAIGGR+G  YVVTD G+DDP+NPRPGTLR+AVIQ+EP
Sbjct: 90  RCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQDEP 149

Query: 124 LWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKR 183
           LWIIFKRDM IQL++EL+MNSFKT+DGRGASVH++GGPCITI Y TNIIIHG+HIHDCK+
Sbjct: 150 LWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDCKQ 209

Query: 184 GGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISN 243
           GGN  +RDSP+H G+ T+SDGDGVSIFGG ++WVDHCSLSNCNDGLIDAI GSTAITISN
Sbjct: 210 GGNTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITISN 269

Query: 244 NYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 303
           NY+THH+KVMLLGHSD+Y QDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
Sbjct: 270 NYLTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 329

Query: 304 MYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFR 363
           MYAIGGSA+PTI SQGNRFLAPD    KEVTKHEDAPE EWR+WNWRSEGD++LNGA+F 
Sbjct: 330 MYAIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEGDLLLNGAFFT 389

Query: 364 QSGAGAA--SSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
            SGAG A  SSY++A SL+ARPSS VG IT+ +GAL+C+RGS C
Sbjct: 390 YSGAGPAKSSSYSKASSLAARPSSHVGEITIASGALSCKRGSHC 432

[Close]

BLAST of Carg04480 vs. TAIR10
Match: AT3G27400.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 631.3 bits (1627), Expect = 4.0e-181
Identity = 298/404 (73.76%), Postives = 335/404 (82.92%), Query Frame = 0


Query: 4   SFFFLLLLPL--SFFFIDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDD 63
           ++ FLLLL +  +  F  S    VQDP+LVV +V RS+  + +RR+L YLSCRTGNPIDD
Sbjct: 10  AYAFLLLLTIGNTLAFSSSLPDHVQDPNLVVDDVNRSVFNA-SRRSLAYLSCRTGNPIDD 69

Query: 64  CWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQN 123
           CWRCDPNWETNR+RLADCAIGFGKNAIGGR GR YVVTD  +DDP+NPRPGTLR+AV Q 
Sbjct: 70  CWRCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQE 129

Query: 124 EPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDC 183
           EPLWIIFKRDMVI+L++EL++ SFKTIDGRG+SVH+  GPC+ IHYATNIIIHGI+IHDC
Sbjct: 130 EPLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDC 189

Query: 184 KRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITI 243
           K G  G I+D P H+GWW  SDGD V+IFGGK++W+DHCSLSNC+DGLIDAIHGSTAITI
Sbjct: 190 KPGSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITI 249

Query: 244 SNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 303
           SNN+MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
Sbjct: 250 SNNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 309

Query: 304 WEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAY 363
           WEMYAIGGSASPTIYSQGNRFLAP+ R+ KEVTKHEDAPES+WR WNWRSEGDM+LNGAY
Sbjct: 310 WEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAY 369

Query: 364 FRQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           FR+SGA A S                          +CRRG RC
Sbjct: 370 FRESGAEAPSXXXXXXXXXXXXXXXXXXXXXXXXXXSCRRGRRC 412

[Close]

BLAST of Carg04480 vs. TAIR10
Match: AT1G67750.1 (Pectate lyase family protein)

HSP 1 Score: 629.8 bits (1623), Expect = 1.2e-180
Identity = 302/402 (75.12%), Postives = 339/402 (84.33%), Query Frame = 0


Query: 4   SFFFLLLLPLSFFFIDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCW 63
           S F  LLL LS  FI S+   V +P LVVQEV   IN S  RRNLG LSC TGNPIDDCW
Sbjct: 11  SLFSCLLLVLSPTFIAST--PVSEPELVVQEVNEKINAS--RRNLGVLSCGTGNPIDDCW 70

Query: 64  RCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEP 123
           RCDP WE NR+RLADCAIGFGK+AIGGR+G+ YVVTD+ D D +NP+PGTLRHAVIQ+EP
Sbjct: 71  RCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQDEP 130

Query: 124 LWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKR 183
           LWIIF RDMVI+L++EL+MNSFKTIDGRGASVH+AGG CIT+ Y TNIIIHG++IHDCKR
Sbjct: 131 LWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHDCKR 190

Query: 184 GGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISN 243
            GN  +RDSP H GW T SDGD VSIFGG ++WVDHCSLSNC DGLIDAIHGSTAITISN
Sbjct: 191 KGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAITISN 250

Query: 244 NYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 303
           NY++HH+KVMLLGHSDSYT+DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW+
Sbjct: 251 NYLSHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWQ 310

Query: 304 MYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFR 363
           MYAIGGSA+PTI SQGNRFLAP+    KEVTK+EDAP S+W+ WNWRSEGD+ LNGA+F 
Sbjct: 311 MYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLFLNGAFFT 370

Query: 364 QSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
            SG GA+SSYA+A        SLV S+T  AGAL CR+GSRC
Sbjct: 371 PSGGGASSSYAKAXXXXXXXXSLVASVTSNAGALFCRKGSRC 408

[Close]

BLAST of Carg04480 vs. TAIR10
Match: AT4G24780.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 616.7 bits (1589), Expect = 1.0e-176
Identity = 290/400 (72.50%), Postives = 331/400 (82.75%), Query Frame = 0


Query: 7   FLLLLPLSFFFIDSSLASVQDPHLVVQEVQRSINES-RTRRNLGYLSCRTGNPIDDCWRC 66
           FLL  PL   F+ S    V DP  VV+EV +SIN S   RR LGYLSC TGNPIDDCWRC
Sbjct: 15  FLLYAPL---FLSS---PVPDPESVVEEVHKSINASVAGRRKLGYLSCTTGNPIDDCWRC 74

Query: 67  DPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLW 126
           DP+WE +R+RLADCAIGFGKNAIGGR+GR YVVTD+G+D+P++P+PGTLRHAV+Q+EPLW
Sbjct: 75  DPHWEQHRQRLADCAIGFGKNAIGGRDGRIYVVTDSGNDNPVSPKPGTLRHAVVQDEPLW 134

Query: 127 IIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGG 186
           IIF+RDM IQL++EL+MNSFKTIDGRGASVH++GGPCITI Y TNIIIHGIHIHDCK+GG
Sbjct: 135 IIFQRDMTIQLKEELIMNSFKTIDGRGASVHISGGPCITIQYVTNIIIHGIHIHDCKQGG 194

Query: 187 NGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISNNY 246
           N  +R SP+H GW TISDGDGVSIFGG ++WVDHCS SNC DGLIDAI GSTAIT+SNN+
Sbjct: 195 NAMVRSSPRHFGWRTISDGDGVSIFGGSHVWVDHCSFSNCEDGLIDAIMGSTAITLSNNH 254

Query: 247 MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 306
           MTHHDKVMLLGHSD+Y++DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY
Sbjct: 255 MTHHDKVMLLGHSDTYSRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMY 314

Query: 307 AIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQS 366
           AIGGSA+PTI SQGNRFLAP++R+ KEVTKHEDAPESEW+ WNWRS GD++LNGA+F  S
Sbjct: 315 AIGGSANPTINSQGNRFLAPNIRFSKEVTKHEDAPESEWKRWNWRSSGDLLLNGAFFTPS 374

Query: 367 GAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           G  A+S                           CR+GSRC
Sbjct: 375 GGAASSXXXXXXXXXXXXXXXXXXXXXXXXXXXCRKGSRC 408

[Close]

BLAST of Carg04480 vs. TAIR10
Match: AT5G48900.1 (Pectin lyase-like superfamily protein)

HSP 1 Score: 597.4 bits (1539), Expect = 6.4e-171
Identity = 281/408 (68.87%), Postives = 331/408 (81.13%), Query Frame = 0


Query: 5   FFFLLLLPLSFFFIDSSLA-------SVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGN 64
           F   LLL + F  +DS+ +       +V++P  V   V  SI  S  RR LGY SC TGN
Sbjct: 10  FASALLLSMFFTGVDSTRSNETWHEHAVENPEEVAAMVDMSIRNSTARRRLGYFSCSTGN 69

Query: 65  PIDDCWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHA 124
           PIDDCWRCD  W++ RK LA+CAIGFG+NAIGGR+GR+YVV+D  DD+P+NP+PGTLRHA
Sbjct: 70  PIDDCWRCDRRWQSRRKHLANCAIGFGRNAIGGRDGRYYVVSDPNDDNPVNPKPGTLRHA 129

Query: 125 VIQNEPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIH 184
           VIQ EPLWI+FKRDMVI L++EL+MNSFKTIDGRG +VH+A G CITI + TNIIIHGIH
Sbjct: 130 VIQEEPLWIVFKRDMVITLKEELIMNSFKTIDGRGVNVHIANGACITIQFVTNIIIHGIH 189

Query: 185 IHDCKRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGST 244
           IHDC+  GN  +R SP H GW T++DGDG+SIFG  +IW+DH SLSNC DGLIDA+  ST
Sbjct: 190 IHDCRPTGNAMVRSSPSHYGWRTMADGDGISIFGSSHIWIDHNSLSNCADGLIDAVMAST 249

Query: 245 AITISNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNN 304
           AITISNNY THH++VMLLGHSD+YT+DK MQVTIA+NHFGEGL+QRMPRCRHGYFHVVNN
Sbjct: 250 AITISNNYFTHHNEVMLLGHSDTYTRDKVMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNN 309

Query: 305 DYTHWEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMML 364
           DYTHWEMYAIGGSASPTI SQGNR+LAP  R+ KEVTK + A + +WRHWNWRSEGD+ L
Sbjct: 310 DYTHWEMYAIGGSASPTINSQGNRYLAPRNRFAKEVTKRDYAGQWQWRHWNWRSEGDLFL 369

Query: 365 NGAYFRQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           NGA+F +SG+G  +SYARA SL+A+ SSLVG IT  AGALNCR G RC
Sbjct: 370 NGAFFTRSGSGLGASYARASSLAAKSSSLVGVITYNAGALNCRGGRRC 417

[Close]

BLAST of Carg04480 vs. Swiss-Prot
Match: sp|O24554|PLY_ZINVI (Pectate lyase OS=Zinnia violacea OX=34245 PE=1 SV=1)

HSP 1 Score: 687.6 bits (1773), Expect = 8.5e-197
Identity = 324/399 (81.20%), Postives = 357/399 (89.47%), Query Frame = 0


Query: 10  LLPLSFFFIDSSLAS---VQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCWRCD 69
           +LPL  F    ++AS    + PH +V EV +SIN S  RRNLGYLSC TGNPIDDCWRCD
Sbjct: 5   ILPLILFISSLAIASSSPSRTPHAIVNEVHKSINAS--RRNLGYLSCGTGNPIDDCWRCD 64

Query: 70  PNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLWI 129
           PNW  NR+RLADCAIGFGKNA+GGRNGR YVVTD G+DDP+NP PGTLR+AVIQ+EPLWI
Sbjct: 65  PNWANNRQRLADCAIGFGKNAMGGRNGRIYVVTDPGNDDPVNPVPGTLRYAVIQDEPLWI 124

Query: 130 IFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGGN 189
           IFKRDMVIQLRQELVMNS KTIDGRG +VH+  GPCITIHYA+NIIIHGIHIHDCK+ GN
Sbjct: 125 IFKRDMVIQLRQELVMNSHKTIDGRGVNVHIGNGPCITIHYASNIIIHGIHIHDCKQAGN 184

Query: 190 GNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISNNYM 249
           GNIR+SP HSGWWT SDGDG+SIF  K+IW+DH SLSNC+DGLIDAIHGSTAITISNNYM
Sbjct: 185 GNIRNSPHHSGWWTQSDGDGISIFASKDIWIDHNSLSNCHDGLIDAIHGSTAITISNNYM 244

Query: 250 THHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYA 309
           THHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYA
Sbjct: 245 THHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYA 304

Query: 310 IGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQSG 369
           IGGSASPTIYSQGNRFLAP+ R+ KEVTKHE+APESEW++WNWRSEGD+MLNGAYFR+SG
Sbjct: 305 IGGSASPTIYSQGNRFLAPNTRFDKEVTKHENAPESEWKNWNWRSEGDLMLNGAYFRESG 364

Query: 370 AGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
             AASS+ARA SLS RPS+LV S+T +AGAL CR+GSRC
Sbjct: 365 GRAASSFARASSLSGRPSTLVASMTRSAGALVCRKGSRC 401

[Close]

BLAST of Carg04480 vs. Swiss-Prot
Match: sp|Q93Z25|PLY22_ARATH (Probable pectate lyase 22 OS=Arabidopsis thaliana OX=3702 GN=At5g63180 PE=2 SV=1)

HSP 1 Score: 658.3 bits (1697), Expect = 5.5e-188
Identity = 310/404 (76.73%), Postives = 352/404 (87.13%), Query Frame = 0


Query: 4   SFFFLLLLPLSFFFIDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCW 63
           SF  +    + F  + SSL  V DP LVV+EV R INES +RR LG+ SC +GNPIDDCW
Sbjct: 30  SFALIFFCCILFSALASSL-PVSDPELVVEEVHRKINESISRRKLGFFSCGSGNPIDDCW 89

Query: 64  RCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEP 123
           RCD +WE NRKRLADC IGFGKNAIGGR+G  YVVTD G+DDP+NPRPGTLR+AVIQ+EP
Sbjct: 90  RCDKDWEKNRKRLADCGIGFGKNAIGGRDGEIYVVTDPGNDDPVNPRPGTLRYAVIQDEP 149

Query: 124 LWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKR 183
           LWIIFKRDM IQL++EL+MNSFKT+DGRGASVH++GGPCITI Y TNIIIHG+HIHDCK+
Sbjct: 150 LWIIFKRDMTIQLKEELIMNSFKTLDGRGASVHISGGPCITIQYVTNIIIHGLHIHDCKQ 209

Query: 184 GGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISN 243
           GGN  +RDSP+H G+ T+SDGDGVSIFGG ++WVDHCSLSNCNDGLIDAI GSTAITISN
Sbjct: 210 GGNTYVRDSPEHYGYRTVSDGDGVSIFGGSHVWVDHCSLSNCNDGLIDAIRGSTAITISN 269

Query: 244 NYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 303
           NY+THH+KVMLLGHSD+Y QDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
Sbjct: 270 NYLTHHNKVMLLGHSDTYEQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 329

Query: 304 MYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFR 363
           MYAIGGSA+PTI SQGNRFLAPD    KEVTKHEDAPE EWR+WNWRSEGD++LNGA+F 
Sbjct: 330 MYAIGGSANPTINSQGNRFLAPDDSSSKEVTKHEDAPEDEWRNWNWRSEGDLLLNGAFFT 389

Query: 364 QSGAGAA--SSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
            SGAG A  SSY++A SL+ARPSS VG IT+ +GAL+C+RGS C
Sbjct: 390 YSGAGPAKSSSYSKASSLAARPSSHVGEITIASGALSCKRGSHC 432

[Close]

BLAST of Carg04480 vs. Swiss-Prot
Match: sp|P24396|PLY18_SOLLC (Probable pectate lyase P18 OS=Solanum lycopersicum OX=4081 GN=9612 PE=2 SV=1)

HSP 1 Score: 639.8 bits (1649), Expect = 2.0e-182
Identity = 305/404 (75.50%), Postives = 341/404 (84.41%), Query Frame = 0


Query: 4   SFFFLLLLPLSFFFIDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCW 63
           +F  LLL PL        ++S+QDP LVVQ+V RSIN S TRRNLGYLSC +GNPID   
Sbjct: 7   TFSLLLLAPLLV------ISSIQDPELVVQDVHRSINASLTRRNLGYLSCGSGNPIDRLL 66

Query: 64  RCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEP 123
              P         + CAIGFGKNAIGG+NGR YVVTD+G+DDP+NP+PGTLRHAVIQ+EP
Sbjct: 67  AMQPQLGKKSPAFSYCAIGFGKNAIGGKNGRIYVVTDSGNDDPVNPKPGTLRHAVIQDEP 126

Query: 124 LWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKR 183
           LWIIFKRDMVIQL+QELVMNS+KTIDGRGASVH++GGPCITIH+ +NIIIHGI+IHDCK+
Sbjct: 127 LWIIFKRDMVIQLKQELVMNSYKTIDGRGASVHISGGPCITIHHTSNIIIHGINIHDCKQ 186

Query: 184 GGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISN 243
            GNGNIRDSP HSGWW +SDGDG+SIFGGKNIWVDHCSLSNC+DGLIDAIHGSTAITISN
Sbjct: 187 SGNGNIRDSPNHSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITISN 246

Query: 244 NYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 303
           NY THHDKVMLLGHSDS+TQDK MQVT+AFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE
Sbjct: 247 NYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 306

Query: 304 MYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFR 363
           MYAIGGSA+PTI SQGNRFLAP+ +YRKEVTKHEDAPES+WR WNWRSEGD+MLNGAYFR
Sbjct: 307 MYAIGGSAAPTINSQGNRFLAPNEKYRKEVTKHEDAPESQWRSWNWRSEGDLMLNGAYFR 366

Query: 364 QSGAGAASS--YARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           Q+GAGA+SS                  SIT  AG +NC++GSRC
Sbjct: 367 QTGAGASSSSTXXXXXXXXXXXXXXXXSITTNAGPVNCKKGSRC 404

[Close]

BLAST of Carg04480 vs. Swiss-Prot
Match: sp|Q9LTZ0|PLY11_ARATH (Putative pectate lyase 11 OS=Arabidopsis thaliana OX=3702 GN=At3g27400 PE=3 SV=2)

HSP 1 Score: 631.3 bits (1627), Expect = 7.3e-180
Identity = 298/404 (73.76%), Postives = 335/404 (82.92%), Query Frame = 0


Query: 4   SFFFLLLLPL--SFFFIDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDD 63
           ++ FLLLL +  +  F  S    VQDP+LVV +V RS+  + +RR+L YLSCRTGNPIDD
Sbjct: 10  AYAFLLLLTIGNTLAFSSSLPDHVQDPNLVVDDVNRSVFNA-SRRSLAYLSCRTGNPIDD 69

Query: 64  CWRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQN 123
           CWRCDPNWETNR+RLADCAIGFGKNAIGGR GR YVVTD  +DDP+NPRPGTLR+AV Q 
Sbjct: 70  CWRCDPNWETNRQRLADCAIGFGKNAIGGRKGRIYVVTDPANDDPVNPRPGTLRYAVTQE 129

Query: 124 EPLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDC 183
           EPLWIIFKRDMVI+L++EL++ SFKTIDGRG+SVH+  GPC+ IHYATNIIIHGI+IHDC
Sbjct: 130 EPLWIIFKRDMVIRLKKELIITSFKTIDGRGSSVHITDGPCLKIHYATNIIIHGINIHDC 189

Query: 184 KRGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITI 243
           K G  G I+D P H+GWW  SDGD V+IFGGK++W+DHCSLSNC+DGLIDAIHGSTAITI
Sbjct: 190 KPGSGGMIKDGPHHTGWWMQSDGDAVAIFGGKHVWIDHCSLSNCDDGLIDAIHGSTAITI 249

Query: 244 SNNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 303
           SNN+MTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
Sbjct: 250 SNNHMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH 309

Query: 304 WEMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAY 363
           WEMYAIGGSASPTIYSQGNRFLAP+ R+ KEVTKHEDAPES+WR WNWRSEGDM+LNGAY
Sbjct: 310 WEMYAIGGSASPTIYSQGNRFLAPNTRFNKEVTKHEDAPESKWRDWNWRSEGDMLLNGAY 369

Query: 364 FRQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           FR+SGA A S                          +CRRG RC
Sbjct: 370 FRESGAEAPSXXXXXXXXXXXXXXXXXXXXXXXXXXSCRRGRRC 412

[Close]

BLAST of Carg04480 vs. Swiss-Prot
Match: sp|Q9FXD8|PLY5_ARATH (Probable pectate lyase 5 OS=Arabidopsis thaliana OX=3702 GN=At1g67750 PE=2 SV=2)

HSP 1 Score: 629.8 bits (1623), Expect = 2.1e-179
Identity = 302/402 (75.12%), Postives = 339/402 (84.33%), Query Frame = 0


Query: 4   SFFFLLLLPLSFFFIDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCW 63
           S F  LLL LS  FI S+   V +P LVVQEV   IN S  RRNLG LSC TGNPIDDCW
Sbjct: 11  SLFSCLLLVLSPTFIAST--PVSEPELVVQEVNEKINAS--RRNLGVLSCGTGNPIDDCW 70

Query: 64  RCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEP 123
           RCDP WE NR+RLADCAIGFGK+AIGGR+G+ YVVTD+ D D +NP+PGTLRHAVIQ+EP
Sbjct: 71  RCDPKWEKNRQRLADCAIGFGKHAIGGRDGKIYVVTDSSDKDVVNPKPGTLRHAVIQDEP 130

Query: 124 LWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKR 183
           LWIIF RDMVI+L++EL+MNSFKTIDGRGASVH+AGG CIT+ Y TNIIIHG++IHDCKR
Sbjct: 131 LWIIFARDMVIKLKEELIMNSFKTIDGRGASVHIAGGACITVQYVTNIIIHGVNIHDCKR 190

Query: 184 GGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISN 243
            GN  +RDSP H GW T SDGD VSIFGG ++WVDHCSLSNC DGLIDAIHGSTAITISN
Sbjct: 191 KGNAYVRDSPSHYGWRTASDGDAVSIFGGSHVWVDHCSLSNCADGLIDAIHGSTAITISN 250

Query: 244 NYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWE 303
           NY++HH+KVMLLGHSDSYT+DKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW+
Sbjct: 251 NYLSHHNKVMLLGHSDSYTRDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWQ 310

Query: 304 MYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFR 363
           MYAIGGSA+PTI SQGNRFLAP+    KEVTK+EDAP S+W+ WNWRSEGD+ LNGA+F 
Sbjct: 311 MYAIGGSAAPTINSQGNRFLAPNDHVFKEVTKYEDAPRSKWKKWNWRSEGDLFLNGAFFT 370

Query: 364 QSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
            SG GA+SSYA+A        SLV S+T  AGAL CR+GSRC
Sbjct: 371 PSGGGASSSYAKAXXXXXXXXSLVASVTSNAGALFCRKGSRC 408

[Close]

BLAST of Carg04480 vs. TrEMBL
Match: tr|A0A0A0KNX3|A0A0A0KNX3_CUCSA (Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_5G517820 PE=3 SV=1)

HSP 1 Score: 750.0 bits (1935), Expect = 2.8e-213
Identity = 354/388 (91.24%), Postives = 370/388 (95.36%), Query Frame = 0


Query: 19  DSSLASV-QDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCWRCDPNWETNRKRLA 78
           +SSL  V Q PHLVV+EVQRSIN S  RRNLGYLSC TGNPIDDCWRCD NWETNRKRLA
Sbjct: 33  NSSLPFVHQHPHLVVEEVQRSINGS--RRNLGYLSCGTGNPIDDCWRCDSNWETNRKRLA 92

Query: 79  DCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLWIIFKRDMVIQLR 138
           DCAIGFGKNAIGG+NGRFYVVTD+G+DDPLNPRPGTLRHAVIQNEPLWIIFKRDMVI+L 
Sbjct: 93  DCAIGFGKNAIGGKNGRFYVVTDSGNDDPLNPRPGTLRHAVIQNEPLWIIFKRDMVIKLA 152

Query: 139 QELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGGNGNIRDSPQHSG 198
           QELVMNSFKTIDGRGASVH+AGGPCI IHYATNIIIHGIHIHDCKRGGN NIRDSPQH+G
Sbjct: 153 QELVMNSFKTIDGRGASVHLAGGPCIKIHYATNIIIHGIHIHDCKRGGNANIRDSPQHAG 212

Query: 199 WWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGH 258
           WWT SDGDGVSI GGK IW+DHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGH
Sbjct: 213 WWTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGH 272

Query: 259 SDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYS 318
           SDS+TQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYS
Sbjct: 273 SDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYS 332

Query: 319 QGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQSGAGAASSYARAY 378
           QGNRF+AP  R+RKEVTKHEDAPESEWRHWNWRSEGD++LNGAYFRQSGAGA+SSYARAY
Sbjct: 333 QGNRFVAPYNRFRKEVTKHEDAPESEWRHWNWRSEGDLLLNGAYFRQSGAGASSSYARAY 392

Query: 379 SLSARPSSLVGSITVTAGALNCRRGSRC 406
           SLSARPSSLVG IT+TAGALNCRRGSRC
Sbjct: 393 SLSARPSSLVGDITITAGALNCRRGSRC 418

[Close]

BLAST of Carg04480 vs. TrEMBL
Match: tr|A0A1S3C8C5|A0A1S3C8C5_CUCME (Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103498129 PE=3 SV=1)

HSP 1 Score: 748.8 bits (1932), Expect = 6.3e-213
Identity = 356/388 (91.75%), Postives = 367/388 (94.59%), Query Frame = 0


Query: 19  DSSLASV-QDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCWRCDPNWETNRKRLA 78
           +SSL  V Q PHL V+EVQRSIN S  RRNLGYLSC TGNPIDDCWRCD NWETNRKRLA
Sbjct: 32  NSSLPFVHQHPHLAVEEVQRSINGS--RRNLGYLSCGTGNPIDDCWRCDSNWETNRKRLA 91

Query: 79  DCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPLWIIFKRDMVIQLR 138
           DCAIGFGKNAIGG+NGRFYVVTDA DDDPLNPRPGTLRHAVIQNEPLWIIFKRDMVIQL 
Sbjct: 92  DCAIGFGKNAIGGKNGRFYVVTDARDDDPLNPRPGTLRHAVIQNEPLWIIFKRDMVIQLE 151

Query: 139 QELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRGGNGNIRDSPQHSG 198
           QELVMNSFKTIDGRGASVHVAGGPCI IHYATNIIIHGIHIHDCKRGGN NIRDSPQH+G
Sbjct: 152 QELVMNSFKTIDGRGASVHVAGGPCIKIHYATNIIIHGIHIHDCKRGGNANIRDSPQHAG 211

Query: 199 WWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGH 258
           WWT SDGDGVSI GGK IW+DHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGH
Sbjct: 212 WWTASDGDGVSILGGKQIWIDHCSLSNCNDGLIDAIHGSTAITISNNYMTHHDKVMLLGH 271

Query: 259 SDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYS 318
           SDS+TQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYS
Sbjct: 272 SDSFTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIYS 331

Query: 319 QGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQSGAGAASSYARAY 378
           QGNRF+AP  R+RKEVTKHEDAPESEWR+WNWRSEGDM+LNGAYFRQSGAGA SSYARAY
Sbjct: 332 QGNRFVAPYNRFRKEVTKHEDAPESEWRYWNWRSEGDMLLNGAYFRQSGAGARSSYARAY 391

Query: 379 SLSARPSSLVGSITVTAGALNCRRGSRC 406
           SLSARPSSLVG IT+TAGALNCRRGSRC
Sbjct: 392 SLSARPSSLVGDITLTAGALNCRRGSRC 417

[Close]

BLAST of Carg04480 vs. TrEMBL
Match: tr|B9GIX5|B9GIX5_POPTR (Pectate lyase OS=Populus trichocarpa OX=3694 GN=POPTR_001G339500v3 PE=3 SV=1)

HSP 1 Score: 731.9 bits (1888), Expect = 8.0e-208
Identity = 349/401 (87.03%), Postives = 374/401 (93.27%), Query Frame = 0


Query: 5   FFFLLLLPLSFFFIDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDCWR 64
           FFF    P    F+ SS  S+QDP LVVQEV RSIN S  RRNLGYLSC TGNPIDDCWR
Sbjct: 10  FFFSAPAP---HFVFSS--SIQDPELVVQEVHRSINAS--RRNLGYLSCGTGNPIDDCWR 69

Query: 65  CDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNEPL 124
           CDPNWE NR+RLADCAIGFGKNAIGGRNGR YVVTD+G+DD +NP+PGTLRHAVIQ+EPL
Sbjct: 70  CDPNWERNRQRLADCAIGFGKNAIGGRNGRIYVVTDSGNDDAVNPKPGTLRHAVIQDEPL 129

Query: 125 WIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCKRG 184
           WIIFKRDMVIQLRQELVMNS+KTIDGRGASVH+AGGPCITIHYATNIIIHGIHIHDCK+G
Sbjct: 130 WIIFKRDMVIQLRQELVMNSYKTIDGRGASVHIAGGPCITIHYATNIIIHGIHIHDCKQG 189

Query: 185 GNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITISNN 244
           GNG+IRDSP+HSGWWT SDGDGVSIF  K+IWVDHCSLSNC+DGLIDAIHGSTAITISNN
Sbjct: 190 GNGDIRDSPRHSGWWTPSDGDGVSIFASKHIWVDHCSLSNCHDGLIDAIHGSTAITISNN 249

Query: 245 YMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEM 304
           +MTHHDKVMLLGHSDSYTQDK+MQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEM
Sbjct: 250 FMTHHDKVMLLGHSDSYTQDKDMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHWEM 309

Query: 305 YAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYFRQ 364
           YAIGGSASPTI SQGNRFLAP+ R+ KEVTKHEDAPESEWRHWNWRSEGD+MLNGAYFRQ
Sbjct: 310 YAIGGSASPTINSQGNRFLAPNRRFNKEVTKHEDAPESEWRHWNWRSEGDLMLNGAYFRQ 369

Query: 365 SGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           SGAGA+SSYARAYSLSARPSSLVGS+T+T+G LNCR+GSRC
Sbjct: 370 SGAGASSSYARAYSLSARPSSLVGSMTLTSGVLNCRKGSRC 403

[Close]

BLAST of Carg04480 vs. TrEMBL
Match: tr|A0A2P5CTK8|A0A2P5CTK8_PARAD (Pectate lyase OS=Parasponia andersonii OX=3476 GN=PanPLL9 PE=3 SV=1)

HSP 1 Score: 720.3 bits (1858), Expect = 2.4e-204
Identity = 338/403 (83.87%), Postives = 373/403 (92.56%), Query Frame = 0


Query: 8   LLLLPLSFF-----FIDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDC 67
           L +LPL F       + +S ASVQDP LVV EV RSIN S  RRNLGYLSC TGNPIDDC
Sbjct: 4   LSILPLLFLTSFLAAVSTSSASVQDPELVVDEVHRSINAS--RRNLGYLSCGTGNPIDDC 63

Query: 68  WRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNE 127
           WRCDPNWE NR+RLADCAIGFGK+AIGG+NGR YVV+D+GDDDP+NPRPGTLRHAVIQ+E
Sbjct: 64  WRCDPNWERNRQRLADCAIGFGKDAIGGKNGRLYVVSDSGDDDPVNPRPGTLRHAVIQDE 123

Query: 128 PLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCK 187
           PLWIIFKRDMVIQL++ELVMNSFKTIDGRGASVH+AGGPCITIHY +NIIIHGI+IHDCK
Sbjct: 124 PLWIIFKRDMVIQLKKELVMNSFKTIDGRGASVHIAGGPCITIHYVSNIIIHGINIHDCK 183

Query: 188 RGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITIS 247
            GG+GNIRDSP+HSG+W +SDGDGVSIFGG++IWVDHCSLSNC DGLID IHGSTA+TIS
Sbjct: 184 PGGDGNIRDSPEHSGYWRVSDGDGVSIFGGRHIWVDHCSLSNCRDGLIDVIHGSTAVTIS 243

Query: 248 NNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 307
           NNY THHDKVMLLGHSD+YTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW
Sbjct: 244 NNYFTHHDKVMLLGHSDAYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 303

Query: 308 EMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYF 367
           EMYAIGGSA+PTI SQGNRFLAPD +++KEVTKHE+APES+WR+WNWRSEGD+ LNGA+F
Sbjct: 304 EMYAIGGSAAPTINSQGNRFLAPDEQFKKEVTKHEEAPESQWRNWNWRSEGDLFLNGAFF 363

Query: 368 RQSGAGAASSYARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           RQ+GAGA+SSYARAYSLSARPSSLVGSITV AGALNCR+GSRC
Sbjct: 364 RQTGAGASSSYARAYSLSARPSSLVGSITVKAGALNCRKGSRC 404

[Close]

BLAST of Carg04480 vs. TrEMBL
Match: tr|A0A1J6IMI4|A0A1J6IMI4_NICAT (Pectate lyase OS=Nicotiana attenuata OX=49451 GN=A4A49_26358 PE=3 SV=1)

HSP 1 Score: 720.3 bits (1858), Expect = 2.4e-204
Identity = 335/404 (82.92%), Postives = 372/404 (92.08%), Query Frame = 0


Query: 3   ASFFFLLLLPLSFFFIDSSLASVQDPHLVVQEVQRSINESRTRRNLGYLSCRTGNPIDDC 62
           +S  F+L+L ++       ++S+QDP LVVQEV RSIN S TRRNLGYLSC TGNPIDDC
Sbjct: 2   SSLLFILVLFVTLLLTPLLVSSIQDPELVVQEVHRSINASLTRRNLGYLSCGTGNPIDDC 61

Query: 63  WRCDPNWETNRKRLADCAIGFGKNAIGGRNGRFYVVTDAGDDDPLNPRPGTLRHAVIQNE 122
           WRCDPNWE NR+RLADCAIGFGKNAIGGRNGR YVVTD+G+DDP+NP+PGTLRHAVIQ+E
Sbjct: 62  WRCDPNWEKNRQRLADCAIGFGKNAIGGRNGRIYVVTDSGNDDPVNPKPGTLRHAVIQDE 121

Query: 123 PLWIIFKRDMVIQLRQELVMNSFKTIDGRGASVHVAGGPCITIHYATNIIIHGIHIHDCK 182
           PLWIIFKRDMVIQL+QELVMNSFKTIDGRG SVH++GGPCITIHY+TNIIIHGI+IHDCK
Sbjct: 122 PLWIIFKRDMVIQLKQELVMNSFKTIDGRGTSVHISGGPCITIHYSTNIIIHGINIHDCK 181

Query: 183 RGGNGNIRDSPQHSGWWTISDGDGVSIFGGKNIWVDHCSLSNCNDGLIDAIHGSTAITIS 242
           + GNGNIRDSP HSGWW +SDGDG+SIFGGKNIWVDHCSLSNC+DGLIDAIHGSTAITIS
Sbjct: 182 QSGNGNIRDSPHHSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITIS 241

Query: 243 NNYMTHHDKVMLLGHSDSYTQDKNMQVTIAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 302
           NNY THHDKVMLLGHSDS+TQDK MQVT+AFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW
Sbjct: 242 NNYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTHW 301

Query: 303 EMYAIGGSASPTIYSQGNRFLAPDVRYRKEVTKHEDAPESEWRHWNWRSEGDMMLNGAYF 362
           EMYAIGGSA+PTI SQGNRFLAP+ ++RKEVTKHE+APESEWR WNWRSEGD+MLNGAYF
Sbjct: 302 EMYAIGGSAAPTINSQGNRFLAPNQKFRKEVTKHENAPESEWRSWNWRSEGDLMLNGAYF 361

Query: 363 RQSGAGAASS-YARAYSLSARPSSLVGSITVTAGALNCRRGSRC 406
           RQ+GAGA+SS YARA SLSARPS+LVGS+T  AG L C++GSRC
Sbjct: 362 RQTGAGASSSTYARASSLSARPSTLVGSMTTNAGPLGCKKGSRC 405

The following BLAST results are available for this feature:

BLAST of Carg04480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023526071.1	1.1e-240	99.01	pectate lyase-like [Cucurbita pepo subsp. pepo]	[more]
XP_022959813.1	8.3e-233	100.00	pectate lyase-like [Cucurbita moschata]	[more]
XP_022991156.1	5.9e-231	98.96	pectate lyase-like, partial [Cucurbita maxima]	[more]
XP_022134052.1	1.7e-217	88.59	pectate lyase-like [Momordica charantia]	[more]
XP_004142773.1	4.3e-213	91.24	PREDICTED: pectate lyase-like [Cucumis sativus] >KGN51335.1 hypothetical protein...	[more]

BLAST of Carg04480 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G63180.1	3.1e-189	76.73	Pectin lyase-like superfamily protein	[more]
AT3G27400.1	4.0e-181	73.76	Pectin lyase-like superfamily protein	[more]
AT1G67750.1	1.2e-180	75.12	Pectate lyase family protein	[more]
AT4G24780.1	1.0e-176	72.50	Pectin lyase-like superfamily protein	[more]
AT5G48900.1	6.4e-171	68.87	Pectin lyase-like superfamily protein	[more]

BLAST of Carg04480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O24554\|PLY_ZINVI	8.5e-197	81.20	Pectate lyase OS=Zinnia violacea OX=34245 PE=1 SV=1	[more]
sp\|Q93Z25\|PLY22_ARATH	5.5e-188	76.73	Probable pectate lyase 22 OS=Arabidopsis thaliana OX=3702 GN=At5g63180 PE=2 SV=1	[more]
sp\|P24396\|PLY18_SOLLC	2.0e-182	75.50	Probable pectate lyase P18 OS=Solanum lycopersicum OX=4081 GN=9612 PE=2 SV=1	[more]
sp\|Q9LTZ0\|PLY11_ARATH	7.3e-180	73.76	Putative pectate lyase 11 OS=Arabidopsis thaliana OX=3702 GN=At3g27400 PE=3 SV=2	[more]
sp\|Q9FXD8\|PLY5_ARATH	2.1e-179	75.12	Probable pectate lyase 5 OS=Arabidopsis thaliana OX=3702 GN=At1g67750 PE=2 SV=2	[more]

BLAST of Carg04480 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KNX3\|A0A0A0KNX3_CUCSA	2.8e-213	91.24	Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_5G517820 PE=3 SV=1	[more]
tr\|A0A1S3C8C5\|A0A1S3C8C5_CUCME	6.3e-213	91.75	Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103498129 PE=3 SV=1	[more]
tr\|B9GIX5\|B9GIX5_POPTR	8.0e-208	87.03	Pectate lyase OS=Populus trichocarpa OX=3694 GN=POPTR_001G339500v3 PE=3 SV=1	[more]
tr\|A0A2P5CTK8\|A0A2P5CTK8_PARAD	2.4e-204	83.87	Pectate lyase OS=Parasponia andersonii OX=3476 GN=PanPLL9 PE=3 SV=1	[more]
tr\|A0A1J6IMI4\|A0A1J6IMI4_NICAT	2.4e-204	82.92	Pectate lyase OS=Nicotiana attenuata OX=49451 GN=A4A49_26358 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011050	Pectin_lyase_fold/virulence
IPR012334	Pectin_lyas_fold
IPR002022	Pec_lyase
IPR018082	AmbAllergen

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04480-RA	Carg04480-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 79..96 score: 58.99 coord: 103..128 score: 68.68 coord: 305..324 score: 78.33 coord: 347..371 score: 53.52 coord: 203..224 score: 58.23 coord: 376..399 score: 40.67 coord: 139..155 score: 71.43 coord: 283..302 score: 78.1
IPR002022	Pectate lyase	SMART	SM00656	amb_all	coord: 131..328 e-value: 1.2E-103 score: 360.4
IPR002022	Pectate lyase	PFAM	PF00544	Pec_lyase_C	coord: 137..322 e-value: 1.2E-20 score: 73.9
IPR012334	Pectin lyase fold	GENE3D	G3DSA:2.160.20.10		coord: 56..398 e-value: 6.0E-123 score: 412.2
None	No IPR available	PANTHER	PTHR31683	FAMILY NOT NAMED	coord: 7..405
None	No IPR available	PANTHER	PTHR31683:SF29	PECTATE LYASE 11-RELATED	coord: 7..405
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	SSF51126	Pectin lyase-like	coord: 32..400

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg04480	Cla004642	Watermelon (97103) v1	carwmB0679
Carg04480	Csa5G517820	Cucumber (Chinese Long) v2	carcuB0707
Carg04480	MELO3C021607	Melon (DHL92) v3.5.1	carmeB0682
Carg04480	ClCG09G019510	Watermelon (Charleston Gray)	carwcgB0657
Carg04480	CSPI05G17960	Wild cucumber (PI 183967)	carcpiB0721
Carg04480	Cucsa.011030	Cucumber (Gy14) v1	carcgyB0766
Carg04480	CmaCh04G026640	Cucurbita maxima (Rimu)	carcmaB0967
Carg04480	CmoCh04G027910	Cucurbita moschata (Rifu)	carcmoB0940
Carg04480	Lsi02G016140	Bottle gourd (USVL1VR-Ls)	carlsiB623
Carg04480	Cp4.1LG01g23700	Cucurbita pepo (Zucchini)	carcpeB0965
Carg04480	CsGy5G017640	Cucumber (Gy14) v2	carcgybB0685
Carg04480	MELO3C021607.2	Melon (DHL92) v3.6.1	carmedB0694
Carg04480	CsaV3_5G026870	Cucumber (Chinese Long) v3	carcucB0724
Carg04480	Cla97C09G180950	Watermelon (97103) v2	carwmbB0714
Carg04480	Bhi06G000499	Wax gourd	carwgoB0801

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg04480	Silver-seed gourd	carcarB306
Carg04480	Silver-seed gourd	carcarB444
Carg04480	Cucurbita maxima (Rimu)	carcmaB0958
Carg04480	Cucurbita maxima (Rimu)	carcmaB0960
Carg04480	Cucurbita maxima (Rimu)	carcmaB0961
Carg04480	Cucurbita moschata (Rifu)	carcmoB0934
Carg04480	Cucurbita moschata (Rifu)	carcmoB0935
Carg04480	Cucurbita moschata (Rifu)	carcmoB0936
Carg04480	Cucurbita pepo (Zucchini)	carcpeB0962
Carg04480	Cucurbita pepo (Zucchini)	carcpeB0967
Carg04480	Cucurbita pepo (Zucchini)	carcpeB0969