MELO3C012288.2 (gene) Melon (DHL92) v3.6.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C012288.2
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.6.1)
Description	sec-independent protein translocase protein TATC, chloroplastic
Location	chr10 : 1453432 .. 1456575 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GACTAAGGTCCAGTAAAATAGATGACTCAGATTTTACAAAGTCCTGATTTTTCGGCATAACGCGAAAAGCTGCCATCGATTTTGGATTCAGAAGGTTGAAGAAGAGATGGGAAGCATTAGCGGTTCTCTATCATCGCATTTGCAGCTCAGTCATTGCCGTTTCTCTGCTAGAACCTCTCAGTCTCAGCTTACTTCAGTTCGAATTAGCCCAACGTTGAGAAGGACAAAGTTGCGACTCACCGGTTTTCTGAGCCGTAGAAATTTCAACAGATTCGTGTGTTCTGCTGTCGATGACGATGTAAGAGAGAAGCAGACGGAGTTGGGTGGTGGAAATGGCTCCACCGTCGTTGAGGATGTGCCAGGTACTAGTATTGCCAAAACTGATGACTCGTTTGAAAATCGTGAATTTTTGGAAGTAGTGATCTGATGAAATAGTATTGGTCCTTAATTTTGTCTAGAATTTGATGTAGAAATTACTTACGTTCAATGGAGATGTTTGTTCCGGTTGGATTTTTAGATGAGCTTATGTGGGTTCTGGTTCGAAGGGAGAAGTTCATAAGTTGATTTATTTGGACCCAGGGGAGGAAATATCTAGCTCAAGTTGTTACATCCGAAGTTCTGGATGAAACTTGTTGGAATCCTACACGCTTACTTCACTTGTATCTAAATGTTTATTGCATATCTTGATTTCTACCTATTAAATTATGTGGCTGCAGAATTTTATGCTATAATTGGTATGAATGTTATTAATACTCCATCCTTTTTCATGGAAAAAATATTAGATATTGCCAAGAATTCAACAAACGGCGCTCCGGATAAAAGTGATATTTATAACTTTCTCTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTTTCAGTTTTGGCTGTTGGAGCTGCAATTATTGGATGCTTTGCATTTTCGAAAGATCTCATCTTACTTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTAAAGGTCAGAACTTCGTATGATGAAATCTAATTCCATTATAATAACTTTTTGTGGACCTGTGAATGGTTACCAGCCATTTGGATAGCTACTGACACGAAAATGGCCAATGATACAACAAATCTTGAAAAATGAGAAGAACATGTTTGACTTTAACCAACTTGACTTTAACTTGGGTCAACGGTGATTTAACATGAAGTTGCAGTAAGAGTTGCTAACTTGAAATCTTTGCAACACCATCTCTTATTCATCAACCTCTAACCATTAAACACAAGAAAAATTTGTCTAAATGATGAGAACAAAGAAAAGCTCACTGTAATATGTTATTTGAATTAAAAACTCTTTGCTTATTCAATCAATCTTCCTGGTGTGTGTGTGTGTTGAGTAATACCAAATCACTAGATTCTATAAGACTTACGTCCCTCTCTAAGTCGATGGGTGATACCACAACTTTGAACTATGCCGTCGGGAAATGTTTGTTTCTGATTTTTGTTCAATTCAAAACTGCATTTTACACTCAATACTGCAGCTGTATATTTTTCATATTGGTGGGTGTCAATAACAATAAAATTCTCCTTATGCGTTCCAGGTATCAGGATACTGTGGCCTTCTCCTTGGAAGTCCTGTCATCCTCTATGAGATTATTGCATTTGTTCTTCCAGGATTGACAAGAACAGAACGACAATTTCTGGCACCTATCGTCCTAGGCTCTTCTATACTTTTCTATGCAGGAATTGCCTTCTCCTACATAGTGTTGACGCCAGCAGCCCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTCGAATCCTTGTGGTCCATTGATCAATACTTCGAATTTGTACTTGTTCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTAAAAGTTGTGTTTTTATAATGAATTAACAATCACATCTTTTAGAATGTTGGCCATGCACTAGAAGCTTACTTTTTAGGAACAATCTCAAATCATCACCCAATGGAGCTAAGCATTTTGACAATATAAATTTCATTTTCTTTTCCAGGTTCCAGTAATACAGGTTCTACTTGGACAACTTGGACTCGTCTCAGGAGACCAAATGCTATCAATTTGGAGATATGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTACTCACACCATCAACGGATCCCCTAACTCAGGTACTTCTGGCAGCTCCCCTGCTGGGCCTTTACTTGGGAGGTGCTTGGGTGGTCAAGCTCTCAGGGAGATAGATCCAAATTCAACCCTAATTTTTCAGCCCTTCGAGGATTCTGTACATTCACAAAACTCCTTGATGTAGTGTAATTGTAACACCAATTTATAGAAAGGAATATTTGTTCCATGGATGAATTTTTTTTTTATGAAGCAATAATAGATAGTCTGGTTTCTTTCATGACAAGAACTAAAGCTATAGTAACAAAACTTGGTTGTAAACTCGTCTACCCACGTACATCAACAGTGAGTTATGAGGCAAGAGATACATCAGATTGCATAGAGTATCTTTTAGTTGCTTAAAGTTACATTCTGCATTCTAGTCTCTAGATCAGGAGATGAGAAGCCACCTAGTTCAGTCTCGAGCTGCTTCAAGGAATCTCGAAGATTGTCGCACACCTGAAGAAAGCCTTCAGAATTACCATTAAGACTTTCCAACTCTGCCTGCATATTGTCAAGAAAGCTAAAGATTTTCTCAGAAGCTACTTTAATGGCAGGGCCCTCTTGTGGGGGGTAAAGACAAGCTCCAAGCTCGTCAACCTGCAGTCCAATTCCTTGGCATTGCTTTAATAGATTCTCCAGGGACGCCAAGTTACTTTCCTTGTTTGCATTTTCTAGTTTAAGCAAACTTGTGATAGAGCGAATGAGTTCCTTTATAACTAGAAGTATTGAAGATACAACATTAGTTGCAGATTGGGCGACTCTCATCTCTTCAGCTGACAAATCGTTACCTATATCAGCATCATCGCTTGTATTATCCTCATCTTGCAAATCGCCTTCGACTGCATTAGATAACTCTTCAGGAGCTTTGTCCAGGTCGGAGGAACCTTGTTTAAGCTCCTTCATTTCTCGAAGGACATCCT

mRNA sequence

GACTAAGGTCCAGTAAAATAGATGACTCAGATTTTACAAAGTCCTGATTTTTCGGCATAACGCGAAAAGCTGCCATCGATTTTGGATTCAGAAGGTTGAAGAAGAGATGGGAAGCATTAGCGGTTCTCTATCATCGCATTTGCAGCTCAGTCATTGCCGTTTCTCTGCTAGAACCTCTCAGTCTCAGCTTACTTCAGTTCGAATTAGCCCAACGTTGAGAAGGACAAAGTTGCGACTCACCGGTTTTCTGAGCCGTAGAAATTTCAACAGATTCGTGTGTTCTGCTGTCGATGACGATGTAAGAGAGAAGCAGACGGAGTTGGGTGGTGGAAATGGCTCCACCGTCGTTGAGGATGTGCCAGATATTGCCAAGAATTCAACAAACGGCGCTCCGGATAAAAGTGATATTTATAACTTTCTCTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTTTCAGTTTTGGCTGTTGGAGCTGCAATTATTGGATGCTTTGCATTTTCGAAAGATCTCATCTTACTTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTAAAGGTATCAGGATACTGTGGCCTTCTCCTTGGAAGTCCTGTCATCCTCTATGAGATTATTGCATTTGTTCTTCCAGGATTGACAAGAACAGAACGACAATTTCTGGCACCTATCGTCCTAGGCTCTTCTATACTTTTCTATGCAGGAATTGCCTTCTCCTACATAGTGTTGACGCCAGCAGCCCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTCGAATCCTTGTGGTCCATTGATCAATACTTCGAATTTGTACTTGTTCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTAATACAGGTTCTACTTGGACAACTTGGACTCGTCTCAGGAGACCAAATGCTATCAATTTGGAGATATGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTACTCACACCATCAACGGATCCCCTAACTCAGGTACTTCTGGCAGCTCCCCTGCTGGGCCTTTACTTGGGAGGTGCTTGGGTGGTCAAGCTCTCAGGGAGATAGATCCAAATTCAACCCTAATTTTTCAGCCCTTCGAGGATTCTGTACATTCACAAAACTCCTTGATGTAGTGTAATTGTAACACCAATTTATAGAAAGGAATATTTGTTCCATGGATGAATTTTTTTTTTATGAAGCAATAATAGATAGTCTGGTTTCTTTCATGACAAGAACTAAAGCTATAGTAACAAAACTTGGTTGTAAACTCGTCTACCCACGTACATCAACAGTGAGTTATGAGGCAAGAGATACATCAGATTGCATAGAGTATCTTTTAGTTGCTTAAAGTTACATTCTGCATTCTAGTCTCTAGATCAGGAGATGAGAAGCCACCTAGTTCAGTCTCGAGCTGCTTCAAGGAATCTCGAAGATTGTCGCACACCTGAAGAAAGCCTTCAGAATTACCATTAAGACTTTCCAACTCTGCCTGCATATTGTCAAGAAAGCTAAAGATTTTCTCAGAAGCTACTTTAATGGCAGGGCCCTCTTGTGGGGGGTAAAGACAAGCTCCAAGCTCGTCAACCTGCAGTCCAATTCCTTGGCATTGCTTTAATAGATTCTCCAGGGACGCCAAGTTACTTTCCTTGTTTGCATTTTCTAGTTTAAGCAAACTTGTGATAGAGCGAATGAGTTCCTTTATAACTAGAAGTATTGAAGATACAACATTAGTTGCAGATTGGGCGACTCTCATCTCTTCAGCTGACAAATCGTTACCTATATCAGCATCATCGCTTGTATTATCCTCATCTTGCAAATCGCCTTCGACTGCATTAGATAACTCTTCAGGAGCTTTGTCCAGGTCGGAGGAACCTTGTTTAAGCTCCTTCATTTCTCGAAGGACATCCT

Coding sequence (CDS)

ATGGGAAGCATTAGCGGTTCTCTATCATCGCATTTGCAGCTCAGTCATTGCCGTTTCTCTGCTAGAACCTCTCAGTCTCAGCTTACTTCAGTTCGAATTAGCCCAACGTTGAGAAGGACAAAGTTGCGACTCACCGGTTTTCTGAGCCGTAGAAATTTCAACAGATTCGTGTGTTCTGCTGTCGATGACGATGTAAGAGAGAAGCAGACGGAGTTGGGTGGTGGAAATGGCTCCACCGTCGTTGAGGATGTGCCAGATATTGCCAAGAATTCAACAAACGGCGCTCCGGATAAAAGTGATATTTATAACTTTCTCTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTTTCAGTTTTGGCTGTTGGAGCTGCAATTATTGGATGCTTTGCATTTTCGAAAGATCTCATCTTACTTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTAAAGGTATCAGGATACTGTGGCCTTCTCCTTGGAAGTCCTGTCATCCTCTATGAGATTATTGCATTTGTTCTTCCAGGATTGACAAGAACAGAACGACAATTTCTGGCACCTATCGTCCTAGGCTCTTCTATACTTTTCTATGCAGGAATTGCCTTCTCCTACATAGTGTTGACGCCAGCAGCCCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTCGAATCCTTGTGGTCCATTGATCAATACTTCGAATTTGTACTTGTTCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTAATACAGGTTCTACTTGGACAACTTGGACTCGTCTCAGGAGACCAAATGCTATCAATTTGGAGATATGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTACTCACACCATCAACGGATCCCCTAACTCAGGTACTTCTGGCAGCTCCCCTGCTGGGCCTTTACTTGGGAGGTGCTTGGGTGGTCAAGCTCTCAGGGAGATAG

Protein sequence

MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSAVDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR

Homology

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BLAST of MELO3C012288.2 vs. NCBI nr
Match: XP_008446660.1 (PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucumis melo])

HSP 1 Score: 657.9 bits (1696), Expect = 1.9e-185
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0


Query: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60
           MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA
Sbjct: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of MELO3C012288.2 vs. NCBI nr
Match: XP_004135073.1 (PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucumis sativus] >KGN52124.1 hypothetical protein Csa_5G611060 [Cucumis sativus])

HSP 1 Score: 645.2 bits (1663), Expect = 1.3e-181
Identity = 338/347 (97.41%), Postives = 343/347 (98.85%), Query Frame = 0


Query: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60
           MGSISG+LSSHLQLS CRFSARTSQSQLTSVRISPTLRRTKLR TG L RRNFNRFVCSA
Sbjct: 1   MGSISGALSSHLQLSDCRFSARTSQSQLTSVRISPTLRRTKLRFTGLLRRRNFNRFVCSA 60

Query: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDD+EMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDREMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSY+VLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYVVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of MELO3C012288.2 vs. NCBI nr
Match: XP_022150565.1 (sec-independent protein translocase protein TATC, chloroplastic [Momordica charantia])

HSP 1 Score: 577.8 bits (1488), Expect = 2.5e-161
Identity = 303/347 (87.32%), Postives = 321/347 (92.51%), Query Frame = 0


Query: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60
           MGSISG+L+SHLQL+HC FSART  SQL S RISPT RR+KLR +G LSRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLNHCHFSART--SQLASARISPTSRRSKLRFSGLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120
           VDDDV EKQTELGGGNGST+VED PDIA+NST+ AP+K DIYNFLYPSK+LLPDDKEMSV
Sbjct: 61  VDDDVIEKQTELGGGNGSTIVEDGPDIAQNSTDEAPEKGDIYNFLYPSKELLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVG AI+GCFAFSK+LIL+LEAPVKEQGVRFLQL PGEFFFTT+
Sbjct: 121 FDHLEELRQRIFVSVLAVGGAIVGCFAFSKELILILEAPVKEQGVRFLQLAPGEFFFTTV 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLT+ ER+FL PIVLG          FSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTKAERRFLGPIVLGXXXXXXXXXXFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAA+LTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAILTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 345

[Close]

BLAST of MELO3C012288.2 vs. NCBI nr
Match: XP_022956650.1 (sec-independent protein translocase protein TATC, chloroplastic [Cucurbita moschata])

HSP 1 Score: 563.5 bits (1451), Expect = 4.9e-157
Identity = 297/347 (85.59%), Postives = 312/347 (89.91%), Query Frame = 0


Query: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60
           MGSISG+L+SHLQLSHCRFSA                 R+KLR +  LSRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSAXXXXXXXXXXXXXXXXXRSKLRFSSLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQT+LGGGN STVVEDVPDIA++STNGAP+KSD+YNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSK+L+L+LEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVL            SYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLXXXXXXXXXXXXSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of MELO3C012288.2 vs. NCBI nr
Match: XP_023539458.1 (sec-independent protein translocase protein TATC, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 557.4 bits (1435), Expect = 3.5e-155
Identity = 296/348 (85.06%), Postives = 311/348 (89.37%), Query Frame = 0


Query: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60
           MGSISG+L+SHLQLSHCRFSA                 R+KLR +  LSRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSAXXXXXXXXXXXXXXXXXRSKLRFSSLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQ-TELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMS 120
           VDDDVREKQ T+LGGGN STVVEDVPDI ++STNGAP+KSD+YNFLYPSKDLLPDDKEMS
Sbjct: 61  VDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120

Query: 121 VFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTT 180
           VFDHLEELRQRIFVSVLAVGAAI+GCFAFSK+L+L+LEAPVKEQGVRFLQLGPGEFFFTT
Sbjct: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180

Query: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTP 240
           LKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVL            SYIVLTP
Sbjct: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLXXXXXXXXXXXXSYIVLTP 240

Query: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLS 300
           AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLS
Sbjct: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300

Query: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348

[Close]

BLAST of MELO3C012288.2 vs. TAIR10
Match: AT2G01110.1 (Sec-independent periplasmic protein translocase)

HSP 1 Score: 436.8 bits (1122), Expect = 1.2e-122
Identity = 242/345 (70.14%), Postives = 277/345 (80.29%), Query Frame = 0


Query: 3   SISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSAVD 62
           S S +L  H +L+     + T Q    +V    + R   LR +    RR+      SA++
Sbjct: 5   STSSALIHHFRLTTRNLGSPTKQRCPYAVTFCNSWREAGLRYS-VTQRRSKGFGPVSALN 64

Query: 63  DDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSVFD 122
           DD  +  TE   G GS V +  PD +++ +      S +Y FLYP K+ LPDDKEM++FD
Sbjct: 65  DD--DSPTETTPGVGSAVEDRPPDSSEDRS------SSVYEFLYPRKEELPDDKEMTIFD 124

Query: 123 HLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTLKV 182
           HLEELR+RIFVSVLAVGAAI+GCFAFSKDLI+ LEAPVK QGVRFLQL PGEFFFTTLKV
Sbjct: 125 HLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLKV 184

Query: 183 SGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAAL 242
           SGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIV GSS+LFYAG+AFSY VLTPAAL
Sbjct: 185 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAAL 244

Query: 243 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSIWR 302
           NFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQ+G+VSGDQMLSIWR
Sbjct: 245 NFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIWR 304

Query: 303 YVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           YVVVGAVVAAAV+TPSTDP+TQ+LLA PLLGLYLGGAW+VKL+GR
Sbjct: 305 YVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340

[Close]

BLAST of MELO3C012288.2 vs. Swiss-Prot
Match: sp|Q94G17|TATC_PEA (Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum OX=3888 GN=TATC PE=1 SV=1)

HSP 1 Score: 450.3 bits (1157), Expect = 2.0e-125
Identity = 230/310 (74.19%), Postives = 268/310 (86.45%), Query Frame = 0


Query: 51  RNFNRFVCSAVDDDVREKQ--------TELGGG-----NGSTVVEDVPDIAKNSTNGAPD 110
           ++F+R VC AVDD++REKQ        T LG           +++ + + A  +     +
Sbjct: 44  KSFDRLVCFAVDDEIREKQQQQLSTSSTRLGSAVEERPENKDMIDGISEEALENFKEDGE 103

Query: 111 KSDIYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLE 170
           +S IY+FLYPSK+LLPDDKEMS+FDHLEELR+RIF+SVL VG +I+GCFAFSKDL+ +LE
Sbjct: 104 RSAIYDFLYPSKELLPDDKEMSIFDHLEELRERIFISVLGVGGSILGCFAFSKDLVKILE 163

Query: 171 APVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAP 230
           APVK +GVRFLQL PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAF++PGLT+ ER+FL P
Sbjct: 164 APVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFIIPGLTKEERKFLGP 223

Query: 231 IVLGSSILFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSF 290
           IVLGSS+LFYAGI FSY+VL PAALNFFV+YAEGAVESLWSIDQYFEFVLVLMFSTGLSF
Sbjct: 224 IVLGSSVLFYAGITFSYLVLVPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFSTGLSF 283

Query: 291 QVPVIQVLLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLG 348
           QVP+IQ+LLGQLGLVSGD+MLS+WRYVVVGAVVAAAV+TPSTDPLTQVLLAAPLLGLYLG
Sbjct: 284 QVPIIQLLLGQLGLVSGDKMLSVWRYVVVGAVVAAAVVTPSTDPLTQVLLAAPLLGLYLG 343

[Close]

BLAST of MELO3C012288.2 vs. Swiss-Prot
Match: sp|Q9SJV5|TATC_ARATH (Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TATC PE=1 SV=2)

HSP 1 Score: 436.8 bits (1122), Expect = 2.2e-121
Identity = 242/345 (70.14%), Postives = 277/345 (80.29%), Query Frame = 0


Query: 3   SISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSAVD 62
           S S +L  H +L+     + T Q    +V    + R   LR +    RR+      SA++
Sbjct: 5   STSSALIHHFRLTTRNLGSPTKQRCPYAVTFCNSWREAGLRYS-VTQRRSKGFGPVSALN 64

Query: 63  DDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSVFD 122
           DD  +  TE   G GS V +  PD +++ +      S +Y FLYP K+ LPDDKEM++FD
Sbjct: 65  DD--DSPTETTPGVGSAVEDRPPDSSEDRS------SSVYEFLYPRKEELPDDKEMTIFD 124

Query: 123 HLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTLKV 182
           HLEELR+RIFVSVLAVGAAI+GCFAFSKDLI+ LEAPVK QGVRFLQL PGEFFFTTLKV
Sbjct: 125 HLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLKV 184

Query: 183 SGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAAL 242
           SGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIV GSS+LFYAG+AFSY VLTPAAL
Sbjct: 185 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAAL 244

Query: 243 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSIWR 302
           NFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQ+G+VSGDQMLSIWR
Sbjct: 245 NFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIWR 304

Query: 303 YVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           YVVVGAVVAAAV+TPSTDP+TQ+LLA PLLGLYLGGAW+VKL+GR
Sbjct: 305 YVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340

[Close]

BLAST of MELO3C012288.2 vs. Swiss-Prot
Match: sp|C4IZX0|TATC_MAIZE (Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays OX=4577 GN=TATC PE=2 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 1.1e-120
Identity = 238/330 (72.12%), Postives = 266/330 (80.61%), Query Frame = 0


Query: 35  PTLRRTKLRLTGFLS------RRNFNRFVCSAVDDD--VREK----QTELGGGNGSTVVE 94
           P LR+  L L    +      RR      C+AVD D  +RE     Q E         +E
Sbjct: 27  PLLRQRNLPLISLAAPALEPERRRRQCLRCAAVDGDGALRESGPLPQKESPSSGIGAALE 86

Query: 95  DVP--DIAKNSTNGAP---DKSDIYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLA 154
           D P     +N + G P   ++S +Y FLYPSKDLLPDDKEMS+FDHLEELR RIF+SVLA
Sbjct: 87  DPPPGPPVENGSFGGPSQEEQSALYTFLYPSKDLLPDDKEMSIFDHLEELRDRIFISVLA 146

Query: 155 VGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILY 214
           VGAAI+GCFAFSKDL++ LEAPV  QGVRFLQL PGEFFFTTLKVSGYCGLLLGSP+ILY
Sbjct: 147 VGAAILGCFAFSKDLVIFLEAPVTAQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSPIILY 206

Query: 215 EIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNFFVSYAEGAVESLW 274
           EIIAFV+PGLTR ER+FL PIVLGSS+LFY GI FSY VL+PAALNFFV+YA+GAVESLW
Sbjct: 207 EIIAFVIPGLTRDERKFLGPIVLGSSVLFYLGIFFSYTVLSPAALNFFVNYADGAVESLW 266

Query: 275 SIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTP 334
           SIDQYFEF+LVLMFSTGLSFQVPVIQ+LLGQLGLVS DQMLSIWRYVVVGAVVAAAVLTP
Sbjct: 267 SIDQYFEFILVLMFSTGLSFQVPVIQLLLGQLGLVSSDQMLSIWRYVVVGAVVAAAVLTP 326

Query: 335 STDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           STDPLTQ+LLA PLLGLYLGGAW+VK++GR
Sbjct: 327 STDPLTQMLLAGPLLGLYLGGAWMVKITGR 356

[Close]

BLAST of MELO3C012288.2 vs. Swiss-Prot
Match: sp|Q9AVE6|TATC_ORYSJ (Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TATC PE=2 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 5.5e-120
Identity = 231/315 (73.33%), Postives = 259/315 (82.22%), Query Frame = 0


Query: 48  LSRRNFNRFVCSAVD-----------DDVREKQTELGGGNGSTVVEDVPDIAKNSTNGA- 107
           LS R+     C+AVD               +++    G  G+ + +  P   +N + G  
Sbjct: 45  LSCRHGRHLRCAAVDGGAGRETERPSPPAPQREESPSGSLGAALEDPSPQPVQNGSFGGI 104

Query: 108 ---PDKSDIYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDL 167
               ++S +YNFLYPSK+LLPDDKEMS+FDHLEELR RIFVSVLAVGAAI+GCFA+SKDL
Sbjct: 105 TEDEEQSSLYNFLYPSKELLPDDKEMSIFDHLEELRDRIFVSVLAVGAAILGCFAYSKDL 164

Query: 168 ILLLEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTER 227
           I +LEAPV  QGVRFLQL PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER
Sbjct: 165 IRILEAPVSVQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRDER 224

Query: 228 QFLAPIVLGSSILFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFS 287
           +FL PIVLGSS+LFY GI FSY VL PAALNFFV+YA+GAVESLWSIDQYFEFVLVL+FS
Sbjct: 225 KFLGPIVLGSSVLFYLGIFFSYTVLAPAALNFFVNYADGAVESLWSIDQYFEFVLVLLFS 284

Query: 288 TGLSFQVPVIQVLLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLL 347
           TGLSFQVPVIQ+LLGQ+GLVS DQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLA PLL
Sbjct: 285 TGLSFQVPVIQLLLGQVGLVSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLL 344

[Close]

BLAST of MELO3C012288.2 vs. Swiss-Prot
Match: sp|P54086|TATC_SYNY3 (Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=tatC PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 5.8e-77
Identity = 148/238 (62.18%), Postives = 186/238 (78.15%), Query Frame = 0


Query: 110 DLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQ 169
           D +PDD EMS+FDHL+ELR RIF+S+ AV   ++ CF F K L+  L+ P     V+FLQ
Sbjct: 19  DEVPDDVEMSLFDHLDELRTRIFLSLGAVLVGVVACFIFVKPLVQWLQVPAGT--VKFLQ 78

Query: 170 LGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAG 229
           L PGEFFF ++KV+GY G+L+ SP ILY+II FVLPGLTR ER+ L P+VLGSS+LF+AG
Sbjct: 79  LSPGEFFFVSVKVAGYSGILVMSPFILYQIIQFVLPGLTRRERRLLGPVVLGSSVLFFAG 138

Query: 230 IAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQL 289
           + F+Y  L PAAL FFVSY    VE LWSID+YFEFVL+LMFSTGL+FQ+P+IQV+LG L
Sbjct: 139 LGFAYYALIPAALKFFVSYGADVVEQLWSIDKYFEFVLLLMFSTGLAFQIPIIQVVLGFL 198

Query: 290 GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           G+VS +QML  WR+V++GA+V  A+LTPSTDPLTQ LLA  +LGLY GG   V+L G+
Sbjct: 199 GIVSSEQMLKGWRFVILGAMVLGAILTPSTDPLTQSLLAGAVLGLYFGGIGCVRLLGK 254

[Close]

BLAST of MELO3C012288.2 vs. TrEMBL
Match: tr|A0A1S3BG97|A0A1S3BG97_CUCME (sec-independent protein translocase protein TATC, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489323 PE=3 SV=1)

HSP 1 Score: 657.9 bits (1696), Expect = 1.3e-185
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0


Query: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60
           MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA
Sbjct: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of MELO3C012288.2 vs. TrEMBL
Match: tr|A0A0A0KTA2|A0A0A0KTA2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611060 PE=3 SV=1)

HSP 1 Score: 645.2 bits (1663), Expect = 8.4e-182
Identity = 338/347 (97.41%), Postives = 343/347 (98.85%), Query Frame = 0


Query: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60
           MGSISG+LSSHLQLS CRFSARTSQSQLTSVRISPTLRRTKLR TG L RRNFNRFVCSA
Sbjct: 1   MGSISGALSSHLQLSDCRFSARTSQSQLTSVRISPTLRRTKLRFTGLLRRRNFNRFVCSA 60

Query: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDD+EMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDREMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSY+VLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYVVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of MELO3C012288.2 vs. TrEMBL
Match: tr|A0A218W749|A0A218W749_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr017609 PE=3 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 3.2e-133
Identity = 269/358 (75.14%), Postives = 303/358 (84.64%), Query Frame = 0


Query: 1   MGSISGSLSSHLQLSHCRFSARTS-QSQLTSVRIS-PTLRRTKLRLTGFLSRRNFNRFVC 60
           MGS S +L  HLQL+ C F+   S ++Q+TS RI     RRT+LRL   +S +  + F C
Sbjct: 1   MGSTSAALVPHLQLNGCCFNRLDSVKTQVTSFRIDWSRRRRTELRL---MSSKRLSSFAC 60

Query: 61  SAVDDDVREKQTELGGGNG--STVVEDVPDIAKNST-------NGAPDKSDIYNFLYPSK 120
           SAV+DD   KQ EL  G+G   + VED PD   +S        +   +K+ +Y+FLYP+K
Sbjct: 61  SAVEDD---KQQELRSGDGGLGSAVEDRPDTTDSSREENLGTFSQDDEKNALYDFLYPNK 120

Query: 121 DLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQ 180
           +LLPDDKEMS+FDHLEELRQRIFVSVL+VGAA++GCFAFSK+LI++LEAPVK QGVRFLQ
Sbjct: 121 ELLPDDKEMSIFDHLEELRQRIFVSVLSVGAAMLGCFAFSKELIMVLEAPVKAQGVRFLQ 180

Query: 181 LGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAG 240
           L PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTR+ER+FL PIVLGSS+LFYAG
Sbjct: 181 LAPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRSERRFLGPIVLGSSVLFYAG 240

Query: 241 IAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQL 300
           I FSY+VLTPAALNFFVSYAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQ+
Sbjct: 241 IVFSYLVLTPAALNFFVSYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQV 300

Query: 301 GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKL+GR
Sbjct: 301 GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLTGR 352

[Close]

BLAST of MELO3C012288.2 vs. TrEMBL
Match: tr|A0A067KRT6|A0A067KRT6_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_09288 PE=3 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 4.0e-131
Identity = 265/360 (73.61%), Postives = 298/360 (82.78%), Query Frame = 0


Query: 1   MGSISGSLSSHLQLSHCRF----SARTSQSQLTSVRIS-----PTLRRTKLRLTGFLSRR 60
           MG+ + +L  HLQL  C +    S +  Q Q  S++ +      +LRR +LR  G  + R
Sbjct: 1   MGTTATALIPHLQLHGCFYRCFDSIKNHQQQPASLQFNXXXXXXSLRRGRLRFDGSPNTR 60

Query: 61  NFNRFVC-SAVDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNG---APDKSDIYNFLYP 120
           +F++ VC +AVDDD+ EKQ  L     S+ +ED  D+  +S        + S IYNFLYP
Sbjct: 61  SFSKVVCFAAVDDDIGEKQ--LDSPTTSSALEDRADMLDSSQENFGQDTEGSAIYNFLYP 120

Query: 121 SKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRF 180
           SK+LLPDDKEMS+FDHLEELRQRIFVSVLAVG AI+GCFAFSK+LI+LLEAPVK QGVRF
Sbjct: 121 SKELLPDDKEMSIFDHLEELRQRIFVSVLAVGGAILGCFAFSKELIMLLEAPVKVQGVRF 180

Query: 181 LQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFY 240
           LQL PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAFVLPGLTR ER+FL PIVLGSS+LFY
Sbjct: 181 LQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFY 240

Query: 241 AGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLG 300
           AGIAFSY+VLTPAALNFFVSYAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ LLG
Sbjct: 241 AGIAFSYLVLTPAALNFFVSYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLG 300

Query: 301 QLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           Q+GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKL+GR
Sbjct: 301 QVGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAAPLLGLYLGGAWVVKLTGR 358

[Close]

BLAST of MELO3C012288.2 vs. TrEMBL
Match: tr|A0A0B0PM57|A0A0B0PM57_GOSAR (Sec-independent translocase protein TatC OS=Gossypium arboreum OX=29729 GN=F383_13666 PE=3 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.2e-130
Identity = 268/360 (74.44%), Postives = 294/360 (81.67%), Query Frame = 0


Query: 1   MGS--ISGSLSSHLQLSHCRF----SARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFN 60
           MGS   S +L SHLQL+ C F    S RT Q +  S++   + RR KL        + F 
Sbjct: 1   MGSANTSAALISHLQLNRCCFKLVESTRT-QLEFNSLKFRLS-RRGKLEFAASRRGKGFR 60

Query: 61  RFVC-SAVDDDVRE-KQTELGGGNGSTVVEDVPDIAKNSTNGAP-----DKSDIYNFLYP 120
             VC +AVDDDV+E +Q        ++  ED PD+A  S   AP     + S +YNFLYP
Sbjct: 61  TAVCFAAVDDDVKENRQQVFSETRSASATEDRPDVANISPEEAPFEQNNEGSSLYNFLYP 120

Query: 121 SKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRF 180
            KDLLPDDKEM++FDHLEELRQRIFVSVLAVGAAI+GCFAFSK+LI+ LEAPVK QGVRF
Sbjct: 121 DKDLLPDDKEMTIFDHLEELRQRIFVSVLAVGAAILGCFAFSKELIVFLEAPVKAQGVRF 180

Query: 181 LQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFY 240
           LQL PGEFFFTTLKVSGYCGLLLGSPVILYEII+FVLPGLTR ER+FL PIVLGSS+LFY
Sbjct: 181 LQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIISFVLPGLTRAERRFLGPIVLGSSVLFY 240

Query: 241 AGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLG 300
           AGIAFSY+VLTPAALNFFVSYAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ LLG
Sbjct: 241 AGIAFSYLVLTPAALNFFVSYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLG 300

Query: 301 QLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           QLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKL+GR
Sbjct: 301 QLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAAPLLGLYLGGAWVVKLTGR 358

The following BLAST results are available for this feature:

BLAST of MELO3C012288.2 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008446660.1	1.9e-185	100.00	PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucu...	[more]
XP_004135073.1	1.3e-181	97.41	PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucu...	[more]
XP_022150565.1	2.5e-161	87.32	sec-independent protein translocase protein TATC, chloroplastic [Momordica chara...	[more]
XP_022956650.1	4.9e-157	85.59	sec-independent protein translocase protein TATC, chloroplastic [Cucurbita mosch...	[more]
XP_023539458.1	3.5e-155	85.06	sec-independent protein translocase protein TATC, chloroplastic [Cucurbita pepo ...	[more]

BLAST of MELO3C012288.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01110.1	1.2e-122	70.14	Sec-independent periplasmic protein translocase	[more]

BLAST of MELO3C012288.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94G17\|TATC_PEA	2.0e-125	74.19	Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum...	[more]
sp\|Q9SJV5\|TATC_ARATH	2.2e-121	70.14	Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis t...	[more]
sp\|C4IZX0\|TATC_MAIZE	1.1e-120	72.12	Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays OX=4...	[more]
sp\|Q9AVE6\|TATC_ORYSJ	5.5e-120	73.33	Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa ...	[more]
sp\|P54086\|TATC_SYNY3	5.8e-77	62.18	Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PC...	[more]

BLAST of MELO3C012288.2 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BG97\|A0A1S3BG97_CUCME	1.3e-185	100.00	sec-independent protein translocase protein TATC, chloroplastic OS=Cucumis melo ...	[more]
tr\|A0A0A0KTA2\|A0A0A0KTA2_CUCSA	8.4e-182	97.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611060 PE=3 SV=1	[more]
tr\|A0A218W749\|A0A218W749_PUNGR	3.2e-133	75.14	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr017609 PE=3 SV=1	[more]
tr\|A0A067KRT6\|A0A067KRT6_JATCU	4.0e-131	73.61	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_09288 PE=3 SV=1	[more]
tr\|A0A0B0PM57\|A0A0B0PM57_GOSAR	1.2e-130	74.44	Sec-independent translocase protein TatC OS=Gossypium arboreum OX=29729 GN=F383_...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR019820	Sec-indep_translocase_CS
IPR002033	TatC

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0071806	protein transmembrane transport
biological_process	GO:0042793	transcription from plastid promoter
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0006364	rRNA processing
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0009567	double fertilization forming a zygote and endosperm
biological_process	GO:0009902	chloroplast relocation
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0031361	integral component of thylakoid membrane
cellular_component	GO:0043235	receptor complex
cellular_component	GO:0033281	TAT protein transport complex
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0009977	proton motive force dependent protein transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012288.2.1	MELO3C012288.2.1	mRNA

InterPro

Analysis Name: InterPro Annotations of melon v3.6.1
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002033	Sec-independent periplasmic protein translocase TatC	PRINTS	PR01840	TATCFAMILY	coord: 119..146 score: 38.75 coord: 193..211 score: 54.82 coord: 211..237 score: 41.86 coord: 262..290 score: 45.61
IPR002033	Sec-independent periplasmic protein translocase TatC	PFAM	PF00902	TatC	coord: 122..330 e-value: 8.4E-62 score: 208.6
IPR002033	Sec-independent periplasmic protein translocase TatC	TIGRFAM	TIGR00945	TIGR00945	coord: 121..335 e-value: 6.0E-80 score: 266.1
IPR002033	Sec-independent periplasmic protein translocase TatC	PANTHER	PTHR30371	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC	coord: 79..347
IPR002033	Sec-independent periplasmic protein translocase TatC	HAMAP	MF_00902	TatC	coord: 115..347 score: 15.1
None	No IPR available	PANTHER	PTHR30371:SF3	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC, CHLOROPLASTIC	coord: 79..347
IPR019820	Sec-independent periplasmic protein translocase, conserved site	PROSITE	PS01218	TATC	coord: 262..281

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C012288.2	Csa5G611060	Cucumber (Chinese Long) v2	cumedB359
MELO3C012288.2	CSPI05G25690	Wild cucumber (PI 183967)	cpimedB363
MELO3C012288.2	CmaCh04G014780	Cucurbita maxima (Rimu)	cmamedB726
MELO3C012288.2	CmoCh04G015490	Cucurbita moschata (Rifu)	cmomedB720
MELO3C012288.2	Lsi04G002100	Bottle gourd (USVL1VR-Ls)	lsimedB297
MELO3C012288.2	Cp4.1LG01g13950	Cucurbita pepo (Zucchini)	cpemedB423
MELO3C012288.2	CsGy5G025120	Cucumber (Gy14) v2	cgybmedB318
MELO3C012288.2	Cla020433	Watermelon (97103) v1	medwmB061
MELO3C012288.2	ClCG05G022340	Watermelon (Charleston Gray)	medwcgB061
MELO3C012288.2	Cla97C05G104130	Watermelon (97103) v2	medwmbB056
MELO3C012288.2	Bhi07G001055	Wax gourd	medwgoB071
MELO3C012288.2	Carg01865	Silver-seed gourd	carmedB0846
MELO3C012288.2	CsaV3_5G034760	Cucumber (Chinese Long) v3	cucmedB375

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C012288.2	Cucumber (Chinese Long) v3	cucmedB006
MELO3C012288.2	Cucumber (Chinese Long) v3	cucmedB366
MELO3C012288.2	Watermelon (97103) v2	medwmbB038
MELO3C012288.2	Watermelon (97103) v2	medwmbB059
MELO3C012288.2	Wax gourd	medwgoB052
MELO3C012288.2	Cucumber (Gy14) v2	cgybmedB316
MELO3C012288.2	Cucumber (Gy14) v1	cgymedB464
MELO3C012288.2	Cucumber (Gy14) v1	cgymedB471
MELO3C012288.2	Cucurbita maxima (Rimu)	cmamedB301
MELO3C012288.2	Cucurbita maxima (Rimu)	cmamedB408
MELO3C012288.2	Cucurbita maxima (Rimu)	cmamedB747
MELO3C012288.2	Cucurbita moschata (Rifu)	cmomedB288
MELO3C012288.2	Cucurbita moschata (Rifu)	cmomedB395
MELO3C012288.2	Cucurbita moschata (Rifu)	cmomedB744
MELO3C012288.2	Cucurbita pepo (Zucchini)	cpemedB028
MELO3C012288.2	Cucurbita pepo (Zucchini)	cpemedB187
MELO3C012288.2	Wild cucumber (PI 183967)	cpimedB356
MELO3C012288.2	Cucumber (Chinese Long) v2	cumedB353
MELO3C012288.2	Melon (DHL92) v3.6.1	medmedB002
MELO3C012288.2	Melon (DHL92) v3.6.1	medmedB025
MELO3C012288.2	Bottle gourd (USVL1VR-Ls)	lsimedB018
MELO3C012288.2	Watermelon (Charleston Gray)	medwcgB053
MELO3C012288.2	Watermelon (97103) v1	medwmB065
MELO3C012288.2	Silver-seed gourd	carmedB0804
MELO3C012288.2	Silver-seed gourd	carmedB1031