Carg01865 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01865
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Sec-independent translocase protein TatC
Location	Cucurbita_argyrosperma_scaffold_003 : 839379 .. 841614 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGCATTAGCGGTGCTCTGACATCGCATTTGCAGCTCAGTCACTGCCGTTTCTCTGCTAGAACCTCTCACTCTCAGCTTGCTTCAGCTCGAATTGGCCCAACATCGAGAAGGTCGAAGTTGCGGTTCTCCAGTTTGCTCAGCCGTAGAAATTTCAACAGATTTGTGTGTTCTGCTGTCGATGACGATGTAAGAGAGAAGCAGACGGATTTGGGTGGTGGAAATCGTTCCACCGTCGTCGAGGATGTGCCAGGTACTAATATTACCAAAACCATGATTGATATCAAGGTCTTTTCGCCTGAAAATCGTGTTTGGTTATAGTTTGCGATTCCGAACCGTTTTGGAAGCTTTTTGTGACATGGTTAAACTGCTTATTTCTTTGGTTTTCCCTTATTAGCAATCGGATTATGTAGAGTTCGTCATTAATTTTGTTTAGATTGTGCACGTGATAGGATTAATCCTAGAAATTACCTGTGTCTAATAGAGAAGCATGTCCTGGTTAGATATTTAGCTGAGCTTACGTGAGTCCAGGATTTGAAGGTAGAAGTTCATAAATGGATTTCTGTGAATCCTTTATCCAGGAGGGATAAAACTTATTGGGACTGTTCATGGTTTCAGATTTAAATGTTCATTGCACATATTTGCTCCTACCTATTGAATTATGTGGCTTCAGAAAGTTGATGCTATAATCGATATACAAGTTGCTAATACCCCATTTTTTCATGGAAAAATAAATAGATATCGCCGAAAGCTCAACAAATGGGGCTCCAGAAAAAAGTGATGTATATAACTTTCTGTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTATCAGTTTTGGCGGTGGGAGCTGCAATTCTTGGATGCTTTGCATTTTCGAAAGAACTCGTCTTAATTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTGAAGGTCAGAACTTTGAATGATGAAATATAATTGCATTATTAGTATAATCATGGTGACCATCCATTTGGGTAGCTATTGATACTAAAATTAGATACAACAACAAGAATCTAATTAGATATTAAGAACATAGAAAAGTACACTGTATATCGTTATTTGAAATCAGCTTTTTAGTTATATGATGATTGTGCACTAGGATGCATTCTGAATATGCGAACGTAATGAAGCTATGGCGTCGCTTACCCTTTTTATTTGTTAGTATCTCGATGTTGAATTAAAACACTTTCCTTATTGTATCTATCTTTTTGGTGTGTATTTATATTAAGAGTCTTGTGGAGGAGAATTTCGCACTGATCTTGCTACAGAAGTGAGAAAGTGCTCTGCGATGGGTCGTGTCGAATCTTAAGATAGCGCATGTTTCAATTGTAGTTCTTCGGTTGAGTTCGTTCTTTTATTCAAATGCAGCCCATTCTTCATTCCCAATATTAAATATTGTTTCTGATTTGTGTTTAATTCCAAAATTCATTCTCCACTTCCCATATGCAGTTGTATATTAGCGCATGTTGTTGATGGGGGTCAATAACAGTAAAATTCTCCTTGTGCGCTACAGGTATCAGGATACTGTGGCCTTCTTCTTGGAAGTCCTGTCATCCTCTATGAGATTATTGCGTTTGTTCTTCCAGGATTGACAAGGGCAGAAAGACGGTTTCTTGGGCCTATCGTCCTAGGTTCTTCTGTGCTTTTTTATGCAGGAATTGCCTTCTCCTACATAGTTTTGACACCAGCAGCTCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATAGATCAATACTTCGAATTCGTTCTCGTGCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTAAAGATTTTGCTTCATAAATGAATTGGCAGTGATATCCAATAGTAAATCATTCATGGTAAGAGCTAGCTTTTTGACAGCGTTCATTTCATCTTATTTGTAGGTTCCAGTAATACAGATTCTACTCGGACAACTTGGACTGGTCTCAGGAGACCAAATGTTATCGATTTGGAGATACGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTACTCACACCATCAACAGACCCCCTAACTCAGGTGCTTCTAGCAGCTCCCCTGCTGGGTCTTTACTTGGGGGGTGCCTGGGTGGTCAAGCTCTCAGGGCGATAG

mRNA sequence

ATGGGAAGCATTAGCGGTGCTCTGACATCGCATTTGCAGCTCAGTCACTGCCGTTTCTCTGCTAGAACCTCTCACTCTCAGCTTGCTTCAGCTCGAATTGGCCCAACATCGAGAAGGTCGAAGTTGCGGTTCTCCAGTTTGCTCAGCCGTAGAAATTTCAACAGATTTGTGTGTTCTGCTGTCGATGACGATGTAAGAGAGAAGCAGACGGATTTGGGTGGTGGAAATCGTTCCACCGTCGTCGAGGATGTGCCAGATATCGCCGAAAGCTCAACAAATGGGGCTCCAGAAAAAAGTGATGTATATAACTTTCTGTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTATCAGTTTTGGCGGTGGGAGCTGCAATTCTTGGATGCTTTGCATTTTCGAAAGAACTCGTCTTAATTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTGAAGGTATCAGGATACTGTGGCCTTCTTCTTGGAAGTCCTGTCATCCTCTATGAGATTATTGCGTTTGTTCTTCCAGGATTGACAAGGGCAGAAAGACGGTTTCTTGGGCCTATCGTCCTAGGTTCTTCTGTGCTTTTTTATGCAGGAATTGCCTTCTCCTACATAGTTTTGACACCAGCAGCTCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATAGATCAATACTTCGAATTCGTTCTCGTGCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTAATACAGATTCTACTCGGACAACTTGGACTGGTCTCAGGAGACCAAATGTTATCGATTTGGAGATACGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTACTCACACCATCAACAGACCCCCTAACTCAGGTGCTTCTAGCAGCTCCCCTGCTGGGTCTTTACTTGGGGGGTGCCTGGGTGGTCAAGCTCTCAGGGCGATAG

Coding sequence (CDS)

ATGGGAAGCATTAGCGGTGCTCTGACATCGCATTTGCAGCTCAGTCACTGCCGTTTCTCTGCTAGAACCTCTCACTCTCAGCTTGCTTCAGCTCGAATTGGCCCAACATCGAGAAGGTCGAAGTTGCGGTTCTCCAGTTTGCTCAGCCGTAGAAATTTCAACAGATTTGTGTGTTCTGCTGTCGATGACGATGTAAGAGAGAAGCAGACGGATTTGGGTGGTGGAAATCGTTCCACCGTCGTCGAGGATGTGCCAGATATCGCCGAAAGCTCAACAAATGGGGCTCCAGAAAAAAGTGATGTATATAACTTTCTGTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTATCAGTTTTGGCGGTGGGAGCTGCAATTCTTGGATGCTTTGCATTTTCGAAAGAACTCGTCTTAATTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTGAAGGTATCAGGATACTGTGGCCTTCTTCTTGGAAGTCCTGTCATCCTCTATGAGATTATTGCGTTTGTTCTTCCAGGATTGACAAGGGCAGAAAGACGGTTTCTTGGGCCTATCGTCCTAGGTTCTTCTGTGCTTTTTTATGCAGGAATTGCCTTCTCCTACATAGTTTTGACACCAGCAGCTCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTTGAATCCTTGTGGTCCATAGATCAATACTTCGAATTCGTTCTCGTGCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTAATACAGATTCTACTCGGACAACTTGGACTGGTCTCAGGAGACCAAATGTTATCGATTTGGAGATACGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTACTCACACCATCAACAGACCCCCTAACTCAGGTGCTTCTAGCAGCTCCCCTGCTGGGTCTTTACTTGGGGGGTGCCTGGGTGGTCAAGCTCTCAGGGCGATAG

Protein sequence

MGSISGALTSHLQLSHCRFSARTSHSQLASARIGPTSRRSKLRFSSLLSRRNFNRFVCSAVDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR

Homology

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BLAST of Carg01865 vs. NCBI nr
Match: XP_022956650.1 (sec-independent protein translocase protein TATC, chloroplastic [Cucurbita moschata])

HSP 1 Score: 597.4 bits (1539), Expect = 3.0e-167
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSAXXXXXXXXXXXXXXXXXRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRFSAXXXXXXXXXXXXXXXXXRSKLRFSSLLSRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSAXXXXXXXXXXXXXXXXXRSKLRFSSLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLXXXXXXXXXXXXSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLXXXXXXXXXXXXSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLXXXXXXXXXXXXSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

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BLAST of Carg01865 vs. NCBI nr
Match: XP_023539458.1 (sec-independent protein translocase protein TATC, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 591.3 bits (1523), Expect = 2.2e-165
Identity = 346/348 (99.43%), Postives = 346/348 (99.43%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSAXXXXXXXXXXXXXXXXXRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRFSAXXXXXXXXXXXXXXXXXRSKLRFSSLLSRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFSAXXXXXXXXXXXXXXXXXRSKLRFSSLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQ-TDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120
           VDDDVREKQ TDLGGGNRSTVVEDVPDI ESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS
Sbjct: 61  VDDDVREKQMTDLGGGNRSTVVEDVPDIGESSTNGAPEKSDVYNFLYPSKDLLPDDKEMS 120

Query: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180
           VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT
Sbjct: 121 VFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTT 180

Query: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLXXXXXXXXXXXXSYIVLTP 240
           LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLXXXXXXXXXXXXSYIVLTP
Sbjct: 181 LKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLXXXXXXXXXXXXSYIVLTP 240

Query: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300
           AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS
Sbjct: 241 AALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLS 300

Query: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 IWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348

[Close]

BLAST of Carg01865 vs. NCBI nr
Match: XP_022982565.1 (sec-independent protein translocase protein TATC, chloroplastic [Cucurbita maxima])

HSP 1 Score: 578.9 bits (1491), Expect = 1.1e-161
Identity = 338/347 (97.41%), Postives = 339/347 (97.69%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSAXXXXXXXXXXXXXXXXXRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGALTSHLQLSHCRF  XXXXXXXXXXXXXXXXX      S+LLSRRNFNRFVCSA
Sbjct: 1   MGSISGALTSHLQLSHCRFXXXXXXXXXXXXXXXXXXXXXXXXXSNLLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLXXXXXXXXXXXXSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLXXXXXXXXXXXXSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLXXXXXXXXXXXXSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

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BLAST of Carg01865 vs. NCBI nr
Match: XP_008446660.1 (PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucumis melo])

HSP 1 Score: 569.7 bits (1467), Expect = 6.8e-159
Identity = 297/347 (85.59%), Postives = 312/347 (89.91%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSAXXXXXXXXXXXXXXXXXRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISG+L+SHLQLSHCRFSA                 R+KLR +  LSRRNFNRFVCSA
Sbjct: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQT+LGGGN STVVEDVPDIA++STNGAP+KSD+YNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSK+L+L+LEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLXXXXXXXXXXXXSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVL            SYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Carg01865 vs. NCBI nr
Match: XP_004135073.1 (PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucumis sativus] >KGN52124.1 hypothetical protein Csa_5G611060 [Cucumis sativus])

HSP 1 Score: 567.8 bits (1462), Expect = 2.6e-158
Identity = 297/347 (85.59%), Postives = 312/347 (89.91%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSAXXXXXXXXXXXXXXXXXRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGAL+SHLQLS CRFSA                 R+KLRF+ LL RRNFNRFVCSA
Sbjct: 1   MGSISGALSSHLQLSDCRFSARTSQSQLTSVRISPTLRRTKLRFTGLLRRRNFNRFVCSA 60

Query: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQT+LGGGN STVVEDVPDIA++STNGAP+KSD+YNFLYPSKDLLPDD+EMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDREMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSK+L+L+LEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLXXXXXXXXXXXXSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVL            SY+VLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYVVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

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BLAST of Carg01865 vs. TAIR10
Match: AT2G01110.1 (Sec-independent periplasmic protein translocase)

HSP 1 Score: 417.2 bits (1071), Expect = 1.0e-116
Identity = 233/345 (67.54%), Postives = 261/345 (75.65%), Query Frame = 0


Query: 3   SISGALTSHLQLSHCRFSAXXXXXXXXXXXXXXXXXRSKLRFSSLLSRRNFNRFVCSAVD 62
           S S AL  H +L+     +                  + LR+ S+  RR+      SA++
Sbjct: 5   STSSALIHHFRLTTRNLGSPTKQRCPYAVTFCNSWREAGLRY-SVTQRRSKGFGPVSALN 64

Query: 63  DDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSVFD 122
           DD    +T  G G  S V +  PD +E         S VY FLYP K+ LPDDKEM++FD
Sbjct: 65  DDDSPTETTPGVG--SAVEDRPPDSSED------RSSSVYEFLYPRKEELPDDKEMTIFD 124

Query: 123 HLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTLKV 182
           HLEELR+RIFVSVLAVGAAILGCFAFSK+L++ LEAPVK QGVRFLQL PGEFFFTTLKV
Sbjct: 125 HLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLKV 184

Query: 183 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLXXXXXXXXXXXXSYIVLTPAAL 242
           SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIV             SY VLTPAAL
Sbjct: 185 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAAL 244

Query: 243 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWR 302
           NFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQ+G+VSGDQMLSIWR
Sbjct: 245 NFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIWR 304

Query: 303 YVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           YVVVGAVVAAAV+TPSTDP+TQ+LLA PLLGLYLGGAW+VKL+GR
Sbjct: 305 YVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340

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BLAST of Carg01865 vs. Swiss-Prot
Match: sp|Q94G17|TATC_PEA (Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum OX=3888 GN=TATC PE=1 SV=1)

HSP 1 Score: 432.2 bits (1110), Expect = 5.5e-120
Identity = 225/315 (71.43%), Postives = 260/315 (82.54%), Query Frame = 0


Query: 46  SLLSRRNFNRFVCSAVDDDVREKQ--------TDLGGG-----NRSTVVEDVPDIAESST 105
           SL   ++F+R VC AVDD++REKQ        T LG           +++ + + A  + 
Sbjct: 39  SLRKNKSFDRLVCFAVDDEIREKQQQQLSTSSTRLGSAVEERPENKDMIDGISEEALENF 98

Query: 106 NGAPEKSDVYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKEL 165
               E+S +Y+FLYPSK+LLPDDKEMS+FDHLEELR+RIF+SVL VG +ILGCFAFSK+L
Sbjct: 99  KEDGERSAIYDFLYPSKELLPDDKEMSIFDHLEELRERIFISVLGVGGSILGCFAFSKDL 158

Query: 166 VLILEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAER 225
           V ILEAPVK +GVRFLQL PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAF++PGLT+ ER
Sbjct: 159 VKILEAPVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFIIPGLTKEER 218

Query: 226 RFLGPIVLXXXXXXXXXXXXSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFS 285
           +FLGPIVL            SY+VL PAALNFFV+YAEGAVESLWSIDQYFEFVLVLMFS
Sbjct: 219 KFLGPIVLGSSVLFYAGITFSYLVLVPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFS 278

Query: 286 TGLSFQVPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLL 345
           TGLSFQVP+IQ+LLGQLGLVSGD+MLS+WRYVVVGAVVAAAV+TPSTDPLTQVLLAAPLL
Sbjct: 279 TGLSFQVPIIQLLLGQLGLVSGDKMLSVWRYVVVGAVVAAAVVTPSTDPLTQVLLAAPLL 338

Query: 346 GLYLGGAWVVKLSGR 348
           GLYLGGAW+VKL+GR
Sbjct: 339 GLYLGGAWMVKLAGR 353

[Close]

BLAST of Carg01865 vs. Swiss-Prot
Match: sp|Q9SJV5|TATC_ARATH (Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TATC PE=1 SV=2)

HSP 1 Score: 417.2 bits (1071), Expect = 1.8e-115
Identity = 233/345 (67.54%), Postives = 261/345 (75.65%), Query Frame = 0


Query: 3   SISGALTSHLQLSHCRFSAXXXXXXXXXXXXXXXXXRSKLRFSSLLSRRNFNRFVCSAVD 62
           S S AL  H +L+     +                  + LR+ S+  RR+      SA++
Sbjct: 5   STSSALIHHFRLTTRNLGSPTKQRCPYAVTFCNSWREAGLRY-SVTQRRSKGFGPVSALN 64

Query: 63  DDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSVFD 122
           DD    +T  G G  S V +  PD +E         S VY FLYP K+ LPDDKEM++FD
Sbjct: 65  DDDSPTETTPGVG--SAVEDRPPDSSED------RSSSVYEFLYPRKEELPDDKEMTIFD 124

Query: 123 HLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTLKV 182
           HLEELR+RIFVSVLAVGAAILGCFAFSK+L++ LEAPVK QGVRFLQL PGEFFFTTLKV
Sbjct: 125 HLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLKV 184

Query: 183 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLXXXXXXXXXXXXSYIVLTPAAL 242
           SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIV             SY VLTPAAL
Sbjct: 185 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAAL 244

Query: 243 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSIWR 302
           NFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQ+G+VSGDQMLSIWR
Sbjct: 245 NFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIWR 304

Query: 303 YVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           YVVVGAVVAAAV+TPSTDP+TQ+LLA PLLGLYLGGAW+VKL+GR
Sbjct: 305 YVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340

[Close]

BLAST of Carg01865 vs. Swiss-Prot
Match: sp|C4IZX0|TATC_MAIZE (Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays OX=4577 GN=TATC PE=2 SV=1)

HSP 1 Score: 415.2 bits (1066), Expect = 7.0e-115
Identity = 226/309 (73.14%), Postives = 250/309 (80.91%), Query Frame = 0


Query: 50  RRNFNRFVCSAVDDD--VREK----QTDLGGGNRSTVVEDVP--DIAESSTNGAP---EK 109
           RR      C+AVD D  +RE     Q +         +ED P     E+ + G P   E+
Sbjct: 48  RRRRQCLRCAAVDGDGALRESGPLPQKESPSSGIGAALEDPPPGPPVENGSFGGPSQEEQ 107

Query: 110 SDVYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEA 169
           S +Y FLYPSKDLLPDDKEMS+FDHLEELR RIF+SVLAVGAAILGCFAFSK+LV+ LEA
Sbjct: 108 SALYTFLYPSKDLLPDDKEMSIFDHLEELRDRIFISVLAVGAAILGCFAFSKDLVIFLEA 167

Query: 170 PVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPI 229
           PV  QGVRFLQL PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAFV+PGLTR ER+FLGPI
Sbjct: 168 PVTAQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVIPGLTRDERKFLGPI 227

Query: 230 VLXXXXXXXXXXXXSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQ 289
           VL            SY VL+PAALNFFV+YA+GAVESLWSIDQYFEF+LVLMFSTGLSFQ
Sbjct: 228 VLGSSVLFYLGIFFSYTVLSPAALNFFVNYADGAVESLWSIDQYFEFILVLMFSTGLSFQ 287

Query: 290 VPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGG 348
           VPVIQ+LLGQLGLVS DQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLA PLLGLYLGG
Sbjct: 288 VPVIQLLLGQLGLVSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGLYLGG 347

[Close]

BLAST of Carg01865 vs. Swiss-Prot
Match: sp|Q9AVE6|TATC_ORYSJ (Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=TATC PE=2 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 2.3e-113
Identity = 226/315 (71.75%), Postives = 252/315 (80.00%), Query Frame = 0


Query: 48  LSRRNFNRFVCSAVDDDV-RE---------KQTDLGGGNRSTVVED-VPDIAESSTNGA- 107
           LS R+     C+AVD    RE         ++ +   G+    +ED  P   ++ + G  
Sbjct: 45  LSCRHGRHLRCAAVDGGAGRETERPSPPAPQREESPSGSLGAALEDPSPQPVQNGSFGGI 104

Query: 108 ---PEKSDVYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKEL 167
               E+S +YNFLYPSK+LLPDDKEMS+FDHLEELR RIFVSVLAVGAAILGCFA+SK+L
Sbjct: 105 TEDEEQSSLYNFLYPSKELLPDDKEMSIFDHLEELRDRIFVSVLAVGAAILGCFAYSKDL 164

Query: 168 VLILEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAER 227
           + ILEAPV  QGVRFLQL PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER
Sbjct: 165 IRILEAPVSVQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRDER 224

Query: 228 RFLGPIVLXXXXXXXXXXXXSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFS 287
           +FLGPIVL            SY VL PAALNFFV+YA+GAVESLWSIDQYFEFVLVL+FS
Sbjct: 225 KFLGPIVLGSSVLFYLGIFFSYTVLAPAALNFFVNYADGAVESLWSIDQYFEFVLVLLFS 284

Query: 288 TGLSFQVPVIQILLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLL 347
           TGLSFQVPVIQ+LLGQ+GLVS DQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLA PLL
Sbjct: 285 TGLSFQVPVIQLLLGQVGLVSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLL 344

[Close]

BLAST of Carg01865 vs. Swiss-Prot
Match: sp|P54086|TATC_SYNY3 (Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=tatC PE=3 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 2.1e-71
Identity = 142/238 (59.66%), Postives = 176/238 (73.95%), Query Frame = 0


Query: 110 DLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQ 169
           D +PDD EMS+FDHL+ELR RIF+S+ AV   ++ CF F K LV  L+ P     V+FLQ
Sbjct: 19  DEVPDDVEMSLFDHLDELRTRIFLSLGAVLVGVVACFIFVKPLVQWLQVPAGT--VKFLQ 78

Query: 170 LGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLXXXXXXXXX 229
           L PGEFFF ++KV+GY G+L+ SP ILY+II FVLPGLTR ERR LGP+VL         
Sbjct: 79  LSPGEFFFVSVKVAGYSGILVMSPFILYQIIQFVLPGLTRRERRLLGPVVLGSSVLFFAG 138

Query: 230 XXXSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQL 289
              +Y  L PAAL FFVSY    VE LWSID+YFEFVL+LMFSTGL+FQ+P+IQ++LG L
Sbjct: 139 LGFAYYALIPAALKFFVSYGADVVEQLWSIDKYFEFVLLLMFSTGLAFQIPIIQVVLGFL 198

Query: 290 GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           G+VS +QML  WR+V++GA+V  A+LTPSTDPLTQ LLA  +LGLY GG   V+L G+
Sbjct: 199 GIVSSEQMLKGWRFVILGAMVLGAILTPSTDPLTQSLLAGAVLGLYFGGIGCVRLLGK 254

[Close]

BLAST of Carg01865 vs. TrEMBL
Match: tr|A0A1S3BG97|A0A1S3BG97_CUCME (sec-independent protein translocase protein TATC, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489323 PE=3 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 4.5e-159
Identity = 297/347 (85.59%), Postives = 312/347 (89.91%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSAXXXXXXXXXXXXXXXXXRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISG+L+SHLQLSHCRFSA                 R+KLR +  LSRRNFNRFVCSA
Sbjct: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQT+LGGGN STVVEDVPDIA++STNGAP+KSD+YNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSK+L+L+LEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLXXXXXXXXXXXXSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVL            SYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Carg01865 vs. TrEMBL
Match: tr|A0A0A0KTA2|A0A0A0KTA2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611060 PE=3 SV=1)

HSP 1 Score: 567.8 bits (1462), Expect = 1.7e-158
Identity = 297/347 (85.59%), Postives = 312/347 (89.91%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSAXXXXXXXXXXXXXXXXXRSKLRFSSLLSRRNFNRFVCSA 60
           MGSISGAL+SHLQLS CRFSA                 R+KLRF+ LL RRNFNRFVCSA
Sbjct: 1   MGSISGALSSHLQLSDCRFSARTSQSQLTSVRISPTLRRTKLRFTGLLRRRNFNRFVCSA 60

Query: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESSTNGAPEKSDVYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQT+LGGGN STVVEDVPDIA++STNGAP+KSD+YNFLYPSKDLLPDD+EMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDREMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSK+L+L+LEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLXXXXXXXXXXXXSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVL            SY+VLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYVVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of Carg01865 vs. TrEMBL
Match: tr|A0A0B0PM57|A0A0B0PM57_GOSAR (Sec-independent translocase protein TatC OS=Gossypium arboreum OX=29729 GN=F383_13666 PE=3 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 1.3e-126
Identity = 259/358 (72.35%), Postives = 278/358 (77.65%), Query Frame = 0


Query: 1   MGS--ISGALTSHLQLSHCRFS--AXXXXXXXXXXXXXXXXXRSKLRFSSLLSRRNFNRF 60
           MGS   S AL SHLQL+ C F                     R KL F++    + F   
Sbjct: 1   MGSANTSAALISHLQLNRCCFKLVESTRTQLEFNSLKFRLSRRGKLEFAASRRGKGFRTA 60

Query: 61  VC-SAVDDDVREKQTDLGGGNRS-TVVEDVPDIAESSTNGAP-----EKSDVYNFLYPSK 120
           VC +AVDDDV+E +  +    RS +  ED PD+A  S   AP     E S +YNFLYP K
Sbjct: 61  VCFAAVDDDVKENRQQVFSETRSASATEDRPDVANISPEEAPFEQNNEGSSLYNFLYPDK 120

Query: 121 DLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQ 180
           DLLPDDKEM++FDHLEELRQRIFVSVLAVGAAILGCFAFSKEL++ LEAPVK QGVRFLQ
Sbjct: 121 DLLPDDKEMTIFDHLEELRQRIFVSVLAVGAAILGCFAFSKELIVFLEAPVKAQGVRFLQ 180

Query: 181 LGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLXXXXXXXXX 240
           L PGEFFFTTLKVSGYCGLLLGSPVILYEII+FVLPGLTRAERRFLGPIVL         
Sbjct: 181 LAPGEFFFTTLKVSGYCGLLLGSPVILYEIISFVLPGLTRAERRFLGPIVLGSSVLFYAG 240

Query: 241 XXXSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQL 300
              SY+VLTPAALNFFVSYAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ LLGQL
Sbjct: 241 IAFSYLVLTPAALNFFVSYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQL 300

Query: 301 GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKL+GR
Sbjct: 301 GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAAPLLGLYLGGAWVVKLTGR 358

[Close]

BLAST of Carg01865 vs. TrEMBL
Match: tr|A0A218W749|A0A218W749_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr017609 PE=3 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 1.7e-126
Identity = 250/354 (70.62%), Postives = 280/354 (79.10%), Query Frame = 0


Query: 1   MGSISGALTSHLQLSHCRFSAXXXXXXXXXXXXXXXXXRSKLRFSSLLSRRNFNRFVCSA 60
           MGS S AL  HLQL+ C F+                  R +     L+S +  + F CSA
Sbjct: 1   MGSTSAALVPHLQLNGCCFNRLDSVKTQVTSFRIDWSRRRRTEL-RLMSSKRLSSFACSA 60

Query: 61  VDDDVREKQTDLGGGNRSTVVEDVPDIAESST-------NGAPEKSDVYNFLYPSKDLLP 120
           V+DD ++++   G G   + VED PD  +SS        +   EK+ +Y+FLYP+K+LLP
Sbjct: 61  VEDD-KQQELRSGDGGLGSAVEDRPDTTDSSREENLGTFSQDDEKNALYDFLYPNKELLP 120

Query: 121 DDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPG 180
           DDKEMS+FDHLEELRQRIFVSVL+VGAA+LGCFAFSKEL+++LEAPVK QGVRFLQL PG
Sbjct: 121 DDKEMSIFDHLEELRQRIFVSVLSVGAAMLGCFAFSKELIMVLEAPVKAQGVRFLQLAPG 180

Query: 181 EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLXXXXXXXXXXXXS 240
           EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTR+ERRFLGPIVL            S
Sbjct: 181 EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRSERRFLGPIVLGSSVLFYAGIVFS 240

Query: 241 YIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVS 300
           Y+VLTPAALNFFVSYAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQ+GLVS
Sbjct: 241 YLVLTPAALNFFVSYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQVGLVS 300

Query: 301 GDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           GDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKL+GR
Sbjct: 301 GDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLTGR 352

[Close]

BLAST of Carg01865 vs. TrEMBL
Match: tr|A0A2P5SH67|A0A2P5SH67_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD04570 PE=3 SV=1)

HSP 1 Score: 460.7 bits (1184), Expect = 2.9e-126
Identity = 255/354 (72.03%), Postives = 275/354 (77.68%), Query Frame = 0


Query: 3   SISGALTSHLQLSHCRFS--AXXXXXXXXXXXXXXXXXRSKLRFSSLLSRRNFNRFVC-S 62
           S S AL SHLQL+ C F                     R KL F++    + F   VC +
Sbjct: 5   STSAALISHLQLNRCCFKLVESTRTQLEFNSLKFRHSRRGKLEFAASRRGKGFRTAVCFA 64

Query: 63  AVDDDVREKQTDLGGGNRS-TVVEDVPDIAESSTNGAP-----EKSDVYNFLYPSKDLLP 122
           AVDDDV+E +  +    RS +  ED PD+   S   AP     E S +YNFLYP KDLLP
Sbjct: 65  AVDDDVKENRQQVFSETRSASATEDRPDVVNISPEEAPFEQNNEGSSLYNFLYPDKDLLP 124

Query: 123 DDKEMSVFDHLEELRQRIFVSVLAVGAAILGCFAFSKELVLILEAPVKEQGVRFLQLGPG 182
           DDKEM++FDHLEELRQRIFVSVLAVGAAILGCFAFSKEL++ LEAPVK QGVRFLQL PG
Sbjct: 125 DDKEMTIFDHLEELRQRIFVSVLAVGAAILGCFAFSKELIVFLEAPVKAQGVRFLQLAPG 184

Query: 183 EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLXXXXXXXXXXXXS 242
           EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVL            S
Sbjct: 185 EFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIAFS 244

Query: 243 YIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVS 302
           Y+VLTPAALNFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ LLGQLGLVS
Sbjct: 245 YLVLTPAALNFFVTYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQLGLVS 304

Query: 303 GDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           GDQMLSIWRYVVVGAV+AAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKL+GR
Sbjct: 305 GDQMLSIWRYVVVGAVIAAAVLTPSTDPLTQMLLAAPLLGLYLGGAWVVKLTGR 358

The following BLAST results are available for this feature:

BLAST of Carg01865 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022956650.1	3.0e-167	100.00	sec-independent protein translocase protein TATC, chloroplastic [Cucurbita mosch...	[more]
XP_023539458.1	2.2e-165	99.43	sec-independent protein translocase protein TATC, chloroplastic [Cucurbita pepo ...	[more]
XP_022982565.1	1.1e-161	97.41	sec-independent protein translocase protein TATC, chloroplastic [Cucurbita maxim...	[more]
XP_008446660.1	6.8e-159	85.59	PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucu...	[more]
XP_004135073.1	2.6e-158	85.59	PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucu...	[more]

BLAST of Carg01865 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01110.1	1.0e-116	67.54	Sec-independent periplasmic protein translocase	[more]

BLAST of Carg01865 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94G17\|TATC_PEA	5.5e-120	71.43	Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum...	[more]
sp\|Q9SJV5\|TATC_ARATH	1.8e-115	67.54	Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis t...	[more]
sp\|C4IZX0\|TATC_MAIZE	7.0e-115	73.14	Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays OX=4...	[more]
sp\|Q9AVE6\|TATC_ORYSJ	2.3e-113	71.75	Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa ...	[more]
sp\|P54086\|TATC_SYNY3	2.1e-71	59.66	Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PC...	[more]

BLAST of Carg01865 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BG97\|A0A1S3BG97_CUCME	4.5e-159	85.59	sec-independent protein translocase protein TATC, chloroplastic OS=Cucumis melo ...	[more]
tr\|A0A0A0KTA2\|A0A0A0KTA2_CUCSA	1.7e-158	85.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G611060 PE=3 SV=1	[more]
tr\|A0A0B0PM57\|A0A0B0PM57_GOSAR	1.3e-126	72.35	Sec-independent translocase protein TatC OS=Gossypium arboreum OX=29729 GN=F383_...	[more]
tr\|A0A218W749\|A0A218W749_PUNGR	1.7e-126	70.62	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr017609 PE=3 SV=1	[more]
tr\|A0A2P5SH67\|A0A2P5SH67_GOSBA	2.9e-126	72.03	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD04570 PE=3 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR019820	Sec-indep_translocase_CS
IPR002033	TatC

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01865-RA	Carg01865-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002033	Sec-independent periplasmic protein translocase TatC	PRINTS	PR01840	TATCFAMILY	coord: 211..237 score: 44.65 coord: 119..146 score: 39.08 coord: 262..290 score: 45.61 coord: 193..211 score: 54.92
IPR002033	Sec-independent periplasmic protein translocase TatC	TIGRFAM	TIGR00945	TIGR00945	coord: 121..335 e-value: 1.3E-80 score: 268.3
IPR002033	Sec-independent periplasmic protein translocase TatC	PFAM	PF00902	TatC	coord: 122..330 e-value: 4.4E-61 score: 206.2
IPR002033	Sec-independent periplasmic protein translocase TatC	PANTHER	PTHR30371	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC	coord: 78..347
IPR002033	Sec-independent periplasmic protein translocase TatC	HAMAP	MF_00902	TatC	coord: 115..347 score: 15.033
None	No IPR available	PANTHER	PTHR30371:SF3	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC, CHLOROPLASTIC	coord: 78..347
IPR019820	Sec-independent periplasmic protein translocase, conserved site	PROSITE	PS01218	TATC	coord: 262..281

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01865	Cla020433	Watermelon (97103) v1	carwmB0842
Carg01865	Csa5G611060	Cucumber (Chinese Long) v2	carcuB0857
Carg01865	MELO3C012288	Melon (DHL92) v3.5.1	carmeB0834
Carg01865	ClCG05G022340	Watermelon (Charleston Gray)	carwcgB0816
Carg01865	CSPI05G25690	Wild cucumber (PI 183967)	carcpiB0877
Carg01865	CmaCh04G014780	Cucurbita maxima (Rimu)	carcmaB1170
Carg01865	CmoCh04G015490	Cucurbita moschata (Rifu)	carcmoB1138
Carg01865	Lsi04G002100	Bottle gourd (USVL1VR-Ls)	carlsiB767
Carg01865	Cp4.1LG01g13950	Cucurbita pepo (Zucchini)	carcpeB1177
Carg01865	CsGy5G025120	Cucumber (Gy14) v2	carcgybB0831
Carg01865	MELO3C012288.2	Melon (DHL92) v3.6.1	carmedB0846
Carg01865	CsaV3_5G034760	Cucumber (Chinese Long) v3	carcucB0881
Carg01865	Cla97C05G104130	Watermelon (97103) v2	carwmbB0878
Carg01865	Bhi07G001055	Wax gourd	carwgoB0983

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg01865	Silver-seed gourd	carcarB617
Carg01865	Silver-seed gourd	carcarB629
Carg01865	Cucumber (Gy14) v2	carcgybB0836
Carg01865	Cucumber (Gy14) v1	carcgyB0965
Carg01865	Cucumber (Gy14) v1	carcgyB0968
Carg01865	Cucurbita maxima (Rimu)	carcmaB1161
Carg01865	Cucurbita maxima (Rimu)	carcmaB1167
Carg01865	Cucurbita maxima (Rimu)	carcmaB1169
Carg01865	Cucurbita moschata (Rifu)	carcmoB1130
Carg01865	Cucurbita moschata (Rifu)	carcmoB1135
Carg01865	Cucurbita moschata (Rifu)	carcmoB1137
Carg01865	Cucurbita pepo (Zucchini)	carcpeB1169
Carg01865	Cucurbita pepo (Zucchini)	carcpeB1175
Carg01865	Wild cucumber (PI 183967)	carcpiB0883
Carg01865	Cucumber (Chinese Long) v2	carcuB0863
Carg01865	Cucumber (Chinese Long) v3	carcucB0887
Carg01865	Bottle gourd (USVL1VR-Ls)	carlsiB763
Carg01865	Bottle gourd (USVL1VR-Ls)	carlsiB769
Carg01865	Melon (DHL92) v3.5.1	carmeB0830
Carg01865	Melon (DHL92) v3.6.1	carmedB0842
Carg01865	Watermelon (Charleston Gray)	carwcgB0811
Carg01865	Watermelon (97103) v1	carwmB0843
Carg01865	Watermelon (97103) v2	carwmbB0870
Carg01865	Wax gourd	carwgoB0975
Carg01865	Wax gourd	carwgoB0979