Carg02150 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg02150
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Alkylated DNA repair protein
Location	Cucurbita_argyrosperma_scaffold_007 : 291455 .. 292060 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCTGGAAACTACCACCAAGTCTCTCTCAAGGAGGCTAACTCCGCCGCCAACTCCTCTTTCAGAGTCTATTACGGCGGCGCCACCGGTGCCATTCCGTTCAGATGGGAGTCACGCCCAGGCACTCCTAAGCATACTTATTCAGACACCTCTATCCCTCCTCTTACTCCTCCTCCTTCTTACTATTCCTCTTCCCATTCTACTTCCAAAGCCTCTCCTAAGCCGACACGTTTCACTTCAATTTTTAGGAAATCTCGAACCGCCTCGTCTTTCTCCTTCTCCTCCTCGTCGTCGTCGTCCTCCTCCTTCGCATCATGGTCTTCCTCTCGCTCGTCGCCCTCCGCTTTCGTTAGACCTAAATTCTTCAAACATCGTCGCTGCTTCTCGAATTCTCCAAGCTTGCCATTCGAGTGTAGCTTCGACGACAACGAGGGCGACGAGGCGGTGGGGAGCCCCGATTCTCCTACGTCGACTTTGTGCTTTGGTGGTGGCTCTTCTTCACGTAGAGCTTCATTGTTCCGAGGTTGTTACCGGTTAGTGAGTGTGAAGAACGCTTTGTTGTCCATTGTCGGACATGGATCTGCAAGCCGAGGTACTCATTAA

mRNA sequence

ATGGAAGCTGGAAACTACCACCAAGTCTCTCTCAAGGAGGCTAACTCCGCCGCCAACTCCTCTTTCAGAGTCTATTACGGCGGCGCCACCGGTGCCATTCCGTTCAGATGGGAGTCACGCCCAGGCACTCCTAAGCATACTTATTCAGACACCTCTATCCCTCCTCTTACTCCTCCTCCTTCTTACTATTCCTCTTCCCATTCTACTTCCAAAGCCTCTCCTAAGCCGACACGTTTCACTTCAATTTTTAGGAAATCTCGAACCGCCTCGTCTTTCTCCTTCTCCTCCTCGTCGTCGTCGTCCTCCTCCTTCGCATCATGGTCTTCCTCTCGCTCGTCGCCCTCCGCTTTCGTTAGACCTAAATTCTTCAAACATCGTCGCTGCTTCTCGAATTCTCCAAGCTTGCCATTCGAGTGTAGCTTCGACGACAACGAGGGCGACGAGGCGGTGGGGAGCCCCGATTCTCCTACGTCGACTTTGTGCTTTGGTGGTGGCTCTTCTTCACGTAGAGCTTCATTGTTCCGAGGTTGTTACCGGTTAGTGAGTGTGAAGAACGCTTTGTTGTCCATTGTCGGACATGGATCTGCAAGCCGAGGTACTCATTAA

Coding sequence (CDS)

ATGGAAGCTGGAAACTACCACCAAGTCTCTCTCAAGGAGGCTAACTCCGCCGCCAACTCCTCTTTCAGAGTCTATTACGGCGGCGCCACCGGTGCCATTCCGTTCAGATGGGAGTCACGCCCAGGCACTCCTAAGCATACTTATTCAGACACCTCTATCCCTCCTCTTACTCCTCCTCCTTCTTACTATTCCTCTTCCCATTCTACTTCCAAAGCCTCTCCTAAGCCGACACGTTTCACTTCAATTTTTAGGAAATCTCGAACCGCCTCGTCTTTCTCCTTCTCCTCCTCGTCGTCGTCGTCCTCCTCCTTCGCATCATGGTCTTCCTCTCGCTCGTCGCCCTCCGCTTTCGTTAGACCTAAATTCTTCAAACATCGTCGCTGCTTCTCGAATTCTCCAAGCTTGCCATTCGAGTGTAGCTTCGACGACAACGAGGGCGACGAGGCGGTGGGGAGCCCCGATTCTCCTACGTCGACTTTGTGCTTTGGTGGTGGCTCTTCTTCACGTAGAGCTTCATTGTTCCGAGGTTGTTACCGGTTAGTGAGTGTGAAGAACGCTTTGTTGTCCATTGTCGGACATGGATCTGCAAGCCGAGGTACTCATTAA

Protein sequence

MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPPSYYSSSHSTSKASPKPTRFTSIFRKSRTASSFSFSSSSSSSSSFASWSSSRSSPSAFVRPKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYRLVSVKNALLSIVGHGSASRGTH

Homology

[Close]

BLAST of Carg02150 vs. NCBI nr
Match: XP_022939362.1 (uncharacterized serine-rich protein C215.13-like [Cucurbita moschata])

HSP 1 Score: 339.3 bits (869), Expect = 8.6e-90
Identity = 200/201 (99.50%), Postives = 200/201 (99.50%), Query Frame = 0


Query: 1   MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60
           MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP
Sbjct: 1   MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60

Query: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVRP 120
           SYYSSSHSTSK SPKPTRFTSIFRKSRTXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVRP
Sbjct: 61  SYYSSSHSTSKVSPKPTRFTSIFRKSRTXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVRP 120

Query: 121 KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYRL 180
           KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYRL
Sbjct: 121 KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYRL 180

Query: 181 VSVKNALLSIVGHGSASRGTH 202
           VSVKNALLSIVGHGSASRGTH
Sbjct: 181 VSVKNALLSIVGHGSASRGTH 201

[Close]

BLAST of Carg02150 vs. NCBI nr
Match: XP_023551135.1 (putative protein TPRXL [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.2 bits (840), Expect = 2.0e-86
Identity = 194/201 (96.52%), Postives = 196/201 (97.51%), Query Frame = 0


Query: 1   MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60
           MEAGNYHQ+SLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP
Sbjct: 1   MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60

Query: 61  SYYSSSHSTSKASPKPTRFTSIFRKSRTXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVRP 120
           SYYSSSHSTSKASPKPTRFTSIFRKS    XXXXXXXXXXXXXXXXXXXXXXXXXAFVRP
Sbjct: 61  SYYSSSHSTSKASPKPTRFTSIFRKS----XXXXXXXXXXXXXXXXXXXXXXXXXAFVRP 120

Query: 121 KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYRL 180
           KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCY+L
Sbjct: 121 KFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQL 180

Query: 181 VSVKNALLSIVGHGSASRGTH 202
           VSVK ALLSIVGHGSASRGTH
Sbjct: 181 VSVKKALLSIVGHGSASRGTH 197

[Close]

BLAST of Carg02150 vs. NCBI nr
Match: XP_022993995.1 (uncharacterized serine-rich protein C215.13-like [Cucurbita maxima])

HSP 1 Score: 307.0 bits (785), Expect = 4.8e-80
Identity = 186/202 (92.08%), Postives = 188/202 (93.07%), Query Frame = 0


Query: 1   MEAGNYHQVSLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60
           MEAGNYHQ+SLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP
Sbjct: 1   MEAGNYHQISLKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPP 60

Query: 61  SYYSSSHSTSKASPKPTRFTSIFRKS-RTXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVR 120
           SYYS          KPTRFTSIFRKS   XXXXXXXXXXXXXXXXXXXXXXXXXX AFVR
Sbjct: 61  SYYSXXXXXXXXXXKPTRFTSIFRKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAFVR 120

Query: 121 PKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYR 180
           PKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCY+
Sbjct: 121 PKFFKHRRCFSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFRGCYQ 180

Query: 181 LVSVKNALLSIVGHGSASRGTH 202
           LVSVKNALLSIVGHGSASRGTH
Sbjct: 181 LVSVKNALLSIVGHGSASRGTH 202

[Close]

BLAST of Carg02150 vs. NCBI nr
Match: XP_011656432.1 (PREDICTED: putative protein TPRXL [Cucumis sativus] >KGN45825.1 hypothetical protein Csa_6G014460 [Cucumis sativus])

HSP 1 Score: 179.9 bits (455), Expect = 8.8e-42
Identity = 138/201 (68.66%), Postives = 144/201 (71.64%), Query Frame = 0


Query: 12  KEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLT----------PPPS 71
           KE NS  NSSFRVYYGGATGAIPFRWESRPGTPKHT+SDTSIPPLT              
Sbjct: 30  KELNSTTNSSFRVYYGGATGAIPFRWESRPGTPKHTFSDTSIPPLTXXXXXXXXXXXXXX 89

Query: 72  YYSSSHSTSKASPKPTRFTSIFRKSRTXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVRPK 131
                                      XXXXXXXXXXXXXXXXXXXXXXXXXXX FVRPK
Sbjct: 90  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVRPK 149

Query: 132 FFKHRRCFSNSPSLPFECSFDDNEGDEAV--GSPDSPTSTLCFGGGSSSRRASLFRGCYR 191
           FFK RR FS+ PSLPFE SFDD +GDE V   +P+SPTS LCFGGGSSS RASLF GCY+
Sbjct: 150 FFKRRRRFSDIPSLPFEYSFDDKDGDEVVAGSAPNSPTSILCFGGGSSS-RASLFGGCYQ 209

Query: 192 LVSVKNALLSIVGHGSASRGT 201
           LVSVKNALLSIVGHGSASRGT
Sbjct: 210 LVSVKNALLSIVGHGSASRGT 229

[Close]

BLAST of Carg02150 vs. NCBI nr
Match: XP_016901982.1 (PREDICTED: putative uncharacterized protein DDB_G0277255 [Cucumis melo])

HSP 1 Score: 177.2 bits (448), Expect = 5.7e-41
Identity = 137/202 (67.82%), Postives = 143/202 (70.79%), Query Frame = 0


Query: 12  KEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLT----------PPPS 71
           KE NS  NSSFRVYYGGATGAIPFRWESRPGTPKHT+SDTSIPPLT              
Sbjct: 30  KELNSTTNSSFRVYYGGATGAIPFRWESRPGTPKHTFSDTSIPPLTXXXXXXXXXXXXXX 89

Query: 72  YYSSSHSTSKASPKPTRFTSIFRKSRTXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVRPK 131
                                      XXXXXXXXXXXXXXXXXXXXXXXXXXX FVRPK
Sbjct: 90  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVRPK 149

Query: 132 FFKHRRCFSNSPSLPFECSFDDNEGDEAVG---SPDSPTSTLCFGGGSSSRRASLFRGCY 191
           FFK RR FS+ PSLPFE SFDD +GDE V    +P+SPTS LCFGGGSSS RASLF GCY
Sbjct: 150 FFKRRRHFSDIPSLPFEYSFDDKDGDEVVAGSTAPNSPTSILCFGGGSSS-RASLFGGCY 209

Query: 192 RLVSVKNALLSIVGHGSASRGT 201
           +LVSVK ALLSIVGHGSASRGT
Sbjct: 210 QLVSVKKALLSIVGHGSASRGT 230

[Close]

BLAST of Carg02150 vs. TAIR10
Match: AT5G01790.1 (unknown protein)

HSP 1 Score: 65.1 bits (157), Expect = 5.7e-11
Identity = 37/66 (56.06%), Postives = 46/66 (69.70%), Query Frame = 0


Query: 16  SAANSSFRV-YYGGATGAIPFRWESRPGTPKHTYSD-TSIPPLTPPPSYYS-SSHSTSKA 75
           SAA  SFR+ YY GA GA+PF WES PGTPKH  S+  ++PPLTPPPS++S S     + 
Sbjct: 57  SAACPSFRIYYYDGAAGAVPFEWESHPGTPKHPSSELPTLPPLTPPPSHFSFSGDQIRRR 116

Query: 76  SPKPTR 79
           S K T+
Sbjct: 117 SKKSTK 122

[Close]

BLAST of Carg02150 vs. TAIR10
Match: AT1G06930.1 (unknown protein)

HSP 1 Score: 59.7 bits (143), Expect = 2.4e-09
Identity = 37/81 (45.68%), Postives = 51/81 (62.96%), Query Frame = 0


Query: 25  YYGGATGAIPFRWESRPGTPK-----------HTYSDTSIP---PLTPPPSY-YSSSHST 84
           YYGG++ A+PF+WES+PGTP+           ++ SD + P   PLTPPPSY Y+S  ST
Sbjct: 24  YYGGSSAAVPFKWESQPGTPRRLSKRSSSSGFNSDSDFNFPVSAPLTPPPSYFYASPSST 83

Query: 85  SKASPKPTR--FTSIFRKSRT 89
              SPK T   F+S+  K+R+
Sbjct: 84  KHVSPKKTNTLFSSLLSKNRS 104

[Close]

BLAST of Carg02150 vs. TAIR10
Match: AT3G56260.2 (unknown protein)

HSP 1 Score: 59.3 bits (142), Expect = 3.1e-09
Identity = 38/64 (59.38%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 25 YYGGATGAIPFRWESRPGTPK-HTYSDTSIP-PLTPPPSYYSSS-----HSTSKASPKPT 82
          YYGGA  +IPF WESRPGTPK H  SD+S+P PLTPPPSYYSS       + SK   K +
Sbjct: 18 YYGGA--SIPFIWESRPGTPKNHLCSDSSLPLPLTPPPSYYSSGILSTPRTQSKVRSKLS 77

[Close]

BLAST of Carg02150 vs. TrEMBL
Match: tr|A0A0A0K7T8|A0A0A0K7T8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014460 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.8e-42
Identity = 138/201 (68.66%), Postives = 144/201 (71.64%), Query Frame = 0


Query: 12  KEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLT----------PPPS 71
           KE NS  NSSFRVYYGGATGAIPFRWESRPGTPKHT+SDTSIPPLT              
Sbjct: 30  KELNSTTNSSFRVYYGGATGAIPFRWESRPGTPKHTFSDTSIPPLTXXXXXXXXXXXXXX 89

Query: 72  YYSSSHSTSKASPKPTRFTSIFRKSRTXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVRPK 131
                                      XXXXXXXXXXXXXXXXXXXXXXXXXXX FVRPK
Sbjct: 90  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVRPK 149

Query: 132 FFKHRRCFSNSPSLPFECSFDDNEGDEAV--GSPDSPTSTLCFGGGSSSRRASLFRGCYR 191
           FFK RR FS+ PSLPFE SFDD +GDE V   +P+SPTS LCFGGGSSS RASLF GCY+
Sbjct: 150 FFKRRRRFSDIPSLPFEYSFDDKDGDEVVAGSAPNSPTSILCFGGGSSS-RASLFGGCYQ 209

Query: 192 LVSVKNALLSIVGHGSASRGT 201
           LVSVKNALLSIVGHGSASRGT
Sbjct: 210 LVSVKNALLSIVGHGSASRGT 229

[Close]

BLAST of Carg02150 vs. TrEMBL
Match: tr|A0A1S4E178|A0A1S4E178_CUCME (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103496610 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 3.8e-41
Identity = 137/202 (67.82%), Postives = 143/202 (70.79%), Query Frame = 0


Query: 12  KEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLT----------PPPS 71
           KE NS  NSSFRVYYGGATGAIPFRWESRPGTPKHT+SDTSIPPLT              
Sbjct: 30  KELNSTTNSSFRVYYGGATGAIPFRWESRPGTPKHTFSDTSIPPLTXXXXXXXXXXXXXX 89

Query: 72  YYSSSHSTSKASPKPTRFTSIFRKSRTXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVRPK 131
                                      XXXXXXXXXXXXXXXXXXXXXXXXXXX FVRPK
Sbjct: 90  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFVRPK 149

Query: 132 FFKHRRCFSNSPSLPFECSFDDNEGDEAVG---SPDSPTSTLCFGGGSSSRRASLFRGCY 191
           FFK RR FS+ PSLPFE SFDD +GDE V    +P+SPTS LCFGGGSSS RASLF GCY
Sbjct: 150 FFKRRRHFSDIPSLPFEYSFDDKDGDEVVAGSTAPNSPTSILCFGGGSSS-RASLFGGCY 209

Query: 192 RLVSVKNALLSIVGHGSASRGT 201
           +LVSVK ALLSIVGHGSASRGT
Sbjct: 210 QLVSVKKALLSIVGHGSASRGT 230

[Close]

BLAST of Carg02150 vs. TrEMBL
Match: tr|A0A2G5EQN6|A0A2G5EQN6_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_00500167v1 PE=4 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.6e-23
Identity = 103/195 (52.82%), Postives = 119/195 (61.03%), Query Frame = 0


Query: 12  KEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPPSYYSSSHSTSK 71
           KEAN   NSSFRVYYGGA+GA+PF WESRPGTPK+ Y DTS+PPLTPPPSY S+S     
Sbjct: 29  KEAN-LTNSSFRVYYGGASGAVPFVWESRPGTPKNKYCDTSLPPLTPPPSYQSNS-KRDF 88

Query: 72  ASPKPTRFT---SIFRKSRTXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVRPKFFKHRRC 131
           ++ KP++F    +IF K            XXXXXXXXXXXXXXXXXX          RR 
Sbjct: 89  SNKKPSKFKLIHTIFPKLNVKKSHVSPTSXXXXXXXXXXXXXXXXXXXXXXXXXXHRRRA 148

Query: 132 FSNSPSLPFECSFDDNEGDEAVGSPDSPTSTLCFG--GGSSSRRASLFRGCYRLVSVKNA 191
            S S       SFD    ++   S  SPTSTLCF   G   +     F+GCY +V +KNA
Sbjct: 149 SSLS-------SFDSRAYNDEEPSLGSPTSTLCFAFHGDRETSSTGGFKGCYSMVFMKNA 208

Query: 192 LLSIVGHGSAS-RGT 201
           L SIVGHGS   RGT
Sbjct: 209 LSSIVGHGSGDHRGT 214

[Close]

BLAST of Carg02150 vs. TrEMBL
Match: tr|A0A1U8LWR6|A0A1U8LWR6_GOSHI (uncharacterized protein LOC107931546 OS=Gossypium hirsutum OX=3635 GN=LOC107931546 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.7e-23
Identity = 105/200 (52.50%), Postives = 124/200 (62.00%), Query Frame = 0


Query: 11  LKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPPSYYSSSHSTS 70
           + +  S ANSS RVYYGGA+GA+PF WES PGTPKH   DT+IPPLTPPPSYYSS +S S
Sbjct: 29  MSKETSMANSSCRVYYGGASGAVPFMWESHPGTPKHPSCDTAIPPLTPPPSYYSSFNSKS 88

Query: 71  KASP--KPTRFTSIF------RKSRTXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVRPKF 130
           K +   K T   SIF      RKS+ XXXXXXXXXXXXXXXXXXXXXXX    +   PK 
Sbjct: 89  KQTKGLKSTLLNSIFPRLITARKSQAXXXXXXXXXXXXXXXXXXXXXXXHDAGSSPLPKS 148

Query: 131 FKHRRCFSNSPSLPFECS-------FDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFR 190
             +R+ F    S  F CS        D            SPTSTLCF  G   R  ++F+
Sbjct: 149 SINRKLFHRQMSY-FSCSRSPVHSCMDXXXXXXXNEGLGSPTSTLCF--GVKPRNLNVFK 208

Query: 191 GCYRLVSVKNALLSIVGHGS 196
           GC  ++++K ALLS+V HGS
Sbjct: 209 GCQSMINMKKALLSMVSHGS 225

[Close]

BLAST of Carg02150 vs. TrEMBL
Match: tr|A0A0D2V0E7|A0A0D2V0E7_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G015800 PE=4 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 2.7e-23
Identity = 105/200 (52.50%), Postives = 124/200 (62.00%), Query Frame = 0


Query: 11  LKEANSAANSSFRVYYGGATGAIPFRWESRPGTPKHTYSDTSIPPLTPPPSYYSSSHSTS 70
           + +  S ANSS RVYYGGA+GA+PF WES PGTPKH   DT+IPPLTPPPSYYSS +S S
Sbjct: 29  MSKETSMANSSCRVYYGGASGAVPFMWESHPGTPKHPSCDTAIPPLTPPPSYYSSFNSKS 88

Query: 71  KASP--KPTRFTSIF------RKSRTXXXXXXXXXXXXXXXXXXXXXXXXXXXAFVRPKF 130
           K +   K T   SIF      RKS+ XXXXXXXXXXXXXXXXXXXXXXX    +   PK 
Sbjct: 89  KQTKGLKSTLLNSIFPRLITARKSQAXXXXXXXXXXXXXXXXXXXXXXXHDAGSSPLPKS 148

Query: 131 FKHRRCFSNSPSLPFECS-------FDDNEGDEAVGSPDSPTSTLCFGGGSSSRRASLFR 190
             +R+ F    S  F CS        D            SPTSTLCF  G   R  ++F+
Sbjct: 149 SINRKLFHRQMSY-FSCSRSPVHSCMDXXXXXXXNEGLGSPTSTLCF--GVKPRNLNVFK 208

Query: 191 GCYRLVSVKNALLSIVGHGS 196
           GC  ++++K ALLS+V HGS
Sbjct: 209 GCQSMINMKKALLSMVSHGS 225

The following BLAST results are available for this feature:

BLAST of Carg02150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939362.1	8.6e-90	99.50	uncharacterized serine-rich protein C215.13-like [Cucurbita moschata]	[more]
XP_023551135.1	2.0e-86	96.52	putative protein TPRXL [Cucurbita pepo subsp. pepo]	[more]
XP_022993995.1	4.8e-80	92.08	uncharacterized serine-rich protein C215.13-like [Cucurbita maxima]	[more]
XP_011656432.1	8.8e-42	68.66	PREDICTED: putative protein TPRXL [Cucumis sativus] >KGN45825.1 hypothetical pro...	[more]
XP_016901982.1	5.7e-41	67.82	PREDICTED: putative uncharacterized protein DDB_G0277255 [Cucumis melo]	[more]

BLAST of Carg02150 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G01790.1	5.7e-11	56.06	unknown protein	[more]
AT1G06930.1	2.4e-09	45.68	unknown protein	[more]
AT3G56260.2	3.1e-09	59.38	unknown protein	[more]

BLAST of Carg02150 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg02150 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K7T8\|A0A0A0K7T8_CUCSA	5.8e-42	68.66	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G014460 PE=4 SV=1	[more]
tr\|A0A1S4E178\|A0A1S4E178_CUCME	3.8e-41	67.82	Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC103496610 PE=4 SV=1	[more]
tr\|A0A2G5EQN6\|A0A2G5EQN6_AQUCA	1.6e-23	52.82	Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_00500167v1 PE=4...	[more]
tr\|A0A1U8LWR6\|A0A1U8LWR6_GOSHI	2.7e-23	52.50	uncharacterized protein LOC107931546 OS=Gossypium hirsutum OX=3635 GN=LOC1079315...	[more]
tr\|A0A0D2V0E7\|A0A0D2V0E7_GOSRA	2.7e-23	52.50	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_012G015800 PE=4 ...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg02150-RA	Carg02150-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 92..114
None	No IPR available	PANTHER	PTHR33257	FAMILY NOT NAMED	coord: 11..177
None	No IPR available	PANTHER	PTHR33257:SF17	EXPRESSED PROTEIN	coord: 11..177

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg02150	Cla016414	Watermelon (97103) v1	carwmB0260
Carg02150	Csa6G014460	Cucumber (Chinese Long) v2	carcuB0297
Carg02150	MELO3C019998	Melon (DHL92) v3.5.1	carmeB0269
Carg02150	ClCG11G005770	Watermelon (Charleston Gray)	carwcgB0255
Carg02150	CSPI06G02050	Wild cucumber (PI 183967)	carcpiB0301
Carg02150	Cucsa.326080	Cucumber (Gy14) v1	carcgyB0319
Carg02150	CmoCh15G001710	Cucurbita moschata (Rifu)	carcmoB0362
Carg02150	CmoCh04G030010	Cucurbita moschata (Rifu)	carcmoB0370
Carg02150	Lsi03G002730	Bottle gourd (USVL1VR-Ls)	carlsiB236
Carg02150	Cp4.1LG13g07630	Cucurbita pepo (Zucchini)	carcpeB0366
Carg02150	Cp4.1LG01g21860	Cucurbita pepo (Zucchini)	carcpeB0374
Carg02150	CsGy6G002130	Cucumber (Gy14) v2	carcgybB0284
Carg02150	MELO3C019998.2	Melon (DHL92) v3.6.1	carmedB0280
Carg02150	CsaV3_6G002200	Cucumber (Chinese Long) v3	carcucB0300
Carg02150	Cla97C11G212690	Watermelon (97103) v2	carwmbB0269
Carg02150	Bhi04G001846	Wax gourd	carwgoB0349

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg02150	Carg05947	Silver-seed gourd	carcarB020

The following block(s) are covering this gene:


Gene	Organism	Block
Carg02150	Silver-seed gourd	carcarB305
Carg02150	Cucumber (Gy14) v2	carcgybB0277
Carg02150	Cucumber (Gy14) v1	carcgyB0306
Carg02150	Cucurbita maxima (Rimu)	carcmaB0362
Carg02150	Cucurbita maxima (Rimu)	carcmaB0366
Carg02150	Cucurbita maxima (Rimu)	carcmaB0374
Carg02150	Cucurbita maxima (Rimu)	carcmaB0375
Carg02150	Cucurbita moschata (Rifu)	carcmoB0363
Carg02150	Cucurbita moschata (Rifu)	carcmoB0373
Carg02150	Cucurbita pepo (Zucchini)	carcpeB0365
Carg02150	Wild cucumber (PI 183967)	carcpiB0294
Carg02150	Cucumber (Chinese Long) v2	carcuB0290
Carg02150	Cucumber (Chinese Long) v3	carcucB0293
Carg02150	Bottle gourd (USVL1VR-Ls)	carlsiB231
Carg02150	Bottle gourd (USVL1VR-Ls)	carlsiB242
Carg02150	Melon (DHL92) v3.6.1	carmedB0285
Carg02150	Watermelon (Charleston Gray)	carwcgB0257
Carg02150	Watermelon (Charleston Gray)	carwcgB0260
Carg02150	Watermelon (97103) v1	carwmB0254
Carg02150	Watermelon (97103) v1	carwmB0259
Carg02150	Watermelon (97103) v2	carwmbB0272
Carg02150	Watermelon (97103) v2	carwmbB0276
Carg02150	Wax gourd	carwgoB0351