CmoCh04G015000 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G015000
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionMetal ion binding protein
LocationCmo_Chr04 : 7672649 .. 7674936 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TATTTATTATAAATTTCGGTTGACCCGACCCATTAGACAGAGTCTATTAAAGCCCCGTGAAAGCCCGGCAAAATCCAGTAGCGCAGAGATCGGCGAGGGCGAATTTTCGATTGCATTTTCGTTCGTTTCTCTTCTGAATTTCTGTAATCTGTAACGATGTCTCAGGTACGCTACGAATCTATGGGTTATTTGTTCGTGTATCCGATTGTTGAAGATTCATTTCCATTTTTCATCCTTATCTTTTGTTTTTGTTTTCTCTCTCCGTTTCTCGTATGATTTGGAGATCGAAGATACGCAAGCTTTTTCTTTTTGAAATTCAAATCTGCAGCTCGGAGGACGAATCGTTTGTTTCGATTGAATTATAAGGATTTTTTTTGAAAAATTTTCAATCGATAACTTATCGGATGTTTTTATGCGCAAAAAGAAATCGTAAAAGCCACAGTGATGAAAGAACTGCTCGCGCGAGTGTTGATATCTTGCATAAATTGTACTTATTTCGCGATTCGGACTTGCACATGCTCAAGTCTTTGAGCATTTTGACTTTTTTCTTTTCATCTACTTCCCTGAGGATTTATGCATTTGGTTTTTCATTTAATGTGAATCTGACACGAGTGAGGGAAATCACTGTAACCGAGCCAATGAGATCTACTTCTGAGAGAGCTCCATAGAAGTATTTCGTTAGTATCGCATATTGATTTATTGGTTAGCAATTGGTCAATCAATCACAAAGGAAGCTTTACGTTGATCATATATTGATAATTTGTTTGGCCATTGATGAATGTTTTCCCGATTAACCAAATTAGAACGTTCTGCTCTATTTTGTGCGTTTTTTTTTTAATTATTAATCTCTGTTAATTTTGGAAGCTGGAGTTGTTGAAAAACAGGGAGAAAATTTATGGATATAACTCATGGATACAAGTCCCATTAGATAGACTTGGATGAGTAAATTTCTGTTTTGGAATTGGATAAAAGACCGTTGATATTAAGTACTCTTGTCCTGTTAAGTGCTAACTATTTCTTCGTATCAGGCAGTCCGTATTCCACTCTTCTCTTCTAGCTGAGTTCTTTGATCCCTCTTAATAAACACAGTTTGGAATTTGTTTTTGTGCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAGGGCTGTGTTGGAGCAGTCAAAAGGGTCTTGGGGAAACTGGAAGGTTTGTTATTCCTTTGCTAAATTATAGTTGTCTCATGTTGTGCTGTGCTCTTGTTTGATGTGTAATCTGTGTATGGGAGCATGAGGGTCGAGTTTTGGAGTTCGATATTGCATGTTTCAACATTTTGTACCCTGTAGAACGGTAATAAGTTTTGGATTAAGAGTAATACTTGGCTGCAAAATTGGCTGTAACCATTTTTCTTGTAATCCAGTCCAGCCATAGCGGAAAAAAGAAGCTTAAAAACCACAACTAGCAGCTAAGCATTACTCTTTCACTAATATGTAGACTTTTGAACGCGTAAACCACTTTTGCATATTGGGAAATGCTGGACATAATATGCTTGATAACCATGCGTCAACTTTTAAGGTGAATACTTGAATGATGCTTGGTGGGTATTAAATCTATCAATATTCGGAAATCGAGTATCCTTTAGTATAATCTCTTAAACCTTTGTTATTACCAACTCAATATGAACCCTCTGAACAAATAACTAGTTCCTACTCAAAGTGCTTGGCTACCATGTTCAGGTGTCGAGACATTTGACATCGATATAGATGCTCAAAAGGTGACTGTGAAAGGCAATGTGAGTCGCGATGTAGTTTTCCAAACCGTTTCGAAAACTGGGAAGAAGACTGCCTACTGGGAAGACGACGCCCCAGCAGCATCTGCCCAGACTGTGGCTGCTGCTTAAAATTTACTCCATGGAAATTTGCTGTTCATTGCGTAAGGTCTTTGCTTCCTGAAGCTAATAATGTTGTAATAGTACGTGAACTTGGCAATTTAGTCTTGTAATATTTTTATTGGAGCGTCTTTTGCATGACCTTCTACCTTAAAACTTATCTATATTCTACCCTTACGTTTTTGTTTTGCCCCAATTGTTTCATTTTGACCTTTGCTTTTGAGATGATTGACGAATTAATGAAGAATGCCTTCCATGGCTTCTTCTTGTTGAATTCTTTGGTTTGTTGATTGTTTATGCGCAAATCTAGCATGGAGGCTCGCCTGATTTGCTCGTGCTTCAATGATGTATTTATCTATTTGAGAACGAGGTGACTTTCAATTTGTGTTATATTTTTATATACCACGTTACACAAACTCTGG

mRNA sequence

TATTTATTATAAATTTCGGTTGACCCGACCCATTAGACAGAGTCTATTAAAGCCCCGTGAAAGCCCGGCAAAATCCAGTAGCGCAGAGATCGGCGAGGGCGAATTTTCGATTGCATTTTCGTTCGTTTCTCTTCTGAATTTCTGTAATCTGTAACGATGTCTCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAGGGCTGTGTTGGAGCAGTCAAAAGGGTCTTGGGGAAACTGGAAGGTGTCGAGACATTTGACATCGATATAGATGCTCAAAAGGTGACTGTGAAAGGCAATGTGAGTCGCGATGTAGTTTTCCAAACCGTTTCGAAAACTGGGAAGAAGACTGCCTACTGGGAAGACGACGCCCCAGCAGCATCTGCCCAGACTGTGGCTGCTGCTTAAAATTTACTCCATGGAAATTTGCTGTTCATTGCGTAAGGTCTTTGCTTCCTGAAGCTAATAATGTTGTAATAGTACGTGAACTTGGCAATTTAGTCTTGTAATATTTTTATTGGAGCGTCTTTTGCATGACCTTCTACCTTAAAACTTATCTATATTCTACCCTTACGTTTTTGTTTTGCCCCAATTGTTTCATTTTGACCTTTGCTTTTGAGATGATTGACGAATTAATGAAGAATGCCTTCCATGGCTTCTTCTTGTTGAATTCTTTGGTTTGTTGATTGTTTATGCGCAAATCTAGCATGGAGGCTCGCCTGATTTGCTCGTGCTTCAATGATGTATTTATCTATTTGAGAACGAGGTGACTTTCAATTTGTGTTATATTTTTATATACCACGTTACACAAACTCTGG

Coding sequence (CDS)

ATGTCTCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAGGGCTGTGTTGGAGCAGTCAAAAGGGTCTTGGGGAAACTGGAAGGTGTCGAGACATTTGACATCGATATAGATGCTCAAAAGGTGACTGTGAAAGGCAATGTGAGTCGCGATGTAGTTTTCCAAACCGTTTCGAAAACTGGGAAGAAGACTGCCTACTGGGAAGACGACGCCCCAGCAGCATCTGCCCAGACTGTGGCTGCTGCTTAA
Homology
[Close]
BLAST of CmoCh04G015000 vs. Swiss-Prot
Match: CCH_ARATH (Copper transport protein CCH OS=Arabidopsis thaliana GN=CCH PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 2.3e-24
Identity = 56/73 (76.71%), Postives = 62/73 (84.93%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNV  + VFQTVSKT
Sbjct: 1  MAQTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKT 60

Query: 61 GKKTAYWEDDAPA 74
          GKKT+YW  +A A
Sbjct: 61 GKKTSYWPVEAEA 73

[Close]
BLAST of CmoCh04G015000 vs. Swiss-Prot
Match: ATOX1_ARATH (Copper transport protein ATX1 OS=Arabidopsis thaliana GN=ATX1 PE=1 SV=2)

HSP 1 Score: 112.5 bits (280), Expect = 2.3e-24
Identity = 55/76 (72.37%), Postives = 64/76 (84.21%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          MSQT VL+VAM+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNV  D V QTV+KT
Sbjct: 1  MSQTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKT 60

Query: 61 GKKTAYWEDDAPAASA 77
          GKKTA+WE +   A A
Sbjct: 61 GKKTAFWEAEGETAKA 76

[Close]
BLAST of CmoCh04G015000 vs. Swiss-Prot
Match: ATOX1_CANLF (Copper transport protein ATOX1 OS=Canis lupus familiaris GN=ATOX1 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 1.5e-07
Identity = 29/58 (50.00%), Postives = 39/58 (67.24%), Query Frame = 1 

Query: 9  VAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAY 67
          V M+C+GC  AV RVL KL GVE FDID+  +KV +    S D++ +T+ KTGK  +Y
Sbjct: 8  VDMTCEGCSNAVSRVLNKLGGVE-FDIDLPNKKVCINSEHSVDILLETLEKTGKAVSY 64

[Close]
BLAST of CmoCh04G015000 vs. Swiss-Prot
Match: ATOX1_BOVIN (Copper transport protein ATOX1 OS=Bos taurus GN=ATOX1 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 9.5e-07
Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = 1 

Query: 9  VAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAY 67
          V M+C+GC  AV RVL KL GV+ FDID+  +KV +    S D + +T+ KTGK  +Y
Sbjct: 8  VDMTCEGCSNAVTRVLNKLGGVQ-FDIDLPNKKVCINSEHSVDTLLETLGKTGKAVSY 64

[Close]
BLAST of CmoCh04G015000 vs. Swiss-Prot
Match: ATOX1_SHEEP (Copper transport protein ATOX1 OS=Ovis aries GN=ATOX1 PE=3 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 9.5e-07
Identity = 28/58 (48.28%), Postives = 38/58 (65.52%), Query Frame = 1 

Query: 9  VAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAY 67
          V M+C+GC  AV RVL KL GV+ FDID+  +KV +    S D + +T+ KTGK  +Y
Sbjct: 8  VDMTCEGCSNAVTRVLNKLGGVQ-FDIDLPNKKVCINSEHSVDTLLETLGKTGKAVSY 64

[Close]
BLAST of CmoCh04G015000 vs. TrEMBL
Match: A0A0A0KTF7_CUCSA (Copper chaperone OS=Cucumis sativus GN=Csa_5G615220 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 5.1e-31
Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVET+DIDIDAQKVTVKGNV RDVVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETYDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDDAPAASAQTVAAA 83
          GKKTAYWE+DA AA A T A A
Sbjct: 61 GKKTAYWEEDASAAPAATPAPA 82

[Close]
BLAST of CmoCh04G015000 vs. TrEMBL
Match: A9PCL8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s24290g PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.7e-24
Identity = 63/85 (74.12%), Postives = 71/85 (83.53%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          MSQT VLKV MSC+GCVGAVKRVLGK+EGVE++DID+  QKVTVKGNV  D V QTVSKT
Sbjct: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKT 60

Query: 61 GKKTAYWEDDA---PAASAQTVAAA 83
          GKKTA+WE +A   PA  A+TVAAA
Sbjct: 61 GKKTAFWEAEAPAEPAKPAETVAAA 85

[Close]
BLAST of CmoCh04G015000 vs. TrEMBL
Match: A9PIL5_9ROSI (Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.7e-24
Identity = 63/85 (74.12%), Postives = 71/85 (83.53%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          MSQT VLKV MSC+GCVGAVKRVLGK+EGVE++DID+  QKVTVKGNV  D V QTVSKT
Sbjct: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKT 60

Query: 61 GKKTAYWEDDA---PAASAQTVAAA 83
          GKKTA+WE +A   PA  A+TVAAA
Sbjct: 61 GKKTAFWEAEAPAEPAKPAETVAAA 85

[Close]
BLAST of CmoCh04G015000 vs. TrEMBL
Match: Q6J338_9ROSI (Copper chaperone OS=Populus alba x Populus glandulosa GN=CCH PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.7e-24
Identity = 63/85 (74.12%), Postives = 71/85 (83.53%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          MSQT VLKV MSC+GCVGAVKRVLGK+EGVE++DID+  QKVTVKGNV  D V QTVSKT
Sbjct: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKT 60

Query: 61 GKKTAYWEDDA---PAASAQTVAAA 83
          GKKTA+WE +A   PA  A+TVAAA
Sbjct: 61 GKKTAFWEAEAPAEPAKPAETVAAA 85

[Close]
BLAST of CmoCh04G015000 vs. TrEMBL
Match: A0A0A1EP68_9ROSI (ATX2 OS=Populus simonii x Populus nigra GN=ATX2 PE=2 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 2.7e-24
Identity = 63/85 (74.12%), Postives = 71/85 (83.53%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          MSQT VLKV MSC+GCVGAVKRVLGK+EGVE++DID+  QKVTVKGNV  D V QTVSKT
Sbjct: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKT 60

Query: 61 GKKTAYWEDDA---PAASAQTVAAA 83
          GKKTA+WE +A   PA  A+TVAAA
Sbjct: 61 GKKTAFWEAEAPAEPAKPAETVAAA 85

[Close]
BLAST of CmoCh04G015000 vs. TAIR10
Match: AT3G56240.1 (AT3G56240.1 copper chaperone)

HSP 1 Score: 112.5 bits (280), Expect = 1.3e-25
Identity = 56/73 (76.71%), Postives = 62/73 (84.93%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNV  + VFQTVSKT
Sbjct: 1  MAQTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKT 60

Query: 61 GKKTAYWEDDAPA 74
          GKKT+YW  +A A
Sbjct: 61 GKKTSYWPVEAEA 73

[Close]
BLAST of CmoCh04G015000 vs. TAIR10
Match: AT1G66240.1 (AT1G66240.1 homolog of anti-oxidant 1)

HSP 1 Score: 112.5 bits (280), Expect = 1.3e-25
Identity = 55/76 (72.37%), Postives = 64/76 (84.21%), Query Frame = 1 

Query: 1   MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
           MSQT VL+VAM+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNV  D V QTV+KT
Sbjct: 31  MSQTVVLRVAMTCEGCVGAVKRVLGKMEGVESFDVDIKEQKVTVKGNVQPDAVLQTVTKT 90

Query: 61  GKKTAYWEDDAPAASA 77
           GKKTA+WE +   A A
Sbjct: 91  GKKTAFWEAEGETAKA 106

[Close]
BLAST of CmoCh04G015000 vs. TAIR10
Match: AT3G56891.1 (AT3G56891.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 1.8e-11
Identity = 30/61 (49.18%), Postives = 41/61 (67.21%), Query Frame = 1 

Query: 7  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAY 66
          L V M C+GC   V+R + KL+GV+T +ID+D QKVTV G V R+ V + V +TG+   Y
Sbjct: 20 LLVDMDCKGCEKKVRRAISKLDGVDTVEIDVDRQKVTVTGYVDREEVLKMVKRTGRTAEY 79

Query: 67 W 68
          W
Sbjct: 80 W 80

[Close]
BLAST of CmoCh04G015000 vs. TAIR10
Match: AT5G27690.1 (AT5G27690.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 4.4e-10
Identity = 26/64 (40.62%), Postives = 43/64 (67.19%), Query Frame = 1 

Query: 4  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKK 63
          T VL+V++ C+GC   +K++L K++GV T +ID+  QKVTV GNV  +++ + + K G+ 
Sbjct: 31 TWVLRVSIHCEGCKRKIKKILSKIDGVYTTNIDVKQQKVTVIGNVEPEILIKKIMKAGRH 90

Query: 64 TAYW 68
             W
Sbjct: 91 AELW 94

[Close]
BLAST of CmoCh04G015000 vs. TAIR10
Match: AT5G19090.1 (AT5G19090.1 Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 60.1 bits (144), Expect = 7.5e-10
Identity = 31/65 (47.69%), Postives = 40/65 (61.54%), Query Frame = 1 

Query: 3  QTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGK 62
          QT VLKV + C GC   VK++L K+EGV T  ID +  KVTV GNV   V+ + + K+GK
Sbjct: 10 QTCVLKVNIHCDGCKQKVKKILQKIEGVFTTKIDAELGKVTVSGNVDPSVLIKKLLKSGK 69

Query: 63 KTAYW 68
              W
Sbjct: 70 HAEIW 74

[Close]
BLAST of CmoCh04G015000 vs. NCBI nr
Match: gi|659091856|ref|XP_008446769.1| (PREDICTED: copper transport protein CCH-like [Cucumis melo])

HSP 1 Score: 142.9 bits (359), Expect = 2.5e-31
Identity = 75/82 (91.46%), Postives = 76/82 (92.68%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAVKRVLGKLEGV+TFDIDIDAQKVTVKGNV RDVVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVDTFDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDDAPAASAQTVAAA 83
          GKKTAYWEDDA AA A T A A
Sbjct: 61 GKKTAYWEDDASAAPAATPAPA 82

[Close]
BLAST of CmoCh04G015000 vs. NCBI nr
Match: gi|449465551|ref|XP_004150491.1| (PREDICTED: copper transport protein CCH [Cucumis sativus])

HSP 1 Score: 141.4 bits (355), Expect = 7.2e-31
Identity = 74/82 (90.24%), Postives = 76/82 (92.68%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVET+DIDIDAQKVTVKGNV RDVVFQTVSKT
Sbjct: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETYDIDIDAQKVTVKGNVERDVVFQTVSKT 60

Query: 61 GKKTAYWEDDAPAASAQTVAAA 83
          GKKTAYWE+DA AA A T A A
Sbjct: 61 GKKTAYWEEDASAAPAATPAPA 82

[Close]
BLAST of CmoCh04G015000 vs. NCBI nr
Match: gi|470145863|ref|XP_004308552.1| (PREDICTED: copper transport protein ATX1-like, partial [Fragaria vesca subsp. vesca])

HSP 1 Score: 122.5 bits (306), Expect = 3.5e-25
Identity = 66/85 (77.65%), Postives = 71/85 (83.53%), Query Frame = 1 

Query: 2   SQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTG 61
           SQTTVLKV MSCQGCVGAVKRVLGKLEGVE++DID DAQKVTVKGNV  + V QTVSKTG
Sbjct: 26  SQTTVLKVGMSCQGCVGAVKRVLGKLEGVESYDIDFDAQKVTVKGNVPAETVLQTVSKTG 85

Query: 62  KKTAYWEDDAP----AASAQTVAAA 83
           KKTAYWE +AP    A  A+ VAAA
Sbjct: 86  KKTAYWEAEAPAEPEAKPAEAVAAA 110

[Close]
BLAST of CmoCh04G015000 vs. NCBI nr
Match: gi|970059722|ref|XP_015056610.1| (PREDICTED: copper transport protein ATX1-like [Solanum pennellii])

HSP 1 Score: 119.8 bits (299), Expect = 2.3e-24
Identity = 59/73 (80.82%), Postives = 64/73 (87.67%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          MSQT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNV  + VFQTVSKT
Sbjct: 1  MSQTVVLKVGMSCQGCVGAVNRVLGKMEGVESFDIDIKEQKVTVKGNVEPEAVFQTVSKT 60

Query: 61 GKKTAYWEDDAPA 74
          GKKT+YWE+ APA
Sbjct: 61 GKKTSYWEEPAPA 73

[Close]
BLAST of CmoCh04G015000 vs. NCBI nr
Match: gi|566192520|ref|XP_002315448.2| (hypothetical protein POPTR_0010s24290g [Populus trichocarpa])

HSP 1 Score: 119.0 bits (297), Expect = 3.9e-24
Identity = 63/85 (74.12%), Postives = 71/85 (83.53%), Query Frame = 1 

Query: 1  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKT 60
          MSQT VLKV MSC+GCVGAVKRVLGK+EGVE++DID+  QKVTVKGNV  D V QTVSKT
Sbjct: 1  MSQTVVLKVGMSCEGCVGAVKRVLGKMEGVESYDIDLKEQKVTVKGNVQPDAVLQTVSKT 60

Query: 61 GKKTAYWEDDA---PAASAQTVAAA 83
          GKKTA+WE +A   PA  A+TVAAA
Sbjct: 61 GKKTAFWEAEAPAEPAKPAETVAAA 85

The following BLAST results are available for this feature:
BLAST of CmoCh04G015000 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CCH_ARATH2.3e-2476.71Copper transport protein CCH OS=Arabidopsis thaliana GN=CCH PE=1 SV=1[more]
ATOX1_ARATH2.3e-2472.37Copper transport protein ATX1 OS=Arabidopsis thaliana GN=ATX1 PE=1 SV=2[more]
ATOX1_CANLF1.5e-0750.00Copper transport protein ATOX1 OS=Canis lupus familiaris GN=ATOX1 PE=3 SV=1[more]
ATOX1_BOVIN9.5e-0748.28Copper transport protein ATOX1 OS=Bos taurus GN=ATOX1 PE=3 SV=1[more]
ATOX1_SHEEP9.5e-0748.28Copper transport protein ATOX1 OS=Ovis aries GN=ATOX1 PE=3 SV=1[more]
BLAST of CmoCh04G015000 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KTF7_CUCSA5.1e-3190.24Copper chaperone OS=Cucumis sativus GN=Csa_5G615220 PE=4 SV=1[more]
A9PCL8_POPTR2.7e-2474.12Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s24290g PE=2 SV=1[more]
A9PIL5_9ROSI2.7e-2474.12Putative uncharacterized protein OS=Populus trichocarpa x Populus deltoides PE=2... [more]
Q6J338_9ROSI2.7e-2474.12Copper chaperone OS=Populus alba x Populus glandulosa GN=CCH PE=2 SV=1[more]
A0A0A1EP68_9ROSI2.7e-2474.12ATX2 OS=Populus simonii x Populus nigra GN=ATX2 PE=2 SV=1[more]
BLAST of CmoCh04G015000 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G56240.11.3e-2576.71 copper chaperone[more]
AT1G66240.11.3e-2572.37 homolog of anti-oxidant 1[more]
AT3G56891.11.8e-1149.18 Heavy metal transport/detoxification superfamily protein [more]
AT5G27690.14.4e-1040.63 Heavy metal transport/detoxification superfamily protein [more]
AT5G19090.17.5e-1047.69 Heavy metal transport/detoxification superfamily protein [more]
BLAST of CmoCh04G015000 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659091856|ref|XP_008446769.1|2.5e-3191.46PREDICTED: copper transport protein CCH-like [Cucumis melo][more]
gi|449465551|ref|XP_004150491.1|7.2e-3190.24PREDICTED: copper transport protein CCH [Cucumis sativus][more]
gi|470145863|ref|XP_004308552.1|3.5e-2577.65PREDICTED: copper transport protein ATX1-like, partial [Fragaria vesca subsp. ve... [more]
gi|970059722|ref|XP_015056610.1|2.3e-2480.82PREDICTED: copper transport protein ATX1-like [Solanum pennellii][more]
gi|566192520|ref|XP_002315448.2|3.9e-2474.12hypothetical protein POPTR_0010s24290g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR006121HMA_dom
Vocabulary: Biological Process
TermDefinition
GO:0030001metal ion transport
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006816 calcium ion transport
biological_process GO:0006612 protein targeting to membrane
biological_process GO:0046916 cellular transition metal ion homeostasis
biological_process GO:0030001 metal ion transport
biological_process GO:0006878 cellular copper ion homeostasis
biological_process GO:0010363 regulation of plant-type hypersensitive response
biological_process GO:0009611 response to wounding
biological_process GO:0009963 positive regulation of flavonoid biosynthetic process
biological_process GO:0006598 polyamine catabolic process
biological_process GO:0007030 Golgi organization
biological_process GO:0009805 coumarin biosynthetic process
biological_process GO:0006825 copper ion transport
biological_process GO:0042398 cellular modified amino acid biosynthetic process
cellular_component GO:0048046 apoplast
cellular_component GO:0009507 chloroplast
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005575 cellular_component
molecular_function GO:0016531 copper chaperone activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0046914 transition metal ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G015000.1CmoCh04G015000.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006121Heavy metal-associated domain, HMAPFAMPF00403HMAcoord: 6..63
score: 1.4
IPR006121Heavy metal-associated domain, HMAPROFILEPS50846HMA_2coord: 3..66
score: 13
IPR006121Heavy metal-associated domain, HMAunknownSSF55008HMA, heavy metal-associated domaincoord: 2..68
score: 7.33
NoneNo IPR availableGENE3DG3DSA:3.30.70.100coord: 2..68
score: 8.5
NoneNo IPR availablePANTHERPTHR22814COPPER TRANSPORT PROTEIN ATOX1-RELATEDcoord: 1..76
score: 3.3
NoneNo IPR availablePANTHERPTHR22814:SF73COPPER TRANSPORT PROTEIN CCHcoord: 1..76
score: 3.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G015000Cucsa.309040Cucumber (Gy14) v1cgycmoB0848
CmoCh04G015000CmaCh18G009400Cucurbita maxima (Rimu)cmacmoB420
CmoCh04G015000CmaCh04G014250Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G015000Cla020497Watermelon (97103) v1cmowmB693
CmoCh04G015000Csa5G615220Cucumber (Chinese Long) v2cmocuB738
CmoCh04G015000MELO3C012358Melon (DHL92) v3.5.1cmomeB631
CmoCh04G015000ClCG05G021700Watermelon (Charleston Gray)cmowcgB654
CmoCh04G015000CSPI05G26420Wild cucumber (PI 183967)cmocpiB745
CmoCh04G015000Lsi04G001420Bottle gourd (USVL1VR-Ls)cmolsiB660
CmoCh04G015000Cp4.1LG01g14300Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G015000MELO3C012358.2Melon (DHL92) v3.6.1cmomedB720
CmoCh04G015000CsaV3_5G035570Cucumber (Chinese Long) v3cmocucB0874
CmoCh04G015000Cla97C05G103400Watermelon (97103) v2cmowmbB729
CmoCh04G015000Bhi07G000645Wax gourdcmowgoB0904
CmoCh04G015000CsGy5G025890Cucumber (Gy14) v2cgybcmoB650
CmoCh04G015000Carg18984Silver-seed gourdcarcmoB1412
CmoCh04G015000Carg01911Silver-seed gourdcarcmoB1138
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh04G015000CmoCh18G009440Cucurbita moschata (Rifu)cmocmoB336
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G015000Cucurbita moschata (Rifu)cmocmoB468
CmoCh04G015000Cucurbita maxima (Rimu)cmacmoB739
CmoCh04G015000Watermelon (Charleston Gray)cmowcgB681
CmoCh04G015000Watermelon (97103) v1cmowmB662
CmoCh04G015000Cucurbita pepo (Zucchini)cmocpeB651
CmoCh04G015000Cucurbita pepo (Zucchini)cmocpeB687
CmoCh04G015000Bottle gourd (USVL1VR-Ls)cmolsiB700