Cp4.1LG01g17330 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCTAGCATCTGTTGATGGAAGATCAAAGCTAAACCCGAACGCCCCACTTTTCATCCCGGCTGCATACCAGGTGGAGGATTTCTCCCCGCAATGGTGGCAATTGGTCACAACCTCGACATGGTACCGCGATTACTGGCTCAGCCAACACCAGGAAGACAGTGACTTCTACATGGACGGCGAAGATGATTTCAGCAACGACATTGCTGATTTTTTGCCAGAGGCATTCGATCTCGACGCAAACGAAGAACTGCGCACCATGGAAGCTGAATTTGAGGAGTTCATTCAAGCTTCCCTTACTGAAGGGTACCACCTCGAGGAGTAG ATGGCTCTAGCATCTGTTGATGGAAGATCAAAGCTAAACCCGAACGCCCCACTTTTCATCCCGGCTGCATACCAGGTGGAGGATTTCTCCCCGCAATGGTGGCAATTGGTCACAACCTCGACATGGTACCGCGATTACTGGCTCAGCCAACACCAGGAAGACAGTGACTTCTACATGGACGGCGAAGATGATTTCAGCAACGACATTGCTGATTTTTTGCCAGAGGCATTCGATCTCGACGCAAACGAAGAACTGCGCACCATGGAAGCTGAATTTGAGGAGTTCATTCAAGCTTCCCTTACTGAAGGGTACCACCTCGAGGAGTAG ATGGCTCTAGCATCTGTTGATGGAAGATCAAAGCTAAACCCGAACGCCCCACTTTTCATCCCGGCTGCATACCAGGTGGAGGATTTCTCCCCGCAATGGTGGCAATTGGTCACAACCTCGACATGGTACCGCGATTACTGGCTCAGCCAACACCAGGAAGACAGTGACTTCTACATGGACGGCGAAGATGATTTCAGCAACGACATTGCTGATTTTTTGCCAGAGGCATTCGATCTCGACGCAAACGAAGAACTGCGCACCATGGAAGCTGAATTTGAGGAGTTCATTCAAGCTTCCCTTACTGAAGGGTACCACCTCGAGGAGTAG MALASVDGRSKLNPNAPLFIPAAYQVEDFSPQWWQLVTTSTWYRDYWLSQHQEDSDFYMDGEDDFSNDIADFLPEAFDLDANEELRTMEAEFEEFIQASLTEGYHLEE
BLAST of Cp4.1LG01g17330 vs. Swiss-Prot
Match: ERD15_ARATH (Protein EARLY RESPONSIVE TO DEHYDRATION 15 OS=Arabidopsis thaliana GN=ERD15 PE=1 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 1.4e-21 Identity = 59/99 (59.60%), Postives = 73/99 (73.74%), Query Frame = 1
BLAST of Cp4.1LG01g17330 vs. Swiss-Prot
Match: CID2_ARATH (Polyadenylate-binding protein-interacting protein 2 OS=Arabidopsis thaliana GN=CID2 PE=2 SV=1) HSP 1 Score: 74.3 bits (181), Expect = 9.0e-13 Identity = 45/98 (45.92%), Postives = 56/98 (57.14%), Query Frame = 1
BLAST of Cp4.1LG01g17330 vs. TrEMBL
Match: Q6ELF8_CUCSA (Poly(A)-binding protein C-terminal interacting protein 243 OS=Cucumis sativus GN=Csa_4G214830 PE=2 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 1.9e-49 Identity = 100/110 (90.91%), Postives = 105/110 (95.45%), Query Frame = 1
BLAST of Cp4.1LG01g17330 vs. TrEMBL
Match: W9S851_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015513 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 1.5e-30 Identity = 70/104 (67.31%), Postives = 82/104 (78.85%), Query Frame = 1
BLAST of Cp4.1LG01g17330 vs. TrEMBL
Match: A0A067K1V9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22456 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 1.6e-29 Identity = 68/105 (64.76%), Postives = 84/105 (80.00%), Query Frame = 1
BLAST of Cp4.1LG01g17330 vs. TrEMBL
Match: A0A061EXG3_THECC (Dehydration-induced protein, putative OS=Theobroma cacao GN=TCM_024484 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 3.6e-29 Identity = 70/101 (69.31%), Postives = 81/101 (80.20%), Query Frame = 1
BLAST of Cp4.1LG01g17330 vs. TrEMBL
Match: B9SVS1_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0255020 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 8.1e-29 Identity = 71/111 (63.96%), Postives = 82/111 (73.87%), Query Frame = 1
BLAST of Cp4.1LG01g17330 vs. TAIR10
Match: AT2G41430.1 (AT2G41430.1 dehydration-induced protein (ERD15)) HSP 1 Score: 103.6 bits (257), Expect = 7.8e-23 Identity = 59/99 (59.60%), Postives = 73/99 (73.74%), Query Frame = 1
BLAST of Cp4.1LG01g17330 vs. TAIR10
Match: AT4G14270.1 (AT4G14270.1 Protein containing PAM2 motif which mediates interaction with the PABC domain of polyadenyl binding proteins.) HSP 1 Score: 74.3 bits (181), Expect = 5.1e-14 Identity = 45/98 (45.92%), Postives = 56/98 (57.14%), Query Frame = 1
BLAST of Cp4.1LG01g17330 vs. NCBI nr
Match: gi|525507437|ref|NP_001267508.1| (protein EARLY RESPONSIVE TO DEHYDRATION 15-like [Cucumis sativus]) HSP 1 Score: 203.0 bits (515), Expect = 2.7e-49 Identity = 100/110 (90.91%), Postives = 105/110 (95.45%), Query Frame = 1
BLAST of Cp4.1LG01g17330 vs. NCBI nr
Match: gi|703123054|ref|XP_010102715.1| (hypothetical protein L484_015513 [Morus notabilis]) HSP 1 Score: 140.2 bits (352), Expect = 2.1e-30 Identity = 70/104 (67.31%), Postives = 82/104 (78.85%), Query Frame = 1
BLAST of Cp4.1LG01g17330 vs. NCBI nr
Match: gi|802725118|ref|XP_012085962.1| (PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15 [Jatropha curcas]) HSP 1 Score: 136.7 bits (343), Expect = 2.4e-29 Identity = 68/105 (64.76%), Postives = 84/105 (80.00%), Query Frame = 1
BLAST of Cp4.1LG01g17330 vs. NCBI nr
Match: gi|590635295|ref|XP_007028595.1| (Dehydration-induced protein, putative [Theobroma cacao]) HSP 1 Score: 135.6 bits (340), Expect = 5.2e-29 Identity = 70/101 (69.31%), Postives = 81/101 (80.20%), Query Frame = 1
BLAST of Cp4.1LG01g17330 vs. NCBI nr
Match: gi|255578451|ref|XP_002530090.1| (PREDICTED: protein EARLY RESPONSIVE TO DEHYDRATION 15 [Ricinus communis]) HSP 1 Score: 134.4 bits (337), Expect = 1.2e-28 Identity = 71/111 (63.96%), Postives = 82/111 (73.87%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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