Cp4.1LG01g13950 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAGCCTTGGAAGCACGTAAGTACACACCCCCAAAATATTATCATCCTCAAGTAAGGTCCAAAAATTGATGACTTAGATTTTTCGGAGGAGTTCTGATTTTTTCGGCATAACGCTGAAAGCCCCCATCGATTTTGATTCAGAAAGCTACAGAAGATATGGGAAGCATTAGCGGTGCTCTGACATCGCATTTGCAGCTTAGTCACTGCCGTTTCTCTGCTAGAACCTCTCACTCTCAGCTTGCTTCAGCTCGAATTGGCCCAACGTCGAGAAGGTCGAAGTTGCGGTTCTCCAGTTTGCTCAGCCGTAGAAATTTCAACAGATTTGTGTGTTCTGCTGTCGATGACGACGTAAGAGAGAAGCAGATGACGGATTTGGGTGGTGGTAATCGTTCCACCGTAGTCGAGGATGTGCCAGGTACTAATATTACCAAAACCATGGTTGATATCAAGGTCTTTTCGCCTGAAAATCGTGCTTGGTTATAGTTTGCGATTCCGAACCATTTTGGAAGCTTTTTGTGACATGGTTAAACTGCTTATTTCTTTGGTTTTCCCTTATTAGCAATTGGATTATGTAGAGTTCGTCCTTAATTTTGTTTAGATTGTGCACGTGATAGGATTAATCCTAGAAATTACCTGTGTCTAATAGAGAAGCATGTCCTGGTTAGATATTTAGCTGAGCTTACGTGAGTCCAGGATTTGAAGGTAGAAGTTCATAAATGGATTTCTGTGAATCCTTTATCCAGGAAGGATAAAACTTATTGGGACTGTTCATGCTTTCAGATTTAAATGTTCATTGCACATATTTGTTCCTACCTATTGAATTATGTGGCTTCAGAAAGTTGATGCTATAATTGATATACAAGTTGCTAATACCCCATTTTTTCATGGAAAAATAAATAGATATCGGCGAAAGCTCAACAAATGGGGCTCCAGAAAAAAGTGATGTATATAACTTTCTGTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTATCAGTTTTGGCGGTGGGAGCTGCAATTCTTGGATGCTTTGCATTTTCGAAAGAACTCGTCTTAATTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTGAAGGTCAGAACTTTGAATGATGAAATATAATTGCATTATTAGTATAATCACTTTTATGGACTTGTGAGTTGTGAGCTTGGTTGCCATCCATTTGAATAGCTATTGATACTAAAATGGTTCGTGATACAAAAAAAATCTCTTTCCTTTTTTATCAACCACTATTAAATACAACAAGAATCTAATTAGATATTAAGAACATAGAAAAGTACAATGTATATCGTTTTTTGAAATACTCAGCTTCTTAGTTATATGATGATTGTGCACTGGGAAGCTTTCTGAATATGCGAACATAATGAAGCTATGGCGTTGCTTACCCTTTTTATTTGTTAGTATCCCGATGTTGAGTTAAAACAGTTTCCTTACTGTATCTATCTTTTTGGTGTGTATTTATATTAAGAGTCTTGTGGAGGAGAATTTCACACTGATCTTACTAAAGAAGTGAAAAAGTGTTCCCCGATGGGTCGCGTCGCGTTCTCAAAGTGAAAGTTTTTTGCCTTTCTTAAGATAGGGCATGGTTCAATTGTAGTTTTTCGGTTGAGTTCGTTCTTTTATTTCAAATGCAGCCCATTCCTGGTTAACTCTCTGCTCGGGATGAATGGGCTGGGTGCCCGTTCTTCATTCCCAATATTAAATATTGTTTCTGATTTGTGTTTAATTCCAAAATTCATTCTCCACTTCCCATATGCTGTTGTATATTAGCTCATGTTGTTGGTGGGGATCAATAACAATAAAATTCTCCTTGTGCGCTCCAGGTATCAGGATACTGTGGCCTTCTCCTTGGAAGTCCTGTCATCCTCTACGAGATTATTGCGTTTGTTCTTCCAGGATTGACAAGGGCAGAAAGACGGTTTCTCGGGCCTATTGTCCTAGGCTCTTCTGTGCTTTTTTACGCAGGAATTGCCTTCTCCTACATAGTTTTGACACCAGCAGCTCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATAGATCAATACTTCGAATTCGTTCTCGTGCTCATGTTCAGTACAGGCTTGTCTTTCCAGGTAAAGTTTTTTGCTTAGGAATGTTGTTCATACACTAGAATGCTGGTCACCAGCCAATCCCTAGAAATTCCGATTCTTTCTTTCTCCTTTAGGAACAATCGTAAACCATTCAAACCATTCATGGTAATTTCGCCTATGGAGCTAGCTTTTTGACAGCGTTCATTTCATCTTGTTTGTAGGTTCCAGTAATACAGATTCTACTCGGACAACTTGGACTGGTCTCAGGAGACCAAATGTTATCGATTTGGAGATACGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTCCTCACACCATCAACAGACCCCCTAACTCAGGTGCTTCTAGCAGCTCCCCTGCTGGGTCTTTACTTGGGGGGTGCCTGGGTGGTCAAGCTCTCAGGGCGATAGATTCAACCCTGGTTTTTCAGCTCTGTGAGAATTCTGTACATTCATGGAATTCTATGGTGTAGTGTAATTGTAACACCAATTAAGAGAAGGGAATATACGTTCCACGAATCTTTCTAAACTACTCTGCTTGTCACTGTAAAAATAGGTAATTTTTTAGGTTATGAATTACACAATAATAGAAATCTGTTTCTTTCACGACAAGAACTAGACAGTATGGTAACAAAACTGGATCCGAGGCTGTAGATATATCAGATTAGATGAATAATCTTGTTTAGTCGTTTAACGTTACATTCTGCATTCTACTTTCTAGATCAGAATCTGCGAAGCCACCTAGTTCGATCTCGAGCTGCTTCAATGAATTTCGGAGATTGTTGCATGCCTGAAGAAAGCCTTCCGAATTACCATTAAGACTTCCCAACTCTGCCTGCATATTGTCAAGAAAGCTAGAAATTTTCTCAGAAGCTTCTTTAATGGCAGGGACCTCTTGTGGGGGGTAAAGACAAGCTCCAAGCTCGTCCACCTGCACTCCAATTCCTTGGCATAGCCTCAATAGATTCTCCAAGGTTGCTAACTTACTTTCGTTGGTTTCATTTTCCAGCTTAAGCAAACTAGTGATAGAGCGAATGAGTTCCTTAATAACTTTTAGTATTGAAGATATGATGCTAATAGCAGATTGAGCAACTCTCATCTCTTCGGCTGATAAATCGTCACCTATATCGGCATCATCGCTTGTATTACCCTCGTCCTGCGAGTGCAAACTGCTGTCAACTTTGTTAGATGATTCTTCGGGAGCGTCGTCCAAGTCGGAGGGACCTTGTTTAAGCTCCTTCATTTCTCGGAGGACGTCCTTCACTGATACACCAACCTGTATTAGTGCTCGGCCAATTGCAGTTACATTTGTGGAAGGAGCTTTCTTAAGAGCAGAGCAAGCTTCCCAAACTGCACCAACCAACTGCGGAACTACTTGGTTTTGATCCTTACTATCCCGAGGTCCTGAAAAGTTCATTCACCAAGGTTAACACTAGTTCTATCAAAAGAGTAGAACAAAATTGCAAACATGATTTCACAACAACGAATAAATGAATTTAACCCTATCATCAGTACTCCATGATACTGTAATAGATAGTCTAGTTTAACATGAACTCAAGG TAGCCTTGGAAGCACGTAAGTACACACCCCCAAAATATTATCATCCTCAAGTAAGGTCCAAAAATTGATGACTTAGATTTTTCGGAGGAGTTCTGATTTTTTCGGCATAACGCTGAAAGCCCCCATCGATTTTGATTCAGAAAGCTACAGAAGATATGGGAAGCATTAGCGGTGCTCTGACATCGCATTTGCAGCTTAGTCACTGCCGTTTCTCTGCTAGAACCTCTCACTCTCAGCTTGCTTCAGCTCGAATTGGCCCAACGTCGAGAAGGTCGAAGTTGCGGTTCTCCAGTTTGCTCAGCCGTAGAAATTTCAACAGATTTGTGTGTTCTGCTGTCGATGACGACGTAAGAGAGAAGCAGATGACGGATTTGGGTGGTGGTAATCGTTCCACCGTAGTCGAGGATGTGCCAGATATCGGCGAAAGCTCAACAAATGGGGCTCCAGAAAAAAGTGATGTATATAACTTTCTGTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTATCAGTTTTGGCGGTGGGAGCTGCAATTCTTGGATGCTTTGCATTTTCGAAAGAACTCGTCTTAATTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTGAAGGTATCAGGATACTGTGGCCTTCTCCTTGGAAGTCCTGTCATCCTCTACGAGATTATTGCGTTTGTTCTTCCAGGATTGACAAGGGCAGAAAGACGGTTTCTCGGGCCTATTGTCCTAGGCTCTTCTGTGCTTTTTTACGCAGGAATTGCCTTCTCCTACATAGTTTTGACACCAGCAGCTCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATAGATCAATACTTCGAATTCGTTCTCGTGCTCATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTAATACAGATTCTACTCGGACAACTTGGACTGGTCTCAGGAGACCAAATGTTATCGATTTGGAGATACGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTCCTCACACCATCAACAGACCCCCTAACTCAGGTGCTTCTAGCAGCTCCCCTGCTGGGTCTTTACTTGGGGGGTGCCTGGGTGGTCAAGCTCTCAGGGCGATAGATTCAACCCTGGTTTTTCAGCTCTGTGAGAATTCTGTACATTCATGGAATTCTATGGTGTAGTGTAATTGTAACACCAATTAAGAGAAGGGAATATACGTTCCACGAATCTTTCTAAACTACTCTGCTTGTCACTGTAAAAATAGGTAATTTTTTAGGTTATGAATTACACAATAATAGAAATCTGTTTCTTTCACGACAAGAACTAGACAGTATGGTAACAAAACTGGATCCGAGGCTGTAGATATATCAGATTAGATGAATAATCTTGTTTAGTCGTTTAACGTTACATTCTGCATTCTACTTTCTAGATCAGAATCTGCGAAGCCACCTAGTTCGATCTCGAGCTGCTTCAATGAATTTCGGAGATTGTTGCATGCCTGAAGAAAGCCTTCCGAATTACCATTAAGACTTCCCAACTCTGCCTGCATATTGTCAAGAAAGCTAGAAATTTTCTCAGAAGCTTCTTTAATGGCAGGGACCTCTTGTGGGGGGTAAAGACAAGCTCCAAGCTCGTCCACCTGCACTCCAATTCCTTGGCATAGCCTCAATAGATTCTCCAAGGTTGCTAACTTACTTTCGTTGGTTTCATTTTCCAGCTTAAGCAAACTAGTGATAGAGCGAATGAGTTCCTTAATAACTTTTAGTATTGAAGATATGATGCTAATAGCAGATTGAGCAACTCTCATCTCTTCGGCTGATAAATCGTCACCTATATCGGCATCATCGCTTGTATTACCCTCGTCCTGCGAGTGCAAACTGCTGTCAACTTTGTTAGATGATTCTTCGGGAGCGTCGTCCAAGTCGGAGGGACCTTGTTTAAGCTCCTTCATTTCTCGGAGGACGTCCTTCACTGATACACCAACCTGTATTAGTGCTCGGCCAATTGCAGTTACATTTGTGGAAGGAGCTTTCTTAAGAGCAGAGCAAGCTTCCCAAACTGCACCAACCAACTGCGGAACTACTTGGTTTTGATCCTTACTATCCCGAGGTCCTGAAAAGTTCATTCACCAAGGTTAACACTAGTTCTATCAAAAGAGTAGAACAAAATTGCAAACATGATTTCACAACAACGAATAAATGAATTTAACCCTATCATCAGTACTCCATGATACTGTAATAGATAGTCTAGTTTAACATGAACTCAAGG ATGGGAAGCATTAGCGGTGCTCTGACATCGCATTTGCAGCTTAGTCACTGCCGTTTCTCTGCTAGAACCTCTCACTCTCAGCTTGCTTCAGCTCGAATTGGCCCAACGTCGAGAAGGTCGAAGTTGCGGTTCTCCAGTTTGCTCAGCCGTAGAAATTTCAACAGATTTGTGTGTTCTGCTGTCGATGACGACGTAAGAGAGAAGCAGATGACGGATTTGGGTGGTGGTAATCGTTCCACCGTAGTCGAGGATGTGCCAGATATCGGCGAAAGCTCAACAAATGGGGCTCCAGAAAAAAGTGATGTATATAACTTTCTGTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTATCAGTTTTGGCGGTGGGAGCTGCAATTCTTGGATGCTTTGCATTTTCGAAAGAACTCGTCTTAATTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTGAAGGTATCAGGATACTGTGGCCTTCTCCTTGGAAGTCCTGTCATCCTCTACGAGATTATTGCGTTTGTTCTTCCAGGATTGACAAGGGCAGAAAGACGGTTTCTCGGGCCTATTGTCCTAGGCTCTTCTGTGCTTTTTTACGCAGGAATTGCCTTCTCCTACATAGTTTTGACACCAGCAGCTCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATAGATCAATACTTCGAATTCGTTCTCGTGCTCATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTAATACAGATTCTACTCGGACAACTTGGACTGGTCTCAGGAGACCAAATGTTATCGATTTGGAGATACGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTCCTCACACCATCAACAGACCCCCTAACTCAGGTGCTTCTAGCAGCTCCCCTGCTGGGTCTTTACTTGGGGGGTGCCTGGGTGGTCAAGCTCTCAGGGCGATAG MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSAVDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
BLAST of Cp4.1LG01g13950 vs. Swiss-Prot
Match: TATC_PEA (Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum GN=TATC PE=1 SV=1) HSP 1 Score: 457.2 bits (1175), Expect = 1.6e-127 Identity = 238/315 (75.56%), Postives = 272/315 (86.35%), Query Frame = 1
BLAST of Cp4.1LG01g13950 vs. Swiss-Prot
Match: TATC_ARATH (Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis thaliana GN=TATC PE=1 SV=2) HSP 1 Score: 438.0 bits (1125), Expect = 1.0e-121 Identity = 244/346 (70.52%), Postives = 276/346 (79.77%), Query Frame = 1
BLAST of Cp4.1LG01g13950 vs. Swiss-Prot
Match: TATC_MAIZE (Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays GN=TATC PE=2 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 1.1e-120 Identity = 236/312 (75.64%), Postives = 261/312 (83.65%), Query Frame = 1
BLAST of Cp4.1LG01g13950 vs. Swiss-Prot
Match: TATC_ORYSJ (Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa subsp. japonica GN=TATC PE=2 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 7.9e-119 Identity = 251/370 (67.84%), Postives = 277/370 (74.86%), Query Frame = 1
BLAST of Cp4.1LG01g13950 vs. Swiss-Prot
Match: TATC_SYNY3 (Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=tatC PE=3 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 6.8e-78 Identity = 151/238 (63.45%), Postives = 187/238 (78.57%), Query Frame = 1
BLAST of Cp4.1LG01g13950 vs. TrEMBL
Match: A0A0A0KTA2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611060 PE=3 SV=1) HSP 1 Score: 610.9 bits (1574), Expect = 9.5e-172 Identity = 319/348 (91.67%), Postives = 335/348 (96.26%), Query Frame = 1
BLAST of Cp4.1LG01g13950 vs. TrEMBL
Match: A0A0B0PM57_GOSAR (Sec-independent translocase protein TatC OS=Gossypium arboreum GN=F383_13666 PE=3 SV=1) HSP 1 Score: 489.6 bits (1259), Expect = 3.2e-135 Identity = 272/358 (75.98%), Postives = 295/358 (82.40%), Query Frame = 1
BLAST of Cp4.1LG01g13950 vs. TrEMBL
Match: A0A0D2T199_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G158400 PE=3 SV=1) HSP 1 Score: 488.0 bits (1255), Expect = 9.3e-135 Identity = 269/354 (75.99%), Postives = 293/354 (82.77%), Query Frame = 1
BLAST of Cp4.1LG01g13950 vs. TrEMBL
Match: A0A067KRT6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09288 PE=3 SV=1) HSP 1 Score: 486.9 bits (1252), Expect = 2.1e-134 Identity = 271/361 (75.07%), Postives = 298/361 (82.55%), Query Frame = 1
BLAST of Cp4.1LG01g13950 vs. TrEMBL
Match: A0A061E5P5_THECC (Sec-independent periplasmic protein translocase OS=Theobroma cacao GN=TCM_009037 PE=3 SV=1) HSP 1 Score: 486.5 bits (1251), Expect = 2.7e-134 Identity = 264/358 (73.74%), Postives = 297/358 (82.96%), Query Frame = 1
BLAST of Cp4.1LG01g13950 vs. TAIR10
Match: AT2G01110.1 (AT2G01110.1 Sec-independent periplasmic protein translocase) HSP 1 Score: 438.0 bits (1125), Expect = 5.6e-123 Identity = 244/346 (70.52%), Postives = 276/346 (79.77%), Query Frame = 1
BLAST of Cp4.1LG01g13950 vs. NCBI nr
Match: gi|659091655|ref|XP_008446660.1| (PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucumis melo]) HSP 1 Score: 612.8 bits (1579), Expect = 3.6e-172 Identity = 319/348 (91.67%), Postives = 335/348 (96.26%), Query Frame = 1
BLAST of Cp4.1LG01g13950 vs. NCBI nr
Match: gi|449434578|ref|XP_004135073.1| (PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucumis sativus]) HSP 1 Score: 610.9 bits (1574), Expect = 1.4e-171 Identity = 319/348 (91.67%), Postives = 335/348 (96.26%), Query Frame = 1
BLAST of Cp4.1LG01g13950 vs. NCBI nr
Match: gi|728848095|gb|KHG27538.1| (Sec-independent translocase protein TatC [Gossypium arboreum]) HSP 1 Score: 489.6 bits (1259), Expect = 4.6e-135 Identity = 272/358 (75.98%), Postives = 295/358 (82.40%), Query Frame = 1
BLAST of Cp4.1LG01g13950 vs. NCBI nr
Match: gi|823210415|ref|XP_012438244.1| (PREDICTED: sec-independent protein translocase protein TATC, chloroplastic isoform X2 [Gossypium raimondii]) HSP 1 Score: 488.0 bits (1255), Expect = 1.3e-134 Identity = 269/354 (75.99%), Postives = 293/354 (82.77%), Query Frame = 1
BLAST of Cp4.1LG01g13950 vs. NCBI nr
Match: gi|802620750|ref|XP_012075694.1| (PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Jatropha curcas]) HSP 1 Score: 486.9 bits (1252), Expect = 3.0e-134 Identity = 271/361 (75.07%), Postives = 298/361 (82.55%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |