Cp4.1LG01g18290 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g18290
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUbiquitin-conjugating enzyme variant
LocationCp4.1LG01 : 15592745 .. 15598046 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCTATGCCACCACCTTAGCCGCTGTCAATCAAGCAGATCAATGGAACGGCAGTGATCTGCAGGTGCAGGGGAAGTACCATAGGCTGCGAAGCACATGACTACTCTGCTTTTTGCCTCTTCCGAGTACAGAACAGTAGTTGACTCCTTAATTATTTCTTGTGTTACTCCATTCTCTTTCTCTCTCTCTCTCTCTCATCTATCTTCTATCGCACGCTTTCTCTCTCTTACAGTTAAGTTTGGGAGCCCTAGCTCAGACACCGATCGTCTAAAATGGGTGACGAGGCCGAGAAGGTAGTCGGTGAGTCTTTGAAACCCCAATCTATCCGATTCCATAATTCGATCATTTCTATCTTGTTAGGTTTTTTCTTCTTTCTGATGCGAATTCTGATTCTGCAACGCCTTTTCTTGTTTGTTCTTTTTCGGGATGTTGGAGTTTGTTCTGTTCCGGAATCAACTTTTATTATGATTTTTCACTCTCTCGCCAATGTCTGGAAATTACGTTAGTGAATTTGGAAATATTGTGCTTCGGATATGCTTGGATTTTTTTGTTTACTCCAAATTGGAAGAGTGTGGTGATATGGATGGATTAGACTATTTTCGTTTCATTTTCTAATTGAAGTAATCATTTGGTTCGCTTTATCTTATGTTGTCTGCTTTACATTGGATAGATACATTTTGAAAATGAATCTATTTGTTTAGTTTCCGTTGCTATGTTCATGTTATTTCTTCAACAATCTGTAATTTATTCTTCGAAAGATTGTGGTGGTTAGAGGACAGTAAATGACGATGAATGAGAACTCGTCATACATCTTAATGAATTTTTTTCACCTTGTTCAAAGAAGTTCATAATTGTTGCACCATGAGATCTAATTTTGTTTATTTGTTATTATCATTTTTGCAGTTCCCCGAAACTTCAGATTACTGGAAGAACTTGAAAGAGGTGAAAAAGGAATCGGGGATGGGACTGTGAGTTATGGAATGGATGATGCTGATGATATCTATATGGCGTCTTGGACGGGAACAATTATAGGGCCACCTAATGTAAGTTCATTTTTCATCCATTTTGTTCATTGCTTATTGTCTCTGATGACATCTGGGTCGACTGCTATAAATATTGATATGGATAGTTTCAAAGAATGATGGAGATATCATACTCTAAAGAGTATTGTTAACTTTGTTATCATCAAAATTTAGATAATTGAATTTTTGGGAAATGTAGTTACATAACTACATTTCGTCTTTACCTTGAAAATTCATCACAAAAGAAAATTGGTATTTTTGAGTATCTTTCTCATGTTGATGAAAATGAGCATTGCAGCATCATTGCGTTGGTTGAAGTTGATGTATTCTTCTTTATTATTGTTGTTGTTGGGGAGAGCGCGAATAGAATTGTAAATTGAATCGTTGCTTTCTTGCTTTTCAGACTGTTCATGAAGGACGGATTTATCAACTCAAGCTATTCTGTGGACAGGATTATCCTGATAATCCTCCCAGCGTGAGATTTCAAACTCGGATTAATATGACCTGTGTCAATCCAGAAACTGGTGTGGTATGTGATGATTTTGTGAAACACTTACTGCATTGTGACGAAAATAAATTAACAGCTTAGCTGAATGATTAGGTGGAACCAAGCCTTTTTCCCATGCTTTCTAATTGGCAAAGGGAGCATACAATGGAGGACATATTAATGCAGTTGAAGAAAGAAATGACTTCTCCCCAGAACAGGAGACTAAGTCAGCCTTCTGAAGGTGAGTTTATTCATTTATTCACTTCTCATTATGGACAGCACACCCCTCTCGTTAGTATATACAGCAGATTGAATGGATTTGCATGCTTGAGAAACTATATCTTATTAAAAAAATGTACCTGAGGGAATATAAGATTTGTTTCGTCCAGTCAAGAAGGCTATCCAGTGAAGGAGGTTCCGAGATGACACTCCATTATCTAAAACAAAAAAGATCTGAATGCAAAAGTGATTTGAGAGAGTATGTTAATTTCTAACTAGCAATCTAGCTATATCCCAAAACATCTAGGTTCCCACATTCTGTCTTTAAAACTGTGTGGTTTCGTTTTCGCTCCCACCTCCTACAGATCACTTTCATAGCATTAACTTTTAGACTTCAATTTAGTCTATGAAATTATGGTTTCAAAAGAGTTGGAAATAGCCTGTTTGCTATCCTGAGGAAACACCATTGCAATCCAGATCTATCCAACAATCTAAACGGGCAGGATGAATTGGGGGCAAGAAAATAAAAGGTGGTCTTGGTCTTCCAAACATCTATACATTAATGTGTCATTTAAGAGTCAAAGCTAGGCTTGGGAATTCCATCCTAATTCTGTCTCTAGTTTTACTACGCTCCGGCACTAAAGTGCAAGGGAAGGACTTGCTGGCATTCAGTATGCTATTGAGAAGATGGGGTTAATGTATGGTGGCCTGGATGAAATGTGAAAGCTGGTTGAAATGGACTTACAAGTGAATTGGCTTGACATATCCAAGGTTCAACTCCATAACCTTGGTGCTGGTTGGGTTCAGTTAAAAAGAGCAGCCCACTTCTGGTCTCTGCTTCAAATAGGGTTCTGGGAAATTTACTGTCAGGAGCCCTCATCACTGAGCCATTGTTAGTTTATGAATTATTCTTTGGAACTCTACCAACCCATAGAGTCTATGGTAAATAATAGGAAATGTCTGTTCTTCAAACGATATGCTTTCGAAGACATAACTCTATCCTCTCTGGCCATTAACTTTCAAGGACAATCCTGTTTCCTGAATGCATATAGAAGAAATATGCATTCAAGAACTTGGGACAGTGAGAACTTATGGTTTCCAGCCTCTTGATCAAGCCCATATGAACTAATAGAAAATTTAACCCATAAAGGTTATGCCTTTGAATTAGACACTCATCTCCATTTCGATATCAAAGCTGTATTTGTGTTCTTTAGGCCTCCTCTCTCAGGATTACCTCTTTCAACAAGAATGGAGACCTCCCGTCCCATTAGGTGATAACCTTTAATTTCTGTTCTTCTCTTAAATTTCCAAGGCATATTGAATTTAAGAAAGAGGGTATGGGGATATGCTTGAAAGAAAAGAGATTTCAGAAGCATTATTCTGCGTTGGGAGTATGTAACTTGCTTAAACTCAATATGTAACTCCTAAACAGAGATTTCAGGAGTATGTAACTTGCTTCATTTAAGCATCCTCTGTGGTCTCTCAAAATCTATGGGCTCGTCCAGACTCCAGGTGGCACACCCAAGTAAAGACAATAGCCTCCTAATTAGTCGAGAAGGAACAAGTGCATGTGAGAGGCCAGAGGGAGGCTCAAAGTAGGAATTTTCTGCATGATAGCTCTATTTAATTCATTTATTTTCTGTTAAATTGTGGAATGGTAACTGTTCACCCTAAGGGGCTAAGAATCGAATCACATATACGAATATGAGATACAAATACAATACAACACATACACTGCAATGTCATTTTATATAAATCTAGGACATGGACATGTTTATTAAAATATACATTTTTAAAATATGTATCATTTTGATACTAGGCAATTCAAAGTCCGTTTGTTTATGCATGGATATGCTTAAAAGAATGATTTTGATGTATCACTCCCAAAATTTATTATTACATGTCAATTTAGTATACTTAATAAATGTTATATATGTGTTTAACATATGTTGGATCTATATTGACTTTAGTGCAACTAATGTCTAACACATCTATTGTGCTAACAAGTGCCCTATATGTGTCCAACAAGTTTTGGAGCATCTAAATGTCCGACATATGTTGGACATGGACAAGCTAGCCAAACTGATGTATTTGTGCTTATTATACCTATGGAATCAAGATCTACCACATAACCACTCGGTTTTGGAGAAAGTGAAAAATAAAAGAGACTTTGGGATCAAATCAATAGTGGCTACCTAGCTAGCATGTCTTTTCTAACAACCAAATATCTTTGAACTGGGTAAGAAAAGATCGATCAGGCTATGTGTTGGTTAGGGTCACGAATGCCAAAAATACCGCTGCAGGGTTTGTCCAGCAATAAACACAATTCAATGATCTGACGAGGAGAGCTTGAAGAATCAAAGCGAAAGTCCTAATCTTTCATAACTCTGTTCCACATCATGCAATGTACTGTTTAAATTAGAGGATATTTATAGAGCTGTTAGTGGTGCTGGCATATCAGGCGTGACACTTCAGTGTCATCCATCAGGTGGGTTCATGAGATGTCTTCCAGTGGTACCATATATGGAAAGCATTAAGAACTTTAACAATCTGTCCTTGACAGAGCTCCGTCTTGTTAAAGTGACATCATTTGGTCGAATCTGATAAACCGTACCAGTGGACTATTTTTTAGATGTCTCGTTACTTTGGAGTGGCTGTGGCTTCTGCTAGTGAAGTTCGATCATGATTCTTAAAATGTTTTAAGGCCCATTCATTCGCTTGTCTTGTGATATCTTCAACATCATAATATCTTTCCTGTCAATTACCACTGGCTAGTAATTAAGTCTGGAGAACTTACTTGTTGCAGGTAATGAAGATGGACGAGTAGACCAAAAGGGGCTAGTGTTGAAATGTTGCATTCTTTAAAGGTAAAAGGCCAACAACTAAGATATTGTAAATAAGCTTATGTTACTATTTGAGCAACATGCTTTTGTCTACACGTATTTGAATGAATGAATGAAGTTGAGTTGTGGTCCATTAAGTGAGATGTTTGTCAGAATATCAATATCTTCTTCTCTGCTATTTTTGCTTGTAGCCTTCCTTTTGGACACCCCATTAATGAGGCTGTTCTGAAAGATCATCAAAAGAGATAAAAGTGAAAAGGAATCAACCAAAATCTGTGTAGATTCTGTTCCCCACTAACCCTTCCCTCTCTGCATTCTCTCAACTTTTAATTCACTGTTAGTGACAAAAATGAAGAACTTTTGTAGCTTTATTCTATTCCTACTTCCATTATTGTCCGAGATTTCAGATTGTTGTATGTACATACATAGAATTCGAATGACCTCTTTCAACTTTTGGTTCTTGTCTTGCTCTCGCTTTTCTTGATGATTTGNTTTTTAGATGTCTCGTTACTTTGGAGTGGCTGTGGCTTCTGCTAGTGAAGTTCGATCATGATTCTTAAAATGTTTTAAGGCCCATTCATTCGCTTGTCTTGTGATATCTTCAACATCATAATATCTTTCCTGTCAATTACCACTGGCTAGTAATTAAGTCTGGAGAACTTACTTGTTGCAGGTAATGAAGATGGACGAGTAGACCAAAAGGGGCTAGTGTTGAAATGTTGCATTCTTTAA

mRNA sequence

ATCTATGCCACCACCTTAGCCGCTGTCAATCAAGCAGATCAATGGAACGGCAGTGATCTGCAGCTCAGACACCGATCGTCTAAAATGGGTGACGAGGCCGAGAAGGTAGTCGTTCCCCGAAACTTCAGATTACTGGAAGAACTTGAAAGAGGTGAAAAAGGAATCGGGGATGGGACTGTGAGTTATGGAATGGATGATGCTGATGATATCTATATGGCGTCTTGGACGGGAACAATTATAGGGCCACCTAATACTGTTCATGAAGGACGGATTTATCAACTCAAGCTATTCTGTGGACAGGATTATCCTGATAATCCTCCCAGCGTGAGATTTCAAACTCGGATTAATATGACCTGTGTCAATCCAGAAACTGGTGTGGTGGAACCAAGCCTTTTTCCCATGCTTTCTAATTGGCAAAGGGAGCATACAATGGAGGACATATTAATGCAGTTGAAGAAAGAAATGACTTCTCCCCAGAACAGGAGACTAAGTCAGCCTTCTGAAGGTAATGAAGATGGACGAGTAGACCAAAAGGGGCTAGTGTTGAAATGTTGCATTCTTTAA

Coding sequence (CDS)

ATCTATGCCACCACCTTAGCCGCTGTCAATCAAGCAGATCAATGGAACGGCAGTGATCTGCAGCTCAGACACCGATCGTCTAAAATGGGTGACGAGGCCGAGAAGGTAGTCGTTCCCCGAAACTTCAGATTACTGGAAGAACTTGAAAGAGGTGAAAAAGGAATCGGGGATGGGACTGTGAGTTATGGAATGGATGATGCTGATGATATCTATATGGCGTCTTGGACGGGAACAATTATAGGGCCACCTAATACTGTTCATGAAGGACGGATTTATCAACTCAAGCTATTCTGTGGACAGGATTATCCTGATAATCCTCCCAGCGTGAGATTTCAAACTCGGATTAATATGACCTGTGTCAATCCAGAAACTGGTGTGGTGGAACCAAGCCTTTTTCCCATGCTTTCTAATTGGCAAAGGGAGCATACAATGGAGGACATATTAATGCAGTTGAAGAAAGAAATGACTTCTCCCCAGAACAGGAGACTAAGTCAGCCTTCTGAAGGTAATGAAGATGGACGAGTAGACCAAAAGGGGCTAGTGTTGAAATGTTGCATTCTTTAA

Protein sequence

IYATTLAAVNQADQWNGSDLQLRHRSSKMGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDILMQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL
Homology
[Close]
BLAST of Cp4.1LG01g18290 vs. Swiss-Prot
Match: UEV1B_ARATH (Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana GN=UEV1B PE=1 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 4.6e-73
Identity = 125/159 (78.62%), Postives = 144/159 (90.57%), Query Frame = 1 

Query: 29  MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 88
           MG E EKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDI M SWTGTI+GP NT +E
Sbjct: 1   MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60

Query: 89  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 148
           G+I+QLKLFCG+DYP++PP+VRFQ+RINM CVNPE GVV+PS FPMLSNW+RE TMED+L
Sbjct: 61  GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLL 120

Query: 149 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 188
           +QLKKEM S QNR+L+QP EGNE+GR D KGLV+KCC++
Sbjct: 121 IQLKKEMMSSQNRKLAQPLEGNEEGRTDPKGLVVKCCVM 159

[Close]
BLAST of Cp4.1LG01g18290 vs. Swiss-Prot
Match: UEV1A_ARATH (Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana GN=UEV1A PE=1 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 7.3e-71
Identity = 122/159 (76.73%), Postives = 142/159 (89.31%), Query Frame = 1 

Query: 29  MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 88
           M  E  KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYM SWTGTI+GPPNT +E
Sbjct: 1   MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYE 60

Query: 89  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 148
           G+I+QLKLFCG++YP++PP+VRFQTRINM CVNPETGVVEPSLFPML+NW+RE+TMEDIL
Sbjct: 61  GKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDIL 120

Query: 149 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 188
           ++LKKEM +  NR+L+QP EGNE+ R D KG   KCC++
Sbjct: 121 VKLKKEMMTSHNRKLAQPPEGNEEARADPKG-PAKCCVM 158

[Close]
BLAST of Cp4.1LG01g18290 vs. Swiss-Prot
Match: UEV1D_ARATH (Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana GN=UEV1D PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.6e-60
Identity = 107/141 (75.89%), Postives = 121/141 (85.82%), Query Frame = 1 

Query: 29  MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 88
           +G     VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DDIYM SWTGTIIGP NTVHE
Sbjct: 3   LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHE 62

Query: 89  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 148
           GRIYQLKLFC +DYP+ PP+VRF +R+NM CVN ETGVV+P  F +L+NWQRE+TMEDIL
Sbjct: 63  GRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDIL 122

Query: 149 MQLKKEMTSPQNRRLSQPSEG 170
           +QLKKEM++  NR+L QP EG
Sbjct: 123 VQLKKEMSTSHNRKLVQPPEG 143

[Close]
BLAST of Cp4.1LG01g18290 vs. Swiss-Prot
Match: UEV1C_ARATH (Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana GN=UEV1C PE=1 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.4e-58
Identity = 105/134 (78.36%), Postives = 117/134 (87.31%), Query Frame = 1 

Query: 36  VVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLK 95
           VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DDIYM SWTGTIIGP NTVHEGRIYQLK
Sbjct: 9   VVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLK 68

Query: 96  LFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDILMQLKKEM 155
           LFC +DYP+ PP+VRF +RINMTCVN +TGVV+   F +L+NWQR++TMEDIL QLKKEM
Sbjct: 69  LFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLKKEM 128

Query: 156 TSPQNRRLSQPSEG 170
            +  NR+L QP EG
Sbjct: 129 AASHNRKLVQPPEG 142

[Close]
BLAST of Cp4.1LG01g18290 vs. Swiss-Prot
Match: UBE2V_DICDI (Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum GN=ube2v PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 9.3e-42
Identity = 74/132 (56.06%), Postives = 101/132 (76.52%), Query Frame = 1 

Query: 38  VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLF 97
           +PRNF LLEELE GEK  GDGT+SYG++  DDI ++SW GTIIGP NT  + R Y LKL+
Sbjct: 4   IPRNFVLLEELESGEKSTGDGTISYGLESPDDILLSSWIGTIIGPQNTPFDNRFYSLKLY 63

Query: 98  CGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDILMQLKKEMTS 157
           C +DYP+ PP+VRF T+IN+ CVN + GVV+P   P+LSNW  ++ +++IL +L++EM+S
Sbjct: 64  CDKDYPNKPPTVRFTTKINIGCVNQQNGVVDPKNLPILSNWTSKNRIQNILSELRREMSS 123

Query: 158 PQNRRLSQPSEG 170
             N++L QP EG
Sbjct: 124 SSNKKLVQPPEG 135

[Close]
BLAST of Cp4.1LG01g18290 vs. TrEMBL
Match: A0A0A0KSP5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G547590 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 8.7e-87
Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 1 

Query: 29  MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 88
           MGDEA KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE
Sbjct: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60

Query: 89  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 148
           GRIYQLKLFCGQDYPDNPP+VRFQTRINMTCVN ETGVVEPSLFPML+NWQREHTMEDIL
Sbjct: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNSETGVVEPSLFPMLANWQREHTMEDIL 120

Query: 149 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 188
           MQLKKEMTSPQNRRLSQPSEGNEDGR+DQKGLVLKCCIL
Sbjct: 121 MQLKKEMTSPQNRRLSQPSEGNEDGRIDQKGLVLKCCIL 159

[Close]
BLAST of Cp4.1LG01g18290 vs. TrEMBL
Match: A0A061E9M9_THECC (Mms zwei OS=Theobroma cacao GN=TCM_011026 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 1.8e-79
Identity = 141/159 (88.68%), Postives = 150/159 (94.34%), Query Frame = 1 

Query: 29  MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 88
           MG E  +VVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDI+M SWTGTIIGPPNTVHE
Sbjct: 118 MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPNTVHE 177

Query: 89  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 148
           GRIYQLKLFCG+DYPDNPPSVRFQTRINMTCVN ETGVVEPSLFPML+NWQRE+TMEDIL
Sbjct: 178 GRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNQETGVVEPSLFPMLANWQREYTMEDIL 237

Query: 149 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 188
            QLKKEM SPQNR+L+QP EGNE+ R+DQKGLVLKCCIL
Sbjct: 238 TQLKKEMMSPQNRKLAQPPEGNEEARLDQKGLVLKCCIL 276

[Close]
BLAST of Cp4.1LG01g18290 vs. TrEMBL
Match: A5B7Q8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05630 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 1.8e-79
Identity = 141/159 (88.68%), Postives = 148/159 (93.08%), Query Frame = 1 

Query: 29  MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 88
           MG E   VVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYM SWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSGVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPNTVHE 60

Query: 89  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 148
           GRIYQLKLFCGQDYPDNPP+V+FQTRINMTCVN ETGVVEPSLFPML+ WQREHTMEDIL
Sbjct: 61  GRIYQLKLFCGQDYPDNPPTVKFQTRINMTCVNQETGVVEPSLFPMLATWQREHTMEDIL 120

Query: 149 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 188
            QLKKEM SPQNR+L+QP EGNE+ R+DQKGLVLKCCIL
Sbjct: 121 TQLKKEMMSPQNRKLAQPPEGNEEARIDQKGLVLKCCIL 159

[Close]
BLAST of Cp4.1LG01g18290 vs. TrEMBL
Match: A0A067KPG6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04749 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 3.9e-79
Identity = 142/159 (89.31%), Postives = 148/159 (93.08%), Query Frame = 1 

Query: 29  MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 88
           MG E  +VVVPRNFRLLEELERGEKGIG GTVSYGMDDADDIYM SWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGGGTVSYGMDDADDIYMQSWTGTIIGPPNTVHE 60

Query: 89  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 148
           GRIYQLKLFCG+DYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPML+NWQRE TMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLANWQRECTMEDIL 120

Query: 149 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 188
            QLKKEM SPQNR+L QP EGNE+ R+DQKGLVLKCCIL
Sbjct: 121 TQLKKEMMSPQNRKLVQPPEGNEEARMDQKGLVLKCCIL 159

[Close]
BLAST of Cp4.1LG01g18290 vs. TrEMBL
Match: A0A0D2SHW4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G158400 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 5.1e-79
Identity = 140/159 (88.05%), Postives = 149/159 (93.71%), Query Frame = 1 

Query: 29  MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 88
           MG E  +VVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYM SWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPNTVHE 60

Query: 89  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 148
           GRIYQLKLFCG DYPDNPPSVRFQTRINMTCVN ETGVVEPSLFPML+NWQRE+TMEDIL
Sbjct: 61  GRIYQLKLFCGLDYPDNPPSVRFQTRINMTCVNQETGVVEPSLFPMLANWQREYTMEDIL 120

Query: 149 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 188
            QLKKEM SPQNRR++QP EGNE+ R+DQKGLV+KCCI+
Sbjct: 121 TQLKKEMMSPQNRRMAQPPEGNEEARLDQKGLVVKCCIV 159

[Close]
BLAST of Cp4.1LG01g18290 vs. TAIR10
Match: AT1G70660.1 (AT1G70660.1 MMS ZWEI homologue 2)

HSP 1 Score: 275.4 bits (703), Expect = 2.6e-74
Identity = 125/159 (78.62%), Postives = 144/159 (90.57%), Query Frame = 1 

Query: 29  MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 88
           MG E EKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDI M SWTGTI+GP NT +E
Sbjct: 1   MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60

Query: 89  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 148
           G+I+QLKLFCG+DYP++PP+VRFQ+RINM CVNPE GVV+PS FPMLSNW+RE TMED+L
Sbjct: 61  GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLL 120

Query: 149 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 188
           +QLKKEM S QNR+L+QP EGNE+GR D KGLV+KCC++
Sbjct: 121 IQLKKEMMSSQNRKLAQPLEGNEEGRTDPKGLVVKCCVM 159

[Close]
BLAST of Cp4.1LG01g18290 vs. TAIR10
Match: AT1G23260.1 (AT1G23260.1 MMS ZWEI homologue 1)

HSP 1 Score: 268.1 bits (684), Expect = 4.1e-72
Identity = 122/159 (76.73%), Postives = 142/159 (89.31%), Query Frame = 1 

Query: 29  MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 88
           M  E  KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYM SWTGTI+GPPNT +E
Sbjct: 1   MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYE 60

Query: 89  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 148
           G+I+QLKLFCG++YP++PP+VRFQTRINM CVNPETGVVEPSLFPML+NW+RE+TMEDIL
Sbjct: 61  GKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDIL 120

Query: 149 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 188
           ++LKKEM +  NR+L+QP EGNE+ R D KG   KCC++
Sbjct: 121 VKLKKEMMTSHNRKLAQPPEGNEEARADPKG-PAKCCVM 158

[Close]
BLAST of Cp4.1LG01g18290 vs. TAIR10
Match: AT3G52560.4 (AT3G52560.4 ubiquitin E2 variant 1D-4)

HSP 1 Score: 221.9 bits (564), Expect = 3.4e-58
Identity = 107/159 (67.30%), Postives = 121/159 (76.10%), Query Frame = 1 

Query: 29  MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPN---- 88
           +G     VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DDIYM SWTGTIIGP N    
Sbjct: 3   LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNIMPL 62

Query: 89  --------------TVHEGRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPS 148
                         TVHEGRIYQLKLFC +DYP+ PP+VRF +R+NM CVN ETGVV+P 
Sbjct: 63  LLLLVVTEINFMSQTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPK 122

Query: 149 LFPMLSNWQREHTMEDILMQLKKEMTSPQNRRLSQPSEG 170
            F +L+NWQRE+TMEDIL+QLKKEM++  NR+L QP EG
Sbjct: 123 KFGLLANWQREYTMEDILVQLKKEMSTSHNRKLVQPPEG 161

[Close]
BLAST of Cp4.1LG01g18290 vs. TAIR10
Match: AT2G36060.2 (AT2G36060.2 MMS ZWEI homologue 3)

HSP 1 Score: 221.9 bits (564), Expect = 3.4e-58
Identity = 105/135 (77.78%), Postives = 117/135 (86.67%), Query Frame = 1 

Query: 36  VVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPN-TVHEGRIYQL 95
           VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DDIYM SWTGTIIGP N TVHEGRIYQL
Sbjct: 9   VVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRIYQL 68

Query: 96  KLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDILMQLKKE 155
           KLFC +DYP+ PP+VRF +RINMTCVN +TGVV+   F +L+NWQR++TMEDIL QLKKE
Sbjct: 69  KLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLKKE 128

Query: 156 MTSPQNRRLSQPSEG 170
           M +  NR+L QP EG
Sbjct: 129 MAASHNRKLVQPPEG 143

[Close]
BLAST of Cp4.1LG01g18290 vs. TAIR10
Match: AT3G46460.1 (AT3G46460.1 ubiquitin-conjugating enzyme 13)

HSP 1 Score: 60.5 bits (145), Expect = 1.3e-09
Identity = 40/136 (29.41%), Postives = 69/136 (50.74%), Query Frame = 1 

Query: 61  SYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLFCGQDYPDNPPSVRFQTRINMTCV 120
           S G+ D  +I+   W+ TIIGPP+T++EG  +   +   Q+YP++PP+VRF + I    V
Sbjct: 25  SAGLVDEKNIF--EWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNV 84

Query: 121 NPETGVV---------EPSLFPMLS-NWQREHTMEDILMQLKKEMTSPQNRRLSQPSEGN 180
            P+  V          +PS + + S  W   HT+E I++ +   ++ P +   +      
Sbjct: 85  YPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAK 144

Query: 181 E--DGRVDQKGLVLKC 185
           E  + R + K  V +C
Sbjct: 145 EWREKRDEFKKKVSRC 158

[Close]
BLAST of Cp4.1LG01g18290 vs. NCBI nr
Match: gi|659074599|ref|XP_008437691.1| (PREDICTED: uncharacterized protein LOC103483035 [Cucumis melo])

HSP 1 Score: 331.6 bits (849), Expect = 8.6e-88
Identity = 155/160 (96.88%), Postives = 159/160 (99.38%), Query Frame = 1 

Query: 28  KMGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVH 87
           KMGDEA KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVH
Sbjct: 561 KMGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVH 620

Query: 88  EGRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDI 147
           EGRIYQLKLFCGQDYPDNPP+VRFQTR+NMTCVNPETGVVEPSLFPML+NWQREHTMEDI
Sbjct: 621 EGRIYQLKLFCGQDYPDNPPNVRFQTRVNMTCVNPETGVVEPSLFPMLANWQREHTMEDI 680

Query: 148 LMQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 188
           LMQLKKEMTSPQNRRLSQPSEGNEDGR+DQKGLVLKCCIL
Sbjct: 681 LMQLKKEMTSPQNRRLSQPSEGNEDGRMDQKGLVLKCCIL 720

[Close]
BLAST of Cp4.1LG01g18290 vs. NCBI nr
Match: gi|778708601|ref|XP_011656243.1| (PREDICTED: zinc finger protein VAR3, chloroplastic [Cucumis sativus])

HSP 1 Score: 327.8 bits (839), Expect = 1.2e-86
Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 1 

Query: 29  MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 88
           MGDEA KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE
Sbjct: 521 MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 580

Query: 89  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 148
           GRIYQLKLFCGQDYPDNPP+VRFQTRINMTCVN ETGVVEPSLFPML+NWQREHTMEDIL
Sbjct: 581 GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNSETGVVEPSLFPMLANWQREHTMEDIL 640

Query: 149 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 188
           MQLKKEMTSPQNRRLSQPSEGNEDGR+DQKGLVLKCCIL
Sbjct: 641 MQLKKEMTSPQNRRLSQPSEGNEDGRIDQKGLVLKCCIL 679

[Close]
BLAST of Cp4.1LG01g18290 vs. NCBI nr
Match: gi|700196265|gb|KGN51442.1| (hypothetical protein Csa_5G547590 [Cucumis sativus])

HSP 1 Score: 327.8 bits (839), Expect = 1.2e-86
Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 1 

Query: 29  MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 88
           MGDEA KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE
Sbjct: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60

Query: 89  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 148
           GRIYQLKLFCGQDYPDNPP+VRFQTRINMTCVN ETGVVEPSLFPML+NWQREHTMEDIL
Sbjct: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNSETGVVEPSLFPMLANWQREHTMEDIL 120

Query: 149 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 188
           MQLKKEMTSPQNRRLSQPSEGNEDGR+DQKGLVLKCCIL
Sbjct: 121 MQLKKEMTSPQNRRLSQPSEGNEDGRIDQKGLVLKCCIL 159

[Close]
BLAST of Cp4.1LG01g18290 vs. NCBI nr
Match: gi|1000952257|ref|XP_015578946.1| (PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B [Ricinus communis])

HSP 1 Score: 305.8 bits (782), Expect = 5.1e-80
Identity = 141/159 (88.68%), Postives = 151/159 (94.97%), Query Frame = 1 

Query: 29  MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 88
           MG E  +VVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDI+M SWTGTIIGPP+TVHE
Sbjct: 3   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIFMQSWTGTIIGPPSTVHE 62

Query: 89  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 148
           GRIYQLKLFCG+DYPDNPPSVRFQTRINMTCVNPETG VEPSLFPML+NWQRE+TMEDIL
Sbjct: 63  GRIYQLKLFCGKDYPDNPPSVRFQTRINMTCVNPETGAVEPSLFPMLANWQREYTMEDIL 122

Query: 149 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 188
            QLKKEM SPQNR+L+QP EGNE+GR+DQKGLVLKCCIL
Sbjct: 123 TQLKKEMVSPQNRKLAQPPEGNEEGRMDQKGLVLKCCIL 161

[Close]
BLAST of Cp4.1LG01g18290 vs. NCBI nr
Match: gi|225424357|ref|XP_002284969.1| (PREDICTED: ubiquitin-conjugating enzyme E2 variant 1A [Vitis vinifera])

HSP 1 Score: 303.5 bits (776), Expect = 2.5e-79
Identity = 141/159 (88.68%), Postives = 148/159 (93.08%), Query Frame = 1 

Query: 29  MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 88
           MG E   VVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYM SWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSGVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPNTVHE 60

Query: 89  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 148
           GRIYQLKLFCGQDYPDNPP+V+FQTRINMTCVN ETGVVEPSLFPML+ WQREHTMEDIL
Sbjct: 61  GRIYQLKLFCGQDYPDNPPTVKFQTRINMTCVNQETGVVEPSLFPMLATWQREHTMEDIL 120

Query: 149 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 188
            QLKKEM SPQNR+L+QP EGNE+ R+DQKGLVLKCCIL
Sbjct: 121 TQLKKEMMSPQNRKLAQPPEGNEEARIDQKGLVLKCCIL 159

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g18290 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UEV1B_ARATH4.6e-7378.62Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana GN=UEV1B PE=1... [more]
UEV1A_ARATH7.3e-7176.73Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana GN=UEV1A PE=1... [more]
UEV1D_ARATH2.6e-6075.89Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana GN=UEV1D PE=1... [more]
UEV1C_ARATH2.4e-5878.36Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana GN=UEV1C PE=1... [more]
UBE2V_DICDI9.3e-4256.06Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum GN=... [more]
BLAST of Cp4.1LG01g18290 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSP5_CUCSA8.7e-8796.86Uncharacterized protein OS=Cucumis sativus GN=Csa_5G547590 PE=4 SV=1[more]
A0A061E9M9_THECC1.8e-7988.68Mms zwei OS=Theobroma cacao GN=TCM_011026 PE=4 SV=1[more]
A5B7Q8_VITVI1.8e-7988.68Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05630 PE=4 SV=... [more]
A0A067KPG6_JATCU3.9e-7989.31Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04749 PE=4 SV=1[more]
A0A0D2SHW4_GOSRA5.1e-7988.05Uncharacterized protein OS=Gossypium raimondii GN=B456_005G158400 PE=4 SV=1[more]
BLAST of Cp4.1LG01g18290 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G70660.12.6e-7478.62 MMS ZWEI homologue 2[more]
AT1G23260.14.1e-7276.73 MMS ZWEI homologue 1[more]
AT3G52560.43.4e-5867.30 ubiquitin E2 variant 1D-4[more]
AT2G36060.23.4e-5877.78 MMS ZWEI homologue 3[more]
AT3G46460.11.3e-0929.41 ubiquitin-conjugating enzyme 13[more]
BLAST of Cp4.1LG01g18290 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074599|ref|XP_008437691.1|8.6e-8896.88PREDICTED: uncharacterized protein LOC103483035 [Cucumis melo][more]
gi|778708601|ref|XP_011656243.1|1.2e-8696.86PREDICTED: zinc finger protein VAR3, chloroplastic [Cucumis sativus][more]
gi|700196265|gb|KGN51442.1|1.2e-8696.86hypothetical protein Csa_5G547590 [Cucumis sativus][more]
gi|1000952257|ref|XP_015578946.1|5.1e-8088.68PREDICTED: ubiquitin-conjugating enzyme E2 variant 1B [Ricinus communis][more]
gi|225424357|ref|XP_002284969.1|2.5e-7988.68PREDICTED: ubiquitin-conjugating enzyme E2 variant 1A [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006301 postreplication repair
biological_process GO:0070534 protein K63-linked ubiquitination
cellular_component GO:0005575 cellular_component
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005634 nucleus
molecular_function GO:0003674 molecular_function
molecular_function GO:0046872 metal ion binding
molecular_function GO:0061630 ubiquitin protein ligase activity
molecular_function GO:0031625 ubiquitin protein ligase binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g18290.1Cp4.1LG01g18290.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 69..162
score: 6.3
IPR000608Ubiquitin-conjugating enzyme E2PROFILEPS50127UBIQUITIN_CONJUGAT_2coord: 42..166
score: 18
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 36..170
score: 1.0
IPR016135Ubiquitin-conjugating enzyme/RWD-likeunknownSSF54495UBC-likecoord: 37..169
score: 7.39
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 19..172
score: 1.2
NoneNo IPR availablePANTHERPTHR24067:SF46LD28904Pcoord: 19..172
score: 1.2
NoneNo IPR availableSMARTSM00212ubc_7coord: 42..186
score: 1.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g18290Cucsa.012160Cucumber (Gy14) v1cgycpeB0523
Cp4.1LG01g18290CmaCh15G009760Cucurbita maxima (Rimu)cmacpeB319
Cp4.1LG01g18290CmaCh04G021100Cucurbita maxima (Rimu)cmacpeB721
Cp4.1LG01g18290CmoCh04G022110Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g18290CmoCh15G010230Cucurbita moschata (Rifu)cmocpeB281
Cp4.1LG01g18290Cla003950Watermelon (97103) v1cpewmB442
Cp4.1LG01g18290Csa5G547590Cucumber (Chinese Long) v2cpecuB455
Cp4.1LG01g18290MELO3C005277Melon (DHL92) v3.5.1cpemeB347
Cp4.1LG01g18290ClCG01G006500Watermelon (Charleston Gray)cpewcgB373
Cp4.1LG01g18290CSPI05G18710Wild cucumber (PI 183967)cpecpiB454
Cp4.1LG01g18290MELO3C005277.2Melon (DHL92) v3.6.1cpemedB407
Cp4.1LG01g18290CsaV3_5G028100Cucumber (Chinese Long) v3cpecucB0547
Cp4.1LG01g18290Bhi12G000814Wax gourdcpewgoB0494
Cp4.1LG01g18290CsGy5G018720Cucumber (Gy14) v2cgybcpeB651
Cp4.1LG01g18290Carg23727Silver-seed gourdcarcpeB1319
Cp4.1LG01g18290Carg26059Silver-seed gourdcarcpeB0600
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG01g18290Cp4.1LG13g03520Cucurbita pepo (Zucchini)cpecpeB200
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g18290Cucumber (Gy14) v1cgycpeB0737
Cp4.1LG01g18290Cucurbita maxima (Rimu)cmacpeB310
Cp4.1LG01g18290Cucurbita moschata (Rifu)cmocpeB273
Cp4.1LG01g18290Wild cucumber (PI 183967)cpecpiB422
Cp4.1LG01g18290Wild cucumber (PI 183967)cpecpiB444
Cp4.1LG01g18290Cucumber (Chinese Long) v2cpecuB424
Cp4.1LG01g18290Cucumber (Chinese Long) v2cpecuB443
Cp4.1LG01g18290Bottle gourd (USVL1VR-Ls)cpelsiB311
Cp4.1LG01g18290Bottle gourd (USVL1VR-Ls)cpelsiB315
Cp4.1LG01g18290Watermelon (Charleston Gray)cpewcgB370
Cp4.1LG01g18290Watermelon (97103) v1cpewmB440
Cp4.1LG01g18290Melon (DHL92) v3.5.1cpemeB353
Cp4.1LG01g18290Cucumber (Gy14) v2cgybcpeB634
Cp4.1LG01g18290Melon (DHL92) v3.6.1cpemedB412
Cp4.1LG01g18290Cucumber (Chinese Long) v3cpecucB0526
Cp4.1LG01g18290Wax gourdcpewgoB0491