Carg26059 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg26059
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ubiquitin-conjugating enzyme E2
Location	Cucurbita_argyrosperma_scaffold_258 : 180169 .. 185120 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGGAACGGCAGTGATCTGCAGGTGCAGGGGAAGTACCATAGGCTGCGAAGCACATGACTACTCTGCTTTTTGCCTCTTCCGAGTACCGAACAGTAGTTGACTCCTTAATTATTTCTTGTGTTACTCCGTCTCTCTCTCTCTCTCTCATCTATCTTCTATCGCACGCTTTCTCTCTCTTACAGTTAAGTTTGGGAGCCCTAGCTCAGACACCGATCGTCTAAAATGGGTGACGAGGCCGAGAAGGTAGTCGGTGAGTCTTTGAAACCCCAATCTATCCGATTCCACAATTCGATAATTTCTATCTTGTTAGGTTTTTTCTTCTTTCTGATGCGAATTCTGATTCTGCAACGCCTTTTTTTGTTTGTTCTTTTTCGGGATGTTGGAGTTTGTTCTGTTCGGGAATCAACTTTTATTATGATTTTTCACTCTCTCGCCAATGTTTGGCAATTACGTTAGTGAATTTGGAAATATTGTGCTTGGGATATGCTTGGATTTTTTTTGTTTACTCCAAATTGGAAGAGTGTGGTGATATGGATGGATGAGACTATTTTCGTTTCATTTTCTTTTCATTTTCTAATTGAAGTAATCATTTGGTTCGCTTTATCTTATGTTGTCTGCTTTACATTGGATAGATACATTTTGAAAATGAATCTATTTGTTTAGTTTCCGTTGCTATCTTCATGTTATTTCTTCAACAATCTGTAATTTGTTCTTCGAAAGATTGTGGTGGTTTGAGGACAGTAAATGACGATGTATGAGAACTCTTCATACATCTTAATGAATTTTTTTCACCTTGTTCAAAGAAGTTTATAATTGTTGCACCATGAGATCTAATTTTGTTTATTTGTTATTATCATTTTTACAGTTCCCCGAAACTTCAGATTACTGGAAGAACTTGAAAGAGGTGAAAAAGGAATCGGGGATGGAACTGTGAGTTATGGAATGGATGATGCTGATGATATCTATATGGCGTCTTGGACGGGAACAATTATAGGGCCACCTAATGTAAGTTAATTTTTCATCCATTTTGTTCATTTCTTATTGTCTCTGATGACATCTGGGTCGACTGCTATAAATATTGATATGGATAGTTTCAAAGAATGATGGAAATATCATACTCTAAAGAGTATTGTTAACTTTGTTATCATCAAAATTTAGATAATTGAATTTTTGGGAAATGTAGTTACATAACTAAGTTTCGTCTTTACCTTGAAAATTCATCACAAAAGAAAATTGGTATTTTTTAGTATCTTTCTCATATTGATGAAAATGAGCATTGCAGCATCATTGCGTTGGTTGGAGTTGATGTATTCTTCTTTATTATTGTTGTTGTCGGGGAGAGCGCGAATAGAATTGTAAATTGAATCGTTGTTTTCTTGCTTTTCAGACTGTTCATGAAGGACGGATTTATCAACTCAAGCTATTCTGTGGACAGGATTATCCTGATAATCCTCCCAGCGTGAGATTTCAAACTCGGATTAATATGACCTGTGTCAATCCAGAAACTGGTGTGGTATGTGATGATTTTGTGAAACACTTACTGCATTGTGAAGAAAATAAATTAACAGCTTAGCTGAATGACTAGGTGGAACCAAGCCTTTTCCCCATGCTATCTAATTGGCAAAGGGAGCATACAATGGAGGACATATTAATGCAATTGAAGAAAGAAATGACTTCTCCCCAGAACAGGAGACTAAGTCAGCCTTCTGAAGGTGAGTTTATTCATTTATTCACTTCTCATTATGGACAGCACACCCCTCTCGTTAGTACATACAGCAGATTGAATAGATTTGCATGCTTGAGAAACTATATCTTATTAAAAAAATGTACCTGAGGGAATATGAGATTTGTTTCATCCTGTCGAGAGGGGTATAACCAAGAAGGCTATGCAGTGAAGGAGGTTCAGAGATGACACTCAAGATCTACATGCAAAAATGATTTGAGAGAGTATGTTAATTTGATACTAGCAATCTAGCTATATCCCAAAACATCTAGGTTCCCGCATTCTGTCTTCAAAATTGTGTGGTTTCGTTTTTCGCTCTCACCTCCTACAAGATCACTTTCATGGCATTAACTTTTAGACTTCAGTTTTGTATGAAGTTATGGCTTCAAAGAGTTGGAAATAGCCTGTTTGCTATCCTGAGGAAACACCATTGCAATCCATATCTATCCAACAATCTAAACGGGCAGGATGAATTGGGAGGGCAAGAAAATAAAAGGTGGTCTTGGTCTTCCAAACATCTATACATTAACGTGTCATTTAAGAGTCAAAGCTAGGCTTGGGAATTCCATCCTAATTCTGTCTCTTGTGTAACTACGCTCCGGCACTAAAGTGCAAGGGAAGGACTTTCTGGCATTCGTATGCTATTGAGAGGATGGTGTTAATGTGAAAGCTGTTTGAAAAGGACTTACAAGTGAATTGGCTTGACATATCCAAGGTTCAATTCCATAACCTTGGTGCTGGTTGGGTTCAGTTAAAAAGAGCAGCCCACTTCTGGTCTCTGCTTCAAATAGGGTTCTGTGAAATTTACTTTCAGGAACCTTCATCACTGAGCCATTGTTAGTTTATGAATAATTCTTTGGAACTCTACCAACCCATAGTCTATGGTAAATAATAGGAAATGTCTGTTCTTCAAACGATATGCTTTCCAAAACATAACTCTATCCTCTCTGGTCATTAACTTTCAAGGATAATCCTGTTTCCTGAATGCATATAGAAGAAATATGCATTCAAGAACTTGGGACAGTGAGAACTTACGGTTTTCAGCCTCTTGATCAAGCCCATATGAACTGATAGAAAATTTAACCCATAAAGGTTATGCCTTTGAATTAAACACTCATCTCCATTTCGACATCAAAGCTGTATTTGTGTTCTTTAGGCCTCCTCTCTCAGGATTACCTCTTTCAACAAGAATGGAAACCTCCCGTCCCACTAGGTGATAACTTTTAATTTCTGTTCTTCTCTTAAATTTCCAAGGCATATTGAATTTAAGAAAGAGGGTATGGGGATATGCTTGAAGGAACAGAGATTTCAGAAGCATTATTCTGCGTTGGGAGTATGTAACTTGCTTCATTTAAACATCCTCCGTGGTCTCTCAAAATCTATGGGCTCGTCCAGACTCCAGATGGCACACCCAAGTAAAGACAGTAGCCTCCTAATTAGTCGAGAAGGACAAGTGCATGTGAGAGGCCAGAGGGAGGCTCAAAGTAGGAATTTTCTGCATGATAGCCCTATTTAATTCATTTATTTTCTGTTAAATTGTGGAATGGTAACTGTTCACCCTAGGGAGCTAAGAATCACATATACGAATATGAGATACAAATACAATACAATACAACACATACACTACAATGTCATTTTGTATAAATCTAGGACATGGACATGTTTATTAAAATATACGTTTTTAAAATATGTATCATTTCAATACAAGGCAATTCAAAGTCCGTTTGTGTATGCATGGATATGAAAAGAATGATTTTGATGTATTTCACTCCCAAAATTTATTATTACATGTCAATTTAGTATACTTAATAAATGTTATATATGTGTTTAACAAATGCTGGATCTATATTGACTTTAGTGCAACTAATGTCTAACACATCTGCGTCCAACAAGTTTTGGAGCATCTAAATGTCCGACATATGTTGGACATGGACAAGCTAGCCAAACTGATGTATTTGTGCTTATTATACCTATGGAATCAAGATCTTTCACAACCACTCGGTTTTGGAGAAAGTGAAAAATAAGAGACTTTGGGATCAAATCAATAGTGGCTACCTAGCTAGCATGTGTTTTCTAACAACCAAATATCTTTGAGTTGGGTAAGATAAGATCGATCAGGCTATGTGTGAATAGGTCTGGATAGGGTCACGAATGCCAAAAATACTGCTGCAGGGTTTGTCCAACAATAAACACAATTCAATGATCTGACGAGGAGAGCTTGAAGAATCAAAGCGAAAGTCCTAATCTTTCATAACTCTGTTTCACATCATGCAACGGACTGTTTAAATTAGAGGATTTTTATAGAGCTGTTAGTGGTGCTGGCATATCAGGCGTGACACTTCAGTGTCATCCATCAGGTGGGTTCATGAGATGTCTTCCAGTGGTACCATATATGGAAAGCATGAAGAACTTTAACTATCTGTCCTTGACAGAGCTCCGTCTTGTTAAAGTGACATCATTTGGTCGAATCTGATAAACCGTACCAGTGGGGACTATTTTTAGATGTCTCGTTACTTTGGAGTGGCTGTGGCTTCTGCTAGTGAAGTTCGATCATGATTCTTAAAATGTTTTAAGGCCCATTCAGTTGCTTGTCTTGTGATGTCTTCAACTTCCATAATATCTTTCCTGTCAACTACACACTGGCTAGTAATTAAGTGTGGAGAACTTACTTGTTGCAGGTAATGAAGATGGACGAGTAGACCAAAAGGGGCTAGTGTTGAAATGTTGCATTCTTTAAAGGTAAAAGGCCAACAACTAAGATATTGTAAATAAGCTGATGTTACTATTTGAGCAACATGCTTTTTGTCTACACGTATTTGAATGAATGAATGAATGAAGTTGAGTTGTGCTCCATTAAGTGAGATGTTTGTCAGAATATCAATATCTTCTTCTCTGCTATTATTTGCTTGTAGCCTTCCTTTTGGACACCCCATTAACGAGGCTGTTCTGAAAGATCATCAAAAGACATAAAAGTGAAAAGGAATCAACCAAAATCTGTGTAGATTCTGTTCCCCACTAACCCTTCCCTATCTGCATTCTCTCAACTTTTAATTCAATGTTAGTGACAAAAATGAAGAACTTTGTAGCTTTATTCTATTCCTACTTCCATTATTGTCCGAGATTTCAGATTGTTGCATGTACATGCATAGAATTCGAATGACCTCTTTCAACTTTTGGTTCTTGTCTTGCTCTGGTTTTAACTTAATGATTTGTTTAGTTTTTTTTTT

mRNA sequence

AATGGAACGGCAGTGATCTGCAGGTGCAGGGGAAGTACCATAGGCTGCGAAGCACATGACTACTCTGCTTTTTGCCTCTTCCGAGTACCGAACAGTAGTTGACTCCTTAATTATTTCTTGTGTTACTCCGTCTCTCTCTCTCTCTCTCATCTATCTTCTATCGCACGCTTTCTCTCTCTTACAGTTAAGTTTGGGAGCCCTAGCTCAGACACCGATCGTCTAAAATGGGTGACGAGGCCGAGAAGGTAGTCGTTCCCCGAAACTTCAGATTACTGGAAGAACTTGAAAGAGGTGAAAAAGGAATCGGGGATGGAACTGTGAGTTATGGAATGGATGATGCTGATGATATCTATATGGCGTCTTGGACGGGAACAATTATAGGGCCACCTAATACTGTTCATGAAGGACGGATTTATCAACTCAAGCTATTCTGTGGACAGGATTATCCTGATAATCCTCCCAGCGTGAGATTTCAAACTCGGATTAATATGACCTGTGTCAATCCAGAAACTGGTGTGGTGGAACCAAGCCTTTTCCCCATGCTATCTAATTGGCAAAGGGAGCATACAATGGAGGACATATTAATGCAATTGAAGAAAGAAATGACTTCTCCCCAGAACAGGAGACTAAGTCAGCCTTCTGAAGGTAATGAAGATGGACGAGTAGACCAAAAGGGGCTAGTGTTGAAATGTTGCATTCTTTAAAGGTAAAAGGCCAACAACTAAGATATTGTAAATAAGCTGATGTTACTATTTGAGCAACATGCTTTTTGTCTACACGTATTTGAATGAATGAATGAATGAAGTTGAGTTGTGCTCCATTAAGTGAGATGTTTGTCAGAATATCAATATCTTCTTCTCTGCTATTATTTGCTTGTAGCCTTCCTTTTGGACACCCCATTAACGAGGCTGTTCTGAAAGATCATCAAAAGACATAAAAGTGAAAAGGAATCAACCAAAATCTGTGTAGATTCTGTTCCCCACTAACCCTTCCCTATCTGCATTCTCTCAACTTTTAATTCAATGTTAGTGACAAAAATGAAGAACTTTGTAGCTTTATTCTATTCCTACTTCCATTATTGTCCGAGATTTCAGATTGTTGCATGTACATGCATAGAATTCGAATGACCTCTTTCAACTTTTGGTTCTTGTCTTGCTCTGGTTTTAACTTAATGATTTGTTTAGTTTTTTTTTT

Coding sequence (CDS)

ATGGGTGACGAGGCCGAGAAGGTAGTCGTTCCCCGAAACTTCAGATTACTGGAAGAACTTGAAAGAGGTGAAAAAGGAATCGGGGATGGAACTGTGAGTTATGGAATGGATGATGCTGATGATATCTATATGGCGTCTTGGACGGGAACAATTATAGGGCCACCTAATACTGTTCATGAAGGACGGATTTATCAACTCAAGCTATTCTGTGGACAGGATTATCCTGATAATCCTCCCAGCGTGAGATTTCAAACTCGGATTAATATGACCTGTGTCAATCCAGAAACTGGTGTGGTGGAACCAAGCCTTTTCCCCATGCTATCTAATTGGCAAAGGGAGCATACAATGGAGGACATATTAATGCAATTGAAGAAAGAAATGACTTCTCCCCAGAACAGGAGACTAAGTCAGCCTTCTGAAGGTAATGAAGATGGACGAGTAGACCAAAAGGGGCTAGTGTTGAAATGTTGCATTCTTTAA

Protein sequence

MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDILMQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL

Homology

[Close]

BLAST of Carg26059 vs. NCBI nr
Match: XP_022964925.1 (ubiquitin-conjugating enzyme E2 variant 1B isoform X1 [Cucurbita moschata] >XP_022964933.1 ubiquitin-conjugating enzyme E2 variant 1B isoform X1 [Cucurbita moschata] >XP_022964940.1 ubiquitin-conjugating enzyme E2 variant 1B isoform X1 [Cucurbita moschata] >XP_023540973.1 ubiquitin-conjugating enzyme E2 variant 1B isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 336.3 bits (861), Expect = 5.8e-89
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0


Query: 1   MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE
Sbjct: 1   MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 120
           GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL
Sbjct: 61  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 120

Query: 121 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 160
           MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL
Sbjct: 121 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 159

[Close]

BLAST of Carg26059 vs. NCBI nr
Match: XP_022990021.1 (ubiquitin-conjugating enzyme E2 variant 1B-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 334.0 bits (855), Expect = 2.9e-88
Identity = 158/159 (99.37%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MGDEA KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE
Sbjct: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 120
           GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL
Sbjct: 61  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 120

Query: 121 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 160
           MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL
Sbjct: 121 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 159

[Close]

BLAST of Carg26059 vs. NCBI nr
Match: XP_016903717.1 (PREDICTED: uncharacterized protein LOC103483035 [Cucumis melo])

HSP 1 Score: 330.1 bits (845), Expect = 4.1e-87
Identity = 154/159 (96.86%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MGDEA KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE
Sbjct: 565 MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 624

Query: 61  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 120
           GRIYQLKLFCGQDYPDNPP+VRFQTR+NMTCVNPETGVVEPSLFPML+NWQREHTMEDIL
Sbjct: 625 GRIYQLKLFCGQDYPDNPPNVRFQTRVNMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 684

Query: 121 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 160
           MQLKKEMTSPQNRRLSQPSEGNEDGR+DQKGLVLKCCIL
Sbjct: 685 MQLKKEMTSPQNRRLSQPSEGNEDGRMDQKGLVLKCCIL 723

[Close]

BLAST of Carg26059 vs. NCBI nr
Match: KGN51442.1 (hypothetical protein Csa_5G547590 [Cucumis sativus])

HSP 1 Score: 328.2 bits (840), Expect = 1.6e-86
Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MGDEA KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE
Sbjct: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 120
           GRIYQLKLFCGQDYPDNPP+VRFQTRINMTCVN ETGVVEPSLFPML+NWQREHTMEDIL
Sbjct: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNSETGVVEPSLFPMLANWQREHTMEDIL 120

Query: 121 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 160
           MQLKKEMTSPQNRRLSQPSEGNEDGR+DQKGLVLKCCIL
Sbjct: 121 MQLKKEMTSPQNRRLSQPSEGNEDGRIDQKGLVLKCCIL 159

[Close]

BLAST of Carg26059 vs. NCBI nr
Match: XP_011656243.1 (PREDICTED: zinc finger protein VAR3, chloroplastic [Cucumis sativus])

HSP 1 Score: 328.2 bits (840), Expect = 1.6e-86
Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MGDEA KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE
Sbjct: 521 MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 580

Query: 61  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 120
           GRIYQLKLFCGQDYPDNPP+VRFQTRINMTCVN ETGVVEPSLFPML+NWQREHTMEDIL
Sbjct: 581 GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNSETGVVEPSLFPMLANWQREHTMEDIL 640

Query: 121 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 160
           MQLKKEMTSPQNRRLSQPSEGNEDGR+DQKGLVLKCCIL
Sbjct: 641 MQLKKEMTSPQNRRLSQPSEGNEDGRIDQKGLVLKCCIL 679

[Close]

BLAST of Carg26059 vs. TAIR10
Match: AT1G70660.1 (MMS ZWEI homologue 2)

HSP 1 Score: 275.8 bits (704), Expect = 1.7e-74
Identity = 125/159 (78.62%), Postives = 144/159 (90.57%), Query Frame = 0


Query: 1   MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MG E EKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDI M SWTGTI+GP NT +E
Sbjct: 1   MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60

Query: 61  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 120
           G+I+QLKLFCG+DYP++PP+VRFQ+RINM CVNPE GVV+PS FPMLSNW+RE TMED+L
Sbjct: 61  GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLL 120

Query: 121 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 160
           +QLKKEM S QNR+L+QP EGNE+GR D KGLV+KCC++
Sbjct: 121 IQLKKEMMSSQNRKLAQPLEGNEEGRTDPKGLVVKCCVM 159

[Close]

BLAST of Carg26059 vs. TAIR10
Match: AT1G23260.1 (MMS ZWEI homologue 1)

HSP 1 Score: 268.5 bits (685), Expect = 2.7e-72
Identity = 122/159 (76.73%), Postives = 142/159 (89.31%), Query Frame = 0


Query: 1   MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           M  E  KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYM SWTGTI+GPPNT +E
Sbjct: 1   MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYE 60

Query: 61  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 120
           G+I+QLKLFCG++YP++PP+VRFQTRINM CVNPETGVVEPSLFPML+NW+RE+TMEDIL
Sbjct: 61  GKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDIL 120

Query: 121 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 160
           ++LKKEM +  NR+L+QP EGNE+ R D KG   KCC++
Sbjct: 121 VKLKKEMMTSHNRKLAQPPEGNEEARADPKG-PAKCCVM 158

[Close]

BLAST of Carg26059 vs. TAIR10
Match: AT3G52560.4 (ubiquitin E2 variant 1D-4)

HSP 1 Score: 222.2 bits (565), Expect = 2.2e-58
Identity = 107/159 (67.30%), Postives = 121/159 (76.10%), Query Frame = 0


Query: 1   MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPN---- 60
           +G     VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DDIYM SWTGTIIGP N    
Sbjct: 3   LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNIMPL 62

Query: 61  --------------TVHEGRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPS 120
                         TVHEGRIYQLKLFC +DYP+ PP+VRF +R+NM CVN ETGVV+P 
Sbjct: 63  LLLLVVTEINFMSQTVHEGRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPK 122

Query: 121 LFPMLSNWQREHTMEDILMQLKKEMTSPQNRRLSQPSEG 142
            F +L+NWQRE+TMEDIL+QLKKEM++  NR+L QP EG
Sbjct: 123 KFGLLANWQREYTMEDILVQLKKEMSTSHNRKLVQPPEG 161

[Close]

BLAST of Carg26059 vs. TAIR10
Match: AT2G36060.2 (MMS ZWEI homologue 3)

HSP 1 Score: 221.9 bits (564), Expect = 2.9e-58
Identity = 105/135 (77.78%), Postives = 117/135 (86.67%), Query Frame = 0


Query: 8   VVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPN-TVHEGRIYQL 67
           VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DDIYM SWTGTIIGP N TVHEGRIYQL
Sbjct: 9   VVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNVTVHEGRIYQL 68

Query: 68  KLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDILMQLKKE 127
           KLFC +DYP+ PP+VRF +RINMTCVN +TGVV+   F +L+NWQR++TMEDIL QLKKE
Sbjct: 69  KLFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLKKE 128

Query: 128 MTSPQNRRLSQPSEG 142
           M +  NR+L QP EG
Sbjct: 129 MAASHNRKLVQPPEG 143

[Close]

BLAST of Carg26059 vs. TAIR10
Match: AT3G46460.1 (ubiquitin-conjugating enzyme 13)

HSP 1 Score: 60.5 bits (145), Expect = 1.1e-09
Identity = 40/136 (29.41%), Postives = 69/136 (50.74%), Query Frame = 0


Query: 33  SYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLFCGQDYPDNPPSVRFQTRINMTCV 92
           S G+ D  +I+   W+ TIIGPP+T++EG  +   +   Q+YP++PP+VRF + I    V
Sbjct: 25  SAGLVDEKNIF--EWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNV 84

Query: 93  NPETGVV---------EPSLFPMLS-NWQREHTMEDILMQLKKEMTSPQNRRLSQPSEGN 152
            P+  V          +PS + + S  W   HT+E I++ +   ++ P +   +      
Sbjct: 85  YPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAK 144

Query: 153 E--DGRVDQKGLVLKC 157
           E  + R + K  V +C
Sbjct: 145 EWREKRDEFKKKVSRC 158

[Close]

BLAST of Carg26059 vs. Swiss-Prot
Match: sp|Q9CAB6|UEV1B_ARATH (Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana OX=3702 GN=UEV1B PE=1 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 3.0e-73
Identity = 125/159 (78.62%), Postives = 144/159 (90.57%), Query Frame = 0


Query: 1   MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MG E EKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDI M SWTGTI+GP NT +E
Sbjct: 1   MGSEEEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDILMQSWTGTILGPHNTAYE 60

Query: 61  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 120
           G+I+QLKLFCG+DYP++PP+VRFQ+RINM CVNPE GVV+PS FPMLSNW+RE TMED+L
Sbjct: 61  GKIFQLKLFCGKDYPESPPTVRFQSRINMACVNPENGVVDPSHFPMLSNWRREFTMEDLL 120

Query: 121 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 160
           +QLKKEM S QNR+L+QP EGNE+GR D KGLV+KCC++
Sbjct: 121 IQLKKEMMSSQNRKLAQPLEGNEEGRTDPKGLVVKCCVM 159

[Close]

BLAST of Carg26059 vs. Swiss-Prot
Match: sp|Q93YP0|UEV1A_ARATH (Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana OX=3702 GN=UEV1A PE=1 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 4.8e-71
Identity = 122/159 (76.73%), Postives = 142/159 (89.31%), Query Frame = 0


Query: 1   MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           M  E  KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYM SWTGTI+GPPNT +E
Sbjct: 1   MSSEEAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTILGPPNTAYE 60

Query: 61  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 120
           G+I+QLKLFCG++YP++PP+VRFQTRINM CVNPETGVVEPSLFPML+NW+RE+TMEDIL
Sbjct: 61  GKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPMLTNWRREYTMEDIL 120

Query: 121 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 160
           ++LKKEM +  NR+L+QP EGNE+ R D KG   KCC++
Sbjct: 121 VKLKKEMMTSHNRKLAQPPEGNEEARADPKG-PAKCCVM 158

[Close]

BLAST of Carg26059 vs. Swiss-Prot
Match: sp|Q9SVD7|UEV1D_ARATH (Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana OX=3702 GN=UEV1D PE=1 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.7e-60
Identity = 107/141 (75.89%), Postives = 121/141 (85.82%), Query Frame = 0


Query: 1   MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           +G     VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DDIYM SWTGTIIGP NTVHE
Sbjct: 3   LGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHE 62

Query: 61  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 120
           GRIYQLKLFC +DYP+ PP+VRF +R+NM CVN ETGVV+P  F +L+NWQRE+TMEDIL
Sbjct: 63  GRIYQLKLFCDKDYPEKPPTVRFHSRVNMACVNHETGVVDPKKFGLLANWQREYTMEDIL 122

Query: 121 MQLKKEMTSPQNRRLSQPSEG 142
           +QLKKEM++  NR+L QP EG
Sbjct: 123 VQLKKEMSTSHNRKLVQPPEG 143

[Close]

BLAST of Carg26059 vs. Swiss-Prot
Match: sp|Q9SJ44|UEV1C_ARATH (Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana OX=3702 GN=UEV1C PE=1 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 2.1e-58
Identity = 105/134 (78.36%), Postives = 117/134 (87.31%), Query Frame = 0


Query: 8   VVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLK 67
           VVVPRNFRLLEELERGEKGIGDGTVSYGMDD DDIYM SWTGTIIGP NTVHEGRIYQLK
Sbjct: 9   VVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLK 68

Query: 68  LFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDILMQLKKEM 127
           LFC +DYP+ PP+VRF +RINMTCVN +TGVV+   F +L+NWQR++TMEDIL QLKKEM
Sbjct: 69  LFCDKDYPEKPPTVRFHSRINMTCVNHDTGVVDSKKFGVLANWQRQYTMEDILTQLKKEM 128

Query: 128 TSPQNRRLSQPSEG 142
            +  NR+L QP EG
Sbjct: 129 AASHNRKLVQPPEG 142

[Close]

BLAST of Carg26059 vs. Swiss-Prot
Match: sp|Q54D06|UBE2V_DICDI (Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum OX=44689 GN=ube2v PE=3 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 6.2e-42
Identity = 74/132 (56.06%), Postives = 101/132 (76.52%), Query Frame = 0


Query: 10  VPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHEGRIYQLKLF 69
           +PRNF LLEELE GEK  GDGT+SYG++  DDI ++SW GTIIGP NT  + R Y LKL+
Sbjct: 4   IPRNFVLLEELESGEKSTGDGTISYGLESPDDILLSSWIGTIIGPQNTPFDNRFYSLKLY 63

Query: 70  CGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDILMQLKKEMTS 129
           C +DYP+ PP+VRF T+IN+ CVN + GVV+P   P+LSNW  ++ +++IL +L++EM+S
Sbjct: 64  CDKDYPNKPPTVRFTTKINIGCVNQQNGVVDPKNLPILSNWTSKNRIQNILSELRREMSS 123

Query: 130 PQNRRLSQPSEG 142
             N++L QP EG
Sbjct: 124 SSNKKLVQPPEG 135

[Close]

BLAST of Carg26059 vs. TrEMBL
Match: tr|A0A1S4E671|A0A1S4E671_CUCME (uncharacterized protein LOC103483035 OS=Cucumis melo OX=3656 GN=LOC103483035 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 2.7e-87
Identity = 154/159 (96.86%), Postives = 158/159 (99.37%), Query Frame = 0


Query: 1   MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MGDEA KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE
Sbjct: 565 MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 624

Query: 61  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 120
           GRIYQLKLFCGQDYPDNPP+VRFQTR+NMTCVNPETGVVEPSLFPML+NWQREHTMEDIL
Sbjct: 625 GRIYQLKLFCGQDYPDNPPNVRFQTRVNMTCVNPETGVVEPSLFPMLANWQREHTMEDIL 684

Query: 121 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 160
           MQLKKEMTSPQNRRLSQPSEGNEDGR+DQKGLVLKCCIL
Sbjct: 685 MQLKKEMTSPQNRRLSQPSEGNEDGRMDQKGLVLKCCIL 723

[Close]

BLAST of Carg26059 vs. TrEMBL
Match: tr|A0A0A0KSP5|A0A0A0KSP5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G547590 PE=4 SV=1)

HSP 1 Score: 328.2 bits (840), Expect = 1.0e-86
Identity = 154/159 (96.86%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MGDEA KVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE
Sbjct: 1   MGDEAAKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 120
           GRIYQLKLFCGQDYPDNPP+VRFQTRINMTCVN ETGVVEPSLFPML+NWQREHTMEDIL
Sbjct: 61  GRIYQLKLFCGQDYPDNPPNVRFQTRINMTCVNSETGVVEPSLFPMLANWQREHTMEDIL 120

Query: 121 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 160
           MQLKKEMTSPQNRRLSQPSEGNEDGR+DQKGLVLKCCIL
Sbjct: 121 MQLKKEMTSPQNRRLSQPSEGNEDGRIDQKGLVLKCCIL 159

[Close]

BLAST of Carg26059 vs. TrEMBL
Match: tr|A0A2P4K007|A0A2P4K007_QUESU (Ubiquitin-conjugating enzyme e2 variant 1b OS=Quercus suber OX=58331 GN=CFP56_51116 PE=4 SV=1)

HSP 1 Score: 308.1 bits (788), Expect = 1.1e-80
Identity = 143/159 (89.94%), Postives = 149/159 (93.71%), Query Frame = 0


Query: 1   MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MG E   VVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYM SWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 120
           GRIYQLKLFCG+DYPDNPP+VRFQTRINMTCVN ETGVVEPSLFPML+NWQREHTMEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPTVRFQTRINMTCVNQETGVVEPSLFPMLANWQREHTMEDIL 120

Query: 121 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 160
            QLKKEM SPQNR+LSQP EGNE+GR DQKGLVLKCCI+
Sbjct: 121 TQLKKEMMSPQNRKLSQPPEGNEEGRTDQKGLVLKCCIM 159

[Close]

BLAST of Carg26059 vs. TrEMBL
Match: tr|A0A2I4DK85|A0A2I4DK85_9ROSI (ubiquitin-conjugating enzyme E2 variant 1A-like OS=Juglans regia OX=51240 GN=LOC108980955 PE=4 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 7.2e-80
Identity = 140/159 (88.05%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 1   MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MG E  +VVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYM SWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSRVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 120
           GRIYQLKLFCG+DYPDNPPSVRFQTRINMTC+N ETGVVEPSLFPMLSNWQRE++MEDIL
Sbjct: 61  GRIYQLKLFCGKDYPDNPPSVRFQTRINMTCINQETGVVEPSLFPMLSNWQREYSMEDIL 120

Query: 121 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 160
            QLKKEM SPQNR+L+QP EGNE+GR+DQKGLVL+CCI+
Sbjct: 121 TQLKKEMASPQNRKLTQPPEGNEEGRMDQKGLVLRCCIM 159

[Close]

BLAST of Carg26059 vs. TrEMBL
Match: tr|A5B7Q8|A5B7Q8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0011g05630 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 2.1e-79
Identity = 141/159 (88.68%), Postives = 148/159 (93.08%), Query Frame = 0


Query: 1   MGDEAEKVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMASWTGTIIGPPNTVHE 60
           MG E   VVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYM SWTGTIIGPPNTVHE
Sbjct: 1   MGSEGSGVVVPRNFRLLEELERGEKGIGDGTVSYGMDDADDIYMQSWTGTIIGPPNTVHE 60

Query: 61  GRIYQLKLFCGQDYPDNPPSVRFQTRINMTCVNPETGVVEPSLFPMLSNWQREHTMEDIL 120
           GRIYQLKLFCGQDYPDNPP+V+FQTRINMTCVN ETGVVEPSLFPML+ WQREHTMEDIL
Sbjct: 61  GRIYQLKLFCGQDYPDNPPTVKFQTRINMTCVNQETGVVEPSLFPMLATWQREHTMEDIL 120

Query: 121 MQLKKEMTSPQNRRLSQPSEGNEDGRVDQKGLVLKCCIL 160
            QLKKEM SPQNR+L+QP EGNE+ R+DQKGLVLKCCIL
Sbjct: 121 TQLKKEMMSPQNRKLAQPPEGNEEARIDQKGLVLKCCIL 159

The following BLAST results are available for this feature:

BLAST of Carg26059 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022964925.1	5.8e-89	100.00	ubiquitin-conjugating enzyme E2 variant 1B isoform X1 [Cucurbita moschata] >XP_0...	[more]
XP_022990021.1	2.9e-88	99.37	ubiquitin-conjugating enzyme E2 variant 1B-like isoform X2 [Cucurbita maxima]	[more]
XP_016903717.1	4.1e-87	96.86	PREDICTED: uncharacterized protein LOC103483035 [Cucumis melo]	[more]
KGN51442.1	1.6e-86	96.86	hypothetical protein Csa_5G547590 [Cucumis sativus]	[more]
XP_011656243.1	1.6e-86	96.86	PREDICTED: zinc finger protein VAR3, chloroplastic [Cucumis sativus]	[more]

BLAST of Carg26059 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G70660.1	1.7e-74	78.62	MMS ZWEI homologue 2	[more]
AT1G23260.1	2.7e-72	76.73	MMS ZWEI homologue 1	[more]
AT3G52560.4	2.2e-58	67.30	ubiquitin E2 variant 1D-4	[more]
AT2G36060.2	2.9e-58	77.78	MMS ZWEI homologue 3	[more]
AT3G46460.1	1.1e-09	29.41	ubiquitin-conjugating enzyme 13	[more]

BLAST of Carg26059 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9CAB6\|UEV1B_ARATH	3.0e-73	78.62	Ubiquitin-conjugating enzyme E2 variant 1B OS=Arabidopsis thaliana OX=3702 GN=UE...	[more]
sp\|Q93YP0\|UEV1A_ARATH	4.8e-71	76.73	Ubiquitin-conjugating enzyme E2 variant 1A OS=Arabidopsis thaliana OX=3702 GN=UE...	[more]
sp\|Q9SVD7\|UEV1D_ARATH	1.7e-60	75.89	Ubiquitin-conjugating enzyme E2 variant 1D OS=Arabidopsis thaliana OX=3702 GN=UE...	[more]
sp\|Q9SJ44\|UEV1C_ARATH	2.1e-58	78.36	Ubiquitin-conjugating enzyme E2 variant 1C OS=Arabidopsis thaliana OX=3702 GN=UE...	[more]
sp\|Q54D06\|UBE2V_DICDI	6.2e-42	56.06	Probable ubiquitin-conjugating enzyme E2 variant OS=Dictyostelium discoideum OX=...	[more]

BLAST of Carg26059 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E671\|A0A1S4E671_CUCME	2.7e-87	96.86	uncharacterized protein LOC103483035 OS=Cucumis melo OX=3656 GN=LOC103483035 PE=...	[more]
tr\|A0A0A0KSP5\|A0A0A0KSP5_CUCSA	1.0e-86	96.86	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G547590 PE=4 SV=1	[more]
tr\|A0A2P4K007\|A0A2P4K007_QUESU	1.1e-80	89.94	Ubiquitin-conjugating enzyme e2 variant 1b OS=Quercus suber OX=58331 GN=CFP56_51...	[more]
tr\|A0A2I4DK85\|A0A2I4DK85_9ROSI	7.2e-80	88.05	ubiquitin-conjugating enzyme E2 variant 1A-like OS=Juglans regia OX=51240 GN=LOC...	[more]
tr\|A5B7Q8\|A5B7Q8_VITVI	2.1e-79	88.68	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_01s0011g05630 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR000608	UBQ-conjugat_E2
IPR016135	UBQ-conjugating_enzyme/RWD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg26059-RA	Carg26059-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 14..158 e-value: 1.1E-14 score: 64.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 127..146
None	No IPR available	PANTHER	PTHR43915:SF4	UBIQUITIN-CONJUGATING ENZYME E2 VARIANT 1D	coord: 5..141
None	No IPR available	PANTHER	PTHR43915	FAMILY NOT NAMED	coord: 5..141
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	G3DSA:3.10.110.10		coord: 1..144 e-value: 2.6E-62 score: 210.9
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	SSF54495	UBC-like	coord: 9..141
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 41..134 e-value: 3.9E-16 score: 58.9
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 14..138 score: 18.422

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg26059	Cla003950	Watermelon (97103) v1	carwmB0424
Carg26059	Csa5G547590	Cucumber (Chinese Long) v2	carcuB0460
Carg26059	MELO3C005277	Melon (DHL92) v3.5.1	carmeB0435
Carg26059	ClCG01G006500	Watermelon (Charleston Gray)	carwcgB0420
Carg26059	Cucsa.012160	Cucumber (Gy14) v1	carcgyB0493
Carg26059	CmaCh15G009760	Cucurbita maxima (Rimu)	carcmaB0594
Carg26059	CmaCh04G021100	Cucurbita maxima (Rimu)	carcmaB0595
Carg26059	CmoCh04G022110	Cucurbita moschata (Rifu)	carcmoB0580
Carg26059	CmoCh15G010230	Cucurbita moschata (Rifu)	carcmoB0579
Carg26059	Cp4.1LG01g18290	Cucurbita pepo (Zucchini)	carcpeB0600
Carg26059	Cp4.1LG13g03520	Cucurbita pepo (Zucchini)	carcpeB0599
Carg26059	CsGy5G018720	Cucumber (Gy14) v2	carcgybB0436
Carg26059	MELO3C005277.2	Melon (DHL92) v3.6.1	carmedB0437
Carg26059	CsaV3_5G028100	Cucumber (Chinese Long) v3	carcucB0461
Carg26059	Cla97C01G006810	Watermelon (97103) v2	carwmbB0451
Carg26059	Bhi12G000814	Wax gourd	carwgoB0513

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg26059	Carg23727	Silver-seed gourd	carcarB440

The following block(s) are covering this gene:


Gene	Organism	Block
Carg26059	Silver-seed gourd	carcarB229
Carg26059	Cucumber (Gy14) v2	carcgybB0437
Carg26059	Cucumber (Gy14) v2	carcgybB0435
Carg26059	Cucumber (Gy14) v1	carcgyB0494
Carg26059	Cucumber (Gy14) v1	carcgyB0495
Carg26059	Cucurbita maxima (Rimu)	carcmaB0593
Carg26059	Cucurbita moschata (Rifu)	carcmoB0578
Carg26059	Wild cucumber (PI 183967)	carcpiB0464
Carg26059	Wild cucumber (PI 183967)	carcpiB0465
Carg26059	Cucumber (Chinese Long) v2	carcuB0459
Carg26059	Cucumber (Chinese Long) v2	carcuB0461
Carg26059	Cucumber (Chinese Long) v3	carcucB0460
Carg26059	Bottle gourd (USVL1VR-Ls)	carlsiB387
Carg26059	Bottle gourd (USVL1VR-Ls)	carlsiB388
Carg26059	Melon (DHL92) v3.5.1	carmeB0436
Carg26059	Melon (DHL92) v3.6.1	carmedB0438
Carg26059	Watermelon (Charleston Gray)	carwcgB0419
Carg26059	Watermelon (97103) v1	carwmB0423
Carg26059	Watermelon (97103) v2	carwmbB0450
Carg26059	Wax gourd	carwgoB0512