Cp4.1LG01g21860 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g21860
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Unknown protein
Location	Cp4.1LG01 : 20512442 .. 20513068 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAACTCGAAACTACGACCAAATCTCTCAAAAATCACTCGAAATCAAGCATGAAGATAATAGATTCTTGTCGAGGGCTGTGTCAAATGAGGCTAATTCCGCCGCTAACTCCTCTTTTAGAGTGTATTACGGCGGCGCTGCCGGTGCAATTCCGTTCAGATGGGAGTCCCGTCCCGGCACTCCAAAGCATACTTTCTCAGAAACATCAATCCCTCCTCTTACGCCGCCGCCGTCTTATTATTCTTCCTCTTCACATTCTACCTCCAAGGCCTCTTCCCAACCAACCCTTTTGAGCTCTATTTTTCCCCGGCGAACTTTGTCGTCCTTCTCCGCCTCTTCCTCGTCCTCCTGTTCCTCACCGTCGCCATTCGTTAGACCGAAATTCTTTAAGCGTCGTCGTCGCCACTCGTTGGATTCTCAGAGCTTGCCGTTGGAGTATAACGACAACGACAACGACGGGGAGGAGGCGGTGGGGAGCTCCAATTCTCCGACGTCGACATTGGGGTATGGTGGTTGTTCGGGTAGGGGATCATTTTTGGGAGGTTGCTACCAGTTAGTGAGCGTGAAGAATGCTTTGTTGACCATTGTTGGGCATGGATCTACAACACGAGGTACTCTTAATTAG

mRNA sequence

ATGCAAACTCGAAACTACGACCAAATCTCTCAAAAATCACTCGAAATCAAGCATGAAGATAATAGATTCTTGTCGAGGGCTGTGTCAAATGAGGCTAATTCCGCCGCTAACTCCTCTTTTAGAGTGTATTACGGCGGCGCTGCCGGTGCAATTCCGTTCAGATGGGAGTCCCGTCCCGGCACTCCAAAGCATACTTTCTCAGAAACATCAATCCCTCCTCTTACGCCGCCGCCGTCTTATTATTCTTCCTCTTCACATTCTACCTCCAAGGCCTCTTCCCAACCAACCCTTTTGAGCTCTATTTTTCCCCGGCGAACTTTGTCGTCCTTCTCCGCCTCTTCCTCGTCCTCCTGTTCCTCACCGTCGCCATTCGTTAGACCGAAATTCTTTAAGCGTCGTCGTCGCCACTCGTTGGATTCTCAGAGCTTGCCGTTGGAGTATAACGACAACGACAACGACGGGGAGGAGGCGGTGGGGAGCTCCAATTCTCCGACGTCGACATTGGGGTATGGTGGTTGTTCGGGTAGGGGATCATTTTTGGGAGGTTGCTACCAGTTAGTGAGCGTGAAGAATGCTTTGTTGACCATTGTTGGGCATGGATCTACAACACGAGGTACTCTTAATTAG

Coding sequence (CDS)

ATGCAAACTCGAAACTACGACCAAATCTCTCAAAAATCACTCGAAATCAAGCATGAAGATAATAGATTCTTGTCGAGGGCTGTGTCAAATGAGGCTAATTCCGCCGCTAACTCCTCTTTTAGAGTGTATTACGGCGGCGCTGCCGGTGCAATTCCGTTCAGATGGGAGTCCCGTCCCGGCACTCCAAAGCATACTTTCTCAGAAACATCAATCCCTCCTCTTACGCCGCCGCCGTCTTATTATTCTTCCTCTTCACATTCTACCTCCAAGGCCTCTTCCCAACCAACCCTTTTGAGCTCTATTTTTCCCCGGCGAACTTTGTCGTCCTTCTCCGCCTCTTCCTCGTCCTCCTGTTCCTCACCGTCGCCATTCGTTAGACCGAAATTCTTTAAGCGTCGTCGTCGCCACTCGTTGGATTCTCAGAGCTTGCCGTTGGAGTATAACGACAACGACAACGACGGGGAGGAGGCGGTGGGGAGCTCCAATTCTCCGACGTCGACATTGGGGTATGGTGGTTGTTCGGGTAGGGGATCATTTTTGGGAGGTTGCTACCAGTTAGTGAGCGTGAAGAATGCTTTGTTGACCATTGTTGGGCATGGATCTACAACACGAGGTACTCTTAATTAG

Protein sequence

MQTRNYDQISQKSLEIKHEDNRFLSRAVSNEANSAANSSFRVYYGGAAGAIPFRWESRPGTPKHTFSETSIPPLTPPPSYYSSSSHSTSKASSQPTLLSSIFPRRTLSSFSASSSSSCSSPSPFVRPKFFKRRRRHSLDSQSLPLEYNDNDNDGEEAVGSSNSPTSTLGYGGCSGRGSFLGGCYQLVSVKNALLTIVGHGSTTRGTLN

Homology

[Close]

BLAST of Cp4.1LG01g21860 vs. TrEMBL
Match: A0A0A0K7T8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014460 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 3.8e-67
Identity = 155/233 (66.52%), Postives = 175/233 (75.11%), Query Frame = 1


Query: 1   MQTRNYDQISQKSLEIKHEDNRFLSRAVSNEANSAANSSFRVYYGGAAGAIPFRWESRPG 60
           M+T++YDQISQKS  I   +++F +RA+S E NS  NSSFRVYYGGA GAIPFRWESRPG
Sbjct: 1   MKTQSYDQISQKSFPITKHEDKFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 61  TPKHTFSETSIPPLTPPPSYYSSSSHSTSKASSQPTLLSSIFPRRT-------------- 120
           TPKHTFS+TSIPPLTPPPSY+ SSSHSTSKASS+PTLLSSIFPR T              
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYF-SSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSS 120

Query: 121 --------LSSFSASSSSSCSSPSPFVRPKFFKRRRRHSLDSQSLPLEYNDNDNDGEEAV 180
                   L+S+S+S SSS SSPSPFVRPKFFKRRRR S D  SLP EY+ +D DG+E V
Sbjct: 121 GSSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFS-DIPSLPFEYSFDDKDGDEVV 180

Query: 181 GSS--NSPTSTLGY-GGCSGRGSFLGGCYQLVSVKNALLTIVGHGSTTRGTLN 209
             S  NSPTS L + GG S R S  GGCYQLVSVKNALL+IVGHGS +RGTLN
Sbjct: 181 AGSAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKNALLSIVGHGSASRGTLN 231

[Close]

BLAST of Cp4.1LG01g21860 vs. TrEMBL
Match: A0A061FSH6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_045439 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 8.9e-32
Identity = 105/209 (50.24%), Postives = 129/209 (61.72%), Query Frame = 1


Query: 11  QKSLEIKHEDNRFLSRAVSNEANSAANSSFRVYYGGAAGAIPFRWESRPGTPKHTFSETS 70
           QK L+IK +D++F SR +S E  S ANSS RVYYGGA+GA+PF WES+PGTPKH  S+T+
Sbjct: 12  QKGLQIK-QDDKFFSRLMSKET-SMANSSCRVYYGGASGAVPFMWESQPGTPKHPCSDTT 71

Query: 71  IPPLTPPPSYYSS-SSHSTSKASSQPTLLSSIFPRRT-----------------LSSFSA 130
           +PPLTPPPSY+SS  S S  K S +PTLLS IFPR T                  SSFS+
Sbjct: 72  LPPLTPPPSYHSSCKSKSMQKTSMKPTLLSFIFPRLTPRKNHASPSSSRSSTSSSSSFSS 131

Query: 131 SSSSSCSSPSPFVRPKFFKRRRRHSLDSQSLPLEYNDNDNDGEEAVGSSNSPTSTLGYGG 190
            SSS   SPS     KF    +R S  S S    +N  D+D EE +G   SPTSTL +G 
Sbjct: 132 RSSSLHGSPSAPRNQKF----QRRSYFSFSRSPVHNCIDDDDEEGLG---SPTSTLCFGV 191

Query: 191 CSGRGSFLGGCYQLVSVKNALLTIVGHGS 202
                +  GGC  +V++K ALL+IV HGS
Sbjct: 192 KRRNLNEFGGCQSMVNMKKALLSIVSHGS 211

[Close]

BLAST of Cp4.1LG01g21860 vs. TrEMBL
Match: F6GXY5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0058g01010 PE=4 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 7.8e-28
Identity = 105/216 (48.61%), Postives = 129/216 (59.72%), Query Frame = 1


Query: 4   RNYDQISQKSLEIKHEDNRFLSRAVSNEANSAANSSFRVYYGGAAGAIPFRWESRPGTPK 63
           R+   + QK L+IK ED++F SR +S E+ S AN S RVYYGG  GA+PF WES+PGTPK
Sbjct: 3   RSEQDVPQKRLQIK-EDDKFFSRLLSKES-SMANPSSRVYYGGVTGAVPFTWESQPGTPK 62

Query: 64  HTFSETSIPPLTPPPSYYSSS-SHSTSKASSQPTLLSSIFPR-----------RTLSSFS 123
           +TFSE+S+PPLTPPPSYYS+S     +K  S+  LL SIFPR             LSS S
Sbjct: 63  YTFSESSLPPLTPPPSYYSNSMDKKPNKKHSRSNLLHSIFPRMNHNNNNPKKPNVLSSPS 122

Query: 124 ASSS-SSCSSP-----SPFVRPKFFKRRRRHSLDSQSLPLEYNDNDNDGEEAVGSSNSPT 183
            SSS SS SSP     S  + P F +RRR  S  S      ++   +  EEAV    SPT
Sbjct: 123 LSSSCSSWSSPRSSSMSGSLTPNFLRRRRCCSSRS-----SFDSGADYEEEAV----SPT 182

Query: 184 STLGYGGCSGRGSFLGGCYQLVSVKNALLTIVGHGS 202
           STL    C   GS L G   +V +K A L++VGHGS
Sbjct: 183 STL----CFRMGSGLRGRCSVVVMKKAFLSMVGHGS 203

[Close]

BLAST of Cp4.1LG01g21860 vs. TrEMBL
Match: B9S4B9_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0689170 PE=4 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 3.0e-27
Identity = 95/226 (42.04%), Postives = 133/226 (58.85%), Query Frame = 1


Query: 4   RNYDQISQKSLEIKHEDNRFLSRAVSNEANSAANSSFRVYYGGAAGAIPFRWESRPGTPK 63
           R++D+++Q+SLEIK +D +F +R +S E  S ANSS RVYYGGA+GA+PF WESRPGTPK
Sbjct: 6   RSHDELNQESLEIK-KDEKFFTRIMSKET-SMANSSCRVYYGGASGAVPFTWESRPGTPK 65

Query: 64  HTF---SETSIPPLTPPPSYYSSSSHSTSKASSQPTLLSSIFPR---------------- 123
           HT    + ++IPPLTPPPSYYS+S   + +  ++  L ++I PR                
Sbjct: 66  HTSFADNTSNIPPLTPPPSYYSTSKSKSMRKRTKQNLFNTIIPRLMTKKTSHVSPSSSMS 125

Query: 124 -RTLSSFSASSSSSCSSPSPFVRPKFF---KRRRRHSLDSQSLPLEYNDNDNDGEEAVGS 183
             T SS S+S +S  SS S    P  F   K R+         P+ Y  +D+D E  +  
Sbjct: 126 STTTSSSSSSWTSRSSSSSYHSSPATFNDSKSRKHPCFVCSKSPIHYGVDDDDEEHGLEL 185

Query: 184 SNSPTSTLGYGGCSGRGSFLGGCYQLVSVKNALLTIVGHGSTTRGT 207
            +S  S L YGG S   +  GG Y + ++K+ALL+IVGHG+   G+
Sbjct: 186 FSS--SRLCYGGKSKGLNVFGGRYIMENMKSALLSIVGHGNNGHGS 227

[Close]

BLAST of Cp4.1LG01g21860 vs. TrEMBL
Match: A0A0D2V0E7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G015800 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.3e-26
Identity = 99/223 (44.39%), Postives = 130/223 (58.30%), Query Frame = 1


Query: 11  QKSLEIKHEDNRFLSRAVSNEANSAANSSFRVYYGGAAGAIPFRWESRPGTPKHTFSETS 70
           QK L+IK +D++F SR +S E  S ANSS RVYYGGA+GA+PF WES PGTPKH   +T+
Sbjct: 13  QKGLQIK-QDDKFFSRLMSKET-SMANSSCRVYYGGASGAVPFMWESHPGTPKHPSCDTA 72

Query: 71  IPPLTPPPSYYSS-SSHSTSKASSQPTLLSSIFPR-----------RTLSSFSASSSSS- 130
           IPPLTPPPSYYSS +S S      + TLL+SIFPR            + SS S++SSSS 
Sbjct: 73  IPPLTPPPSYYSSFNSKSKQTKGLKSTLLNSIFPRLITARKSQASPSSSSSRSSTSSSSS 132

Query: 131 ---CSS---------PSPFVRPKFFKRRRRHSLDSQSLPLEYNDNDNDGEEAVGSSNSPT 190
              CSS         P   +  K F R+  +   S+S P+    +D+D         SPT
Sbjct: 133 LSPCSSLHDAGSSPLPKSSINRKLFHRQMSYFSCSRS-PVHSCMDDDDHHHENEGLGSPT 192

Query: 191 STLGYGGCSGRGSFLGGCYQLVSVKNALLTIVGHGSTTRGTLN 209
           STL +G      +   GC  ++++K ALL++V HGS  +GT N
Sbjct: 193 STLCFGVKPRNLNVFKGCQSMINMKKALLSMVSHGS-GQGTSN 231

[Close]

BLAST of Cp4.1LG01g21860 vs. TAIR10
Match: AT2G40475.1 (AT2G40475.1 unknown protein)

HSP 1 Score: 92.4 bits (228), Expect = 3.5e-19
Identity = 80/196 (40.82%), Postives = 111/196 (56.63%), Query Frame = 1


Query: 19  EDNRFLSRAVSNEANSAANSSFRVYYGGAAGAIPFRWESRPGTPKHT-FSET-SIPPLTP 78
           + N  +S  +  + +S  NSS R+YY G A ++PF WE+RPGTPKH  FSE+  +PPLTP
Sbjct: 8   DSNGVISSKIIVKESSQVNSSSRIYYYGGA-SVPFLWETRPGTPKHALFSESLRLPPLTP 67

Query: 79  PPSYYSSSSHSTSKASSQPTLLSSIFPRRTLS--------SFSASSSSSCSSPSPFVRPK 138
           PPSYYSSSS S +K S   T+  + F +  LS        S+S++SSSS SS S    P 
Sbjct: 68  PPSYYSSSSSSGNKLSKARTIKQTRFVKTLLSRHVSRPSFSWSSASSSSSSSYSSSSPPS 127

Query: 139 FFKRRRRHSLDSQSLPLEYNDNDNDGEEAVGSSNSPTSTLGYGGCSGRGSFLGGCYQLVS 198
             + R R         ++    ++D EE V  S+SPTSTL Y    G  S +G      S
Sbjct: 128 KVEHRPRKCYSCSRSYVK----EDDEEEIV--SSSPTSTLCYK--RGFSSSMG------S 187

Query: 199 VKNALLTIVGHGSTTR 205
           +K AL +++ HGS+ +
Sbjct: 188 MKRALCSVLSHGSSRK 188

[Close]

BLAST of Cp4.1LG01g21860 vs. TAIR10
Match: AT3G56260.2 (AT3G56260.2 unknown protein)

HSP 1 Score: 70.1 bits (170), Expect = 1.8e-12
Identity = 69/173 (39.88%), Postives = 87/173 (50.29%), Query Frame = 1


Query: 43  YYGGAAGAIPFRWESRPGTPK-HTFSETSIP-PLTPPPSYYSSSSHSTSKASSQPTLLSS 102
           YYGGA  +IPF WESRPGTPK H  S++S+P PLTPPPSYYSS   ST +  S+     S
Sbjct: 18  YYGGA--SIPFIWESRPGTPKNHLCSDSSLPLPLTPPPSYYSSGILSTPRTQSKVRSKLS 77

Query: 103 IF---------------PRRTLS---SFSASSSSSCSSPSPFVRPKFFKRRRRHSLDSQS 162
            F                ++T S   S+S++SSSS  S SP   P   K+R  H   S  
Sbjct: 78  KFLSFSMFSDLRRSNHGSKKTASSSFSWSSTSSSSSFSSSP---PHSLKKRMSHDKKSPL 137

Query: 163 LPLEYNDNDNDGEEAVGSSNSPTSTLGYGGCSGRGSFLGGCYQLVSVKNALLT 196
           L   Y +++          +SPTSTL    C   G  LG    + SV  AL +
Sbjct: 138 LYANYEEDE--------LRSSPTSTL----CCSNGGRLGCSSSMGSVTRALFS 173

[Close]

BLAST of Cp4.1LG01g21860 vs. TAIR10
Match: AT5G01790.1 (AT5G01790.1 unknown protein)

HSP 1 Score: 64.3 bits (155), Expect = 1.0e-10
Identity = 50/121 (41.32%), Postives = 67/121 (55.37%), Query Frame = 1


Query: 13  SLEIKHEDNRFLSRAVSNEAN-----SAANSSFRVYY-GGAAGAIPFRWESRPGTPKHTF 72
           SL +K +D    S  + +        SAA  SFR+YY  GAAGA+PF WES PGTPKH  
Sbjct: 31  SLSLKKQDTATFSGKLPSTKQRFSSVSAACPSFRIYYYDGAAGAVPFEWESHPGTPKHPS 90

Query: 73  SE-TSIPPLTPPPSYYSSSSHSTSKASSQPT-LLSSIFPRRT--LSSFSASSSSSCSSPS 124
           SE  ++PPLTPPPS++S S     + S + T  + ++ P R   LS      +   S+ S
Sbjct: 91  SELPTLPPLTPPPSHFSFSGDQIRRRSKKSTKKILALIPTRLFWLSGDHNGKAKKLSASS 150

[Close]

BLAST of Cp4.1LG01g21860 vs. TAIR10
Match: AT1G06930.1 (AT1G06930.1 unknown protein)

HSP 1 Score: 63.2 bits (152), Expect = 2.2e-10
Identity = 51/127 (40.16%), Postives = 70/127 (55.12%), Query Frame = 1


Query: 43  YYGGAAGAIPFRWESRPGTPK-----------HTFSETSIP---PLTPPPSYYSSSSHST 102
           YYGG++ A+PF+WES+PGTP+           ++ S+ + P   PLTPPPSY+ +S  ST
Sbjct: 24  YYGGSSAAVPFKWESQPGTPRRLSKRSSSSGFNSDSDFNFPVSAPLTPPPSYFYASPSST 83

Query: 103 SKASSQP--TLLSSIFPR-RTLSSFSASSSSSCSS--PSPFVRPKFFKRRRRHSLDSQSL 151
              S +   TL SS+  + R++ S  ASSSSS SS  PS  +R      RRR        
Sbjct: 84  KHVSPKKTNTLFSSLLSKNRSVPSSPASSSSSSSSSVPSSPLRTSDLSNRRRSMWFESGS 143

[Close]

BLAST of Cp4.1LG01g21860 vs. NCBI nr
Match: gi|778709655|ref|XP_011656432.1| (PREDICTED: putative protein TPRXL [Cucumis sativus])

HSP 1 Score: 262.7 bits (670), Expect = 5.5e-67
Identity = 155/233 (66.52%), Postives = 175/233 (75.11%), Query Frame = 1


Query: 1   MQTRNYDQISQKSLEIKHEDNRFLSRAVSNEANSAANSSFRVYYGGAAGAIPFRWESRPG 60
           M+T++YDQISQKS  I   +++F +RA+S E NS  NSSFRVYYGGA GAIPFRWESRPG
Sbjct: 1   MKTQSYDQISQKSFPITKHEDKFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 61  TPKHTFSETSIPPLTPPPSYYSSSSHSTSKASSQPTLLSSIFPRRT-------------- 120
           TPKHTFS+TSIPPLTPPPSY+ SSSHSTSKASS+PTLLSSIFPR T              
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYF-SSSHSTSKASSKPTLLSSIFPRLTPRKSRTSPSFSSSS 120

Query: 121 --------LSSFSASSSSSCSSPSPFVRPKFFKRRRRHSLDSQSLPLEYNDNDNDGEEAV 180
                   L+S+S+S SSS SSPSPFVRPKFFKRRRR S D  SLP EY+ +D DG+E V
Sbjct: 121 GSSSSSSSLASWSSSFSSSSSSPSPFVRPKFFKRRRRFS-DIPSLPFEYSFDDKDGDEVV 180

Query: 181 GSS--NSPTSTLGY-GGCSGRGSFLGGCYQLVSVKNALLTIVGHGSTTRGTLN 209
             S  NSPTS L + GG S R S  GGCYQLVSVKNALL+IVGHGS +RGTLN
Sbjct: 181 AGSAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKNALLSIVGHGSASRGTLN 231

[Close]

BLAST of Cp4.1LG01g21860 vs. NCBI nr
Match: gi|659113807|ref|XP_008456766.1| (PREDICTED: uncharacterized serine-rich protein C215.13 isoform X1 [Cucumis melo])

HSP 1 Score: 256.5 bits (654), Expect = 3.9e-65
Identity = 154/230 (66.96%), Postives = 170/230 (73.91%), Query Frame = 1


Query: 1   MQTRNYDQISQKSLEIKHEDNRFLSRAVSNEANSAANSSFRVYYGGAAGAIPFRWESRPG 60
           MQT+NYDQISQKS +I   ++RF +RA+S E NS  NSSFRVYYGGA GAIPFRWESRPG
Sbjct: 1   MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 61  TPKHTFSETSIPPLTPPPSYYSSSSHSTSKASSQPTLLSSIFPR------RTLSSFSASS 120
           TPKHTFS+TSIPPLTPPPSY+ SSSHSTSKASS+PTLLSSIFPR      RT  SFS+SS
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYF-SSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSS 120

Query: 121 ----------------SSSCSSPSPFVRPKFFKRRRRHSLDSQSLPLEYNDNDNDGEEAV 180
                           SSS SSPSPFVRPKFFK RRRH  D  SLP EY+ +D DG+E V
Sbjct: 121 GSSSSSSSLASWSSSFSSSSSSPSPFVRPKFFK-RRRHFSDIPSLPFEYSFDDKDGDEVV 180

Query: 181 GSS---NSPTSTLGY-GGCSGRGSFLGGCYQLVSVKNALLTIVGHGSTTR 205
             S   NSPTS L + GG S R S  GGCYQLVSVK ALL+IVGHGS +R
Sbjct: 181 AGSTAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKKALLSIVGHGSASR 228

[Close]

BLAST of Cp4.1LG01g21860 vs. NCBI nr
Match: gi|659113809|ref|XP_008456767.1| (PREDICTED: uncharacterized serine-rich protein C215.13 isoform X2 [Cucumis melo])

HSP 1 Score: 256.5 bits (654), Expect = 3.9e-65
Identity = 154/230 (66.96%), Postives = 170/230 (73.91%), Query Frame = 1


Query: 1   MQTRNYDQISQKSLEIKHEDNRFLSRAVSNEANSAANSSFRVYYGGAAGAIPFRWESRPG 60
           MQT+NYDQISQKS +I   ++RF +RA+S E NS  NSSFRVYYGGA GAIPFRWESRPG
Sbjct: 1   MQTQNYDQISQKSSQITKHEDRFFTRALSKELNSTTNSSFRVYYGGATGAIPFRWESRPG 60

Query: 61  TPKHTFSETSIPPLTPPPSYYSSSSHSTSKASSQPTLLSSIFPR------RTLSSFSASS 120
           TPKHTFS+TSIPPLTPPPSY+ SSSHSTSKASS+PTLLSSIFPR      RT  SFS+SS
Sbjct: 61  TPKHTFSDTSIPPLTPPPSYF-SSSHSTSKASSKPTLLSSIFPRLTPRKSRTFPSFSSSS 120

Query: 121 ----------------SSSCSSPSPFVRPKFFKRRRRHSLDSQSLPLEYNDNDNDGEEAV 180
                           SSS SSPSPFVRPKFFK RRRH  D  SLP EY+ +D DG+E V
Sbjct: 121 GSSSSSSSLASWSSSFSSSSSSPSPFVRPKFFK-RRRHFSDIPSLPFEYSFDDKDGDEVV 180

Query: 181 GSS---NSPTSTLGY-GGCSGRGSFLGGCYQLVSVKNALLTIVGHGSTTR 205
             S   NSPTS L + GG S R S  GGCYQLVSVK ALL+IVGHGS +R
Sbjct: 181 AGSTAPNSPTSILCFGGGSSSRASLFGGCYQLVSVKKALLSIVGHGSASR 228

[Close]

BLAST of Cp4.1LG01g21860 vs. NCBI nr
Match: gi|590570020|ref|XP_007011231.1| (Uncharacterized protein TCM_045439 [Theobroma cacao])

HSP 1 Score: 145.2 bits (365), Expect = 1.3e-31
Identity = 105/209 (50.24%), Postives = 129/209 (61.72%), Query Frame = 1


Query: 11  QKSLEIKHEDNRFLSRAVSNEANSAANSSFRVYYGGAAGAIPFRWESRPGTPKHTFSETS 70
           QK L+IK +D++F SR +S E  S ANSS RVYYGGA+GA+PF WES+PGTPKH  S+T+
Sbjct: 12  QKGLQIK-QDDKFFSRLMSKET-SMANSSCRVYYGGASGAVPFMWESQPGTPKHPCSDTT 71

Query: 71  IPPLTPPPSYYSS-SSHSTSKASSQPTLLSSIFPRRT-----------------LSSFSA 130
           +PPLTPPPSY+SS  S S  K S +PTLLS IFPR T                  SSFS+
Sbjct: 72  LPPLTPPPSYHSSCKSKSMQKTSMKPTLLSFIFPRLTPRKNHASPSSSRSSTSSSSSFSS 131

Query: 131 SSSSSCSSPSPFVRPKFFKRRRRHSLDSQSLPLEYNDNDNDGEEAVGSSNSPTSTLGYGG 190
            SSS   SPS     KF    +R S  S S    +N  D+D EE +G   SPTSTL +G 
Sbjct: 132 RSSSLHGSPSAPRNQKF----QRRSYFSFSRSPVHNCIDDDDEEGLG---SPTSTLCFGV 191

Query: 191 CSGRGSFLGGCYQLVSVKNALLTIVGHGS 202
                +  GGC  +V++K ALL+IV HGS
Sbjct: 192 KRRNLNEFGGCQSMVNMKKALLSIVSHGS 211

[Close]

BLAST of Cp4.1LG01g21860 vs. NCBI nr
Match: gi|720003290|ref|XP_010256943.1| (PREDICTED: uncharacterized serine-rich protein C215.13 [Nelumbo nucifera])

HSP 1 Score: 136.7 bits (343), Expect = 4.5e-29
Identity = 97/218 (44.50%), Postives = 132/218 (60.55%), Query Frame = 1


Query: 9   ISQKSLEIKHEDNRFLSRAVSNEANSAANSSFRVYYGGAAGAIPFRWESRPGTPKHTFSE 68
           + +KSL+IK +D++F +R +S E++ A +SSFRVYYGGA GA+PF WES+PGTPK+TFS+
Sbjct: 8   LPRKSLQIK-QDDKFFTRLLSKESSMANSSSFRVYYGGATGAVPFMWESQPGTPKYTFSD 67

Query: 69  TSIPPLTPPPSYYSSSSHSTSKASSQPTLLSSIFPRRTL-----------------SSFS 128
           TS+PPLTPPPSY+ +S    +K  S+  LL  IFPR +L                 SS S
Sbjct: 68  TSLPPLTPPPSYHVNSKKRPTKKPSRSNLLRIIFPRLSLRKTHASPSSSSSSSSSSSSSS 127

Query: 129 ASSSSSCSSPSPFVRPKFFKRRRRHSLDSQSLPLEYNDNDNDGEEAVGSSNSPTSTLGY- 188
           +S SSS SS +P     F +RR R      S P+   D+  D EE  G S SP STL + 
Sbjct: 128 SSWSSSLSSSTPTTSSNFLRRRSRF-----STPISSFDSSGDYEED-GGSRSPISTLCFS 187

Query: 189 --GGCSGRGSFLGGCYQLVSVKNALLTIVGHGSTTRGT 207
             G     G   G  + +V +KN  L++VGH +++RGT
Sbjct: 188 SVGRHLATGRLRGCHHSVVIMKNTFLSMVGH-TSSRGT 217

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g21860 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g21860 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K7T8_CUCSA	3.8e-67	66.52	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G014460 PE=4 SV=1	[more]
A0A061FSH6_THECC	8.9e-32	50.24	Uncharacterized protein OS=Theobroma cacao GN=TCM_045439 PE=4 SV=1	[more]
F6GXY5_VITVI	7.8e-28	48.61	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0058g01010 PE=4 SV=...	[more]
B9S4B9_RICCO	3.0e-27	42.04	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0689170 PE=4 SV=1	[more]
A0A0D2V0E7_GOSRA	3.3e-26	44.39	Uncharacterized protein OS=Gossypium raimondii GN=B456_012G015800 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g21860 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G40475.1	3.5e-19	40.82	unknown protein	[more]
AT3G56260.2	1.8e-12	39.88	unknown protein	[more]
AT5G01790.1	1.0e-10	41.32	unknown protein	[more]
AT1G06930.1	2.2e-10	40.16	unknown protein	[more]

BLAST of Cp4.1LG01g21860 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778709655\|ref\|XP_011656432.1\|	5.5e-67	66.52	PREDICTED: putative protein TPRXL [Cucumis sativus]	[more]
gi\|659113807\|ref\|XP_008456766.1\|	3.9e-65	66.96	PREDICTED: uncharacterized serine-rich protein C215.13 isoform X1 [Cucumis melo]	[more]
gi\|659113809\|ref\|XP_008456767.1\|	3.9e-65	66.96	PREDICTED: uncharacterized serine-rich protein C215.13 isoform X2 [Cucumis melo]	[more]
gi\|590570020\|ref\|XP_007011231.1\|	1.3e-31	50.24	Uncharacterized protein TCM_045439 [Theobroma cacao]	[more]
gi\|720003290\|ref\|XP_010256943.1\|	4.5e-29	44.50	PREDICTED: uncharacterized serine-rich protein C215.13 [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g21860.1	Cp4.1LG01g21860.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33257	FAMILY NOT NAMED	coord: 1..171 score: 1.9
None	No IPR available	PANTHER	PTHR33257:SF5	EXPRESSED PROTEIN	coord: 1..171 score: 1.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g21860	Cucsa.326080	Cucumber (Gy14) v1	cgycpeB0861
Cp4.1LG01g21860	CmoCh15G001710	Cucurbita moschata (Rifu)	cmocpeB279
Cp4.1LG01g21860	CmoCh03G003180	Cucurbita moschata (Rifu)	cmocpeB614
Cp4.1LG01g21860	CmoCh04G030010	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g21860	Cla012020	Watermelon (97103) v1	cpewmB445
Cp4.1LG01g21860	Cla016414	Watermelon (97103) v1	cpewmB462
Cp4.1LG01g21860	Csa6G014460	Cucumber (Chinese Long) v2	cpecuB460
Cp4.1LG01g21860	MELO3C019998	Melon (DHL92) v3.5.1	cpemeB397
Cp4.1LG01g21860	MELO3C026052	Melon (DHL92) v3.5.1	cpemeB433
Cp4.1LG01g21860	ClCG11G005770	Watermelon (Charleston Gray)	cpewcgB355
Cp4.1LG01g21860	ClCG04G006490	Watermelon (Charleston Gray)	cpewcgB383
Cp4.1LG01g21860	CSPI06G02050	Wild cucumber (PI 183967)	cpecpiB461
Cp4.1LG01g21860	CSPI04G16420	Wild cucumber (PI 183967)	cpecpiB412
Cp4.1LG01g21860	Lsi03G002730	Bottle gourd (USVL1VR-Ls)	cpelsiB339
Cp4.1LG01g21860	Lsi01G016020	Bottle gourd (USVL1VR-Ls)	cpelsiB328
Cp4.1LG01g21860	MELO3C019998.2	Melon (DHL92) v3.6.1	cpemedB462
Cp4.1LG01g21860	CsaV3_6G002200	Cucumber (Chinese Long) v3	cpecucB0569
Cp4.1LG01g21860	Bhi04G001846	Wax gourd	cpewgoB0525
Cp4.1LG01g21860	CsGy6G002130	Cucumber (Gy14) v2	cgybcpeB798
Cp4.1LG01g21860	Carg02150	Silver-seed gourd	carcpeB0374
Cp4.1LG01g21860	Carg19503	Silver-seed gourd	carcpeB0892
Cp4.1LG01g21860	Carg05947	Silver-seed gourd	carcpeB0034

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG01g21860	Cp4.1LG13g07630	Cucurbita pepo (Zucchini)	cpecpeB199

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g21860	Wax gourd	cpewgoB0546
Cp4.1LG01g21860	Cucurbita pepo (Zucchini)	cpecpeB074
Cp4.1LG01g21860	Cucurbita pepo (Zucchini)	cpecpeB376
Cp4.1LG01g21860	Cucumber (Gy14) v1	cgycpeB0344
Cp4.1LG01g21860	Cucurbita maxima (Rimu)	cmacpeB317
Cp4.1LG01g21860	Cucurbita maxima (Rimu)	cmacpeB721
Cp4.1LG01g21860	Cucumber (Chinese Long) v2	cpecuB413
Cp4.1LG01g21860	Cucumber (Gy14) v2	cgybcpeB514
Cp4.1LG01g21860	Melon (DHL92) v3.6.1	cpemedB505
Cp4.1LG01g21860	Cucumber (Chinese Long) v3	cpecucB0509