Cp4.1LG01g21850 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g21850
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionLOB domain-containing protein, putative
LocationCp4.1LG01 : 20588619 .. 20589134 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGGGTGCCATGATACTCGTTCTTCTTCTTCTTGTGCAGCCTGCAAATTGCTGAAAAGAAGATGCACGCCCACTTGCATATTTGCGCCTTATTTTAGGTCTGATGAGCCGAAGAAGTTCGCCAAGGTTCACAAAGTGTTTGGGGCGAGTAATGTGAGCAAGATTCTGACGGAGGTGCCTGAGGAGCAGAGAGAGGACACTGTGAACTCTTTGGCTTATGAGGCGGAGGCTAGGCTGAGAGATCCTGTTTATGGATGCATCGGTGCCATAGCTTTGTTGCAGACTAAAATGGCGGAGCTTCAACATGATCTTGCTCTTGCCAAAGCTCGCCTAGCTCGTTATGCTGCTGCTAATAATAATTATTCTTCTTCTACTTCTTTGGGTGTTTTGGAAAATTGTGTTGTTAATATGTCTTATGGTGGATTGAGTTTCTCTGGGCAGAGTTCTGATGATATCTCCCAATATGGTTATTTATGTGACTTTACCCATTTTCCATATCCATTTCAAGCTTGA

mRNA sequence

ATGAGAGGGTGCCATGATACTCGTTCTTCTTCTTCTTGTGCAGCCTGCAAATTGCTGAAAAGAAGATGCACGCCCACTTGCATATTTGCGCCTTATTTTAGGTCTGATGAGCCGAAGAAGTTCGCCAAGGTTCACAAAGTGTTTGGGGCGAGTAATGTGAGCAAGATTCTGACGGAGGTGCCTGAGGAGCAGAGAGAGGACACTGTGAACTCTTTGGCTTATGAGGCGGAGGCTAGGCTGAGAGATCCTGTTTATGGATGCATCGGTGCCATAGCTTTGTTGCAGACTAAAATGGCGGAGCTTCAACATGATCTTGCTCTTGCCAAAGCTCGCCTAGCTCGTTATGCTGCTGCTAATAATAATTATTCTTCTTCTACTTCTTTGGGTGTTTTGGAAAATTGTGTTGTTAATATGTCTTATGGTGGATTGAGTTTCTCTGGGCAGAGTTCTGATGATATCTCCCAATATGGTTATTTATGTGACTTTACCCATTTTCCATATCCATTTCAAGCTTGA

Coding sequence (CDS)

ATGAGAGGGTGCCATGATACTCGTTCTTCTTCTTCTTGTGCAGCCTGCAAATTGCTGAAAAGAAGATGCACGCCCACTTGCATATTTGCGCCTTATTTTAGGTCTGATGAGCCGAAGAAGTTCGCCAAGGTTCACAAAGTGTTTGGGGCGAGTAATGTGAGCAAGATTCTGACGGAGGTGCCTGAGGAGCAGAGAGAGGACACTGTGAACTCTTTGGCTTATGAGGCGGAGGCTAGGCTGAGAGATCCTGTTTATGGATGCATCGGTGCCATAGCTTTGTTGCAGACTAAAATGGCGGAGCTTCAACATGATCTTGCTCTTGCCAAAGCTCGCCTAGCTCGTTATGCTGCTGCTAATAATAATTATTCTTCTTCTACTTCTTTGGGTGTTTTGGAAAATTGTGTTGTTAATATGTCTTATGGTGGATTGAGTTTCTCTGGGCAGAGTTCTGATGATATCTCCCAATATGGTTATTTATGTGACTTTACCCATTTTCCATATCCATTTCAAGCTTGA

Protein sequence

MRGCHDTRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARYAAANNNYSSSTSLGVLENCVVNMSYGGLSFSGQSSDDISQYGYLCDFTHFPYPFQA
Homology
[Close]
BLAST of Cp4.1LG01g21850 vs. Swiss-Prot
Match: LBD21_ARATH (LOB domain-containing protein 21 OS=Arabidopsis thaliana GN=LBD21 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.6e-46
Identity = 95/124 (76.61%), Postives = 106/124 (85.48%), Query Frame = 1 

Query: 1   MRGCHDTRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60
           MRG H+ RSSSSCAACKLLKRRCTPTCIFAPYFRS +   FAKVHKVFGASNVSK+L EV
Sbjct: 1   MRG-HEPRSSSSCAACKLLKRRCTPTCIFAPYFRSSDLITFAKVHKVFGASNVSKLLGEV 60

Query: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARYAAANN 120
           PEEQR++TVNSLAYEAE RL+DPVYGCIGAIA LQ KM ELQHDLA+A+ RL  ++  NN
Sbjct: 61  PEEQRQETVNSLAYEAEVRLKDPVYGCIGAIASLQKKMLELQHDLAVARTRLLAHSGVNN 120

Query: 121 NYSS 125
           +  S
Sbjct: 121 SQVS 123

[Close]
BLAST of Cp4.1LG01g21850 vs. Swiss-Prot
Match: LBD6_ARATH (LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.7e-35
Identity = 71/122 (58.20%), Postives = 95/122 (77.87%), Query Frame = 1 

Query: 9   SSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 68
           ++S CAACK L+R+C P C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 6   TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDA 65

Query: 69  VNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARYAAANNNYSSSTSL 128
           VNSLAYEA+ RLRDPVYGC+G I+LLQ ++ +LQ DL+ AK+ L++Y +     ++  SL
Sbjct: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAATHQSL 125

Query: 129 GV 131
           G+
Sbjct: 126 GI 127

[Close]
BLAST of Cp4.1LG01g21850 vs. Swiss-Prot
Match: LBD36_ARATH (LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 7.7e-35
Identity = 70/107 (65.42%), Postives = 85/107 (79.44%), Query Frame = 1 

Query: 9   SSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 68
           SSS CAACK L+R+CT  C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 4   SSSPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDA 63

Query: 69  VNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARY 116
           VNSL YEAEARLRDPVYGC+G I++LQ ++ ++ HDL  AK  LA Y
Sbjct: 64  VNSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATY 110

[Close]
BLAST of Cp4.1LG01g21850 vs. Swiss-Prot
Match: LBD25_ARATH (LOB domain-containing protein 25 OS=Arabidopsis thaliana GN=LBD25 PE=2 SV=3)

HSP 1 Score: 145.2 bits (365), Expect = 6.6e-34
Identity = 71/117 (60.68%), Postives = 88/117 (75.21%), Query Frame = 1 

Query: 9   SSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 68
           ++S CAACK L+R+CT  C+FAPYF  +EP KFA VH++FGASNVSKIL EV   QRED 
Sbjct: 36  TNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDA 95

Query: 69  VNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARYAAANNNYSSS 126
           VNSLAYEAEARL+DPVYGC+GAI++LQ ++  LQ +L    A L RYA      ++S
Sbjct: 96  VNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYAGCLGGETTS 152

[Close]
BLAST of Cp4.1LG01g21850 vs. Swiss-Prot
Match: LBD6_MAIZE (LOB domain-containing protein 6 OS=Zea mays GN=LBD6 PE=1 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.1e-33
Identity = 70/121 (57.85%), Postives = 89/121 (73.55%), Query Frame = 1 

Query: 9   SSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 68
           + S CAACK L+R+C P C+FAPYF  D P+KF  VH+VFGASNV+K+L E+   QRED 
Sbjct: 30  TGSPCAACKFLRRKCQPDCVFAPYFPPDNPQKFVHVHRVFGASNVTKLLNELHPFQREDA 89

Query: 69  VNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARYAAANNNYSSSTSL 128
           VNSLAYEA+ RLRDPVYGC+G I++LQ  + +LQ DLA AK  L++Y AA    +S+   
Sbjct: 90  VNSLAYEADMRLRDPVYGCVGVISILQHNLRQLQQDLARAKYELSKYQAAAAASASTAPT 149

Query: 129 G 130
           G
Sbjct: 150 G 150

[Close]
BLAST of Cp4.1LG01g21850 vs. TrEMBL
Match: A0A0A0KAD8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G012240 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 4.1e-59
Identity = 123/139 (88.49%), Postives = 128/139 (92.09%), Query Frame = 1 

Query: 35  SDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALL 94
           SDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALL
Sbjct: 6   SDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALL 65

Query: 95  QTKMAELQHDLALAKARLARYAAANNNYSSSTSLGVLENCVVNMSYGGLSFSGQ--SSDD 154
           QTKM ELQHDLALAKARLARY A NN  SSS+S   +ENCVVNMSYGGLSFS +  SSDD
Sbjct: 66  QTKMVELQHDLALAKARLARY-ANNNTSSSSSSSSCVENCVVNMSYGGLSFSAEQSSSDD 125

Query: 155 ISQYGYLCDFTHFPYPFQA 172
           I+QYGYLCDFTHFPYPF+A
Sbjct: 126 ITQYGYLCDFTHFPYPFKA 143

[Close]
BLAST of Cp4.1LG01g21850 vs. TrEMBL
Match: B9SQQ2_RICCO (LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_0839580 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 5.7e-53
Identity = 117/174 (67.24%), Postives = 139/174 (79.89%), Query Frame = 1 

Query: 5   HDTRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQ 64
           ++ RSSSSCAACK LKRRC P CIFAPYFRSDEPKKFA+VHK+FGASNVSKIL EVPEEQ
Sbjct: 4   NEPRSSSSCAACKFLKRRCIPNCIFAPYFRSDEPKKFARVHKIFGASNVSKILIEVPEEQ 63

Query: 65  REDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARYAAANNNYSS 124
           REDTVNSLAYEAEARLRDPVYGCIGAIALLQ KM ELQ DLA+AKARLARY A ++++SS
Sbjct: 64  REDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMVELQVDLAIAKARLARYTAISSSFSS 123

Query: 125 STSLGVLENCVVNMSY------GGL---SFSGQSSDDISQYGYLCDFTHFPYPF 170
           +++  +L +     ++      GG+   SFS Q+S ++SQ   + DF+ FPY F
Sbjct: 124 ASTASILSDRSSLAAFNEFPACGGMVVDSFS-QTSSELSQDRVVNDFSQFPYIF 176

[Close]
BLAST of Cp4.1LG01g21850 vs. TrEMBL
Match: A0A059BI25_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G03078 PE=4 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 5.7e-53
Identity = 123/175 (70.29%), Postives = 138/175 (78.86%), Query Frame = 1 

Query: 1   MRGCHDTRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60
           M+G H+ RSSSSCAACKLLKR+CT TCIFAPYFRSDEPKKFAKVHKVFGASNVSKIL EV
Sbjct: 10  MKG-HEPRSSSSCAACKLLKRKCTSTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILVEV 69

Query: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARYAAANN 120
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQ KM ELQHDLA+A+ARLARY     
Sbjct: 70  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMLELQHDLAIARARLARYTVPAV 129

Query: 121 NYSSSTSLGVLENCVVNMSY-----GGLSFS-GQSSDDISQYGYLCDFTHFPYPF 170
           + +SS S+ + EN  +   Y      G++ S GQSS  ++Q   + DF  FPY F
Sbjct: 130 S-TSSPSVLMDENVGMVSFYDMPCCSGVNESFGQSSSQLTQVQPMNDFGQFPYIF 182

[Close]
BLAST of Cp4.1LG01g21850 vs. TrEMBL
Match: W9SFX1_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_009899 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.8e-52
Identity = 111/155 (71.61%), Postives = 126/155 (81.29%), Query Frame = 1 

Query: 1   MRGCHDTRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60
           M+G H+ RSSSSCAACK LKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKIL EV
Sbjct: 1   MKGSHEPRSSSSCAACKFLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILIEV 60

Query: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARYAAANN 120
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQ +M ELQ DLA+A+ARLAR+AA ++
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRRMVELQRDLAIARARLARFAANSS 120

Query: 121 NYSSSTS--------LGVLENCVVNMSYGGLSFSG 148
           +  SS+S          +L+  V  +   G+  +G
Sbjct: 121 SLCSSSSSSSSSVSNYSILDGRVTEVGLSGIPCAG 155

[Close]
BLAST of Cp4.1LG01g21850 vs. TrEMBL
Match: A0A067FNC5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036565mg PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 6.3e-52
Identity = 119/176 (67.61%), Postives = 136/176 (77.27%), Query Frame = 1 

Query: 1   MRGCHDTRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60
           MRG H+ RSSSSCAACKLLKR+C PTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 10  MRG-HEPRSSSSCAACKLLKRKCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 69

Query: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARYAAANN 120
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQ KM ELQ DLA+A+ARLARY     
Sbjct: 70  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMIELQQDLAVARARLARYTT--- 129

Query: 121 NYSSSTSLGVLENCVVNMS--YGGLSFSG-------QSSDDISQYGYLCDFTHFPY 168
              +++S  VL +  V  S  +  L+  G       Q+S ++++ G + DF+  PY
Sbjct: 130 --PAASSCAVLNDLCVGGSPAFSDLAACGDFFDSFSQNSLELNRVGDMYDFSQVPY 179

[Close]
BLAST of Cp4.1LG01g21850 vs. TAIR10
Match: AT3G11090.1 (AT3G11090.1 LOB domain-containing protein 21)

HSP 1 Score: 186.4 bits (472), Expect = 1.4e-47
Identity = 95/124 (76.61%), Postives = 106/124 (85.48%), Query Frame = 1 

Query: 1   MRGCHDTRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60
           MRG H+ RSSSSCAACKLLKRRCTPTCIFAPYFRS +   FAKVHKVFGASNVSK+L EV
Sbjct: 1   MRG-HEPRSSSSCAACKLLKRRCTPTCIFAPYFRSSDLITFAKVHKVFGASNVSKLLGEV 60

Query: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARYAAANN 120
           PEEQR++TVNSLAYEAE RL+DPVYGCIGAIA LQ KM ELQHDLA+A+ RL  ++  NN
Sbjct: 61  PEEQRQETVNSLAYEAEVRLKDPVYGCIGAIASLQKKMLELQHDLAVARTRLLAHSGVNN 120

Query: 121 NYSS 125
           +  S
Sbjct: 121 SQVS 123

[Close]
BLAST of Cp4.1LG01g21850 vs. TAIR10
Match: AT1G65620.1 (AT1G65620.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 149.8 bits (377), Expect = 1.5e-36
Identity = 71/122 (58.20%), Postives = 95/122 (77.87%), Query Frame = 1 

Query: 9   SSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 68
           ++S CAACK L+R+C P C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 6   TNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVTKLLNELHPSQREDA 65

Query: 69  VNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARYAAANNNYSSSTSL 128
           VNSLAYEA+ RLRDPVYGC+G I+LLQ ++ +LQ DL+ AK+ L++Y +     ++  SL
Sbjct: 66  VNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQIDLSCAKSELSKYQSLGILAATHQSL 125

Query: 129 GV 131
           G+
Sbjct: 126 GI 127

[Close]
BLAST of Cp4.1LG01g21850 vs. TAIR10
Match: AT5G66870.1 (AT5G66870.1 ASYMMETRIC LEAVES 2-like 1)

HSP 1 Score: 148.3 bits (373), Expect = 4.4e-36
Identity = 70/107 (65.42%), Postives = 85/107 (79.44%), Query Frame = 1 

Query: 9   SSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 68
           SSS CAACK L+R+CT  C+FAPYF  D+P+KFA VHKVFGASNV+K+L E+   QRED 
Sbjct: 4   SSSPCAACKFLRRKCTQECVFAPYFPPDQPQKFAFVHKVFGASNVAKLLNELASNQREDA 63

Query: 69  VNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARY 116
           VNSL YEAEARLRDPVYGC+G I++LQ ++ ++ HDL  AK  LA Y
Sbjct: 64  VNSLFYEAEARLRDPVYGCVGLISILQHRLKQVNHDLENAKKELATY 110

[Close]
BLAST of Cp4.1LG01g21850 vs. TAIR10
Match: AT3G27650.1 (AT3G27650.1 LOB domain-containing protein 25)

HSP 1 Score: 145.2 bits (365), Expect = 3.7e-35
Identity = 71/117 (60.68%), Postives = 88/117 (75.21%), Query Frame = 1 

Query: 9   SSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDT 68
           ++S CAACK L+R+CT  C+FAPYF  +EP KFA VH++FGASNVSKIL EV   QRED 
Sbjct: 36  TNSPCAACKFLRRKCTSDCVFAPYFPPEEPTKFANVHRIFGASNVSKILHEVAPHQREDA 95

Query: 69  VNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARYAAANNNYSSS 126
           VNSLAYEAEARL+DPVYGC+GAI++LQ ++  LQ +L    A L RYA      ++S
Sbjct: 96  VNSLAYEAEARLKDPVYGCVGAISVLQRQVLRLQRELEETNADLMRYAGCLGGETTS 152

[Close]
BLAST of Cp4.1LG01g21850 vs. TAIR10
Match: AT5G63090.2 (AT5G63090.2 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 142.9 bits (359), Expect = 1.8e-34
Identity = 69/111 (62.16%), Postives = 85/111 (76.58%), Query Frame = 1 

Query: 10  SSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTV 69
           +S CAACK L+R+C P CIFAPYF  +EP KFA VHK+FGASNV+K+L E+   QRED V
Sbjct: 9   NSPCAACKFLRRKCMPGCIFAPYFPPEEPHKFANVHKIFGASNVTKLLNELLPHQREDAV 68

Query: 70  NSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARYAAANN 121
           NSLAYEAEAR+RDPVYGC+GAI+ LQ ++  LQ +L  A A LA Y  + +
Sbjct: 69  NSLAYEAEARVRDPVYGCVGAISYLQRQVHRLQKELDAANADLAHYGLSTS 119

[Close]
BLAST of Cp4.1LG01g21850 vs. NCBI nr
Match: gi|449441290|ref|XP_004138415.1| (PREDICTED: LOB domain-containing protein 21 [Cucumis sativus])

HSP 1 Score: 299.7 bits (766), Expect = 3.3e-78
Identity = 154/173 (89.02%), Postives = 160/173 (92.49%), Query Frame = 1 

Query: 1   MRGCHDTRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60
           MRG H+TRSSSSCAACKLLKRRC PTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARYAAANN 120
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKM ELQHDLALAKARLARY A NN
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY-ANNN 120

Query: 121 NYSSSTSLGVLENCVVNMSYGGLSFSGQ--SSDDISQYGYLCDFTHFPYPFQA 172
             SSS+S   +ENCVVNMSYGGLSFS +  SSDDI+QYGYLCDFTHFPYPF+A
Sbjct: 121 TSSSSSSSSCVENCVVNMSYGGLSFSAEQSSSDDITQYGYLCDFTHFPYPFKA 172

[Close]
BLAST of Cp4.1LG01g21850 vs. NCBI nr
Match: gi|659081716|ref|XP_008441477.1| (PREDICTED: LOB domain-containing protein 21-like [Cucumis melo])

HSP 1 Score: 298.9 bits (764), Expect = 5.7e-78
Identity = 154/173 (89.02%), Postives = 159/173 (91.91%), Query Frame = 1 

Query: 1   MRGCHDTRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60
           MRG H+TRSSSSCAACKLLKRRC PTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV
Sbjct: 1   MRGWHETRSSSSCAACKLLKRRCIPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60

Query: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARYAAANN 120
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKM ELQHDLALAKARLARY A NN
Sbjct: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMVELQHDLALAKARLARY-AHNN 120

Query: 121 NYSSSTSLGVLENCVVNMSYGGLSFSGQ--SSDDISQYGYLCDFTHFPYPFQA 172
             SSS+S    ENCVVNMSYGGLSFS +  SSDDI+QYGYLCDFTHFPYPF+A
Sbjct: 121 TSSSSSSSSCAENCVVNMSYGGLSFSAEQSSSDDITQYGYLCDFTHFPYPFKA 172

[Close]
BLAST of Cp4.1LG01g21850 vs. NCBI nr
Match: gi|700190595|gb|KGN45799.1| (hypothetical protein Csa_6G012240 [Cucumis sativus])

HSP 1 Score: 235.7 bits (600), Expect = 5.9e-59
Identity = 123/139 (88.49%), Postives = 128/139 (92.09%), Query Frame = 1 

Query: 35  SDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALL 94
           SDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALL
Sbjct: 6   SDEPKKFAKVHKVFGASNVSKILTEVPEEQREDTVNSLAYEAEARLRDPVYGCIGAIALL 65

Query: 95  QTKMAELQHDLALAKARLARYAAANNNYSSSTSLGVLENCVVNMSYGGLSFSGQ--SSDD 154
           QTKM ELQHDLALAKARLARY A NN  SSS+S   +ENCVVNMSYGGLSFS +  SSDD
Sbjct: 66  QTKMVELQHDLALAKARLARY-ANNNTSSSSSSSSCVENCVVNMSYGGLSFSAEQSSSDD 125

Query: 155 ISQYGYLCDFTHFPYPFQA 172
           I+QYGYLCDFTHFPYPF+A
Sbjct: 126 ITQYGYLCDFTHFPYPFKA 143

[Close]
BLAST of Cp4.1LG01g21850 vs. NCBI nr
Match: gi|823249738|ref|XP_012457486.1| (PREDICTED: LOB domain-containing protein 21-like isoform X1 [Gossypium raimondii])

HSP 1 Score: 220.3 bits (560), Expect = 2.6e-54
Identity = 120/173 (69.36%), Postives = 135/173 (78.03%), Query Frame = 1 

Query: 5   HDTRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEVPEEQ 64
           H+ RS+SSCAACKLLKRRC+PTCIFAPYFRSDEPKKFAKVHKVFGASNVSKIL EVPEEQ
Sbjct: 4   HEPRSTSSCAACKLLKRRCSPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILIEVPEEQ 63

Query: 65  REDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARYAAANNNYSS 124
           REDTVNSL YEAEARLRDPVYGCIGAIALLQ KM ELQHDLALA+ARLARYAA   NYS+
Sbjct: 64  REDTVNSLVYEAEARLRDPVYGCIGAIALLQRKMIELQHDLALARARLARYAA---NYST 123

Query: 125 STSLGVLENCVVN------MSYGGL--SFSGQSSDDISQYGYLCDFTHFPYPF 170
             +   L+   V       ++ GG   SF+  SS  ++Q  ++ D T  PY +
Sbjct: 124 GVAGTELDRLTVTGLGEFLVACGGFMDSFNQSSSYQVNQDAHMYDLTQIPYVY 173

[Close]
BLAST of Cp4.1LG01g21850 vs. NCBI nr
Match: gi|702424900|ref|XP_010067553.1| (PREDICTED: LOB domain-containing protein 21 isoform X2 [Eucalyptus grandis])

HSP 1 Score: 215.3 bits (547), Expect = 8.2e-53
Identity = 123/175 (70.29%), Postives = 138/175 (78.86%), Query Frame = 1 

Query: 1   MRGCHDTRSSSSCAACKLLKRRCTPTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILTEV 60
           M+G H+ RSSSSCAACKLLKR+CT TCIFAPYFRSDEPKKFAKVHKVFGASNVSKIL EV
Sbjct: 10  MKG-HEPRSSSSCAACKLLKRKCTSTCIFAPYFRSDEPKKFAKVHKVFGASNVSKILVEV 69

Query: 61  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQTKMAELQHDLALAKARLARYAAANN 120
           PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQ KM ELQHDLA+A+ARLARY     
Sbjct: 70  PEEQREDTVNSLAYEAEARLRDPVYGCIGAIALLQRKMLELQHDLAIARARLARYTVPAV 129

Query: 121 NYSSSTSLGVLENCVVNMSY-----GGLSFS-GQSSDDISQYGYLCDFTHFPYPF 170
           + +SS S+ + EN  +   Y      G++ S GQSS  ++Q   + DF  FPY F
Sbjct: 130 S-TSSPSVLMDENVGMVSFYDMPCCSGVNESFGQSSSQLTQVQPMNDFGQFPYIF 182

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g21850 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LBD21_ARATH2.6e-4676.61LOB domain-containing protein 21 OS=Arabidopsis thaliana GN=LBD21 PE=2 SV=1[more]
LBD6_ARATH2.7e-3558.20LOB domain-containing protein 6 OS=Arabidopsis thaliana GN=LBD6 PE=1 SV=1[more]
LBD36_ARATH7.7e-3565.42LOB domain-containing protein 36 OS=Arabidopsis thaliana GN=LBD36 PE=2 SV=1[more]
LBD25_ARATH6.6e-3460.68LOB domain-containing protein 25 OS=Arabidopsis thaliana GN=LBD25 PE=2 SV=3[more]
LBD6_MAIZE1.1e-3357.85LOB domain-containing protein 6 OS=Zea mays GN=LBD6 PE=1 SV=1[more]
BLAST of Cp4.1LG01g21850 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KAD8_CUCSA4.1e-5988.49Uncharacterized protein OS=Cucumis sativus GN=Csa_6G012240 PE=4 SV=1[more]
B9SQQ2_RICCO5.7e-5367.24LOB domain-containing protein, putative OS=Ricinus communis GN=RCOM_0839580 PE=4... [more]
A0A059BI25_EUCGR5.7e-5370.29Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G03078 PE=4 SV=1[more]
W9SFX1_9ROSA2.8e-5271.61Uncharacterized protein OS=Morus notabilis GN=L484_009899 PE=4 SV=1[more]
A0A067FNC5_CITSI6.3e-5267.61Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g036565mg PE=4 SV=1[more]
BLAST of Cp4.1LG01g21850 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G11090.11.4e-4776.61 LOB domain-containing protein 21[more]
AT1G65620.11.5e-3658.20 Lateral organ boundaries (LOB) domain family protein[more]
AT5G66870.14.4e-3665.42 ASYMMETRIC LEAVES 2-like 1[more]
AT3G27650.13.7e-3560.68 LOB domain-containing protein 25[more]
AT5G63090.21.8e-3462.16 Lateral organ boundaries (LOB) domain family protein[more]
BLAST of Cp4.1LG01g21850 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449441290|ref|XP_004138415.1|3.3e-7889.02PREDICTED: LOB domain-containing protein 21 [Cucumis sativus][more]
gi|659081716|ref|XP_008441477.1|5.7e-7889.02PREDICTED: LOB domain-containing protein 21-like [Cucumis melo][more]
gi|700190595|gb|KGN45799.1|5.9e-5988.49hypothetical protein Csa_6G012240 [Cucumis sativus][more]
gi|823249738|ref|XP_012457486.1|2.6e-5469.36PREDICTED: LOB domain-containing protein 21-like isoform X1 [Gossypium raimondii... [more]
gi|702424900|ref|XP_010067553.1|8.2e-5370.29PREDICTED: LOB domain-containing protein 21 isoform X2 [Eucalyptus grandis][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
cellular_component GO:0005951 carbamoyl-phosphate synthase complex
cellular_component GO:0005667 transcription factor complex
molecular_function GO:0003674 molecular_function
molecular_function GO:0004088 carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g21850.1Cp4.1LG01g21850.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g21850Cucsa.136740Cucumber (Gy14) v1cgycpeB0364
Cp4.1LG01g21850CmaCh15G001400Cucurbita maxima (Rimu)cmacpeB317
Cp4.1LG01g21850CmaCh04G028940Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g21850CmoCh15G001560Cucurbita moschata (Rifu)cmocpeB279
Cp4.1LG01g21850Csa6G012240Cucumber (Chinese Long) v2cpecuB460
Cp4.1LG01g21850MELO3C008309Melon (DHL92) v3.5.1cpemeB400
Cp4.1LG01g21850ClCG11G006030Watermelon (Charleston Gray)cpewcgB355
Cp4.1LG01g21850CSPI06G01790Wild cucumber (PI 183967)cpecpiB461
Cp4.1LG01g21850Lsi03G002970Bottle gourd (USVL1VR-Ls)cpelsiB339
Cp4.1LG01g21850MELO3C008309.2Melon (DHL92) v3.6.1cpemedB465
Cp4.1LG01g21850CsaV3_6G001930Cucumber (Chinese Long) v3cpecucB0569
Cp4.1LG01g21850Bhi04G001877Wax gourdcpewgoB0525
Cp4.1LG01g21850CsGy6G001890Cucumber (Gy14) v2cgybcpeB798
Cp4.1LG01g21850Carg02132Silver-seed gourdcarcpeB0374
Cp4.1LG01g21850Carg05968Silver-seed gourdcarcpeB0034
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g21850Melon (DHL92) v3.6.1cpemedB505
Cp4.1LG01g21850Silver-seed gourdcarcpeB0786
Cp4.1LG01g21850Silver-seed gourdcarcpeB0828
Cp4.1LG01g21850Silver-seed gourdcarcpeB0940
Cp4.1LG01g21850Cucumber (Chinese Long) v3cpecucB0509
Cp4.1LG01g21850Wax gourdcpewgoB0546
Cp4.1LG01g21850Cucurbita pepo (Zucchini)cpecpeB074
Cp4.1LG01g21850Cucurbita pepo (Zucchini)cpecpeB199
Cp4.1LG01g21850Cucurbita pepo (Zucchini)cpecpeB376
Cp4.1LG01g21850Cucumber (Gy14) v1cgycpeB0344
Cp4.1LG01g21850Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g21850Cucumber (Chinese Long) v2cpecuB413
Cp4.1LG01g21850Watermelon (97103) v1cpewmB445
Cp4.1LG01g21850Watermelon (97103) v1cpewmB461
Cp4.1LG01g21850Melon (DHL92) v3.5.1cpemeB433
Cp4.1LG01g21850Cucumber (Gy14) v2cgybcpeB514