CmaCh18G009400 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh18G009400
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Metal ion binding protein
Location	Cma_Chr18 : 8061943 .. 8063936 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATCCAGTAGCGCAGAGATTGGCGAGGGCGAATTTTCCGAGTCTGTAATCTTTAACCATGTCTCAGGTACCGCCACGAATTTCTCGGAAATTTGTTCTTGAATGTAATTGTTAGAGATTCGCTTCACGTTTTTTGGCCTCGTTTTTTTGTTTCTTTTTCTCTCTCTGTCTCCCGTATGTTTTGGAGATCGAAGATACGTTGGTTTCTTCTTTTTAAACTATAAATCTGCTGTTTGGAGCATGAATCGTTGATTAAAATTGGCGTAGAAGGACTTGTGGATTTGTTTTGAAACATATTCAATCTATAGCGTCTCAGATCTTTATATGCTATAAGAAATGATGTGAAGCTACAGAGATGCAAGAGCTAATCACGCGATTGTTGATATCTTGTATAGTTCTTACTCATGTTGCGATTCAGACCTGCACATAGTTCAATTCTGCTAGCATTTTGTCATTTTTCCCATTCTTCTTCTTCTTCTTCCCTAAGGTCTTATGCCTTGGTTTTTCATTTGATGTGAATCTGACACCAGTGATGGAAACGACAGTAACCGAGCCAAATGAGGTCAAAGTCTGAGAGAGCTCCACAGAAGTATTTCTTTAGTATCGCTAATTGATCAACTTATTGGTTAATAATTTGTCAATCGATCACAAAGGAAGCTTTATCTTGATCGTATGTTAGATTCTGGTCATTGGTTTTGTATTTTTTTTTTTTTTTCCCGCTCTTCCAAGTTAGAATGTTCTGCTCTTTTTTTGTGTTTTGAATTATTAATCTATGTTATATTGGGAGCCAGACTTGTTGAAAAAACACTGAGAATATTTATTGATATCACTGACGGTATACAAGTCCCATATGATAGAATTGGATTATAGTAAATTTCTGCGAAGAATTTGATAAAGGACCGTTGATATTAAGCACTCTTGGACAAGTTATGAGATGAACTAACTCTTATTGCTTGGTATCAGGCAGTCTGTATTGCACCTTCCTCTTCTAGCTGAGTTCTATGATTCCATCTTTAATAAATACAGTTTGGAATTTGTTTCTGTGCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAAGGCTGTGTTGGAGCCGTCAGACGTGTCTTGGGAAAACTGGAAGGTTCGTCATTTCTTGGCTAAATTTTTGTCGTCTCATGATGTGCTCTTCTTTGATGTGTAATTTTCGTATCGGTTGGTGGGGTTGAGTTTGGTTTAGACATATATCCTAGACAAAGAGGTCAGAAGTTTGATCTTCACATCCCATAAATTCTGGACTAATACATGAACTCTTGAAAGTGTAAACGATATGCATGCTTGGTTAATTTTATTGCAAGCTTAGTTCTCTTTTATGTTTAAGATTTTTAGAATGAATTCTTGAGTGATGGTTAATAAATCAATCATTATTGCAAAATCGAGTATCCTTTAATCTAAACCCTTAGATTCTTGCTATTCCCAATTGAATATGAACATGAACTTAAGTGCTTGGCTACTATGTTCAGGAGTCGATGCATTTGACATCGACATTGATGCGCAAAAGGTGACTGTGAAAGGCAACGTGGAGCGCGATGTAGTTTTCCAAACTGTTTCCAAAACCGGGAAGAAGACTGCCTACTGGGAAGACGAAGCCCCAGCAGCAGCAGCAGCAGCAGCTGCCCCTGCACCGGCGGCGGCCCCAGCAGCAGCACCTGCACCGGTGGCAGCCCCAGCAGCGGCACCTGCACCAGAGGCGGCCCCAGCAGCAGCACCACCAGCTGAAGCAGAAGCTAAACCTGCCGAGAGTGTGGCTGCTGTTTAAAGTATTACACCTATTTACTAATGGAAATTTTCTGTTGAATGCATAAGGTCTTTGCTTGGTCAAGCTAATAATAATGATGTATTAGTACGTAAACTTGGCTTCTGAGTCTGTAATATTTTGACAAGTGCCTCTTGAATGGCCTTCTACATTAAAACTCAATTATAATCTACAGATATATTTTTGTTTTTGCCTCAA

mRNA sequence

AAATCCAGTAGCGCAGAGATTGGCGAGGGCGAATTTTCCGAGTCTGTAATCTTTAACCATGTCTCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAAGGCTGTGTTGGAGCCGTCAGACGTGTCTTGGGAAAACTGGAAGGAGTCGATGCATTTGACATCGACATTGATGCGCAAAAGGTGACTGTGAAAGGCAACGTGGAGCGCGATGTAGTTTTCCAAACTGTTTCCAAAACCGGGAAGAAGACTGCCTACTGGGAAGACGAAGCCCCAGCAGCAGCAGCAGCAGCAGCTGCCCCTGCACCGGCGGCGGCCCCAGCAGCAGCACCTGCACCGGTGGCAGCCCCAGCAGCGGCACCTGCACCAGAGGCGGCCCCAGCAGCAGCACCACCAGCTGAAGCAGAAGCTAAACCTGCCGAGAGTGTGGCTGCTGTTTAAAGTATTACACCTATTTACTAATGGAAATTTTCTGTTGAATGCATAAGGTCTTTGCTTGGTCAAGCTAATAATAATGATGTATTAGTACGTAAACTTGGCTTCTGAGTCTGTAATATTTTGACAAGTGCCTCTTGAATGGCCTTCTACATTAAAACTCAATTATAATCTACAGATATATTTTTGTTTTTGCCTCAA

Coding sequence (CDS)

ATGTCTCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAAGGCTGTGTTGGAGCCGTCAGACGTGTCTTGGGAAAACTGGAAGGAGTCGATGCATTTGACATCGACATTGATGCGCAAAAGGTGACTGTGAAAGGCAACGTGGAGCGCGATGTAGTTTTCCAAACTGTTTCCAAAACCGGGAAGAAGACTGCCTACTGGGAAGACGAAGCCCCAGCAGCAGCAGCAGCAGCAGCTGCCCCTGCACCGGCGGCGGCCCCAGCAGCAGCACCTGCACCGGTGGCAGCCCCAGCAGCGGCACCTGCACCAGAGGCGGCCCCAGCAGCAGCACCACCAGCTGAAGCAGAAGCTAAACCTGCCGAGAGTGTGGCTGCTGTTTAA

Protein sequence

MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEDEAPAAAAAAAAPAPAAAPAAAPAPVAAPAAAPAPEAAPAAAPPAEAEAKPAESVAAV

Homology

[Close]

BLAST of CmaCh18G009400 vs. Swiss-Prot
Match: ATOX1_ARATH (Copper transport protein ATX1 OS=Arabidopsis thaliana GN=ATX1 PE=1 SV=2)

HSP 1 Score: 109.8 bits (273), Expect = 2.2e-23
Identity = 54/76 (71.05%), Postives = 65/76 (85.53%), Query Frame = 1


Query: 1  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
          MSQT VL+VAM+C+GCVGAV+RVLGK+EGV++FD+DI  QKVTVKGNV+ D V QTV+KT
Sbjct: 1  MSQTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKT 60

Query: 61 GKKTAYWEDEAPAAAA 77
          GKKTA+WE E   A A
Sbjct: 61 GKKTAFWEAEGETAKA 76

[Close]

BLAST of CmaCh18G009400 vs. Swiss-Prot
Match: CCH_ARATH (Copper transport protein CCH OS=Arabidopsis thaliana GN=CCH PE=1 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 9.1e-17
Identity = 71/123 (57.72%), Postives = 79/123 (64.23%), Query Frame = 1


Query: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           M+QT VLKV MSCQGCVGAV RVLGK+EGV++FDIDI  QKVTVKGNVE + VFQTVSKT
Sbjct: 1   MAQTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKT 60

Query: 61  GKKTAYWEDEAPAAAAAAAAPAPAAAPAAAPAPVAAPAAAPAPEAAPAAAPP--AEAEAK 120
           GKKT+YW  EA A   A A P              A     A   A A   P  AEAE K
Sbjct: 61  GKKTSYWPVEAEAEPKAEADP---KVETVTETKTEAETKTEAKVDAKADVEPKAAEAETK 120

Query: 121 PAE 122
           P++
Sbjct: 121 PSQ 120

[Close]

BLAST of CmaCh18G009400 vs. Swiss-Prot
Match: HIP21_ARATH (Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana GN=HIPP21 PE=2 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 1.1e-06
Identity = 24/65 (36.92%), Postives = 40/65 (61.54%), Query Frame = 1


Query: 3  QTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKTGK 62
          QT  +KV M C GC   VR V+ +++GV + +++    ++TV G+V+ + V + V  TGK
Sbjct: 26 QTVDIKVKMDCDGCERRVRNVVRRMKGVKSVEVNRKQSRITVNGHVDPNKVLKRVKSTGK 85

Query: 63 KTAYW 68
          K  +W
Sbjct: 86 KAEFW 90

[Close]

BLAST of CmaCh18G009400 vs. Swiss-Prot
Match: ATOX1_CANLF (Copper transport protein ATOX1 OS=Canis lupus familiaris GN=ATOX1 PE=3 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 1.9e-06
Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = 1


Query: 9  VAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAY 67
          V M+C+GC  AV RVL KL GV+ FDID+  +KV +      D++ +T+ KTGK  +Y
Sbjct: 8  VDMTCEGCSNAVSRVLNKLGGVE-FDIDLPNKKVCINSEHSVDILLETLEKTGKAVSY 64

[Close]

BLAST of CmaCh18G009400 vs. Swiss-Prot
Match: ATOX1_SHEEP (Copper transport protein ATOX1 OS=Ovis aries GN=ATOX1 PE=3 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 7.3e-06
Identity = 27/58 (46.55%), Postives = 36/58 (62.07%), Query Frame = 1


Query: 9  VAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAY 67
          V M+C+GC  AV RVL KL GV  FDID+  +KV +      D + +T+ KTGK  +Y
Sbjct: 8  VDMTCEGCSNAVTRVLNKLGGVQ-FDIDLPNKKVCINSEHSVDTLLETLGKTGKAVSY 64

[Close]

BLAST of CmaCh18G009400 vs. TrEMBL
Match: A0A0A0KTF7_CUCSA (Copper chaperone OS=Cucumis sativus GN=Csa_5G615220 PE=4 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 1.6e-28
Identity = 84/126 (66.67%), Postives = 92/126 (73.02%), Query Frame = 1


Query: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           MSQTTVLKVAMSCQGCVGAV+RVLGKLEGV+ +DIDIDAQKVTVKGNVERDVVFQTVSKT
Sbjct: 1   MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETYDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61  GKKTAYWEDEAPAAAAAAAAPAPAAAPAAAPAPVAAPAAAPAPEAAPAAAPPAEAEAKPA 120
           GKKTAYWE++A            +AAPAA PA                   PAEAEAKPA
Sbjct: 61  GKKTAYWEEDA------------SAAPAATPA-------------------PAEAEAKPA 95

Query: 121 ESVAAV 127
           E +AA+
Sbjct: 121 EPLAAI 95

[Close]

BLAST of CmaCh18G009400 vs. TrEMBL
Match: M5XM30_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014090mg PE=4 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 2.3e-22
Identity = 64/85 (75.29%), Postives = 70/85 (82.35%), Query Frame = 1


Query: 2  SQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKTG 61
          SQTTVLKV MSCQGCVGAV+RVLGKLEGV+++DID DAQKVTVK N+  + V QTVSKTG
Sbjct: 3  SQTTVLKVGMSCQGCVGAVKRVLGKLEGVESYDIDFDAQKVTVKSNLPPETVLQTVSKTG 62

Query: 62 KKTAYWEDEAPAAAAAAAAPAPAAA 87
          KKTAYWE EAPA   A  A A AAA
Sbjct: 63 KKTAYWEAEAPAEPEAKPAEAVAAA 87

[Close]

BLAST of CmaCh18G009400 vs. TrEMBL
Match: D4P094_HEVBR (Copper transport protein ATOX1 OS=Hevea brasiliensis GN=CCH PE=2 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 3.9e-22
Identity = 54/73 (73.97%), Postives = 64/73 (87.67%), Query Frame = 1


Query: 1  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
          MSQT VLKV MSC+GCVGAV+RVLGK+EGV+++DID+  QKVTVKGNV+ + V QTVSKT
Sbjct: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPEAVLQTVSKT 60

Query: 61 GKKTAYWEDEAPA 74
          GKKT +WE EAPA
Sbjct: 61 GKKTTFWEAEAPA 73

[Close]

BLAST of CmaCh18G009400 vs. TrEMBL
Match: Q5ZF67_PLAMJ (Copper chaperone OS=Plantago major GN=cch1 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.6e-22
Identity = 74/123 (60.16%), Postives = 85/123 (69.11%), Query Frame = 1


Query: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           MSQT  LKV MSCQGCVGAV+RVLGK+EGV++FDIDI+ QKVTVKGNVE++ V QTVSKT
Sbjct: 1   MSQTVELKVGMSCQGCVGAVKRVLGKMEGVESFDIDIEKQKVTVKGNVEKEAVLQTVSKT 60

Query: 61  GKKTAYWEDEAPAAAAAAAAPAPAAAPAAAPAPVAAPAAAPAPEAAPAAAPPAEAEAKPA 120
           GKKT +W +EA           P A    APAPV        PEA P  AP AE E+KP 
Sbjct: 61  GKKTEFWPEEAAE---------PEAKITEAPAPV--------PEAKPTEAPAAEPESKPT 106

Query: 121 ESV 124
           E+V
Sbjct: 121 EAV 106

[Close]

BLAST of CmaCh18G009400 vs. TrEMBL
Match: M4CSN8_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 6.6e-22
Identity = 60/81 (74.07%), Postives = 66/81 (81.48%), Query Frame = 1


Query: 1  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
          MSQT VLKV MSCQGCVGAV RVLGK+EGV++FDIDI  QKVTVKGNVE + VFQTVSKT
Sbjct: 1  MSQTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKT 60

Query: 61 GKKTAYWEDEAPAAAAAAAAP 82
          GKKT+YW  EA A   + A P
Sbjct: 61 GKKTSYWPVEAEAEPKSVAEP 81

[Close]

BLAST of CmaCh18G009400 vs. TAIR10
Match: AT1G66240.1 (AT1G66240.1 homolog of anti-oxidant 1)

HSP 1 Score: 109.8 bits (273), Expect = 1.3e-24
Identity = 54/76 (71.05%), Postives = 65/76 (85.53%), Query Frame = 1


Query: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           MSQT VL+VAM+C+GCVGAV+RVLGK+EGV++FD+DI  QKVTVKGNV+ D V QTV+KT
Sbjct: 31  MSQTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKT 90

Query: 61  GKKTAYWEDEAPAAAA 77
           GKKTA+WE E   A A
Sbjct: 91  GKKTAFWEAEGETAKA 106

[Close]

BLAST of CmaCh18G009400 vs. TAIR10
Match: AT3G56240.1 (AT3G56240.1 copper chaperone)

HSP 1 Score: 87.8 bits (216), Expect = 5.2e-18
Identity = 71/123 (57.72%), Postives = 79/123 (64.23%), Query Frame = 1


Query: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           M+QT VLKV MSCQGCVGAV RVLGK+EGV++FDIDI  QKVTVKGNVE + VFQTVSKT
Sbjct: 1   MAQTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKT 60

Query: 61  GKKTAYWEDEAPAAAAAAAAPAPAAAPAAAPAPVAAPAAAPAPEAAPAAAPP--AEAEAK 120
           GKKT+YW  EA A   A A P              A     A   A A   P  AEAE K
Sbjct: 61  GKKTSYWPVEAEAEPKAEADP---KVETVTETKTEAETKTEAKVDAKADVEPKAAEAETK 120

Query: 121 PAE 122
           P++
Sbjct: 121 PSQ 120

[Close]

BLAST of CmaCh18G009400 vs. TAIR10
Match: AT3G56891.1 (AT3G56891.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 9.4e-12
Identity = 31/61 (50.82%), Postives = 41/61 (67.21%), Query Frame = 1


Query: 7  LKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAY 66
          L V M C+GC   VRR + KL+GVD  +ID+D QKVTV G V+R+ V + V +TG+   Y
Sbjct: 20 LLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRTAEY 79

Query: 67 W 68
          W
Sbjct: 80 W 80

[Close]

BLAST of CmaCh18G009400 vs. TAIR10
Match: AT5G27690.1 (AT5G27690.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-09
Identity = 25/64 (39.06%), Postives = 43/64 (67.19%), Query Frame = 1


Query: 4  TTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKTGKK 63
          T VL+V++ C+GC   ++++L K++GV   +ID+  QKVTV GNVE +++ + + K G+ 
Sbjct: 31 TWVLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRH 90

Query: 64 TAYW 68
             W
Sbjct: 91 AELW 94

[Close]

BLAST of CmaCh18G009400 vs. TAIR10
Match: AT2G18196.1 (AT2G18196.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 2.0e-09
Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = 1


Query: 3   QTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKTGK 62
           QT  LKV M C GC   V+  + KL GVD+ +++++ ++VTV G VER  V + V + GK
Sbjct: 46  QTIDLKVRMCCSGCERVVKHAIYKLRGVDSVEVNLEMERVTVVGYVERKKVLKAVRRAGK 105

Query: 63  KTAYW 68
           +  +W
Sbjct: 106 RAEFW 110

[Close]

BLAST of CmaCh18G009400 vs. NCBI nr
Match: gi|659091856|ref|XP_008446769.1| (PREDICTED: copper transport protein CCH-like [Cucumis melo])

HSP 1 Score: 137.1 bits (344), Expect = 2.1e-29
Identity = 87/125 (69.60%), Postives = 91/125 (72.80%), Query Frame = 1


Query: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           MSQTTVLKVAMSCQGCVGAV+RVLGKLEGVD FDIDIDAQKVTVKGNVERDVVFQTVSKT
Sbjct: 1   MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVDTFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61  GKKTAYWEDEAPAAAAAAAAPAPAAAPAAAPAPVAAPAAAPAPEAAPAAAPPAEAEAKPA 120
           GKKTAYWED+A            +AAPAA PA                   PAEAEAKPA
Sbjct: 61  GKKTAYWEDDA------------SAAPAATPA-------------------PAEAEAKPA 94

Query: 121 ESVAA 126
           E +AA
Sbjct: 121 EPLAA 94

[Close]

BLAST of CmaCh18G009400 vs. NCBI nr
Match: gi|449465551|ref|XP_004150491.1| (PREDICTED: copper transport protein CCH [Cucumis sativus])

HSP 1 Score: 133.7 bits (335), Expect = 2.3e-28
Identity = 84/126 (66.67%), Postives = 92/126 (73.02%), Query Frame = 1


Query: 1   MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
           MSQTTVLKVAMSCQGCVGAV+RVLGKLEGV+ +DIDIDAQKVTVKGNVERDVVFQTVSKT
Sbjct: 1   MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETYDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61  GKKTAYWEDEAPAAAAAAAAPAPAAAPAAAPAPVAAPAAAPAPEAAPAAAPPAEAEAKPA 120
           GKKTAYWE++A            +AAPAA PA                   PAEAEAKPA
Sbjct: 61  GKKTAYWEEDA------------SAAPAATPA-------------------PAEAEAKPA 95

Query: 121 ESVAAV 127
           E +AA+
Sbjct: 121 EPLAAI 95

[Close]

BLAST of CmaCh18G009400 vs. NCBI nr
Match: gi|470145863|ref|XP_004308552.1| (PREDICTED: copper transport protein ATX1-like, partial [Fragaria vesca subsp. vesca])

HSP 1 Score: 117.1 bits (292), Expect = 2.2e-23
Identity = 66/85 (77.65%), Postives = 71/85 (83.53%), Query Frame = 1


Query: 2   SQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKTG 61
           SQTTVLKV MSCQGCVGAV+RVLGKLEGV+++DID DAQKVTVKGNV  + V QTVSKTG
Sbjct: 26  SQTTVLKVGMSCQGCVGAVKRVLGKLEGVESYDIDFDAQKVTVKGNVPAETVLQTVSKTG 85

Query: 62  KKTAYWEDEAPAAAAAAAAPAPAAA 87
           KKTAYWE EAPA   A  A A AAA
Sbjct: 86  KKTAYWEAEAPAEPEAKPAEAVAAA 110

[Close]

BLAST of CmaCh18G009400 vs. NCBI nr
Match: gi|596097548|ref|XP_007221369.1| (hypothetical protein PRUPE_ppa014090mg [Prunus persica])

HSP 1 Score: 113.2 bits (282), Expect = 3.2e-22
Identity = 64/85 (75.29%), Postives = 70/85 (82.35%), Query Frame = 1


Query: 2  SQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKTG 61
          SQTTVLKV MSCQGCVGAV+RVLGKLEGV+++DID DAQKVTVK N+  + V QTVSKTG
Sbjct: 3  SQTTVLKVGMSCQGCVGAVKRVLGKLEGVESYDIDFDAQKVTVKSNLPPETVLQTVSKTG 62

Query: 62 KKTAYWEDEAPAAAAAAAAPAPAAA 87
          KKTAYWE EAPA   A  A A AAA
Sbjct: 63 KKTAYWEAEAPAEPEAKPAEAVAAA 87

[Close]

BLAST of CmaCh18G009400 vs. NCBI nr
Match: gi|290886187|gb|ADD69807.1| (copper transport protein ATOX1 [Hevea brasiliensis])

HSP 1 Score: 112.5 bits (280), Expect = 5.5e-22
Identity = 54/73 (73.97%), Postives = 64/73 (87.67%), Query Frame = 1


Query: 1  MSQTTVLKVAMSCQGCVGAVRRVLGKLEGVDAFDIDIDAQKVTVKGNVERDVVFQTVSKT 60
          MSQT VLKV MSC+GCVGAV+RVLGK+EGV+++DID+  QKVTVKGNV+ + V QTVSKT
Sbjct: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPEAVLQTVSKT 60

Query: 61 GKKTAYWEDEAPA 74
          GKKT +WE EAPA
Sbjct: 61 GKKTTFWEAEAPA 73

The following BLAST results are available for this feature:

BLAST of CmaCh18G009400 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATOX1_ARATH	2.2e-23	71.05	Copper transport protein ATX1 OS=Arabidopsis thaliana GN=ATX1 PE=1 SV=2	[more]
CCH_ARATH	9.1e-17	57.72	Copper transport protein CCH OS=Arabidopsis thaliana GN=CCH PE=1 SV=1	[more]
HIP21_ARATH	1.1e-06	36.92	Heavy metal-associated isoprenylated plant protein 21 OS=Arabidopsis thaliana GN...	[more]
ATOX1_CANLF	1.9e-06	46.55	Copper transport protein ATOX1 OS=Canis lupus familiaris GN=ATOX1 PE=3 SV=1	[more]
ATOX1_SHEEP	7.3e-06	46.55	Copper transport protein ATOX1 OS=Ovis aries GN=ATOX1 PE=3 SV=1	[more]

BLAST of CmaCh18G009400 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTF7_CUCSA	1.6e-28	66.67	Copper chaperone OS=Cucumis sativus GN=Csa_5G615220 PE=4 SV=1	[more]
M5XM30_PRUPE	2.3e-22	75.29	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa014090mg PE=4 SV=1	[more]
D4P094_HEVBR	3.9e-22	73.97	Copper transport protein ATOX1 OS=Hevea brasiliensis GN=CCH PE=2 SV=1	[more]
Q5ZF67_PLAMJ	6.6e-22	60.16	Copper chaperone OS=Plantago major GN=cch1 PE=2 SV=1	[more]
M4CSN8_BRARP	6.6e-22	74.07	Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1	[more]

BLAST of CmaCh18G009400 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G66240.1	1.3e-24	71.05	homolog of anti-oxidant 1	[more]
AT3G56240.1	5.2e-18	57.72	copper chaperone	[more]
AT3G56891.1	9.4e-12	50.82	Heavy metal transport/detoxification superfamily protein	[more]
AT5G27690.1	2.0e-09	39.06	Heavy metal transport/detoxification superfamily protein	[more]
AT2G18196.1	2.0e-09	41.54	Heavy metal transport/detoxification superfamily protein	[more]

BLAST of CmaCh18G009400 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659091856\|ref\|XP_008446769.1\|	2.1e-29	69.60	PREDICTED: copper transport protein CCH-like [Cucumis melo]	[more]
gi\|449465551\|ref\|XP_004150491.1\|	2.3e-28	66.67	PREDICTED: copper transport protein CCH [Cucumis sativus]	[more]
gi\|470145863\|ref\|XP_004308552.1\|	2.2e-23	77.65	PREDICTED: copper transport protein ATX1-like, partial [Fragaria vesca subsp. ve...	[more]
gi\|596097548\|ref\|XP_007221369.1\|	3.2e-22	75.29	hypothetical protein PRUPE_ppa014090mg [Prunus persica]	[more]
gi\|290886187\|gb\|ADD69807.1\|	5.5e-22	73.97	copper transport protein ATOX1 [Hevea brasiliensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006121	HMA_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0030001	metal ion transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0046872	metal ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006816	calcium ion transport
biological_process	GO:0006612	protein targeting to membrane
biological_process	GO:0046916	cellular transition metal ion homeostasis
biological_process	GO:0030001	metal ion transport
biological_process	GO:0006878	cellular copper ion homeostasis
biological_process	GO:0010363	regulation of plant-type hypersensitive response
biological_process	GO:0009611	response to wounding
biological_process	GO:0009963	positive regulation of flavonoid biosynthetic process
biological_process	GO:0006598	polyamine catabolic process
biological_process	GO:0007030	Golgi organization
biological_process	GO:0009805	coumarin biosynthetic process
biological_process	GO:0006825	copper ion transport
biological_process	GO:0042398	cellular modified amino acid biosynthetic process
cellular_component	GO:0048046	apoplast
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016531	copper chaperone activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0046914	transition metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh18G009400.1	CmaCh18G009400.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006121	Heavy metal-associated domain, HMA	PFAM	PF00403	HMA	coord: 6..63 score: 4.0
IPR006121	Heavy metal-associated domain, HMA	PROFILE	PS50846	HMA_2	coord: 3..66 score: 12
IPR006121	Heavy metal-associated domain, HMA	unknown	SSF55008	HMA, heavy metal-associated domain	coord: 2..68 score: 2.36
None	No IPR available	GENE3D	G3DSA:3.30.70.100		coord: 2..68 score: 3.3
None	No IPR available	PANTHER	PTHR22814	COPPER TRANSPORT PROTEIN ATOX1-RELATED	coord: 1..84 score: 6.3E-49coord: 103..121 score: 6.3
None	No IPR available	PANTHER	PTHR22814:SF73	COPPER TRANSPORT PROTEIN CCH	coord: 1..84 score: 6.3E-49coord: 103..121 score: 6.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh18G009400	Cucsa.309040	Cucumber (Gy14) v1	cgycmaB0849
CmaCh18G009400	Cla020497	Watermelon (97103) v1	cmawmB372
CmaCh18G009400	Csa5G615220	Cucumber (Chinese Long) v2	cmacuB417
CmaCh18G009400	MELO3C012358	Melon (DHL92) v3.5.1	cmameB351
CmaCh18G009400	ClCG05G021700	Watermelon (Charleston Gray)	cmawcgB364
CmaCh18G009400	CSPI05G26420	Wild cucumber (PI 183967)	cmacpiB423
CmaCh18G009400	CmoCh04G015000	Cucurbita moschata (Rifu)	cmacmoB420
CmaCh18G009400	CmoCh18G009440	Cucurbita moschata (Rifu)	cmacmoB406
CmaCh18G009400	Lsi04G001420	Bottle gourd (USVL1VR-Ls)	cmalsiB379
CmaCh18G009400	Cp4.1LG01g14300	Cucurbita pepo (Zucchini)	cmacpeB429
CmaCh18G009400	MELO3C012358.2	Melon (DHL92) v3.6.1	cmamedB408
CmaCh18G009400	CsaV3_5G035570	Cucumber (Chinese Long) v3	cmacucB0498
CmaCh18G009400	Cla97C05G103400	Watermelon (97103) v2	cmawmbB423
CmaCh18G009400	Bhi07G000645	Wax gourd	cmawgoB0544
CmaCh18G009400	CsGy5G025890	Cucumber (Gy14) v2	cgybcmaB626
CmaCh18G009400	Carg18984	Silver-seed gourd	carcmaB1456
CmaCh18G009400	Carg01911	Silver-seed gourd	carcmaB1167

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh18G009400	CmaCh04G014250	Cucurbita maxima (Rimu)	cmacmaB402

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh18G009400	Cucurbita pepo (Zucchini)	cmacpeB415