Cp4.1LG01g13950 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG01g13950
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionSec-independent translocase protein TatC
LocationCp4.1LG01 : 7931034 .. 7934797 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAGCCTTGGAAGCACGTAAGTACACACCCCCAAAATATTATCATCCTCAAGTAAGGTCCAAAAATTGATGACTTAGATTTTTCGGAGGAGTTCTGATTTTTTCGGCATAACGCTGAAAGCCCCCATCGATTTTGATTCAGAAAGCTACAGAAGATATGGGAAGCATTAGCGGTGCTCTGACATCGCATTTGCAGCTTAGTCACTGCCGTTTCTCTGCTAGAACCTCTCACTCTCAGCTTGCTTCAGCTCGAATTGGCCCAACGTCGAGAAGGTCGAAGTTGCGGTTCTCCAGTTTGCTCAGCCGTAGAAATTTCAACAGATTTGTGTGTTCTGCTGTCGATGACGACGTAAGAGAGAAGCAGATGACGGATTTGGGTGGTGGTAATCGTTCCACCGTAGTCGAGGATGTGCCAGGTACTAATATTACCAAAACCATGGTTGATATCAAGGTCTTTTCGCCTGAAAATCGTGCTTGGTTATAGTTTGCGATTCCGAACCATTTTGGAAGCTTTTTGTGACATGGTTAAACTGCTTATTTCTTTGGTTTTCCCTTATTAGCAATTGGATTATGTAGAGTTCGTCCTTAATTTTGTTTAGATTGTGCACGTGATAGGATTAATCCTAGAAATTACCTGTGTCTAATAGAGAAGCATGTCCTGGTTAGATATTTAGCTGAGCTTACGTGAGTCCAGGATTTGAAGGTAGAAGTTCATAAATGGATTTCTGTGAATCCTTTATCCAGGAAGGATAAAACTTATTGGGACTGTTCATGCTTTCAGATTTAAATGTTCATTGCACATATTTGTTCCTACCTATTGAATTATGTGGCTTCAGAAAGTTGATGCTATAATTGATATACAAGTTGCTAATACCCCATTTTTTCATGGAAAAATAAATAGATATCGGCGAAAGCTCAACAAATGGGGCTCCAGAAAAAAGTGATGTATATAACTTTCTGTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTATCAGTTTTGGCGGTGGGAGCTGCAATTCTTGGATGCTTTGCATTTTCGAAAGAACTCGTCTTAATTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTGAAGGTCAGAACTTTGAATGATGAAATATAATTGCATTATTAGTATAATCACTTTTATGGACTTGTGAGTTGTGAGCTTGGTTGCCATCCATTTGAATAGCTATTGATACTAAAATGGTTCGTGATACAAAAAAAATCTCTTTCCTTTTTTATCAACCACTATTAAATACAACAAGAATCTAATTAGATATTAAGAACATAGAAAAGTACAATGTATATCGTTTTTTGAAATACTCAGCTTCTTAGTTATATGATGATTGTGCACTGGGAAGCTTTCTGAATATGCGAACATAATGAAGCTATGGCGTTGCTTACCCTTTTTATTTGTTAGTATCCCGATGTTGAGTTAAAACAGTTTCCTTACTGTATCTATCTTTTTGGTGTGTATTTATATTAAGAGTCTTGTGGAGGAGAATTTCACACTGATCTTACTAAAGAAGTGAAAAAGTGTTCCCCGATGGGTCGCGTCGCGTTCTCAAAGTGAAAGTTTTTTGCCTTTCTTAAGATAGGGCATGGTTCAATTGTAGTTTTTCGGTTGAGTTCGTTCTTTTATTTCAAATGCAGCCCATTCCTGGTTAACTCTCTGCTCGGGATGAATGGGCTGGGTGCCCGTTCTTCATTCCCAATATTAAATATTGTTTCTGATTTGTGTTTAATTCCAAAATTCATTCTCCACTTCCCATATGCTGTTGTATATTAGCTCATGTTGTTGGTGGGGATCAATAACAATAAAATTCTCCTTGTGCGCTCCAGGTATCAGGATACTGTGGCCTTCTCCTTGGAAGTCCTGTCATCCTCTACGAGATTATTGCGTTTGTTCTTCCAGGATTGACAAGGGCAGAAAGACGGTTTCTCGGGCCTATTGTCCTAGGCTCTTCTGTGCTTTTTTACGCAGGAATTGCCTTCTCCTACATAGTTTTGACACCAGCAGCTCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATAGATCAATACTTCGAATTCGTTCTCGTGCTCATGTTCAGTACAGGCTTGTCTTTCCAGGTAAAGTTTTTTGCTTAGGAATGTTGTTCATACACTAGAATGCTGGTCACCAGCCAATCCCTAGAAATTCCGATTCTTTCTTTCTCCTTTAGGAACAATCGTAAACCATTCAAACCATTCATGGTAATTTCGCCTATGGAGCTAGCTTTTTGACAGCGTTCATTTCATCTTGTTTGTAGGTTCCAGTAATACAGATTCTACTCGGACAACTTGGACTGGTCTCAGGAGACCAAATGTTATCGATTTGGAGATACGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTCCTCACACCATCAACAGACCCCCTAACTCAGGTGCTTCTAGCAGCTCCCCTGCTGGGTCTTTACTTGGGGGGTGCCTGGGTGGTCAAGCTCTCAGGGCGATAGATTCAACCCTGGTTTTTCAGCTCTGTGAGAATTCTGTACATTCATGGAATTCTATGGTGTAGTGTAATTGTAACACCAATTAAGAGAAGGGAATATACGTTCCACGAATCTTTCTAAACTACTCTGCTTGTCACTGTAAAAATAGGTAATTTTTTAGGTTATGAATTACACAATAATAGAAATCTGTTTCTTTCACGACAAGAACTAGACAGTATGGTAACAAAACTGGATCCGAGGCTGTAGATATATCAGATTAGATGAATAATCTTGTTTAGTCGTTTAACGTTACATTCTGCATTCTACTTTCTAGATCAGAATCTGCGAAGCCACCTAGTTCGATCTCGAGCTGCTTCAATGAATTTCGGAGATTGTTGCATGCCTGAAGAAAGCCTTCCGAATTACCATTAAGACTTCCCAACTCTGCCTGCATATTGTCAAGAAAGCTAGAAATTTTCTCAGAAGCTTCTTTAATGGCAGGGACCTCTTGTGGGGGGTAAAGACAAGCTCCAAGCTCGTCCACCTGCACTCCAATTCCTTGGCATAGCCTCAATAGATTCTCCAAGGTTGCTAACTTACTTTCGTTGGTTTCATTTTCCAGCTTAAGCAAACTAGTGATAGAGCGAATGAGTTCCTTAATAACTTTTAGTATTGAAGATATGATGCTAATAGCAGATTGAGCAACTCTCATCTCTTCGGCTGATAAATCGTCACCTATATCGGCATCATCGCTTGTATTACCCTCGTCCTGCGAGTGCAAACTGCTGTCAACTTTGTTAGATGATTCTTCGGGAGCGTCGTCCAAGTCGGAGGGACCTTGTTTAAGCTCCTTCATTTCTCGGAGGACGTCCTTCACTGATACACCAACCTGTATTAGTGCTCGGCCAATTGCAGTTACATTTGTGGAAGGAGCTTTCTTAAGAGCAGAGCAAGCTTCCCAAACTGCACCAACCAACTGCGGAACTACTTGGTTTTGATCCTTACTATCCCGAGGTCCTGAAAAGTTCATTCACCAAGGTTAACACTAGTTCTATCAAAAGAGTAGAACAAAATTGCAAACATGATTTCACAACAACGAATAAATGAATTTAACCCTATCATCAGTACTCCATGATACTGTAATAGATAGTCTAGTTTAACATGAACTCAAGG

mRNA sequence

TAGCCTTGGAAGCACGTAAGTACACACCCCCAAAATATTATCATCCTCAAGTAAGGTCCAAAAATTGATGACTTAGATTTTTCGGAGGAGTTCTGATTTTTTCGGCATAACGCTGAAAGCCCCCATCGATTTTGATTCAGAAAGCTACAGAAGATATGGGAAGCATTAGCGGTGCTCTGACATCGCATTTGCAGCTTAGTCACTGCCGTTTCTCTGCTAGAACCTCTCACTCTCAGCTTGCTTCAGCTCGAATTGGCCCAACGTCGAGAAGGTCGAAGTTGCGGTTCTCCAGTTTGCTCAGCCGTAGAAATTTCAACAGATTTGTGTGTTCTGCTGTCGATGACGACGTAAGAGAGAAGCAGATGACGGATTTGGGTGGTGGTAATCGTTCCACCGTAGTCGAGGATGTGCCAGATATCGGCGAAAGCTCAACAAATGGGGCTCCAGAAAAAAGTGATGTATATAACTTTCTGTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTATCAGTTTTGGCGGTGGGAGCTGCAATTCTTGGATGCTTTGCATTTTCGAAAGAACTCGTCTTAATTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTGAAGGTATCAGGATACTGTGGCCTTCTCCTTGGAAGTCCTGTCATCCTCTACGAGATTATTGCGTTTGTTCTTCCAGGATTGACAAGGGCAGAAAGACGGTTTCTCGGGCCTATTGTCCTAGGCTCTTCTGTGCTTTTTTACGCAGGAATTGCCTTCTCCTACATAGTTTTGACACCAGCAGCTCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATAGATCAATACTTCGAATTCGTTCTCGTGCTCATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTAATACAGATTCTACTCGGACAACTTGGACTGGTCTCAGGAGACCAAATGTTATCGATTTGGAGATACGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTCCTCACACCATCAACAGACCCCCTAACTCAGGTGCTTCTAGCAGCTCCCCTGCTGGGTCTTTACTTGGGGGGTGCCTGGGTGGTCAAGCTCTCAGGGCGATAGATTCAACCCTGGTTTTTCAGCTCTGTGAGAATTCTGTACATTCATGGAATTCTATGGTGTAGTGTAATTGTAACACCAATTAAGAGAAGGGAATATACGTTCCACGAATCTTTCTAAACTACTCTGCTTGTCACTGTAAAAATAGGTAATTTTTTAGGTTATGAATTACACAATAATAGAAATCTGTTTCTTTCACGACAAGAACTAGACAGTATGGTAACAAAACTGGATCCGAGGCTGTAGATATATCAGATTAGATGAATAATCTTGTTTAGTCGTTTAACGTTACATTCTGCATTCTACTTTCTAGATCAGAATCTGCGAAGCCACCTAGTTCGATCTCGAGCTGCTTCAATGAATTTCGGAGATTGTTGCATGCCTGAAGAAAGCCTTCCGAATTACCATTAAGACTTCCCAACTCTGCCTGCATATTGTCAAGAAAGCTAGAAATTTTCTCAGAAGCTTCTTTAATGGCAGGGACCTCTTGTGGGGGGTAAAGACAAGCTCCAAGCTCGTCCACCTGCACTCCAATTCCTTGGCATAGCCTCAATAGATTCTCCAAGGTTGCTAACTTACTTTCGTTGGTTTCATTTTCCAGCTTAAGCAAACTAGTGATAGAGCGAATGAGTTCCTTAATAACTTTTAGTATTGAAGATATGATGCTAATAGCAGATTGAGCAACTCTCATCTCTTCGGCTGATAAATCGTCACCTATATCGGCATCATCGCTTGTATTACCCTCGTCCTGCGAGTGCAAACTGCTGTCAACTTTGTTAGATGATTCTTCGGGAGCGTCGTCCAAGTCGGAGGGACCTTGTTTAAGCTCCTTCATTTCTCGGAGGACGTCCTTCACTGATACACCAACCTGTATTAGTGCTCGGCCAATTGCAGTTACATTTGTGGAAGGAGCTTTCTTAAGAGCAGAGCAAGCTTCCCAAACTGCACCAACCAACTGCGGAACTACTTGGTTTTGATCCTTACTATCCCGAGGTCCTGAAAAGTTCATTCACCAAGGTTAACACTAGTTCTATCAAAAGAGTAGAACAAAATTGCAAACATGATTTCACAACAACGAATAAATGAATTTAACCCTATCATCAGTACTCCATGATACTGTAATAGATAGTCTAGTTTAACATGAACTCAAGG

Coding sequence (CDS)

ATGGGAAGCATTAGCGGTGCTCTGACATCGCATTTGCAGCTTAGTCACTGCCGTTTCTCTGCTAGAACCTCTCACTCTCAGCTTGCTTCAGCTCGAATTGGCCCAACGTCGAGAAGGTCGAAGTTGCGGTTCTCCAGTTTGCTCAGCCGTAGAAATTTCAACAGATTTGTGTGTTCTGCTGTCGATGACGACGTAAGAGAGAAGCAGATGACGGATTTGGGTGGTGGTAATCGTTCCACCGTAGTCGAGGATGTGCCAGATATCGGCGAAAGCTCAACAAATGGGGCTCCAGAAAAAAGTGATGTATATAACTTTCTGTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTATCAGTTTTGGCGGTGGGAGCTGCAATTCTTGGATGCTTTGCATTTTCGAAAGAACTCGTCTTAATTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTGAAGGTATCAGGATACTGTGGCCTTCTCCTTGGAAGTCCTGTCATCCTCTACGAGATTATTGCGTTTGTTCTTCCAGGATTGACAAGGGCAGAAAGACGGTTTCTCGGGCCTATTGTCCTAGGCTCTTCTGTGCTTTTTTACGCAGGAATTGCCTTCTCCTACATAGTTTTGACACCAGCAGCTCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATAGATCAATACTTCGAATTCGTTCTCGTGCTCATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTAATACAGATTCTACTCGGACAACTTGGACTGGTCTCAGGAGACCAAATGTTATCGATTTGGAGATACGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTCCTCACACCATCAACAGACCCCCTAACTCAGGTGCTTCTAGCAGCTCCCCTGCTGGGTCTTTACTTGGGGGGTGCCTGGGTGGTCAAGCTCTCAGGGCGATAG

Protein sequence

MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSAVDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
BLAST of Cp4.1LG01g13950 vs. Swiss-Prot
Match: TATC_PEA (Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum GN=TATC PE=1 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.6e-127
Identity = 238/315 (75.56%), Postives = 272/315 (86.35%), Query Frame = 1

Query: 46  SLLSRRNFNRFVCSAVDDDVREKQMTDLGGGNR--STVVEDVPD-------IGESSTNGA 105
           SL   ++F+R VC AVDD++REKQ   L   +    + VE+ P+       I E +    
Sbjct: 39  SLRKNKSFDRLVCFAVDDEIREKQQQQLSTSSTRLGSAVEERPENKDMIDGISEEALENF 98

Query: 106 PE---KSDVYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKEL 165
            E   +S +Y+FLYPSK+LLPDDKEMS+FDHLEELR+RIF+SVL VG +ILGCFAFSK+L
Sbjct: 99  KEDGERSAIYDFLYPSKELLPDDKEMSIFDHLEELRERIFISVLGVGGSILGCFAFSKDL 158

Query: 166 VLILEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAER 225
           V ILEAPVK +GVRFLQL PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAF++PGLT+ ER
Sbjct: 159 VKILEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFIIPGLTKEER 218

Query: 226 RFLGPIVLGSSVLFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFS 285
           +FLGPIVLGSSVLFYAGI FSY+VL PAALNFFV+YAEGAVESLWSIDQYFEFVLVLMFS
Sbjct: 219 KFLGPIVLGSSVLFYAGITFSYLVLVPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFS 278

Query: 286 TGLSFQVPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLL 345
           TGLSFQVP+IQ+LLGQLGLVSGD+MLS+WRYVVVGAVVAAAV+TPSTDPLTQVLLAAPLL
Sbjct: 279 TGLSFQVPIIQLLLGQLGLVSGDKMLSVWRYVVVGAVVAAAVVTPSTDPLTQVLLAAPLL 338

Query: 346 GLYLGGAWVVKLSGR 349
           GLYLGGAW+VKL+GR
Sbjct: 339 GLYLGGAWMVKLAGR 353

BLAST of Cp4.1LG01g13950 vs. Swiss-Prot
Match: TATC_ARATH (Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis thaliana GN=TATC PE=1 SV=2)

HSP 1 Score: 438.0 bits (1125), Expect = 1.0e-121
Identity = 244/346 (70.52%), Postives = 276/346 (79.77%), Query Frame = 1

Query: 3   SISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSAVD 62
           S S AL  H +L+     + T      +     + R + LR+S +  RR+      SA++
Sbjct: 5   STSSALIHHFRLTTRNLGSPTKQRCPYAVTFCNSWREAGLRYS-VTQRRSKGFGPVSALN 64

Query: 63  DDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSVF 122
           DD    + T    G  S V +  PD  E  +      S VY FLYP K+ LPDDKEM++F
Sbjct: 65  DDDSPTETTP---GVGSAVEDRPPDSSEDRS------SSVYEFLYPRKEELPDDKEMTIF 124

Query: 123 DHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTLK 182
           DHLEELR+RIFVSVLAVGAAILGCFAFSK+L++ LEAPVK QGVRFLQL PGEFFFTTLK
Sbjct: 125 DHLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLK 184

Query: 183 VSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPAA 242
           VSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIV GSS+LFYAG+AFSY VLTPAA
Sbjct: 185 VSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAA 244

Query: 243 LNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIW 302
           LNFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQ+G+VSGDQMLSIW
Sbjct: 245 LNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIW 304

Query: 303 RYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 349
           RYVVVGAVVAAAV+TPSTDP+TQ+LLA PLLGLYLGGAW+VKL+GR
Sbjct: 305 RYVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340

BLAST of Cp4.1LG01g13950 vs. Swiss-Prot
Match: TATC_MAIZE (Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays GN=TATC PE=2 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 1.1e-120
Identity = 236/312 (75.64%), Postives = 261/312 (83.65%), Query Frame = 1

Query: 50  RRNFNRFVCSAVDDD--------VREKQMTDLGGGNRSTVVEDVPDIG--ESSTNGAP-- 109
           RR      C+AVD D        + +K+    G G     +ED P     E+ + G P  
Sbjct: 48  RRRRQCLRCAAVDGDGALRESGPLPQKESPSSGIG---AALEDPPPGPPVENGSFGGPSQ 107

Query: 110 -EKSDVYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLI 169
            E+S +Y FLYPSKDLLPDDKEMS+FDHLEELR RIF+SVLAVGAAILGCFAFSK+LV+ 
Sbjct: 108 EEQSALYTFLYPSKDLLPDDKEMSIFDHLEELRDRIFISVLAVGAAILGCFAFSKDLVIF 167

Query: 170 LEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFL 229
           LEAPV  QGVRFLQL PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAFV+PGLTR ER+FL
Sbjct: 168 LEAPVTAQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVIPGLTRDERKFL 227

Query: 230 GPIVLGSSVLFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGL 289
           GPIVLGSSVLFY GI FSY VL+PAALNFFV+YA+GAVESLWSIDQYFEF+LVLMFSTGL
Sbjct: 228 GPIVLGSSVLFYLGIFFSYTVLSPAALNFFVNYADGAVESLWSIDQYFEFILVLMFSTGL 287

Query: 290 SFQVPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLY 349
           SFQVPVIQ+LLGQLGLVS DQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLA PLLGLY
Sbjct: 288 SFQVPVIQLLLGQLGLVSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGLY 347

BLAST of Cp4.1LG01g13950 vs. Swiss-Prot
Match: TATC_ORYSJ (Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa subsp. japonica GN=TATC PE=2 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 7.9e-119
Identity = 251/370 (67.84%), Postives = 277/370 (74.86%), Query Frame = 1

Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLL--------SRRN 60
           MGS +GAL SH       F  R  H            R S LR   LL        S R+
Sbjct: 1   MGS-AGALLSHSPPGLGGFPPRHHHHH----------RLSVLRCVPLLPSPAPEPLSCRH 60

Query: 61  FNRFVCSAVDDDVREK---------QMTDLGGGNRSTVVEDV-PDIGESSTNGA----PE 120
                C+AVD     +         Q  +   G+    +ED  P   ++ + G      E
Sbjct: 61  GRHLRCAAVDGGAGRETERPSPPAPQREESPSGSLGAALEDPSPQPVQNGSFGGITEDEE 120

Query: 121 KSDVYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILE 180
           +S +YNFLYPSK+LLPDDKEMS+FDHLEELR RIFVSVLAVGAAILGCFA+SK+L+ ILE
Sbjct: 121 QSSLYNFLYPSKELLPDDKEMSIFDHLEELRDRIFVSVLAVGAAILGCFAYSKDLIRILE 180

Query: 181 APVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGP 240
           APV  QGVRFLQL PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FLGP
Sbjct: 181 APVSVQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRDERKFLGP 240

Query: 241 IVLGSSVLFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSF 300
           IVLGSSVLFY GI FSY VL PAALNFFV+YA+GAVESLWSIDQYFEFVLVL+FSTGLSF
Sbjct: 241 IVLGSSVLFYLGIFFSYTVLAPAALNFFVNYADGAVESLWSIDQYFEFVLVLLFSTGLSF 300

Query: 301 QVPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLG 349
           QVPVIQ+LLGQ+GLVS DQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLA PLLGLYLG
Sbjct: 301 QVPVIQLLLGQVGLVSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGLYLG 359

BLAST of Cp4.1LG01g13950 vs. Swiss-Prot
Match: TATC_SYNY3 (Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=tatC PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 6.8e-78
Identity = 151/238 (63.45%), Postives = 187/238 (78.57%), Query Frame = 1

Query: 111 DLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQ 170
           D +PDD EMS+FDHL+ELR RIF+S+ AV   ++ CF F K LV  L+ P     V+FLQ
Sbjct: 19  DEVPDDVEMSLFDHLDELRTRIFLSLGAVLVGVVACFIFVKPLVQWLQVPAGT--VKFLQ 78

Query: 171 LGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAG 230
           L PGEFFF ++KV+GY G+L+ SP ILY+II FVLPGLTR ERR LGP+VLGSSVLF+AG
Sbjct: 79  LSPGEFFFVSVKVAGYSGILVMSPFILYQIIQFVLPGLTRRERRLLGPVVLGSSVLFFAG 138

Query: 231 IAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQL 290
           + F+Y  L PAAL FFVSY    VE LWSID+YFEFVL+LMFSTGL+FQ+P+IQ++LG L
Sbjct: 139 LGFAYYALIPAALKFFVSYGADVVEQLWSIDKYFEFVLLLMFSTGLAFQIPIIQVVLGFL 198

Query: 291 GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 349
           G+VS +QML  WR+V++GA+V  A+LTPSTDPLTQ LLA  +LGLY GG   V+L G+
Sbjct: 199 GIVSSEQMLKGWRFVILGAMVLGAILTPSTDPLTQSLLAGAVLGLYFGGIGCVRLLGK 254

BLAST of Cp4.1LG01g13950 vs. TrEMBL
Match: A0A0A0KTA2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611060 PE=3 SV=1)

HSP 1 Score: 610.9 bits (1574), Expect = 9.5e-172
Identity = 319/348 (91.67%), Postives = 335/348 (96.26%), Query Frame = 1

Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGAL+SHLQLS CRFSARTS SQL S RI PT RR+KLRF+ LL RRNFNRFVCSA
Sbjct: 1   MGSISGALSSHLQLSDCRFSARTSQSQLTSVRISPTLRRTKLRFTGLLRRRNFNRFVCSA 60

Query: 61  VDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120
           VDDDVREKQ T+LGGGN STVVEDVPDI ++STNGAP+KSD+YNFLYPSKDLLPDD+EMS
Sbjct: 61  VDDDVREKQ-TELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDREMS 120

Query: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180
           VFDHLEELRQRIFVSVLAVGAAI+GCFAFSK+L+L+LEAPVKEQGVRFLQLGPGEFFFTT
Sbjct: 121 VFDHLEELRQRIFVSVLAVGAAIVGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTT 180

Query: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 240
           LKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFYAGIAFSY+VLTP
Sbjct: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYVVLTP 240

Query: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300
           AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS
Sbjct: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300

Query: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 349
           IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

BLAST of Cp4.1LG01g13950 vs. TrEMBL
Match: A0A0B0PM57_GOSAR (Sec-independent translocase protein TatC OS=Gossypium arboreum GN=F383_13666 PE=3 SV=1)

HSP 1 Score: 489.6 bits (1259), Expect = 3.2e-135
Identity = 272/358 (75.98%), Postives = 295/358 (82.40%), Query Frame = 1

Query: 1   MGSI--SGALTSHLQLSHCRFS-ARTSHSQLASARIG-PTSRRSKLRFSSLLSRRNFNRF 60
           MGS   S AL SHLQL+ C F    ++ +QL    +    SRR KL F++    + F   
Sbjct: 1   MGSANTSAALISHLQLNRCCFKLVESTRTQLEFNSLKFRLSRRGKLEFAASRRGKGFRTA 60

Query: 61  VC-SAVDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAP-----EKSDVYNFLYPSK 120
           VC +AVDDDV+E +         ++  ED PD+   S   AP     E S +YNFLYP K
Sbjct: 61  VCFAAVDDDVKENRQQVFSETRSASATEDRPDVANISPEEAPFEQNNEGSSLYNFLYPDK 120

Query: 121 DLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQ 180
           DLLPDDKEM++FDHLEELRQRIFVSVLAVGAAILGCFAFSKEL++ LEAPVK QGVRFLQ
Sbjct: 121 DLLPDDKEMTIFDHLEELRQRIFVSVLAVGAAILGCFAFSKELIVFLEAPVKAQGVRFLQ 180

Query: 181 LGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAG 240
           L PGEFFFTTLKVSGYCGLLLGSPVILYEII+FVLPGLTRAERRFLGPIVLGSSVLFYAG
Sbjct: 181 LAPGEFFFTTLKVSGYCGLLLGSPVILYEIISFVLPGLTRAERRFLGPIVLGSSVLFYAG 240

Query: 241 IAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQL 300
           IAFSY+VLTPAALNFFVSYAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ LLGQL
Sbjct: 241 IAFSYLVLTPAALNFFVSYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQL 300

Query: 301 GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 349
           GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKL+GR
Sbjct: 301 GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAAPLLGLYLGGAWVVKLTGR 358

BLAST of Cp4.1LG01g13950 vs. TrEMBL
Match: A0A0D2T199_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G158400 PE=3 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 9.3e-135
Identity = 269/354 (75.99%), Postives = 293/354 (82.77%), Query Frame = 1

Query: 3   SISGALTSHLQLSHCRFS-ARTSHSQLASARIG-PTSRRSKLRFSSLLSRRNFNRFVC-S 62
           S S AL SHLQL+ C F    ++ +QL    +    SRR KL F++    + F   VC +
Sbjct: 5   STSAALISHLQLNRCCFKLVESTRTQLEFNSLKFRHSRRGKLEFAASRRGKGFRTAVCFA 64

Query: 63  AVDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAP-----EKSDVYNFLYPSKDLLP 122
           AVDDDV+E +         ++  ED PD+   S   AP     E S +YNFLYP KDLLP
Sbjct: 65  AVDDDVKENRQQVFSETRSASATEDRPDVVNISPEEAPFEQNNEGSSLYNFLYPDKDLLP 124

Query: 123 DDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPG 182
           DDKEM++FDHLEELRQRIFVSVLAVGAAILGCFAFSKEL++ LEAPVK QGVRFLQL PG
Sbjct: 125 DDKEMTIFDHLEELRQRIFVSVLAVGAAILGCFAFSKELIVFLEAPVKVQGVRFLQLAPG 184

Query: 183 EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFS 242
           EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFS
Sbjct: 185 EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFS 244

Query: 243 YIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVS 302
           Y+VLTPAALNFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ LLGQLGLVS
Sbjct: 245 YLVLTPAALNFFVTYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQLGLVS 304

Query: 303 GDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 349
           GDQMLSIWRYVVVGAV+AAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKL+GR
Sbjct: 305 GDQMLSIWRYVVVGAVIAAAVLTPSTDPLTQMLLAAPLLGLYLGGAWVVKLTGR 358

BLAST of Cp4.1LG01g13950 vs. TrEMBL
Match: A0A067KRT6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09288 PE=3 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 2.1e-134
Identity = 271/361 (75.07%), Postives = 298/361 (82.55%), Query Frame = 1

Query: 1   MGSISGALTSHLQLSHCRF----SARTSHSQLASARIGPTS-----RRSKLRFSSLLSRR 60
           MG+ + AL  HLQL  C +    S +    Q AS +    S     RR +LRF    + R
Sbjct: 1   MGTTATALIPHLQLHGCFYRCFDSIKNHQQQPASLQFNNNSSSSSLRRGRLRFDGSPNTR 60

Query: 61  NFNRFVC-SAVDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGA---PEKSDVYNFLY 120
           +F++ VC +AVDDD+ EKQ   L     S+ +ED  D+ +SS        E S +YNFLY
Sbjct: 61  SFSKVVCFAAVDDDIGEKQ---LDSPTTSSALEDRADMLDSSQENFGQDTEGSAIYNFLY 120

Query: 121 PSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVR 180
           PSK+LLPDDKEMS+FDHLEELRQRIFVSVLAVG AILGCFAFSKEL+++LEAPVK QGVR
Sbjct: 121 PSKELLPDDKEMSIFDHLEELRQRIFVSVLAVGGAILGCFAFSKELIMLLEAPVKVQGVR 180

Query: 181 FLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLF 240
           FLQL PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAFVLPGLTRAERRFLGPIVLGSSVLF
Sbjct: 181 FLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVLPGLTRAERRFLGPIVLGSSVLF 240

Query: 241 YAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILL 300
           YAGIAFSY+VLTPAALNFFVSYAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ LL
Sbjct: 241 YAGIAFSYLVLTPAALNFFVSYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLL 300

Query: 301 GQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSG 349
           GQ+GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKL+G
Sbjct: 301 GQVGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAAPLLGLYLGGAWVVKLTG 358

BLAST of Cp4.1LG01g13950 vs. TrEMBL
Match: A0A061E5P5_THECC (Sec-independent periplasmic protein translocase OS=Theobroma cacao GN=TCM_009037 PE=3 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 2.7e-134
Identity = 264/358 (73.74%), Postives = 297/358 (82.96%), Query Frame = 1

Query: 3   SISGALTSHLQLSHCRF----SARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVC 62
           S S AL SHLQL+   F    S RT   +L S ++G  SRR +L F +  S++ F R VC
Sbjct: 5   STSAALISHLQLNKSSFKLVKSTRTE-LKLNSIKLGD-SRRGRLEFGASRSKKGFGRAVC 64

Query: 63  -SAVDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEK-------SDVYNFLYPSK 122
            +AVDDDV+E +  DL   + ++ +ED PD+    +   P++       S +YNFLYP K
Sbjct: 65  FAAVDDDVKENRQQDLTKTSSASAIEDRPDVANILSEETPQRFEQNKEGSGLYNFLYPDK 124

Query: 123 DLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQ 182
           +LLPDDKEM++FDHLEELRQRIFVSVLA+G A+LGCFAFSKEL++ LEAPVK QGVRFLQ
Sbjct: 125 ELLPDDKEMTIFDHLEELRQRIFVSVLAIGGAMLGCFAFSKELIMFLEAPVKTQGVRFLQ 184

Query: 183 LGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAG 242
           L PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAG
Sbjct: 185 LAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAG 244

Query: 243 IAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQL 302
           IAFSY VL PAALNFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ LLGQL
Sbjct: 245 IAFSYSVLAPAALNFFVTYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQL 304

Query: 303 GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 349
           GLVSGDQMLSIWRYVVVGAV+AAAVLTPSTDPLTQ+LLA PLLGLYLGGAW+VKL+GR
Sbjct: 305 GLVSGDQMLSIWRYVVVGAVIAAAVLTPSTDPLTQMLLATPLLGLYLGGAWIVKLTGR 360

BLAST of Cp4.1LG01g13950 vs. TAIR10
Match: AT2G01110.1 (AT2G01110.1 Sec-independent periplasmic protein translocase)

HSP 1 Score: 438.0 bits (1125), Expect = 5.6e-123
Identity = 244/346 (70.52%), Postives = 276/346 (79.77%), Query Frame = 1

Query: 3   SISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSAVD 62
           S S AL  H +L+     + T      +     + R + LR+S +  RR+      SA++
Sbjct: 5   STSSALIHHFRLTTRNLGSPTKQRCPYAVTFCNSWREAGLRYS-VTQRRSKGFGPVSALN 64

Query: 63  DDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSVF 122
           DD    + T    G  S V +  PD  E  +      S VY FLYP K+ LPDDKEM++F
Sbjct: 65  DDDSPTETTP---GVGSAVEDRPPDSSEDRS------SSVYEFLYPRKEELPDDKEMTIF 124

Query: 123 DHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTLK 182
           DHLEELR+RIFVSVLAVGAAILGCFAFSK+L++ LEAPVK QGVRFLQL PGEFFFTTLK
Sbjct: 125 DHLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLK 184

Query: 183 VSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPAA 242
           VSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIV GSS+LFYAG+AFSY VLTPAA
Sbjct: 185 VSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAA 244

Query: 243 LNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIW 302
           LNFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQ+G+VSGDQMLSIW
Sbjct: 245 LNFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIW 304

Query: 303 RYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 349
           RYVVVGAVVAAAV+TPSTDP+TQ+LLA PLLGLYLGGAW+VKL+GR
Sbjct: 305 RYVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340

BLAST of Cp4.1LG01g13950 vs. NCBI nr
Match: gi|659091655|ref|XP_008446660.1| (PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucumis melo])

HSP 1 Score: 612.8 bits (1579), Expect = 3.6e-172
Identity = 319/348 (91.67%), Postives = 335/348 (96.26%), Query Frame = 1

Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISG+L+SHLQLSHCRFSARTS SQL S RI PT RR+KLR +  LSRRNFNRFVCSA
Sbjct: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120
           VDDDVREKQ T+LGGGN STVVEDVPDI ++STNGAP+KSD+YNFLYPSKDLLPDDKEMS
Sbjct: 61  VDDDVREKQ-TELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMS 120

Query: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180
           VFDHLEELRQRIFVSVLAVGAAI+GCFAFSK+L+L+LEAPVKEQGVRFLQLGPGEFFFTT
Sbjct: 121 VFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTT 180

Query: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 240
           LKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFYAGIAFSYIVLTP
Sbjct: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTP 240

Query: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300
           AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLS
Sbjct: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLS 300

Query: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 349
           IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

BLAST of Cp4.1LG01g13950 vs. NCBI nr
Match: gi|449434578|ref|XP_004135073.1| (PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucumis sativus])

HSP 1 Score: 610.9 bits (1574), Expect = 1.4e-171
Identity = 319/348 (91.67%), Postives = 335/348 (96.26%), Query Frame = 1

Query: 1   MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGAL+SHLQLS CRFSARTS SQL S RI PT RR+KLRF+ LL RRNFNRFVCSA
Sbjct: 1   MGSISGALSSHLQLSDCRFSARTSQSQLTSVRISPTLRRTKLRFTGLLRRRNFNRFVCSA 60

Query: 61  VDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120
           VDDDVREKQ T+LGGGN STVVEDVPDI ++STNGAP+KSD+YNFLYPSKDLLPDD+EMS
Sbjct: 61  VDDDVREKQ-TELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDREMS 120

Query: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180
           VFDHLEELRQRIFVSVLAVGAAI+GCFAFSK+L+L+LEAPVKEQGVRFLQLGPGEFFFTT
Sbjct: 121 VFDHLEELRQRIFVSVLAVGAAIVGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTT 180

Query: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTP 240
           LKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFYAGIAFSY+VLTP
Sbjct: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYVVLTP 240

Query: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300
           AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS
Sbjct: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300

Query: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 349
           IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

BLAST of Cp4.1LG01g13950 vs. NCBI nr
Match: gi|728848095|gb|KHG27538.1| (Sec-independent translocase protein TatC [Gossypium arboreum])

HSP 1 Score: 489.6 bits (1259), Expect = 4.6e-135
Identity = 272/358 (75.98%), Postives = 295/358 (82.40%), Query Frame = 1

Query: 1   MGSI--SGALTSHLQLSHCRFS-ARTSHSQLASARIG-PTSRRSKLRFSSLLSRRNFNRF 60
           MGS   S AL SHLQL+ C F    ++ +QL    +    SRR KL F++    + F   
Sbjct: 1   MGSANTSAALISHLQLNRCCFKLVESTRTQLEFNSLKFRLSRRGKLEFAASRRGKGFRTA 60

Query: 61  VC-SAVDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAP-----EKSDVYNFLYPSK 120
           VC +AVDDDV+E +         ++  ED PD+   S   AP     E S +YNFLYP K
Sbjct: 61  VCFAAVDDDVKENRQQVFSETRSASATEDRPDVANISPEEAPFEQNNEGSSLYNFLYPDK 120

Query: 121 DLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQ 180
           DLLPDDKEM++FDHLEELRQRIFVSVLAVGAAILGCFAFSKEL++ LEAPVK QGVRFLQ
Sbjct: 121 DLLPDDKEMTIFDHLEELRQRIFVSVLAVGAAILGCFAFSKELIVFLEAPVKAQGVRFLQ 180

Query: 181 LGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAG 240
           L PGEFFFTTLKVSGYCGLLLGSPVILYEII+FVLPGLTRAERRFLGPIVLGSSVLFYAG
Sbjct: 181 LAPGEFFFTTLKVSGYCGLLLGSPVILYEIISFVLPGLTRAERRFLGPIVLGSSVLFYAG 240

Query: 241 IAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQL 300
           IAFSY+VLTPAALNFFVSYAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ LLGQL
Sbjct: 241 IAFSYLVLTPAALNFFVSYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQL 300

Query: 301 GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 349
           GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKL+GR
Sbjct: 301 GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAAPLLGLYLGGAWVVKLTGR 358

BLAST of Cp4.1LG01g13950 vs. NCBI nr
Match: gi|823210415|ref|XP_012438244.1| (PREDICTED: sec-independent protein translocase protein TATC, chloroplastic isoform X2 [Gossypium raimondii])

HSP 1 Score: 488.0 bits (1255), Expect = 1.3e-134
Identity = 269/354 (75.99%), Postives = 293/354 (82.77%), Query Frame = 1

Query: 3   SISGALTSHLQLSHCRFS-ARTSHSQLASARIG-PTSRRSKLRFSSLLSRRNFNRFVC-S 62
           S S AL SHLQL+ C F    ++ +QL    +    SRR KL F++    + F   VC +
Sbjct: 5   STSAALISHLQLNRCCFKLVESTRTQLEFNSLKFRHSRRGKLEFAASRRGKGFRTAVCFA 64

Query: 63  AVDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAP-----EKSDVYNFLYPSKDLLP 122
           AVDDDV+E +         ++  ED PD+   S   AP     E S +YNFLYP KDLLP
Sbjct: 65  AVDDDVKENRQQVFSETRSASATEDRPDVVNISPEEAPFEQNNEGSSLYNFLYPDKDLLP 124

Query: 123 DDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPG 182
           DDKEM++FDHLEELRQRIFVSVLAVGAAILGCFAFSKEL++ LEAPVK QGVRFLQL PG
Sbjct: 125 DDKEMTIFDHLEELRQRIFVSVLAVGAAILGCFAFSKELIVFLEAPVKVQGVRFLQLAPG 184

Query: 183 EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFS 242
           EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFS
Sbjct: 185 EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFS 244

Query: 243 YIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVS 302
           Y+VLTPAALNFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ LLGQLGLVS
Sbjct: 245 YLVLTPAALNFFVTYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQLGLVS 304

Query: 303 GDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 349
           GDQMLSIWRYVVVGAV+AAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKL+GR
Sbjct: 305 GDQMLSIWRYVVVGAVIAAAVLTPSTDPLTQMLLAAPLLGLYLGGAWVVKLTGR 358

BLAST of Cp4.1LG01g13950 vs. NCBI nr
Match: gi|802620750|ref|XP_012075694.1| (PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Jatropha curcas])

HSP 1 Score: 486.9 bits (1252), Expect = 3.0e-134
Identity = 271/361 (75.07%), Postives = 298/361 (82.55%), Query Frame = 1

Query: 1   MGSISGALTSHLQLSHCRF----SARTSHSQLASARIGPTS-----RRSKLRFSSLLSRR 60
           MG+ + AL  HLQL  C +    S +    Q AS +    S     RR +LRF    + R
Sbjct: 1   MGTTATALIPHLQLHGCFYRCFDSIKNHQQQPASLQFNNNSSSSSLRRGRLRFDGSPNTR 60

Query: 61  NFNRFVC-SAVDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGA---PEKSDVYNFLY 120
           +F++ VC +AVDDD+ EKQ   L     S+ +ED  D+ +SS        E S +YNFLY
Sbjct: 61  SFSKVVCFAAVDDDIGEKQ---LDSPTTSSALEDRADMLDSSQENFGQDTEGSAIYNFLY 120

Query: 121 PSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVR 180
           PSK+LLPDDKEMS+FDHLEELRQRIFVSVLAVG AILGCFAFSKEL+++LEAPVK QGVR
Sbjct: 121 PSKELLPDDKEMSIFDHLEELRQRIFVSVLAVGGAILGCFAFSKELIMLLEAPVKVQGVR 180

Query: 181 FLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLF 240
           FLQL PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAFVLPGLTRAERRFLGPIVLGSSVLF
Sbjct: 181 FLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVLPGLTRAERRFLGPIVLGSSVLF 240

Query: 241 YAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILL 300
           YAGIAFSY+VLTPAALNFFVSYAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ LL
Sbjct: 241 YAGIAFSYLVLTPAALNFFVSYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLL 300

Query: 301 GQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSG 349
           GQ+GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKL+G
Sbjct: 301 GQVGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAAPLLGLYLGGAWVVKLTG 358

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TATC_PEA1.6e-12775.56Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum... [more]
TATC_ARATH1.0e-12170.52Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis t... [more]
TATC_MAIZE1.1e-12075.64Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays GN=T... [more]
TATC_ORYSJ7.9e-11967.84Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa ... [more]
TATC_SYNY36.8e-7863.45Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PC... [more]
Match NameE-valueIdentityDescription
A0A0A0KTA2_CUCSA9.5e-17291.67Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611060 PE=3 SV=1[more]
A0A0B0PM57_GOSAR3.2e-13575.98Sec-independent translocase protein TatC OS=Gossypium arboreum GN=F383_13666 PE=... [more]
A0A0D2T199_GOSRA9.3e-13575.99Uncharacterized protein OS=Gossypium raimondii GN=B456_008G158400 PE=3 SV=1[more]
A0A067KRT6_JATCU2.1e-13475.07Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09288 PE=3 SV=1[more]
A0A061E5P5_THECC2.7e-13473.74Sec-independent periplasmic protein translocase OS=Theobroma cacao GN=TCM_009037... [more]
Match NameE-valueIdentityDescription
AT2G01110.15.6e-12370.52 Sec-independent periplasmic protein translocase[more]
Match NameE-valueIdentityDescription
gi|659091655|ref|XP_008446660.1|3.6e-17291.67PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucu... [more]
gi|449434578|ref|XP_004135073.1|1.4e-17191.67PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucu... [more]
gi|728848095|gb|KHG27538.1|4.6e-13575.98Sec-independent translocase protein TatC [Gossypium arboreum][more]
gi|823210415|ref|XP_012438244.1|1.3e-13475.99PREDICTED: sec-independent protein translocase protein TATC, chloroplastic isofo... [more]
gi|802620750|ref|XP_012075694.1|3.0e-13475.07PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Jatr... [more]
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR019820Sec-indep_translocase_CS
IPR002033TatC
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009902 chloroplast relocation
biological_process GO:0006364 rRNA processing
biological_process GO:0008150 biological_process
biological_process GO:0009567 double fertilization forming a zygote and endosperm
biological_process GO:0010027 thylakoid membrane organization
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0042793 transcription from plastid promoter
biological_process GO:0035304 regulation of protein dephosphorylation
biological_process GO:0071806 protein transmembrane transport
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0010207 photosystem II assembly
biological_process GO:0000023 maltose metabolic process
cellular_component GO:0009507 chloroplast
cellular_component GO:0031361 integral component of thylakoid membrane
cellular_component GO:0043235 receptor complex
cellular_component GO:0033281 TAT protein transport complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0009977 proton motive force dependent protein transmembrane transporter activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g13950.1Cp4.1LG01g13950.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002033Sec-independent periplasmic protein translocase TatCPRINTSPR01840TATCFAMILYcoord: 194..212
score: 3.3E-43coord: 120..147
score: 3.3E-43coord: 212..238
score: 3.3E-43coord: 263..291
score: 3.3
IPR002033Sec-independent periplasmic protein translocase TatCHAMAPMF_00902TatCcoord: 114..348
score: 17
IPR002033Sec-independent periplasmic protein translocase TatCPFAMPF00902TatCcoord: 123..331
score: 3.4
IPR002033Sec-independent periplasmic protein translocase TatCTIGRFAMsTIGR00945TIGR00945coord: 122..336
score: 1.3
IPR019820Sec-independent periplasmic protein translocase, conserved sitePROSITEPS01218TATCcoord: 263..282
scor
NoneNo IPR availablePANTHERPTHR30371SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATCcoord: 94..348
score: 2.3E
NoneNo IPR availablePANTHERPTHR30371:SF3SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC, CHLOROPLASTICcoord: 94..348
score: 2.3E

The following gene(s) are paralogous to this gene:

None