MELO3C012288 (gene) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MELO3C012288
Type	gene
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Sec-independent translocase protein TatC
Location	chr10 : 1452961 .. 1456107 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GACTAAGGTCCAGTAAAATAGATGACTCAGATTTTACAAAGTCCTGATTTTTCGGCATAACGCGAAAAGCTGCCATCGATTTTGGATTCAGAAGGTTGAAGAAGAGATGGGAAGCATTAGCGGTTCTCTATCATCGCATTTGCAGCTCAGTCATTGCCGTTTCTCTGCTAGAACCTCTCAGTCTCAGCTTACTTCAGTTCGAATTAGCCCAACGTTGAGAAGGACAAAGTTGCGACTCACCGGTTTTCTGAGCCGTAGAAATTTCAACAGATTCGTGTGTTCTGCTGTCGATGACGATGTAAGAGAGAAGCAGACGGAGTTGGGTGGTGGAAATGGCTCCACCGTCGTTGAGGATGTGCCAGGTACTAGTATTGCCAAAACTGATGACTCGTTTGAAAATCGTGAATTTTTGGAAGTAGTGATCTGATGAAATAGTATTGGTCCTTAATTTTGTCTAGAATTTGATGTAGAAATTACTTACGTTCAATGGAGATGTTTGTTCCGGTTGGATTTTTAGATGAGCTTATGTGGGTTCTGGTTCGAAGGGAGAAGTTCATAAGTTGATTTATTTGGACCCAGGGGAGGAAATATCTAGCTCAAGTTGTTACATCCGAAGTTCTGGATGAAACTTGTTGGAATCCTACACGCTTACTTCACTTGTATCTAAATGTTTATTGCATATCTTGATTTCTACCTATTAAATTATGTGGCTGCAGAATTTTATGCTATAATTGGTATGAATGTTATTAATACTCCATCCTTTTTCATGGAAAAAATATTAGATATTGCCAAGAATTCAACAAACGGCGCTCCGGATAAAAGTGATATTTATAACTTTCTCTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTTTCAGTTTTGGCTGTTGGAGCTGCAATTATTGGATGCTTTGCATTTTCGAAAGATCTCATCTTACTTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTAAAGGTCAGAACTTCGTATGATGAAATCTAATTCCATTATAATAACTTTTTGTGGACCTGTGAATGGTTACCAGCCATTTGGATAGCTACTGACACGAAAATGGCCAATGATACAACAAATCTTGAAAAATGAGAAGAACATGTTTGACTTTAACCAACTTGACTTTAACTTGGGTCAACGGTGATTTAACATGAAGTTGCAGTAAGAGTTGCTAACTTGAAATCTTTGCAACACCATCTCTTATTCATCAACCTCTAACCATTAAACACAAGAAAAATTTGTCTAAATGATGAGAACAAAGAAAAGCTCACTGTAATATGTTATTTGAATTAAAAACTCTTTGCTTATTCAATCAATCTTCCTGGTGTGTGTGTGTGTTGAGTAATACCAAATCACTAGATTCTATAAGACTTACGTCCCTCTCTAAGTCGATGGGTGATACCACAACTTTGAACTATGCCGTCGGGAAATGTTTGTTTCTGATTTTTGTTCAATTCAAAACTGCATTTTACACTCAATACTGCAGCTGTATATTTTTCATATTGGTGGGTGTCAATAACAATAAAATTCTCCTTATGCGTTCCAGGTATCAGGATACTGTGGCCTTCTCCTTGGAAGTCCTGTCATCCTCTATGAGATTATTGCATTTGTTCTTCCAGGATTGACAAGAACAGAACGACAATTTCTGGCACCTATCGTCCTAGGCTCTTCTATACTTTTCTATGCAGGAATTGCCTTCTCCTACATAGTGTTGACGCCAGCAGCCCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTCGAATCCTTGTGGTCCATTGATCAATACTTCGAATTTGTACTTGTTCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTAAAAGTTGTGTTTTTATAATGAATTAACAATCACATCTTTTAGAATGTTGGCCATGCACTAGAAGCTTACTTTTTAGGAACAATCTCAAATCATCACCCAATGGAGCTAAGCATTTTGACAATATAAATTTCATTTTCTTTTCCAGGTTCCAGTAATACAGGTTCTACTTGGACAACTTGGACTCGTCTCAGGAGACCAAATGCTATCAATTTGGAGATATGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTACTCACACCATCAACGGATCCCCTAACTCAGGTACTTCTGGCAGCTCCCCTGCTGGGCCTTTACTTGGGAGGTGCTTGGGTGGTCAAGCTCTCAGGGAGATAGATCCAAATTCAACCCTAATTTTTCAGCCCTTCGAGGATTCTGTACATTCACAAAACTCCTTGATGTAGTGTAATTGTAACACCAATTTATAGAAAGGAATATTTGTTCCATGGATGAAATTTTTTTTTTTTATGAAGCAATAATAGATAGTCTGGTTTCTTTCATGACAAGAACTAAAGCTATAGTAACAAAACTTGGTTGTAAACTCGTCTACCCACGTACATCAACAGTGAGTTATGAGGCAAGAGATACATCAGATTGCATAGAGTATCTTTTAGTTGCTTAAAGTTACATTCTGCATTCTAGTCTCTAGATCAGGAGATGAGAAGCCACCTAGTTCAGTCTCGAGCTGCTTCAAGGAATCTCGAAGATTGTCGCACACCTGAAGAAAGCCTTCAGAATTACCATTAAGACTTTCCAACTCTGCCTGCATATTGTCAAGAAAGCTAAAGATTTTCTCAGAAGCTACTTTAATGGCAGGGCCCTCTTGTGGGGGGTAAAGACAAGCTCCAAGCTCGTCAACCTGCAGTCCAATTCCTTGGCATTGCTTTAATAGATTCTCCAGGGACGCCAAGTTACTTTCCTTGTTTGCATTTTCTAGTTTAAGCAAACTTGTGATAGAGCGAATGAGTTCCTTTATAACTAGAAGTATTGAAGATACAACATTAGTTGCAGATTGGGCGACTCTCATCTCTTCAGCTGACAAATCGTTACCTATATCAGCATCATCGCTTGTATTATCCTCATCTTGCAAATCGCCTTCGACTGCATTAGATAACTCTTCAGGAGCTTTGTCCAGGTCGGAGGAACCTTGTTTAAGCTCCTTCATTTCTCGAAGGACATCCT

mRNA sequence

GACTAAGGTCCAGTAAAATAGATGACTCAGATTTTACAAAGTCCTGATTTTTCGGCATAACGCGAAAAGCTGCCATCGATTTTGGATTCAGAAGGTTGAAGAAGAGATGGGAAGCATTAGCGGTTCTCTATCATCGCATTTGCAGCTCAGTCATTGCCGTTTCTCTGCTAGAACCTCTCAGTCTCAGCTTACTTCAGTTCGAATTAGCCCAACGTTGAGAAGGACAAAGTTGCGACTCACCGGTTTTCTGAGCCGTAGAAATTTCAACAGATTCGTGTGTTCTGCTGTCGATGACGATGTAAGAGAGAAGCAGACGGAGTTGGGTGGTGGAAATGGCTCCACCGTCGTTGAGGATGTGCCAGATATTGCCAAGAATTCAACAAACGGCGCTCCGGATAAAAGTGATATTTATAACTTTCTCTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTTTCAGTTTTGGCTGTTGGAGCTGCAATTATTGGATGCTTTGCATTTTCGAAAGATCTCATCTTACTTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTAAAGGTATCAGGATACTGTGGCCTTCTCCTTGGAAGTCCTGTCATCCTCTATGAGATTATTGCATTTGTTCTTCCAGGATTGACAAGAACAGAACGACAATTTCTGGCACCTATCGTCCTAGGCTCTTCTATACTTTTCTATGCAGGAATTGCCTTCTCCTACATAGTGTTGACGCCAGCAGCCCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTCGAATCCTTGTGGTCCATTGATCAATACTTCGAATTTGTACTTGTTCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTAATACAGGTTCTACTTGGACAACTTGGACTCGTCTCAGGAGACCAAATGCTATCAATTTGGAGATATGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTACTCACACCATCAACGGATCCCCTAACTCAGGTACTTCTGGCAGCTCCCCTGCTGGGCCTTTACTTGGGAGGTGCTTGGGTGGTCAAGCTCTCAGGGAGATAGATCCAAATTCAACCCTAATTTTTCAGCCCTTCGAGGATTCTGTACATTCACAAAACTCCTTGATGTAGTGTAATTGTAACACCAATTTATAGAAAGGAATATTTGTTCCATGGATGAAATTTTTTTTTTTTATGAAGCAATAATAGATAGTCTGGTTTCTTTCATGACAAGAACTAAAGCTATAGTAACAAAACTTGGTTGTAAACTCGTCTACCCACGTACATCAACAGTGAGTTATGAGGCAAGAGATACATCAGATTGCATAGAGTATCTTTTAGTTGCTTAAAGTTACATTCTGCATTCTAGTCTCTAGATCAGGAGATGAGAAGCCACCTAGTTCAGTCTCGAGCTGCTTCAAGGAATCTCGAAGATTGTCGCACACCTGAAGAAAGCCTTCAGAATTACCATTAAGACTTTCCAACTCTGCCTGCATATTGTCAAGAAAGCTAAAGATTTTCTCAGAAGCTACTTTAATGGCAGGGCCCTCTTGTGGGGGGTAAAGACAAGCTCCAAGCTCGTCAACCTGCAGTCCAATTCCTTGGCATTGCTTTAATAGATTCTCCAGGGACGCCAAGTTACTTTCCTTGTTTGCATTTTCTAGTTTAAGCAAACTTGTGATAGAGCGAATGAGTTCCTTTATAACTAGAAGTATTGAAGATACAACATTAGTTGCAGATTGGGCGACTCTCATCTCTTCAGCTGACAAATCGTTACCTATATCAGCATCATCGCTTGTATTATCCTCATCTTGCAAATCGCCTTCGACTGCATTAGATAACTCTTCAGGAGCTTTGTCCAGGTCGGAGGAACCTTGTTTAAGCTCCTTCATTTCTCGAAGGACATCCT

Coding sequence (CDS)

ATGGGAAGCATTAGCGGTTCTCTATCATCGCATTTGCAGCTCAGTCATTGCCGTTTCTCTGCTAGAACCTCTCAGTCTCAGCTTACTTCAGTTCGAATTAGCCCAACGTTGAGAAGGACAAAGTTGCGACTCACCGGTTTTCTGAGCCGTAGAAATTTCAACAGATTCGTGTGTTCTGCTGTCGATGACGATGTAAGAGAGAAGCAGACGGAGTTGGGTGGTGGAAATGGCTCCACCGTCGTTGAGGATGTGCCAGATATTGCCAAGAATTCAACAAACGGCGCTCCGGATAAAAGTGATATTTATAACTTTCTCTATCCCAGTAAAGATCTACTTCCAGATGATAAAGAAATGAGCGTGTTTGATCATCTTGAAGAACTACGTCAGAGGATATTTGTTTCAGTTTTGGCTGTTGGAGCTGCAATTATTGGATGCTTTGCATTTTCGAAAGATCTCATCTTACTTCTTGAAGCTCCAGTTAAGGAACAAGGTGTAAGGTTCCTGCAGCTTGGTCCTGGGGAGTTTTTCTTTACAACATTAAAGGTATCAGGATACTGTGGCCTTCTCCTTGGAAGTCCTGTCATCCTCTATGAGATTATTGCATTTGTTCTTCCAGGATTGACAAGAACAGAACGACAATTTCTGGCACCTATCGTCCTAGGCTCTTCTATACTTTTCTATGCAGGAATTGCCTTCTCCTACATAGTGTTGACGCCAGCAGCCCTAAATTTCTTTGTTAGTTATGCTGAAGGAGCTGTCGAATCCTTGTGGTCCATTGATCAATACTTCGAATTTGTACTTGTTCTTATGTTCAGTACAGGCTTGTCTTTCCAGGTTCCAGTAATACAGGTTCTACTTGGACAACTTGGACTCGTCTCAGGAGACCAAATGCTATCAATTTGGAGATATGTTGTTGTTGGTGCAGTGGTGGCAGCTGCTGTACTCACACCATCAACGGATCCCCTAACTCAGGTACTTCTGGCAGCTCCCCTGCTGGGCCTTTACTTGGGAGGTGCTTGGGTGGTCAAGCTCTCAGGGAGATAG

Protein sequence

MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSAVDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR*

Homology

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BLAST of MELO3C012288 vs. Swiss-Prot
Match: TATC_PEA (Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum GN=TATC PE=1 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 4.9e-129
Identity = 230/310 (74.19%), Postives = 266/310 (85.81%), Query Frame = 1


Query: 51  RNFNRFVCSAVDDDVREKQ--------TELGGG-----NGSTVVEDVPDIAKNSTNGAPD 110
           ++F+R VC AVDD++REKQ        T LG           +++ + + A  +     +
Sbjct: 44  KSFDRLVCFAVDDEIREKQQQQLSTSSTRLGSAVEERPENKDMIDGISEEALENFKEDGE 103

Query: 111 KSDIYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLE 170
           +S IY+FLYPSK+LLPDDKEMS+FDHLEELR+RIF+SVL VG +I+GCFAFSKDL+ +LE
Sbjct: 104 RSAIYDFLYPSKELLPDDKEMSIFDHLEELRERIFISVLGVGGSILGCFAFSKDLVKILE 163

Query: 171 APVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAP 230
           APVK +GVRFLQL PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAF++PGLT+ ER+FL P
Sbjct: 164 APVKSEGVRFLQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFIIPGLTKEERKFLGP 223

Query: 231 IVLGSSILFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSF 290
           IVLGSS+LFYAGI FSY+VL PAALNFFV+YAEGAVESLWSIDQYFEFVLVLMFSTGLSF
Sbjct: 224 IVLGSSVLFYAGITFSYLVLVPAALNFFVNYAEGAVESLWSIDQYFEFVLVLMFSTGLSF 283

Query: 291 QVPVIQVLLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLG 348
           QVP+IQ+LLGQLGLVSGD+MLS+WRYVVVGAVVAAAV+TPSTDPLTQVLLAAPLLGLYLG
Sbjct: 284 QVPIIQLLLGQLGLVSGDKMLSVWRYVVVGAVVAAAVVTPSTDPLTQVLLAAPLLGLYLG 343

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BLAST of MELO3C012288 vs. Swiss-Prot
Match: TATC_ARATH (Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis thaliana GN=TATC PE=1 SV=2)

HSP 1 Score: 453.4 bits (1165), Expect = 2.3e-126
Identity = 242/345 (70.14%), Postives = 275/345 (79.71%), Query Frame = 1


Query: 3   SISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSAVD 62
           S S +L  H +L+     + T Q    +V    + R   LR +    RR+      SA++
Sbjct: 5   STSSALIHHFRLTTRNLGSPTKQRCPYAVTFCNSWREAGLRYS-VTQRRSKGFGPVSALN 64

Query: 63  DDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSVFD 122
           DD  +  TE   G GS V +  PD +++ +      S +Y FLYP K+ LPDDKEM++FD
Sbjct: 65  DD--DSPTETTPGVGSAVEDRPPDSSEDRS------SSVYEFLYPRKEELPDDKEMTIFD 124

Query: 123 HLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTLKV 182
           HLEELR+RIFVSVLAVGAAI+GCFAFSKDLI+ LEAPVK QGVRFLQL PGEFFFTTLKV
Sbjct: 125 HLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLKV 184

Query: 183 SGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAAL 242
           SGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIV GSS+LFYAG+AFSY VLTPAAL
Sbjct: 185 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAAL 244

Query: 243 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSIWR 302
           NFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQ+G+VSGDQMLSIWR
Sbjct: 245 NFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIWR 304

Query: 303 YVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           YVVVGAVVAAAV+TPSTDP+TQ+LLA PLLGLYLGGAW+VKL+GR
Sbjct: 305 YVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340

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BLAST of MELO3C012288 vs. Swiss-Prot
Match: TATC_MAIZE (Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays GN=TATC PE=2 SV=1)

HSP 1 Score: 447.6 bits (1150), Expect = 1.3e-124
Identity = 238/330 (72.12%), Postives = 264/330 (80.00%), Query Frame = 1


Query: 35  PTLRRTKLRLTGFLS------RRNFNRFVCSAVDDD--VREK----QTELGGGNGSTVVE 94
           P LR+  L L    +      RR      C+AVD D  +RE     Q E         +E
Sbjct: 27  PLLRQRNLPLISLAAPALEPERRRRQCLRCAAVDGDGALRESGPLPQKESPSSGIGAALE 86

Query: 95  DVPD--IAKNSTNGAP---DKSDIYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLA 154
           D P     +N + G P   ++S +Y FLYPSKDLLPDDKEMS+FDHLEELR RIF+SVLA
Sbjct: 87  DPPPGPPVENGSFGGPSQEEQSALYTFLYPSKDLLPDDKEMSIFDHLEELRDRIFISVLA 146

Query: 155 VGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILY 214
           VGAAI+GCFAFSKDL++ LEAPV  QGVRFLQL PGEFFFTTLKVSGYCGLLLGSP+ILY
Sbjct: 147 VGAAILGCFAFSKDLVIFLEAPVTAQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSPIILY 206

Query: 215 EIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAALNFFVSYAEGAVESLW 274
           EIIAFV+PGLTR ER+FL PIVLGSS+LFY GI FSY VL+PAALNFFV+YA+GAVESLW
Sbjct: 207 EIIAFVIPGLTRDERKFLGPIVLGSSVLFYLGIFFSYTVLSPAALNFFVNYADGAVESLW 266

Query: 275 SIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTP 334
           SIDQYFEF+LVLMFSTGLSFQVPVIQ+LLGQLGLVS DQMLSIWRYVVVGAVVAAAVLTP
Sbjct: 267 SIDQYFEFILVLMFSTGLSFQVPVIQLLLGQLGLVSSDQMLSIWRYVVVGAVVAAAVLTP 326

Query: 335 STDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           STDPLTQ+LLA PLLGLYLGGAW+VK++GR
Sbjct: 327 STDPLTQMLLAGPLLGLYLGGAWMVKITGR 356

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BLAST of MELO3C012288 vs. Swiss-Prot
Match: TATC_ORYSJ (Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa subsp. japonica GN=TATC PE=2 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 1.4e-123
Identity = 231/315 (73.33%), Postives = 257/315 (81.59%), Query Frame = 1


Query: 48  LSRRNFNRFVCSAVDDDVR-----------EKQTELGGGNGSTVVEDVPDIAKNSTNGA- 107
           LS R+     C+AVD               +++    G  G+ + +  P   +N + G  
Sbjct: 45  LSCRHGRHLRCAAVDGGAGRETERPSPPAPQREESPSGSLGAALEDPSPQPVQNGSFGGI 104

Query: 108 ---PDKSDIYNFLYPSKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDL 167
               ++S +YNFLYPSK+LLPDDKEMS+FDHLEELR RIFVSVLAVGAAI+GCFA+SKDL
Sbjct: 105 TEDEEQSSLYNFLYPSKELLPDDKEMSIFDHLEELRDRIFVSVLAVGAAILGCFAYSKDL 164

Query: 168 ILLLEAPVKEQGVRFLQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTER 227
           I +LEAPV  QGVRFLQL PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER
Sbjct: 165 IRILEAPVSVQGVRFLQLSPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRDER 224

Query: 228 QFLAPIVLGSSILFYAGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFS 287
           +FL PIVLGSS+LFY GI FSY VL PAALNFFV+YA+GAVESLWSIDQYFEFVLVL+FS
Sbjct: 225 KFLGPIVLGSSVLFYLGIFFSYTVLAPAALNFFVNYADGAVESLWSIDQYFEFVLVLLFS 284

Query: 288 TGLSFQVPVIQVLLGQLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLL 347
           TGLSFQVPVIQ+LLGQ+GLVS DQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLA PLL
Sbjct: 285 TGLSFQVPVIQLLLGQVGLVSSDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLL 344

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BLAST of MELO3C012288 vs. Swiss-Prot
Match: TATC_SYNY3 (Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=tatC PE=3 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 3.2e-80
Identity = 148/238 (62.18%), Postives = 184/238 (77.31%), Query Frame = 1


Query: 110 DLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQ 169
           D +PDD EMS+FDHL+ELR RIF+S+ AV   ++ CF F K L+  L+ P     V+FLQ
Sbjct: 19  DEVPDDVEMSLFDHLDELRTRIFLSLGAVLVGVVACFIFVKPLVQWLQVPAGT--VKFLQ 78

Query: 170 LGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAG 229
           L PGEFFF ++KV+GY G+L+ SP ILY+II FVLPGLTR ER+ L P+VLGSS+LF+AG
Sbjct: 79  LSPGEFFFVSVKVAGYSGILVMSPFILYQIIQFVLPGLTRRERRLLGPVVLGSSVLFFAG 138

Query: 230 IAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQL 289
           + F+Y  L PAAL FFVSY    VE LWSID+YFEFVL+LMFSTGL+FQ+P+IQV+LG L
Sbjct: 139 LGFAYYALIPAALKFFVSYGADVVEQLWSIDKYFEFVLLLMFSTGLAFQIPIIQVVLGFL 198

Query: 290 GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           G+VS +QML  WR+V++GA+V  A+LTPSTDPLTQ LLA  +LGLY GG   V+L G+
Sbjct: 199 GIVSSEQMLKGWRFVILGAMVLGAILTPSTDPLTQSLLAGAVLGLYFGGIGCVRLLGK 254

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BLAST of MELO3C012288 vs. TrEMBL
Match: A0A0A0KTA2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611060 PE=3 SV=1)

HSP 1 Score: 662.1 bits (1707), Expect = 3.6e-187
Identity = 338/347 (97.41%), Postives = 343/347 (98.85%), Query Frame = 1


Query: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60
           MGSISG+LSSHLQLS CRFSARTSQSQLTSVRISPTLRRTKLR TG L RRNFNRFVCSA
Sbjct: 1   MGSISGALSSHLQLSDCRFSARTSQSQLTSVRISPTLRRTKLRFTGLLRRRNFNRFVCSA 60

Query: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDD+EMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDREMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSY+VLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYVVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

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BLAST of MELO3C012288 vs. TrEMBL
Match: A0A067KRT6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09288 PE=3 SV=1)

HSP 1 Score: 495.0 bits (1273), Expect = 7.6e-137
Identity = 266/360 (73.89%), Postives = 298/360 (82.78%), Query Frame = 1


Query: 1   MGSISGSLSSHLQLSHCRF----SARTSQSQLTSVRI-----SPTLRRTKLRLTGFLSRR 60
           MG+ + +L  HLQL  C +    S +  Q Q  S++      S +LRR +LR  G  + R
Sbjct: 1   MGTTATALIPHLQLHGCFYRCFDSIKNHQQQPASLQFNNNSSSSSLRRGRLRFDGSPNTR 60

Query: 61  NFNRFVC-SAVDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGA---PDKSDIYNFLYP 120
           +F++ VC +AVDDD+ EKQ  L     S+ +ED  D+  +S        + S IYNFLYP
Sbjct: 61  SFSKVVCFAAVDDDIGEKQ--LDSPTTSSALEDRADMLDSSQENFGQDTEGSAIYNFLYP 120

Query: 121 SKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRF 180
           SK+LLPDDKEMS+FDHLEELRQRIFVSVLAVG AI+GCFAFSK+LI+LLEAPVK QGVRF
Sbjct: 121 SKELLPDDKEMSIFDHLEELRQRIFVSVLAVGGAILGCFAFSKELIMLLEAPVKVQGVRF 180

Query: 181 LQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFY 240
           LQL PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAFVLPGLTR ER+FL PIVLGSS+LFY
Sbjct: 181 LQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFY 240

Query: 241 AGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLG 300
           AGIAFSY+VLTPAALNFFVSYAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ LLG
Sbjct: 241 AGIAFSYLVLTPAALNFFVSYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLG 300

Query: 301 QLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           Q+GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKL+GR
Sbjct: 301 QVGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAAPLLGLYLGGAWVVKLTGR 358

[Close]

BLAST of MELO3C012288 vs. TrEMBL
Match: A0A0B0PM57_GOSAR (Sec-independent translocase protein TatC OS=Gossypium arboreum GN=F383_13666 PE=3 SV=1)

HSP 1 Score: 491.9 bits (1265), Expect = 6.5e-136
Identity = 268/360 (74.44%), Postives = 294/360 (81.67%), Query Frame = 1


Query: 1   MGSI--SGSLSSHLQLSHCRF----SARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFN 60
           MGS   S +L SHLQL+ C F    S RT Q +  S++   + RR KL        + F 
Sbjct: 1   MGSANTSAALISHLQLNRCCFKLVESTRT-QLEFNSLKFRLS-RRGKLEFAASRRGKGFR 60

Query: 61  RFVC-SAVDDDVRE-KQTELGGGNGSTVVEDVPDIAKNSTNGAP-----DKSDIYNFLYP 120
             VC +AVDDDV+E +Q        ++  ED PD+A  S   AP     + S +YNFLYP
Sbjct: 61  TAVCFAAVDDDVKENRQQVFSETRSASATEDRPDVANISPEEAPFEQNNEGSSLYNFLYP 120

Query: 121 SKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRF 180
            KDLLPDDKEM++FDHLEELRQRIFVSVLAVGAAI+GCFAFSK+LI+ LEAPVK QGVRF
Sbjct: 121 DKDLLPDDKEMTIFDHLEELRQRIFVSVLAVGAAILGCFAFSKELIVFLEAPVKAQGVRF 180

Query: 181 LQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFY 240
           LQL PGEFFFTTLKVSGYCGLLLGSPVILYEII+FVLPGLTR ER+FL PIVLGSS+LFY
Sbjct: 181 LQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIISFVLPGLTRAERRFLGPIVLGSSVLFY 240

Query: 241 AGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLG 300
           AGIAFSY+VLTPAALNFFVSYAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ LLG
Sbjct: 241 AGIAFSYLVLTPAALNFFVSYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLG 300

Query: 301 QLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           QLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKL+GR
Sbjct: 301 QLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAAPLLGLYLGGAWVVKLTGR 358

[Close]

BLAST of MELO3C012288 vs. TrEMBL
Match: A0A0D2T199_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G158400 PE=3 SV=1)

HSP 1 Score: 490.7 bits (1262), Expect = 1.4e-135
Identity = 264/356 (74.16%), Postives = 291/356 (81.74%), Query Frame = 1


Query: 3   SISGSLSSHLQLSHCRF----SARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVC 62
           S S +L SHLQL+ C F    S RT Q +  S++   + RR KL        + F   VC
Sbjct: 5   STSAALISHLQLNRCCFKLVESTRT-QLEFNSLKFRHS-RRGKLEFAASRRGKGFRTAVC 64

Query: 63  -SAVDDDVRE-KQTELGGGNGSTVVEDVPDIAKNSTNGAP-----DKSDIYNFLYPSKDL 122
            +AVDDDV+E +Q        ++  ED PD+   S   AP     + S +YNFLYP KDL
Sbjct: 65  FAAVDDDVKENRQQVFSETRSASATEDRPDVVNISPEEAPFEQNNEGSSLYNFLYPDKDL 124

Query: 123 LPDDKEMSVFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLG 182
           LPDDKEM++FDHLEELRQRIFVSVLAVGAAI+GCFAFSK+LI+ LEAPVK QGVRFLQL 
Sbjct: 125 LPDDKEMTIFDHLEELRQRIFVSVLAVGAAILGCFAFSKELIVFLEAPVKVQGVRFLQLA 184

Query: 183 PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIA 242
           PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFYAGIA
Sbjct: 185 PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIA 244

Query: 243 FSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGL 302
           FSY+VLTPAALNFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ LLGQLGL
Sbjct: 245 FSYLVLTPAALNFFVTYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQLGL 304

Query: 303 VSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           VSGDQMLSIWRYVVVGAV+AAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKL+GR
Sbjct: 305 VSGDQMLSIWRYVVVGAVIAAAVLTPSTDPLTQMLLAAPLLGLYLGGAWVVKLTGR 358

[Close]

BLAST of MELO3C012288 vs. TrEMBL
Match: A0A0V0I342_SOLCH (Putative sec-independent protein translocase protein TATC, chloroplastic-like OS=Solanum chacoense PE=3 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 2.1e-134
Identity = 263/358 (73.46%), Postives = 300/358 (83.80%), Query Frame = 1


Query: 1   MGSISGSLSS-HLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCS 60
           MGS S  +S+ HL  +HC F    S+   TS+ I+PT  R KL L+     + F+R VCS
Sbjct: 1   MGSSSALISNLHLTQTHC-FKCLNSR---TSLNINPT--RPKLNLSSRKYIKKFSRLVCS 60

Query: 61  AVDDDVREKQTELGGGNGSTV---VEDVPDIAKNST-----NGAPDK--SDIYNFLYPSK 120
           AV+D + EKQ E+ G N S++   +ED PD+   S+     NG  D   S +Y+FLYP+K
Sbjct: 61  AVEDSI-EKQREISGANASSLGSALEDRPDVGDGSSESLFKNGESDSEGSVVYDFLYPNK 120

Query: 121 DLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQ 180
           +LLPDDKEM++FDHLEELRQR+FVSVLAVGAAI+GCFAFSK+LIL+LEAPV  QGVRFLQ
Sbjct: 121 ELLPDDKEMTLFDHLEELRQRLFVSVLAVGAAIVGCFAFSKELILILEAPVLAQGVRFLQ 180

Query: 181 LGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAG 240
           LGPGEFFFTTLKVSGY GLLLG+PVILYEIIAFVLPGLT +ER+FLAPIVLGSS+LFYAG
Sbjct: 181 LGPGEFFFTTLKVSGYSGLLLGAPVILYEIIAFVLPGLTMSERRFLAPIVLGSSVLFYAG 240

Query: 241 IAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQL 300
           I FS++VLTPAALNFFV+YAEGAVES WSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQ 
Sbjct: 241 IVFSHLVLTPAALNFFVNYAEGAVESFWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQT 300

Query: 301 GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLA PLLGLYLGGAW+VKLSGR
Sbjct: 301 GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAGPLLGLYLGGAWMVKLSGR 351

[Close]

BLAST of MELO3C012288 vs. TAIR10
Match: AT2G01110.1 (AT2G01110.1 Sec-independent periplasmic protein translocase)

HSP 1 Score: 453.4 bits (1165), Expect = 1.3e-127
Identity = 242/345 (70.14%), Postives = 275/345 (79.71%), Query Frame = 1


Query: 3   SISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSAVD 62
           S S +L  H +L+     + T Q    +V    + R   LR +    RR+      SA++
Sbjct: 5   STSSALIHHFRLTTRNLGSPTKQRCPYAVTFCNSWREAGLRYS-VTQRRSKGFGPVSALN 64

Query: 63  DDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSVFD 122
           DD  +  TE   G GS V +  PD +++ +      S +Y FLYP K+ LPDDKEM++FD
Sbjct: 65  DD--DSPTETTPGVGSAVEDRPPDSSEDRS------SSVYEFLYPRKEELPDDKEMTIFD 124

Query: 123 HLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTLKV 182
           HLEELR+RIFVSVLAVGAAI+GCFAFSKDLI+ LEAPVK QGVRFLQL PGEFFFTTLKV
Sbjct: 125 HLEELRERIFVSVLAVGAAILGCFAFSKDLIVFLEAPVKTQGVRFLQLAPGEFFFTTLKV 184

Query: 183 SGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPAAL 242
           SGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIV GSS+LFYAG+AFSY VLTPAAL
Sbjct: 185 SGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVFGSSLLFYAGLAFSYWVLTPAAL 244

Query: 243 NFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSIWR 302
           NFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQ+G+VSGDQMLSIWR
Sbjct: 245 NFFVNYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQLLLGQVGVVSGDQMLSIWR 304

Query: 303 YVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           YVVVGAVVAAAV+TPSTDP+TQ+LLA PLLGLYLGGAW+VKL+GR
Sbjct: 305 YVVVGAVVAAAVVTPSTDPVTQMLLATPLLGLYLGGAWMVKLTGR 340

[Close]

BLAST of MELO3C012288 vs. NCBI nr
Match: gi|659091655|ref|XP_008446660.1| (PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucumis melo])

HSP 1 Score: 674.9 bits (1740), Expect = 7.7e-191
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 1


Query: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60
           MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA
Sbjct: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60

Query: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of MELO3C012288 vs. NCBI nr
Match: gi|449434578|ref|XP_004135073.1| (PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucumis sativus])

HSP 1 Score: 662.1 bits (1707), Expect = 5.2e-187
Identity = 338/347 (97.41%), Postives = 343/347 (98.85%), Query Frame = 1


Query: 1   MGSISGSLSSHLQLSHCRFSARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVCSA 60
           MGSISG+LSSHLQLS CRFSARTSQSQLTSVRISPTLRRTKLR TG L RRNFNRFVCSA
Sbjct: 1   MGSISGALSSHLQLSDCRFSARTSQSQLTSVRISPTLRRTKLRFTGLLRRRNFNRFVCSA 60

Query: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDKEMSV 120
           VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDD+EMSV
Sbjct: 61  VDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGAPDKSDIYNFLYPSKDLLPDDREMSV 120

Query: 121 FDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180
           FDHLEELRQRIFVSVLAVGAAI+GCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL
Sbjct: 121 FDHLEELRQRIFVSVLAVGAAIVGCFAFSKDLILLLEAPVKEQGVRFLQLGPGEFFFTTL 180

Query: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYIVLTPA 240
           KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSY+VLTPA
Sbjct: 181 KVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIAFSYVVLTPA 240

Query: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGLVSGDQMLSI 300
           ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ+LLGQLGLVSGDQMLSI
Sbjct: 241 ALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQILLGQLGLVSGDQMLSI 300

Query: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR
Sbjct: 301 WRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 347

[Close]

BLAST of MELO3C012288 vs. NCBI nr
Match: gi|802620750|ref|XP_012075694.1| (PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Jatropha curcas])

HSP 1 Score: 495.0 bits (1273), Expect = 1.1e-136
Identity = 266/360 (73.89%), Postives = 298/360 (82.78%), Query Frame = 1


Query: 1   MGSISGSLSSHLQLSHCRF----SARTSQSQLTSVRI-----SPTLRRTKLRLTGFLSRR 60
           MG+ + +L  HLQL  C +    S +  Q Q  S++      S +LRR +LR  G  + R
Sbjct: 1   MGTTATALIPHLQLHGCFYRCFDSIKNHQQQPASLQFNNNSSSSSLRRGRLRFDGSPNTR 60

Query: 61  NFNRFVC-SAVDDDVREKQTELGGGNGSTVVEDVPDIAKNSTNGA---PDKSDIYNFLYP 120
           +F++ VC +AVDDD+ EKQ  L     S+ +ED  D+  +S        + S IYNFLYP
Sbjct: 61  SFSKVVCFAAVDDDIGEKQ--LDSPTTSSALEDRADMLDSSQENFGQDTEGSAIYNFLYP 120

Query: 121 SKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRF 180
           SK+LLPDDKEMS+FDHLEELRQRIFVSVLAVG AI+GCFAFSK+LI+LLEAPVK QGVRF
Sbjct: 121 SKELLPDDKEMSIFDHLEELRQRIFVSVLAVGGAILGCFAFSKELIMLLEAPVKVQGVRF 180

Query: 181 LQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFY 240
           LQL PGEFFFTTLKVSGYCGLLLGSP+ILYEIIAFVLPGLTR ER+FL PIVLGSS+LFY
Sbjct: 181 LQLAPGEFFFTTLKVSGYCGLLLGSPIILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFY 240

Query: 241 AGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLG 300
           AGIAFSY+VLTPAALNFFVSYAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ LLG
Sbjct: 241 AGIAFSYLVLTPAALNFFVSYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLG 300

Query: 301 QLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           Q+GLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKL+GR
Sbjct: 301 QVGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAAPLLGLYLGGAWVVKLTGR 358

[Close]

BLAST of MELO3C012288 vs. NCBI nr
Match: gi|728848095|gb|KHG27538.1| (Sec-independent translocase protein TatC [Gossypium arboreum])

HSP 1 Score: 491.9 bits (1265), Expect = 9.3e-136
Identity = 268/360 (74.44%), Postives = 294/360 (81.67%), Query Frame = 1


Query: 1   MGSI--SGSLSSHLQLSHCRF----SARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFN 60
           MGS   S +L SHLQL+ C F    S RT Q +  S++   + RR KL        + F 
Sbjct: 1   MGSANTSAALISHLQLNRCCFKLVESTRT-QLEFNSLKFRLS-RRGKLEFAASRRGKGFR 60

Query: 61  RFVC-SAVDDDVRE-KQTELGGGNGSTVVEDVPDIAKNSTNGAP-----DKSDIYNFLYP 120
             VC +AVDDDV+E +Q        ++  ED PD+A  S   AP     + S +YNFLYP
Sbjct: 61  TAVCFAAVDDDVKENRQQVFSETRSASATEDRPDVANISPEEAPFEQNNEGSSLYNFLYP 120

Query: 121 SKDLLPDDKEMSVFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRF 180
            KDLLPDDKEM++FDHLEELRQRIFVSVLAVGAAI+GCFAFSK+LI+ LEAPVK QGVRF
Sbjct: 121 DKDLLPDDKEMTIFDHLEELRQRIFVSVLAVGAAILGCFAFSKELIVFLEAPVKAQGVRF 180

Query: 181 LQLGPGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFY 240
           LQL PGEFFFTTLKVSGYCGLLLGSPVILYEII+FVLPGLTR ER+FL PIVLGSS+LFY
Sbjct: 181 LQLAPGEFFFTTLKVSGYCGLLLGSPVILYEIISFVLPGLTRAERRFLGPIVLGSSVLFY 240

Query: 241 AGIAFSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLG 300
           AGIAFSY+VLTPAALNFFVSYAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ LLG
Sbjct: 241 AGIAFSYLVLTPAALNFFVSYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLG 300

Query: 301 QLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           QLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKL+GR
Sbjct: 301 QLGLVSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQMLLAAPLLGLYLGGAWVVKLTGR 358

[Close]

BLAST of MELO3C012288 vs. NCBI nr
Match: gi|823210415|ref|XP_012438244.1| (PREDICTED: sec-independent protein translocase protein TATC, chloroplastic isoform X2 [Gossypium raimondii])

HSP 1 Score: 490.7 bits (1262), Expect = 2.1e-135
Identity = 264/356 (74.16%), Postives = 291/356 (81.74%), Query Frame = 1


Query: 3   SISGSLSSHLQLSHCRF----SARTSQSQLTSVRISPTLRRTKLRLTGFLSRRNFNRFVC 62
           S S +L SHLQL+ C F    S RT Q +  S++   + RR KL        + F   VC
Sbjct: 5   STSAALISHLQLNRCCFKLVESTRT-QLEFNSLKFRHS-RRGKLEFAASRRGKGFRTAVC 64

Query: 63  -SAVDDDVRE-KQTELGGGNGSTVVEDVPDIAKNSTNGAP-----DKSDIYNFLYPSKDL 122
            +AVDDDV+E +Q        ++  ED PD+   S   AP     + S +YNFLYP KDL
Sbjct: 65  FAAVDDDVKENRQQVFSETRSASATEDRPDVVNISPEEAPFEQNNEGSSLYNFLYPDKDL 124

Query: 123 LPDDKEMSVFDHLEELRQRIFVSVLAVGAAIIGCFAFSKDLILLLEAPVKEQGVRFLQLG 182
           LPDDKEM++FDHLEELRQRIFVSVLAVGAAI+GCFAFSK+LI+ LEAPVK QGVRFLQL 
Sbjct: 125 LPDDKEMTIFDHLEELRQRIFVSVLAVGAAILGCFAFSKELIVFLEAPVKVQGVRFLQLA 184

Query: 183 PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRTERQFLAPIVLGSSILFYAGIA 242
           PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTR ER+FL PIVLGSS+LFYAGIA
Sbjct: 185 PGEFFFTTLKVSGYCGLLLGSPVILYEIIAFVLPGLTRAERRFLGPIVLGSSVLFYAGIA 244

Query: 243 FSYIVLTPAALNFFVSYAEGAVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQVLLGQLGL 302
           FSY+VLTPAALNFFV+YAEG VESLWSIDQYFEFVLVLMFSTGLSFQVPVIQ LLGQLGL
Sbjct: 245 FSYLVLTPAALNFFVTYAEGVVESLWSIDQYFEFVLVLMFSTGLSFQVPVIQFLLGQLGL 304

Query: 303 VSGDQMLSIWRYVVVGAVVAAAVLTPSTDPLTQVLLAAPLLGLYLGGAWVVKLSGR 348
           VSGDQMLSIWRYVVVGAV+AAAVLTPSTDPLTQ+LLAAPLLGLYLGGAWVVKL+GR
Sbjct: 305 VSGDQMLSIWRYVVVGAVIAAAVLTPSTDPLTQMLLAAPLLGLYLGGAWVVKLTGR 358

The following BLAST results are available for this feature:

BLAST of MELO3C012288 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TATC_PEA	4.9e-129	74.19	Sec-independent protein translocase protein TATC, chloroplastic OS=Pisum sativum...	[more]
TATC_ARATH	2.3e-126	70.14	Sec-independent protein translocase protein TATC, chloroplastic OS=Arabidopsis t...	[more]
TATC_MAIZE	1.3e-124	72.12	Sec-independent protein translocase protein TATC, chloroplastic OS=Zea mays GN=T...	[more]
TATC_ORYSJ	1.4e-123	73.33	Sec-independent protein translocase protein TATC, chloroplastic OS=Oryza sativa ...	[more]
TATC_SYNY3	3.2e-80	62.18	Sec-independent protein translocase protein TatC OS=Synechocystis sp. (strain PC...	[more]

BLAST of MELO3C012288 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTA2_CUCSA	3.6e-187	97.41	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G611060 PE=3 SV=1	[more]
A0A067KRT6_JATCU	7.6e-137	73.89	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09288 PE=3 SV=1	[more]
A0A0B0PM57_GOSAR	6.5e-136	74.44	Sec-independent translocase protein TatC OS=Gossypium arboreum GN=F383_13666 PE=...	[more]
A0A0D2T199_GOSRA	1.4e-135	74.16	Uncharacterized protein OS=Gossypium raimondii GN=B456_008G158400 PE=3 SV=1	[more]
A0A0V0I342_SOLCH	2.1e-134	73.46	Putative sec-independent protein translocase protein TATC, chloroplastic-like OS...	[more]

BLAST of MELO3C012288 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01110.1	1.3e-127	70.14	Sec-independent periplasmic protein translocase	[more]

BLAST of MELO3C012288 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659091655\|ref\|XP_008446660.1\|	7.7e-191	100.00	PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucu...	[more]
gi\|449434578\|ref\|XP_004135073.1\|	5.2e-187	97.41	PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Cucu...	[more]
gi\|802620750\|ref\|XP_012075694.1\|	1.1e-136	73.89	PREDICTED: sec-independent protein translocase protein TATC, chloroplastic [Jatr...	[more]
gi\|728848095\|gb\|KHG27538.1\|	9.3e-136	74.44	Sec-independent translocase protein TatC [Gossypium arboreum]	[more]
gi\|823210415\|ref\|XP_012438244.1\|	2.1e-135	74.16	PREDICTED: sec-independent protein translocase protein TATC, chloroplastic isofo...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002033	TatC
IPR019820	Sec-indep_translocase_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009902	chloroplast relocation
biological_process	GO:0006364	rRNA processing
biological_process	GO:0008150	biological_process
biological_process	GO:0009567	double fertilization forming a zygote and endosperm
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0042793	transcription from plastid promoter
biological_process	GO:0035304	regulation of protein dephosphorylation
biological_process	GO:0071806	protein transmembrane transport
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0000023	maltose metabolic process
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0031361	integral component of thylakoid membrane
cellular_component	GO:0043235	receptor complex
cellular_component	GO:0033281	TAT protein transport complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0009977	proton motive force dependent protein transmembrane transporter activity
molecular_function	GO:0003674	molecular_function

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
MU53715	melon EST collection version 4.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO3C012288T1	MELO3C012288T1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
MU53715	MU53715	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of melon
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002033	Sec-independent periplasmic protein translocase TatC	PRINTS	PR01840	TATCFAMILY	coord: 119..146 score: 4.1E-43coord: 193..211 score: 4.1E-43coord: 211..237 score: 4.1E-43coord: 262..290 score: 4.1
IPR002033	Sec-independent periplasmic protein translocase TatC	HAMAP	MF_00902	TatC	coord: 113..347 score: 17
IPR002033	Sec-independent periplasmic protein translocase TatC	PFAM	PF00902	TatC	coord: 122..330 score: 1.2
IPR002033	Sec-independent periplasmic protein translocase TatC	TIGRFAMs	TIGR00945	TIGR00945	coord: 121..335 score: 6.0
IPR019820	Sec-independent periplasmic protein translocase, conserved site	PROSITE	PS01218	TATC	coord: 262..281 scor
None	No IPR available	PANTHER	PTHR30371	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC	coord: 93..347 score: 1.1E
None	No IPR available	PANTHER	PTHR30371:SF3	SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC, CHLOROPLASTIC	coord: 93..347 score: 1.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
MELO3C012288	Csa5G611060	Cucumber (Chinese Long) v2	cumeB377
MELO3C012288	Cla020433	Watermelon (97103) v1	mewmB061
MELO3C012288	ClCG05G022340	Watermelon (Charleston Gray)	mewcgB062
MELO3C012288	Cla97C05G104130	Watermelon (97103) v2	mewmbB060
MELO3C012288	Bhi07G001055	Wax gourd	mewgoB072
MELO3C012288	CSPI05G25690	Wild cucumber (PI 183967)	cpimeB369
MELO3C012288	CmaCh04G014780	Cucurbita maxima (Rimu)	cmameB640
MELO3C012288	CmoCh04G015490	Cucurbita moschata (Rifu)	cmomeB631
MELO3C012288	Lsi04G002100	Bottle gourd (USVL1VR-Ls)	lsimeB281
MELO3C012288	Cp4.1LG01g13950	Cucurbita pepo (Zucchini)	cpemeB363
MELO3C012288	CsGy5G025120	Cucumber (Gy14) v2	cgybmeB319
MELO3C012288	Carg01865	Silver-seed gourd	carmeB0834
MELO3C012288	CsaV3_5G034760	Cucumber (Chinese Long) v3	cucmeB381

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
MELO3C012288	Watermelon (97103) v2	mewmbB042
MELO3C012288	Watermelon (97103) v2	mewmbB063
MELO3C012288	Wax gourd	mewgoB053
MELO3C012288	Melon (DHL92) v3.5.1	memeB006
MELO3C012288	Melon (DHL92) v3.5.1	memeB028
MELO3C012288	Cucumber (Gy14) v1	cgymeB154
MELO3C012288	Cucumber (Gy14) v1	cgymeB468
MELO3C012288	Cucumber (Gy14) v1	cgymeB474
MELO3C012288	Cucurbita maxima (Rimu)	cmameB083
MELO3C012288	Cucurbita maxima (Rimu)	cmameB264
MELO3C012288	Cucurbita maxima (Rimu)	cmameB351
MELO3C012288	Cucurbita maxima (Rimu)	cmameB661
MELO3C012288	Cucurbita moschata (Rifu)	cmomeB254
MELO3C012288	Cucurbita moschata (Rifu)	cmomeB344
MELO3C012288	Cucurbita moschata (Rifu)	cmomeB654
MELO3C012288	Wild cucumber (PI 183967)	cpimeB006
MELO3C012288	Wild cucumber (PI 183967)	cpimeB364
MELO3C012288	Cucumber (Chinese Long) v2	cumeB372
MELO3C012288	Watermelon (Charleston Gray)	mewcgB054
MELO3C012288	Watermelon (Charleston Gray)	mewcgB064
MELO3C012288	Watermelon (97103) v1	mewmB066
MELO3C012288	Watermelon (97103) v1	mewmB081
MELO3C012288	Cucurbita pepo (Zucchini)	cpemeB024
MELO3C012288	Cucurbita pepo (Zucchini)	cpemeB160
MELO3C012288	Cucurbita pepo (Zucchini)	cpemeB596
MELO3C012288	Bottle gourd (USVL1VR-Ls)	lsimeB016
MELO3C012288	Bottle gourd (USVL1VR-Ls)	lsimeB389
MELO3C012288	Cucumber (Gy14) v2	cgybmeB006
MELO3C012288	Cucumber (Gy14) v2	cgybmeB316
MELO3C012288	Silver-seed gourd	carmeB0792
MELO3C012288	Silver-seed gourd	carmeB1019
MELO3C012288	Cucumber (Chinese Long) v3	cucmeB006
MELO3C012288	Cucumber (Chinese Long) v3	cucmeB376