Cp4.1LG01g14300 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g14300
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionCopper chaperone
LocationCp4.1LG01 : 7689750 .. 7692235 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTTATAATTATTATAAATTTCGGTTGACCCGACCCATTAGACAGAGTCTATTAAAGCCCCGTGAAAGCCCGGCAAAACCCAGTAGCGCAGAGATCGGCGAGGGCGAATTTTCGATTGCATTTTCGTTCGTTTCTCTTCTGAATTTCTGTAATCTGTAACGATGTCTCAGGTACGCTACGAATCTATGGGTTATTTGTTCGTGTATCCGATTGTTGAAGATTCATTTCCATTTTTCATCCTTATCTTTTGTTTTTGTTTTTCTCTCTCCGTTTCTCGTATGATTTGGAGATCGAAGATACGCAAGCTTTTTCTTTTTGAAATTCAAATCTGCAGCTCGGAGGACGAATCGTTTGTTTCGATTGAATTATAAGGATTTTTTTTGAAAATTTTTCAATCGATAACTTATCGGATGTTTTTATGCGCAAAAAGAAATCGTAAAAGCCACAGTGATGAAAAAACTGCTCGCGCGAGTGTTGATATCTTGCATAAATTGTACTTATTTCGCGATTCGGACTTGCACATGCTCAAGTCTTCTAGCATTTTGACTTTTTTCTTTTCATCTACTTCCCTGAGGATTTATGCATTTGGTTTTTCATTTAATGTGAATCTGACACGAGTGAGGGAAATCACTGTAACCGAGCCAATGAGATCTACTTCTGAGAGAGCTCCATAGAAGTATTTCGTTAGTATCGCATATTGATTTATTGGTTAGCAATTGGTCAATCAATCACAAAGGAAGCTTTACGTTGATCATATATTGATAATTTGTTTGGCCATTGATGAATGTTTTCCCGATTAACCAAATTAGAACGTTCTGCTCTATTTTGTGCGTTTTTTTTTTTAATTTTTAATCTATGTTAATTTTGGAAGCTGGAGTTGTTGAAAAACAGGGAGAATATTTATGGATATAACTCATGGATACAAGTCCCATTAGATAGACTTGGATGAGTAAATTTCTGTTTTGGAATTGGATAAAAGACCGTTGATATTAAGTACTCTTGTCCTGTTAAGTGCTAACTATTTCTTGGTATCAGGCAGTCCGTATTCCACTCTTCTCTTCTAGCTGAGTTCTTCGATCCCTATTAATAAACACAGTTTGGAATTTGTTTTTGTGCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAGGGCTGTGTTGGAGCCGTCAAAAGGGTCTTGGGGAAACTGGAAGGTTTGTTATTCCTTTGCTAAATTTTAGTTGTCTCATGATGTGCTGTGCTCTTGTTTGATGTGTAATCTATGTATTGAAGCATGAGGGTCGAGTTTTGGAGTTCGATATTGCATGTTTCAACATTTTGTACTCTGTAGAACGGTAACAAGTTCTGGATTAAGAGTAATACTTAGCTGCAAAATTGGCTGTAACCATTTTTCTTGTAATCCAGTCCAGCCATAGTGGAAAAAATAAGCTTAAAAAAAAATCAAATTTGCTAGAACGTTCTCCCGCAACAATCAGAGTTTGACTTAGACAAGTTCATGATATTCAGAGCGAAGGGACATTGCTTACAACTCAAAAGGACGGTGAAATATGTTAGTTTACTTGCTTACTTGTTAGAGTCAGGCTTATTCTACTGTATCTCCCCCAGAAAACCCTCGATCTCCAAGCCCCTTGTATAGGTTGGGCAAGTTTGGATGCCCCTACTCCCAACAAGCCACAAGATTGGGATGCAAGAAAAGATTGCAGCCACAACTAGCAGCTAAGGCATTACTCTTTCACTAATATATAGACTTTTGAACGCGTAAACCACTTTTGCATATTGGGAAATGCTGGACATAATATGCTTGATGACCATGCGTCAACTTTTAAAGTGAATACTTGAATGATGCTTGGTGGGTATTAAATCTATCAATATTCCGAAATCGAGTACCCTTTAGTCTAATCTCATAAACCTTTGTTATTACCAATTCAATATGAACCCTCTGAACAAATAACTAGTTCCTACTCAAAGTGCTTGGCTACCATGTTCAGGTGTCGAAACATTTGACATCGACATAGATGCACAAAAGGTGACTGTGAAAGGCAATGTGAGTCGCGATGTAGTTTTCCAAACCGTTTCGAAAACTGGGAAGAAGACTGCCTACTGGGAAGACGACGCCCCAGCAGCATCTGCTCAGACTGTGGCTGCTGCTTAAAATTTACTCCATGGAAATTTGCTGTTCATTGCGTAAGGTCTTTGCTTCCTGAAGCTAATAATGTTGTAATAGTACGTGAACTTGGCAATTTAGTCTTGTAATATTTTTATTGGAGCGTCTTTTGCATGACCTTCTACCTTAAAACTTATCTTTATTCTACAGATACGTTTTTGTTTTGCCCCAATTGTTTGTTCATTTTGACCTTTGCTTTTGAGATGATTGATGATTTAATGAAGAATGCCTTCCATGGCTTCTTGTTGTTGAATTCTTTGGTTTGTTGATTGTTTATGAGCAATTCTAGCAAGGAGGCTCGCCTGACTTGCACGTGCTTCA

mRNA sequence

TTTTATAATTATTATAAATTTCGGTTGACCCGACCCATTAGACAGAGTCTATTAAAGCCCCGTGAAAGCCCGGCAAAACCCAGTAGCGCAGAGATCGGCGAGGGCGAATTTTCGATTGCATTTTCGTTCGTTTCTCTTCTGAATTTCTGTAATCTGTAACGATGTCTCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAGGGCTGTGTTGGAGCCGTCAAAAGGGTCTTGGGGAAACTGGAAGGTGTCGAAACATTTGACATCGACATAGATGCACAAAAGGTGACTGTGAAAGGCAATGTGAGTCGCGATGTAGTTTTCCAAACCGTTTCGAAAACTGGGAAGAAGACTGCCTACTGGGAAGACGACGCCCCAGCAGCATCTGCTCAGACTGTGGCTGCTGCTTAAAATTTACTCCATGGAAATTTGCTGTTCATTGCGTAAGGTCTTTGCTTCCTGAAGCTAATAATGTTGTAATAGTACGTGAACTTGGCAATTTAGTCTTGTAATATTTTTATTGGAGCGTCTTTTGCATGACCTTCTACCTTAAAACTTATCTTTATTCTACAGATACGTTTTTGTTTTGCCCCAATTGTTTGTTCATTTTGACCTTTGCTTTTGAGATGATTGATGATTTAATGAAGAATGCCTTCCATGGCTTCTTGTTGTTGAATTCTTTGGTTTGTTGATTGTTTATGAGCAATTCTAGCAAGGAGGCTCGCCTGACTTGCACGTGCTTCA

Coding sequence (CDS)

ATGTCTCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAGGGCTGTGTTGGAGCCGTCAAAAGGGTCTTGGGGAAACTGGAAGGTGTCGAAACATTTGACATCGACATAGATGCACAAAAGGTGACTGTGAAAGGCAATGTGAGTCGCGATGTAGTTTTCCAAACCGTTTCGAAAACTGGGAAGAAGACTGCCTACTGGGAAGACGACGCCCCAGCAGCATCTGCTCAGACTGTGGCTGCTGCTTAA

Protein sequence

MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA
Homology
[Close]
BLAST of Cp4.1LG01g14300 vs. Swiss-Prot
Match: CCH_ARATH (Copper transport protein CCH OS=Arabidopsis thaliana GN=CCH PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.3e-24
Identity = 56/73 (76.71%), Postives = 62/73 (84.93%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNV  + VFQTVSKT
Sbjct: 1  MAQTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKT 60

Query: 61 GKKTAYWEDDAPA 74
          GKKT+YW  +A A
Sbjct: 61 GKKTSYWPVEAEA 73

[Close]
BLAST of Cp4.1LG01g14300 vs. Swiss-Prot
Match: ATOX1_ARATH (Copper transport protein ATX1 OS=Arabidopsis thaliana GN=ATX1 PE=1 SV=2)

HSP 1 Score: 112.5 bits (280), Expect = 2.3e-24
Identity = 55/76 (72.37%), Postives = 64/76 (84.21%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          MSQT VL+VAM+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNV  D V QTV+KT
Sbjct: 1  MSQTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKT 60

Query: 61 GKKTAYWEDDAPAASA 77
          GKKTA+WE +   A A
Sbjct: 61 GKKTAFWEAEGETAKA 76

[Close]
BLAST of Cp4.1LG01g14300 vs. Swiss-Prot
Match: ATOX1_CANLF (Copper transport protein ATOX1 OS=Canis lupus familiaris GN=ATOX1 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.5e-07
Identity = 29/58 (50.00%), Postives = 39/58 (67.24%), Query Frame = 1 

Query: 9  VAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAY 67
          V M+C+GC  AV RVL KL GVE FDID+  +KV +    S D++ +T+ KTGK  +Y
Sbjct: 8  VDMTCEGCSNAVSRVLNKLGGVE-FDIDLPNKKVCINSEHSVDILLETLEKTGKAVSY 64

[Close]
BLAST of Cp4.1LG01g14300 vs. Swiss-Prot
Match: ATOX1_BOVIN (Copper transport protein ATOX1 OS=Bos taurus GN=ATOX1 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 9.5e-07
Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = 1 

Query: 9  VAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAY 67
          V M+C+GC  AV RVL KL GV+ FDID+  +KV +    S D + +T+ KTGK  +Y
Sbjct: 8  VDMTCEGCSNAVTRVLNKLGGVQ-FDIDLPNKKVCINSEHSVDTLLETLGKTGKAVSY 64

[Close]
BLAST of Cp4.1LG01g14300 vs. Swiss-Prot
Match: ATOX1_SHEEP (Copper transport protein ATOX1 OS=Ovis aries GN=ATOX1 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 9.5e-07
Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = 1 

Query: 9  VAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAY 67
          V M+C+GC  AV RVL KL GV+ FDID+  +KV +    S D + +T+ KTGK  +Y
Sbjct: 8  VDMTCEGCSNAVTRVLNKLGGVQ-FDIDLPNKKVCINSEHSVDTLLETLGKTGKAVSY 64

[Close]
BLAST of Cp4.1LG01g14300 vs. TrEMBL
Match: A0A0A0KTF7_CUCSA (Copper chaperone OS=Cucumis sativus GN=Csa_5G615220 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 5.1e-31
Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVET+DIDIDAQKVTVKGNV RDVVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETYDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDDAPAASAQTVAAA 83
          GKKTAYWE+DA AA A T A A
Sbjct: 61 GKKTAYWEEDASAAPAATPAPA 82

[Close]
BLAST of Cp4.1LG01g14300 vs. TrEMBL
Match: A9PCL8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s24290g PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.7e-24
Identity = 63/85 (74.12%), Postives = 71/85 (83.53%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          MSQT VLKV MSC+GCVGAVKRVLGK+EGVE++DID+  QKVTVKGNV  D V QTVSKT
Sbjct: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKT 60

Query: 61 GKKTAYWEDDA---PAASAQTVAAA 83
          GKKTA+WE +A   PA  A+TVAAA
Sbjct: 61 GKKTAFWEAEAPAEPAKPAETVAAA 85

[Close]
BLAST of Cp4.1LG01g14300 vs. TrEMBL
Match: A9PIL5_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.7e-24
Identity = 63/85 (74.12%), Postives = 71/85 (83.53%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          MSQT VLKV MSC+GCVGAVKRVLGK+EGVE++DID+  QKVTVKGNV  D V QTVSKT
Sbjct: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKT 60

Query: 61 GKKTAYWEDDA---PAASAQTVAAA 83
          GKKTA+WE +A   PA  A+TVAAA
Sbjct: 61 GKKTAFWEAEAPAEPAKPAETVAAA 85

[Close]
BLAST of Cp4.1LG01g14300 vs. TrEMBL
Match: Q6J338_9ROSI (Copper chaperone OS=Populus alba x Populus glandulosa GN=CCH PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.7e-24
Identity = 63/85 (74.12%), Postives = 71/85 (83.53%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          MSQT VLKV MSC+GCVGAVKRVLGK+EGVE++DID+  QKVTVKGNV  D V QTVSKT
Sbjct: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKT 60

Query: 61 GKKTAYWEDDA---PAASAQTVAAA 83
          GKKTA+WE +A   PA  A+TVAAA
Sbjct: 61 GKKTAFWEAEAPAEPAKPAETVAAA 85

[Close]
BLAST of Cp4.1LG01g14300 vs. TrEMBL
Match: A0A0A1EP68_9ROSI (ATX2 OS=Populus simonii x Populus nigra GN=ATX2 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.7e-24
Identity = 63/85 (74.12%), Postives = 71/85 (83.53%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          MSQT VLKV MSC+GCVGAVKRVLGK+EGVE++DID+  QKVTVKGNV  D V QTVSKT
Sbjct: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKT 60

Query: 61 GKKTAYWEDDA---PAASAQTVAAA 83
          GKKTA+WE +A   PA  A+TVAAA
Sbjct: 61 GKKTAFWEAEAPAEPAKPAETVAAA 85

[Close]
BLAST of Cp4.1LG01g14300 vs. TAIR10
Match: AT3G56240.1 (AT3G56240.1 copper chaperone)

HSP 1 Score: 112.5 bits (280), Expect = 1.3e-25
Identity = 56/73 (76.71%), Postives = 62/73 (84.93%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNV  + VFQTVSKT
Sbjct: 1  MAQTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKT 60

Query: 61 GKKTAYWEDDAPA 74
          GKKT+YW  +A A
Sbjct: 61 GKKTSYWPVEAEA 73

[Close]
BLAST of Cp4.1LG01g14300 vs. TAIR10
Match: AT1G66240.1 (AT1G66240.1 homolog of anti-oxidant 1)

HSP 1 Score: 112.5 bits (280), Expect = 1.3e-25
Identity = 55/76 (72.37%), Postives = 64/76 (84.21%), Query Frame = 1 

Query: 1   MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
           MSQT VL+VAM+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNV  D V QTV+KT
Sbjct: 31  MSQTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKT 90

Query: 61  GKKTAYWEDDAPAASA 77
           GKKTA+WE +   A A
Sbjct: 91  GKKTAFWEAEGETAKA 106

[Close]
BLAST of Cp4.1LG01g14300 vs. TAIR10
Match: AT3G56891.1 (AT3G56891.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 1.8e-11
Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 1 

Query: 7  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAY 66
          L V M C+GC   V+R + KL+GV+T +ID+D QKVTV G V R+ V + V +TG+   Y
Sbjct: 20 LLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRTAEY 79

Query: 67 W 68
          W
Sbjct: 80 W 80

[Close]
BLAST of Cp4.1LG01g14300 vs. TAIR10
Match: AT5G27690.1 (AT5G27690.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 4.4e-10
Identity = 26/64 (40.62%), Postives = 43/64 (67.19%), Query Frame = 1 

Query: 4  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKK 63
          T VL+V++ C+GC   +K++L K++GV T +ID+  QKVTV GNV  +++ + + K G+ 
Sbjct: 31 TWVLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRH 90

Query: 64 TAYW 68
             W
Sbjct: 91 AELW 94

[Close]
BLAST of Cp4.1LG01g14300 vs. TAIR10
Match: AT5G19090.1 (AT5G19090.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 7.5e-10
Identity = 31/65 (47.69%), Postives = 40/65 (61.54%), Query Frame = 1 

Query: 3  QTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGK 62
          QT VLKV + C GC   VK++L K+EGV T  ID +  KVTV GNV   V+ + + K+GK
Sbjct: 10 QTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSGK 69

Query: 63 KTAYW 68
              W
Sbjct: 70 HAEIW 74

[Close]
BLAST of Cp4.1LG01g14300 vs. NCBI nr
Match: gi|659091856|ref|XP_008446769.1| (PREDICTED: copper transport protein CCH-like [Cucumis melo])

HSP 1 Score: 142.9 bits (359), Expect = 2.5e-31
Identity = 75/82 (91.46%), Postives = 76/82 (92.68%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAVKRVLGKLEGV+TFDIDIDAQKVTVKGNV RDVVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVDTFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDDAPAASAQTVAAA 83
          GKKTAYWEDDA AA A T A A
Sbjct: 61 GKKTAYWEDDASAAPAATPAPA 82

[Close]
BLAST of Cp4.1LG01g14300 vs. NCBI nr
Match: gi|449465551|ref|XP_004150491.1| (PREDICTED: copper transport protein CCH [Cucumis sativus])

HSP 1 Score: 141.4 bits (355), Expect = 7.2e-31
Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVET+DIDIDAQKVTVKGNV RDVVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETYDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDDAPAASAQTVAAA 83
          GKKTAYWE+DA AA A T A A
Sbjct: 61 GKKTAYWEEDASAAPAATPAPA 82

[Close]
BLAST of Cp4.1LG01g14300 vs. NCBI nr
Match: gi|470145863|ref|XP_004308552.1| (PREDICTED: copper transport protein ATX1-like, partial [Fragaria vesca subsp. vesca])

HSP 1 Score: 122.5 bits (306), Expect = 3.5e-25
Identity = 66/85 (77.65%), Postives = 71/85 (83.53%), Query Frame = 1 

Query: 2   SQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTG 61
           SQTTVLKV MSCQGCVGAVKRVLGKLEGVE++DID DAQKVTVKGNV  + V QTVSKTG
Sbjct: 26  SQTTVLKVGMSCQGCVGAVKRVLGKLEGVESYDIDFDAQKVTVKGNVPAETVLQTVSKTG 85

Query: 62  KKTAYWEDDAP----AASAQTVAAA 83
           KKTAYWE +AP    A  A+ VAAA
Sbjct: 86  KKTAYWEAEAPAEPEAKPAEAVAAA 110

[Close]
BLAST of Cp4.1LG01g14300 vs. NCBI nr
Match: gi|970059722|ref|XP_015056610.1| (PREDICTED: copper transport protein ATX1-like [Solanum pennellii])

HSP 1 Score: 119.8 bits (299), Expect = 2.3e-24
Identity = 59/73 (80.82%), Postives = 64/73 (87.67%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          MSQT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNV  + VFQTVSKT
Sbjct: 1  MSQTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKT 60

Query: 61 GKKTAYWEDDAPA 74
          GKKT+YWE+ APA
Sbjct: 61 GKKTSYWEEPAPA 73

[Close]
BLAST of Cp4.1LG01g14300 vs. NCBI nr
Match: gi|566192520|ref|XP_002315448.2| (hypothetical protein POPTR_0010s24290g [Populus trichocarpa])

HSP 1 Score: 119.0 bits (297), Expect = 3.9e-24
Identity = 63/85 (74.12%), Postives = 71/85 (83.53%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          MSQT VLKV MSC+GCVGAVKRVLGK+EGVE++DID+  QKVTVKGNV  D V QTVSKT
Sbjct: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKT 60

Query: 61 GKKTAYWEDDA---PAASAQTVAAA 83
          GKKTA+WE +A   PA  A+TVAAA
Sbjct: 61 GKKTAFWEAEAPAEPAKPAETVAAA 85

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g14300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CCH_ARATH2.3e-2476.71Copper transport protein CCH OS=Arabidopsis thaliana GN=CCH PE=1 SV=1[more]
ATOX1_ARATH2.3e-2472.37Copper transport protein ATX1 OS=Arabidopsis thaliana GN=ATX1 PE=1 SV=2[more]
ATOX1_CANLF1.5e-0750.00Copper transport protein ATOX1 OS=Canis lupus familiaris GN=ATOX1 PE=3 SV=1[more]
ATOX1_BOVIN9.5e-0748.28Copper transport protein ATOX1 OS=Bos taurus GN=ATOX1 PE=3 SV=1[more]
ATOX1_SHEEP9.5e-0748.28Copper transport protein ATOX1 OS=Ovis aries GN=ATOX1 PE=3 SV=1[more]
BLAST of Cp4.1LG01g14300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTF7_CUCSA5.1e-3190.24Copper chaperone OS=Cucumis sativus GN=Csa_5G615220 PE=4 SV=1[more]
A9PCL8_POPTR2.7e-2474.12Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s24290g PE=2 SV=1[more]
A9PIL5_9ROSI2.7e-2474.12Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2... [more]
Q6J338_9ROSI2.7e-2474.12Copper chaperone OS=Populus alba x Populus glandulosa GN=CCH PE=2 SV=1[more]
A0A0A1EP68_9ROSI2.7e-2474.12ATX2 OS=Populus simonii x Populus nigra GN=ATX2 PE=2 SV=1[more]
BLAST of Cp4.1LG01g14300 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G56240.11.3e-2576.71 copper chaperone[more]
AT1G66240.11.3e-2572.37 homolog of anti-oxidant 1[more]
AT3G56891.11.8e-1149.18 Heavy metal transport/detoxification superfamily protein [more]
AT5G27690.14.4e-1040.63 Heavy metal transport/detoxification superfamily protein [more]
AT5G19090.17.5e-1047.69 Heavy metal transport/detoxification superfamily protein [more]
BLAST of Cp4.1LG01g14300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659091856|ref|XP_008446769.1|2.5e-3191.46PREDICTED: copper transport protein CCH-like [Cucumis melo][more]
gi|449465551|ref|XP_004150491.1|7.2e-3190.24PREDICTED: copper transport protein CCH [Cucumis sativus][more]
gi|470145863|ref|XP_004308552.1|3.5e-2577.65PREDICTED: copper transport protein ATX1-like, partial [Fragaria vesca subsp. ve... [more]
gi|970059722|ref|XP_015056610.1|2.3e-2480.82PREDICTED: copper transport protein ATX1-like [Solanum pennellii][more]
gi|566192520|ref|XP_002315448.2|3.9e-2474.12hypothetical protein POPTR_0010s24290g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
Vocabulary: INTERPRO
TermDefinition
IPR006121HMA_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0030001 metal ion transport
biological_process GO:0007030 Golgi organization
biological_process GO:0046916 cellular transition metal ion homeostasis
biological_process GO:0009611 response to wounding
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0006598 polyamine catabolic process
biological_process GO:0009963 positive regulation of flavonoid biosynthetic process
biological_process GO:0009805 coumarin biosynthetic process
biological_process GO:0006825 copper ion transport
biological_process GO:0042398 cellular modified amino acid biosynthetic process
biological_process GO:0006878 cellular copper ion homeostasis
biological_process GO:0006816 calcium ion transport
cellular_component GO:0005575 cellular_component
cellular_component GO:0048046 apoplast
cellular_component GO:0009507 chloroplast
cellular_component GO:0005737 cytoplasm
molecular_function GO:0016531 copper chaperone activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0046914 transition metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g14300.1Cp4.1LG01g14300.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 6..63
score: 1.4
IPR006121Heavy metal-associated domain, HMAPROFILEPS50846HMA_2coord: 3..66
score: 13
IPR006121Heavy metal-associated domain, HMAunknownSSF55008HMA, heavy metal-associated domaincoord: 2..68
score: 7.33
NoneNo IPR availableGENE3DG3DSA:3.30.70.100coord: 2..68
score: 8.5
NoneNo IPR availablePANTHERPTHR22814COPPER TRANSPORT PROTEIN ATOX1-RELATEDcoord: 1..76
score: 3.3
NoneNo IPR availablePANTHERPTHR22814:SF73COPPER TRANSPORT PROTEIN CCHcoord: 1..76
score: 3.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g14300Cucsa.309040Cucumber (Gy14) v1cgycpeB0806
Cp4.1LG01g14300CmaCh18G009400Cucurbita maxima (Rimu)cmacpeB429
Cp4.1LG01g14300CmaCh04G014250Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g14300CmoCh04G015000Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g14300CmoCh18G009440Cucurbita moschata (Rifu)cmocpeB392
Cp4.1LG01g14300Cla020497Watermelon (97103) v1cpewmB427
Cp4.1LG01g14300Csa5G615220Cucumber (Chinese Long) v2cpecuB439
Cp4.1LG01g14300MELO3C012358Melon (DHL92) v3.5.1cpemeB363
Cp4.1LG01g14300ClCG05G021700Watermelon (Charleston Gray)cpewcgB388
Cp4.1LG01g14300CSPI05G26420Wild cucumber (PI 183967)cpecpiB439
Cp4.1LG01g14300Lsi04G001420Bottle gourd (USVL1VR-Ls)cpelsiB352
Cp4.1LG01g14300MELO3C012358.2Melon (DHL92) v3.6.1cpemedB423
Cp4.1LG01g14300CsaV3_5G035570Cucumber (Chinese Long) v3cpecucB0543
Cp4.1LG01g14300Bhi07G000645Wax gourdcpewgoB0569
Cp4.1LG01g14300CsGy5G025890Cucumber (Gy14) v2cgybcpeB648
Cp4.1LG01g14300Carg18984Silver-seed gourdcarcpeB1466
Cp4.1LG01g14300Carg01911Silver-seed gourdcarcpeB1177
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g14300Cucurbita pepo (Zucchini)cpecpeB040
Cp4.1LG01g14300Cucurbita pepo (Zucchini)cpecpeB379
Cp4.1LG01g14300Cucurbita maxima (Rimu)cmacpeB733
Cp4.1LG01g14300Cucurbita moschata (Rifu)cmocpeB689
Cp4.1LG01g14300Bottle gourd (USVL1VR-Ls)cpelsiB384
Cp4.1LG01g14300Watermelon (Charleston Gray)cpewcgB416
Cp4.1LG01g14300Watermelon (97103) v1cpewmB394