Cp4.1LG01g13430 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g13430
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Unknown protein
Location	Cp4.1LG01 : 8152905 .. 8155526 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAGGCAACAAGCCCCTTTCACCGCATGGCGTTAATGAATCATTCCTCGCGCACACTGGGCGGCAGGTTTACCAATTTATTTGCACTCCAATTCCCTGCCGGAAATTTCCAAGTTTTTCGCACAAGCAATTGGTGCAGCAATCACTGCAACCCCTCTCTCTCCCCCTCAACTTAAGCAGATACCGGTGGACCCACCAAGCAACTGGGGAGTGGGGTTTTGGGGAAAATTGGCCCGCGCCGCCAGGTGGGGCTGGTTGAAACTGGCAGGAAAAGAGGGCGGCGGTGGCGGTTGTGATGGTGCCGACGGTAGAGAAGAGGAAGTACCGTTTTCCGGCGAATAATCCACAAATTTGAAGAATGTATGAGAAGAAACGCATATCAGAGACAGTTCGAAATGGTGGGTTAGATAAGAATTTGAATTTTACGAGATTTTTTTTTTGGATAAGTAGATATTTATTTATTGGAACTATTTTGGTGTCTAATACTAAGTTTAGGAGGTAGGTGAGGGAGGTACATGTCTGCAAGTATCTAAGAGAGGGGAAAAAAATCATTAAATTGATTCCATTTCACTTGGCCAATTGAAATTAATGAAGCAATTAACATCTAGACAGGAGCCGTGTAAGCTTAACGCTCAAATGGAGCCCCTATTTTCTGTATCTGTCACAATTCTGTCTCCTAGCAGAGTACTTTATTTGCTCTCATTTCACTATAAAATTCTACACCCAATCGAACTTCAACAGGAGAATCTCCACATAACCATGGATTTCAAAGCAGAGCTCAACACACAAGTAGCAGAAGAAGATGATGGTTACTATGCTGAGATTAGGAAACAAATCATTCTACTTTTGACAGCACTTGAGGACGACGACGACGTCGAACGACCTCCCAAAACTGCAGCAAAACGAGGTGCAGAACAAAGCGGTCGTCGTCACCCACAGCCAGAGAGAAACTTGAGTTGGTGTCTAAATGGGAATGATTTAGAAGGACCTGTTTGGCATGTCAATTCATGGGAGAATGGGAATGGAACAGGAGTTTTCATCCCTCAAGCAGTCAAATACAAAAGATACAGTATTTTCAGTATGTTCCTGTCTTGTCTTTCGAGTTTCATAAGCACAAGGCAATACTTAACATAACATCACTTCTTCATTTTGTGTTGCAGGAAGGATGAGAAAGCATGAGAGAAAAGAAAAACACAGACTAAACAGACAACAAGACCAAGGATCATCCGTGTTTTCAGGAGGCTAAATTGCAAAAATTACTTCCGAACTTTACTTTTCTTTCAAAAGTTGCAATATTCGTCAAAATTTTCAAGTTACTAATATATTTTAATCTCGGAATCTTTATGTTATTTCACAGTTGAATGATTGTTACAGTAACAAAAGTAAACTACAAAACTCAAACAAAAATAGTTGCATTCAAGTGAATAAAGCTAACAAATTAGGTTGTGCATGGTGGGATCGAAATTCATGCCTGTTCAAGGTCTTCTCTGCGACTGTCAAACCGATTCCCCGTTAGCACTTCCCTCGCACGTGCACTCCGATGCTGAAGGCGCTGGTGAAGCATCTCCGAAATCTGGTTGAAGAATTCAGCATCCCATTTCTGAATCAACAATGGATCTTCTGCATAACAGATGTAGATGGATGTAACGGCACTTTCCACAACTACTATTGCAAGGCCTACCTGAAATTTTCAAAAAGGATAGACATCAAAGAACAGTTTATTCACAACAATTTAGAACTAATACTCATTAGGTGAAAGAAATTATGAAATCTCAATTCATAGACAAGAATCAGCAAGCAAAAAGTTAAGGAAAATAAGTTTTTAAAACGTATTTACCAAGACCATTCCCATCAATGTTGCAGTACATGCCACCATCGACACCTTATCCTTCCACTTAATCCATGTCCAAATACCTGAGCAAGTTCCAGCAGTGAGCCCACCCATGATGGTGCTCATCAGAAGAACAGCACCCGAGCAATCGTAAGCAACAAGAGCTTCGACACCGGTTGACTGTAATAACTCCCATGCATCTCTGGCTGAACGGTTGAAGCTTTTACCATAAACTGCTATCTGAAGCAAAGAGATGCAGGGAAAACTATGCGGTAATCATGGCGAAACCATACTAGAAATTCACACAATTCAGAGTACAAGTAAAACTCGATTATTCAACTTGACATTAGGTAAAAGGGAATACCTGGACATACGCATATTTGTTAAAGAAACGAACAAGAGTCTCGACGAGATGAAACAAAAAATCAACACAGCAAAGCAGACACTCGTTCTGGCCAATCTTTGATCGGATTCCTCTGATCTGAAAGTTACCGAATTAGTTTGAAATGTACAAACCAAAAGAAACAATCGACAGCGTGGAAGGCAATAAAGAGTTTGCACGAATACCTCCCACCGCAGTGTCCGAATGGGAGCTGTAAAAAGCGATCCATAGCAAATGCTACCAAAAGATGTTGTCACAGCATATCGTGAAGCCTTCATCAATGACTTCGATGGCATAGATGATGACTCTCTGCCGCCATGGAATAGGACTAGAAACACCATTCCCGAAACTATAACATGTAGAGTATTACAAAAAACAACACCAGCCCAAAACAAGCTTATGGAGAAAA

mRNA sequence

TAAAGGCAACAAGCCCCTTTCACCGCATGGCGTTAATGAATCATTCCTCGCGCACACTGGGCGGCAGGTTTACCAATTTATTTGCACTCCAATTCCCTGCCGGAAATTTCCAAGTTTTTCGCACAAGCAATTGGTGCAGCAATCACTGCAACCCCTCTCTCTCCCCCTCAACTTAAGCAGATACCGGTGGACCCACCAAGCAACTGGGGAGTGGGGTTTTGGGGAAAATTGGCCCGCGCCGCCAGGTGGGGCTGGTTGAAACTGGCAGGAAAAGAGGGCGGCGGTGGCGGTTGTGATGGTGCCGACGGTAGAGAAGAGGAAGTACCGTTTTCCGGCGAATAATCCACAAATTTGAAGAATGTATGAGAAGAAACGCATATCAGAGACAGTTCGAAATGGAGAATCTCCACATAACCATGGATTTCAAAGCAGAGCTCAACACACAAGTAGCAGAAGAAGATGATGGTTACTATGCTGAGATTAGGAAACAAATCATTCTACTTTTGACAGCACTTGAGGACGACGACGACGTCGAACGACCTCCCAAAACTGCAGCAAAACGAGGTGCAGAACAAAGCGGTCGTCGTCACCCACAGCCAGAGAGAAACTTGAGTTGGTGTCTAAATGGGAATGATTTAGAAGGACCTGTTTGGCATGTCAATTCATGGGAGAATGGGAATGGAACAGGAGTTTTCATCCCTCAAGCAGTCAAATACAAAAGATACAGTATTTTCAGAAGGATGAGAAAGCATGAGAGAAAAGAAAAACACAGACTAAACAGACAACAAGACCAAGGATCATCCGTGTTTTCAGGAGGCTAAATTGCAAAAATTACTTCCGAACTTTACTTTTCTTTCAAAAGTTGCAATATTCGTCAAAATTTTCAAGTTACTAATATATTTTAATCTCGGAATCTTTATGTTATTTCACAGTTGAATGATTGTTACAGTAACAAAAGTAAACTACAAAACTCAAACAAAAATAGTTGCATTCAAGTGAATAAAGCTAACAAATTAGGTTGTGCATGGTGGGATCGAAATTCATGCCTGTTCAAGGTCTTCTCTGCGACTGTCAAACCGATTCCCCGTTAGCACTTCCCTCGCACGTGCACTCCGATGCTGAAGGCGCTGGTGAAGCATCTCCGAAATCTGGTTGAAGAATTCAGCATCCCATTTCTGAATCAACAATGGATCTTCTGCATAACAGATGTAGATGGATGTAACGGCACTTTCCACAACTACTATTGCAAGGCCTACCTGAAATTTTCAAAAAGGATAGACATCAAAGAACAGTTTATTCACAACAATTTAGAACTAATACTCATTAGGTGAAAGAAATTATGAAATCTCAATTCATAGACAAGAATCAGCAAGCAAAAAGTTAAGGAAAATAAGTTTTTAAAACGTATTTACCAAGACCATTCCCATCAATGTTGCAGTACATGCCACCATCGACACCTTATCCTTCCACTTAATCCATGTCCAAATACCTGAGCAAGTTCCAGCAGTGAGCCCACCCATGATGGTGCTCATCAGAAGAACAGCACCCGAGCAATCGTAAGCAACAAGAGCTTCGACACCGGTTGACTGTAATAACTCCCATGCATCTCTGGCTGAACGGTTGAAGCTTTTACCATAAACTGCTATCTGAAGCAAAGAGATGCAGGGAAAACTATGCGGTAATCATGGCGAAACCATACTAGAAATTCACACAATTCAGAGTACAAGTAAAACTCGATTATTCAACTTGACATTAGGTAAAAGGGAATACCTGGACATACGCATATTTGTTAAAGAAACGAACAAGAGTCTCGACGAGATGAAACAAAAAATCAACACAGCAAAGCAGACACTCGTTCTGGCCAATCTTTGATCGGATTCCTCTGATCTGAAAGTTACCGAATTAGTTTGAAATGTACAAACCAAAAGAAACAATCGACAGCGTGGAAGGCAATAAAGAGTTTGCACGAATACCTCCCACCGCAGTGTCCGAATGGGAGCTGTAAAAAGCGATCCATAGCAAATGCTACCAAAAGATGTTGTCACAGCATATCGTGAAGCCTTCATCAATGACTTCGATGGCATAGATGATGACTCTCTGCCGCCATGGAATAGGACTAGAAACACCATTCCCGAAACTATAACATGTAGAGTATTACAAAAAACAACACCAGCCCAAAACAAGCTTATGGAGAAAA

Coding sequence (CDS)

ATGAGAAGAAACGCATATCAGAGACAGTTCGAAATGGAGAATCTCCACATAACCATGGATTTCAAAGCAGAGCTCAACACACAAGTAGCAGAAGAAGATGATGGTTACTATGCTGAGATTAGGAAACAAATCATTCTACTTTTGACAGCACTTGAGGACGACGACGACGTCGAACGACCTCCCAAAACTGCAGCAAAACGAGGTGCAGAACAAAGCGGTCGTCGTCACCCACAGCCAGAGAGAAACTTGAGTTGGTGTCTAAATGGGAATGATTTAGAAGGACCTGTTTGGCATGTCAATTCATGGGAGAATGGGAATGGAACAGGAGTTTTCATCCCTCAAGCAGTCAAATACAAAAGATACAGTATTTTCAGAAGGATGAGAAAGCATGAGAGAAAAGAAAAACACAGACTAAACAGACAACAAGACCAAGGATCATCCGTGTTTTCAGGAGGCTAA

Protein sequence

MRRNAYQRQFEMENLHITMDFKAELNTQVAEEDDGYYAEIRKQIILLLTALEDDDDVERPPKTAAKRGAEQSGRRHPQPERNLSWCLNGNDLEGPVWHVNSWENGNGTGVFIPQAVKYKRYSIFRRMRKHERKEKHRLNRQQDQGSSVFSGG

Homology

[Close]

BLAST of Cp4.1LG01g13430 vs. TrEMBL
Match: A0A0A0KT55_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G608470 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.6e-43
Identity = 92/120 (76.67%), Postives = 102/120 (85.00%), Query Frame = 1


Query: 19  MDFKAELNTQVAEEDDGYYAEIRKQIILLLTALEDDDDVERPPKTAAKRGAEQSGRR-HP 78
           MDFKAELNTQ+ EE+D YYAEIRKQI LLLTA +DDD+VE+ PKTAAK GAE   R   P
Sbjct: 1   MDFKAELNTQITEEEDCYYAEIRKQISLLLTAYDDDDEVEQLPKTAAKPGAEVRQRDCWP 60

Query: 79  QPERNLSWCLNGNDLEGPVWHVNSWENGNGTGVFIPQAVKYKRYSIFRRMRKHERKEKHR 138
           Q ERN+S C NGND + PVWHVNSWENGNGTGVFIPQAVKYK+Y +FRR+RKHERKEKHR
Sbjct: 61  QLERNMSLCPNGNDFDEPVWHVNSWENGNGTGVFIPQAVKYKKYCVFRRLRKHERKEKHR 120

[Close]

BLAST of Cp4.1LG01g13430 vs. TrEMBL
Match: A0A067FRN8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042679mg PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.9e-09
Identity = 46/101 (45.54%), Postives = 59/101 (58.42%), Query Frame = 1


Query: 32  EDDGYYAEIRKQIILLLTALEDDDD---VERPPKT---AAKRGAEQ---SGRRHPQPERN 91
           EDD +YAE+R+QI LLLTA ED D+   +ER   +   A KRG+     S     QP   
Sbjct: 16  EDDVFYAELRRQI-LLLTADEDGDEDHFLERKHSSSISAGKRGSSHGLTSFSSALQPGSY 75

Query: 92  LSWCLNGNDLE-GPVWHVNSWENGNGTGVFIPQAVKYKRYS 123
            +WC + N+    P W VN W  GNGTGVFIP  VK +R++
Sbjct: 76  FNWCESENNSNTAPTWLVNLWRYGNGTGVFIPHIVKSRRHN 115

[Close]

BLAST of Cp4.1LG01g13430 vs. TrEMBL
Match: B9ST25_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0353710 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 5.0e-08
Identity = 44/96 (45.83%), Postives = 55/96 (57.29%), Query Frame = 1


Query: 31  EEDDGYYAEIRKQIILLLTALEDDDDVERPPKT--AAKRGAEQSGRRHP---QPERNLSW 90
           E +D +YAE+R+QI LLLTA  DD D  R  K+  + K G+ +     P   QPE   +W
Sbjct: 28  EAEDVFYAELRRQI-LLLTADSDDFDKIRCEKSLPSCKPGSNRLTGSFPVRLQPESYFNW 87

Query: 91  CLNGNDLEG-PVWHVNSWENGNGTGVFIPQAVKYKR 121
               N  +  P W VN W NGNGTGVFIP+A K  R
Sbjct: 88  WERQNTNDSVPTWLVNLWRNGNGTGVFIPRAAKAGR 122

[Close]

BLAST of Cp4.1LG01g13430 vs. TrEMBL
Match: A0A0D2TXF6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G081200 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.5e-07
Identity = 47/107 (43.93%), Postives = 55/107 (51.40%), Query Frame = 1


Query: 32  EDDGYYAEIRKQIILLLTALEDDDDVERPP--KTAAKRGAEQSGR-RHPQPERNLSWCLN 91
           EDDG+YAEIR+Q ILLLTA EDDDD ++     +   RGA    R RH       SWC  
Sbjct: 8   EDDGFYAEIRRQ-ILLLTA-EDDDDYQQTETNNSPPTRGAANLCRLRHAS---YFSWCAG 67

Query: 92  GNDLEGPVWHVNSWENGN----GTGVFIPQAVKYKRYSIFRRMRKHE 132
                 P W  N W N N    GTGVFIP     +R+    RM K +
Sbjct: 68  EKTSSAPTWLSNLWRNDNSNRTGTGVFIPHINNSRRWRRPSRMSKRK 109

[Close]

BLAST of Cp4.1LG01g13430 vs. TrEMBL
Match: A0A061EB05_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_011844 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.6e-06
Identity = 43/108 (39.81%), Postives = 54/108 (50.00%), Query Frame = 1


Query: 31  EEDDGYYAEIRKQIILLLTALEDDDDVERPPKTAAKRGAEQSGRRHPQPERNL------- 90
           +EDD +YA+IR++I LLLTA +D+D  E         G   S R       +L       
Sbjct: 17  DEDDVFYADIRRRI-LLLTADDDEDCQETKSFHPVCNGKPGSNRAVGNLSSSLQYGGYFS 76

Query: 91  SWCLNGNDLEGPVWHVNSWENGNGTGVFIPQAVKYKRYSIFRRMRKHE 132
           SW     D   P W  N W NGNGTGVFIP  VK +R+    RM K +
Sbjct: 77  SWESENTD-SVPTWLANLWRNGNGTGVFIPHIVKSRRHHRPGRMNKRK 122

[Close]

BLAST of Cp4.1LG01g13430 vs. NCBI nr
Match: gi|778705924|ref|XP_011655764.1| (PREDICTED: uncharacterized protein LOC105435583 [Cucumis sativus])

HSP 1 Score: 183.7 bits (465), Expect = 2.4e-43
Identity = 92/120 (76.67%), Postives = 102/120 (85.00%), Query Frame = 1


Query: 19  MDFKAELNTQVAEEDDGYYAEIRKQIILLLTALEDDDDVERPPKTAAKRGAEQSGRR-HP 78
           MDFKAELNTQ+ EE+D YYAEIRKQI LLLTA +DDD+VE+ PKTAAK GAE   R   P
Sbjct: 1   MDFKAELNTQITEEEDCYYAEIRKQISLLLTAYDDDDEVEQLPKTAAKPGAEVRQRDCWP 60

Query: 79  QPERNLSWCLNGNDLEGPVWHVNSWENGNGTGVFIPQAVKYKRYSIFRRMRKHERKEKHR 138
           Q ERN+S C NGND + PVWHVNSWENGNGTGVFIPQAVKYK+Y +FRR+RKHERKEKHR
Sbjct: 61  QLERNMSLCPNGNDFDEPVWHVNSWENGNGTGVFIPQAVKYKKYCVFRRLRKHERKEKHR 120

[Close]

BLAST of Cp4.1LG01g13430 vs. NCBI nr
Match: gi|659091473|ref|XP_008446569.1| (PREDICTED: uncharacterized protein LOC103489264 [Cucumis melo])

HSP 1 Score: 181.8 bits (460), Expect = 9.0e-43
Identity = 95/137 (69.34%), Postives = 106/137 (77.37%), Query Frame = 1


Query: 14  NLHITMDFKAELNTQVAEEDDGYYAEIRKQIILLLTALEDDDDVERPPKTAAKRGAE-QS 73
           N  ITMDFKAELNTQ+ EE+D YYAEIRKQIILLLTA   DDD E+PP+TAAK GA+ Q 
Sbjct: 53  NFTITMDFKAELNTQITEEEDCYYAEIRKQIILLLTAY--DDDEEQPPRTAAKPGAKVQQ 112

Query: 74  GRRHPQPERNLSWCLNGNDLEGPVWHVNSWENGNGTGVFIPQAVKYKRYSIFRRMRKHER 133
             R PQ + NLS C NG D E PVWHVNSWENGNGTGVFIPQAVKYK+Y + RR+RKHER
Sbjct: 113 RDRWPQIKGNLSLCPNGKDFEEPVWHVNSWENGNGTGVFIPQAVKYKKYCVLRRLRKHER 172

Query: 134 KEKHRLNRQQDQGSSVF 150
           KEKHR    + +  S F
Sbjct: 173 KEKHRQKNIETEDHSCF 187

[Close]

BLAST of Cp4.1LG01g13430 vs. NCBI nr
Match: gi|641851173|gb|KDO70044.1| (hypothetical protein CISIN_1g042679mg [Citrus sinensis])

HSP 1 Score: 68.9 bits (167), Expect = 8.5e-09
Identity = 46/101 (45.54%), Postives = 59/101 (58.42%), Query Frame = 1


Query: 32  EDDGYYAEIRKQIILLLTALEDDDD---VERPPKT---AAKRGAEQ---SGRRHPQPERN 91
           EDD +YAE+R+QI LLLTA ED D+   +ER   +   A KRG+     S     QP   
Sbjct: 16  EDDVFYAELRRQI-LLLTADEDGDEDHFLERKHSSSISAGKRGSSHGLTSFSSALQPGSY 75

Query: 92  LSWCLNGNDLE-GPVWHVNSWENGNGTGVFIPQAVKYKRYS 123
            +WC + N+    P W VN W  GNGTGVFIP  VK +R++
Sbjct: 76  FNWCESENNSNTAPTWLVNLWRYGNGTGVFIPHIVKSRRHN 115

[Close]

BLAST of Cp4.1LG01g13430 vs. NCBI nr
Match: gi|223531423|gb|EEF33257.1| (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 65.9 bits (159), Expect = 7.2e-08
Identity = 44/96 (45.83%), Postives = 55/96 (57.29%), Query Frame = 1


Query: 31  EEDDGYYAEIRKQIILLLTALEDDDDVERPPKT--AAKRGAEQSGRRHP---QPERNLSW 90
           E +D +YAE+R+QI LLLTA  DD D  R  K+  + K G+ +     P   QPE   +W
Sbjct: 28  EAEDVFYAELRRQI-LLLTADSDDFDKIRCEKSLPSCKPGSNRLTGSFPVRLQPESYFNW 87

Query: 91  CLNGNDLEG-PVWHVNSWENGNGTGVFIPQAVKYKR 121
               N  +  P W VN W NGNGTGVFIP+A K  R
Sbjct: 88  WERQNTNDSVPTWLVNLWRNGNGTGVFIPRAAKAGR 122

[Close]

BLAST of Cp4.1LG01g13430 vs. NCBI nr
Match: gi|1000946622|ref|XP_015580855.1| (PREDICTED: uncharacterized protein LOC8269713 [Ricinus communis])

HSP 1 Score: 65.9 bits (159), Expect = 7.2e-08
Identity = 44/96 (45.83%), Postives = 55/96 (57.29%), Query Frame = 1


Query: 31  EEDDGYYAEIRKQIILLLTALEDDDDVERPPKT--AAKRGAEQSGRRHP---QPERNLSW 90
           E +D +YAE+R+QI LLLTA  DD D  R  K+  + K G+ +     P   QPE   +W
Sbjct: 28  EAEDVFYAELRRQI-LLLTADSDDFDKIRCEKSLPSCKPGSNRLTGSFPVRLQPESYFNW 87

Query: 91  CLNGNDLEG-PVWHVNSWENGNGTGVFIPQAVKYKR 121
               N  +  P W VN W NGNGTGVFIP+A K  R
Sbjct: 88  WERQNTNDSVPTWLVNLWRNGNGTGVFIPRAAKAGR 122

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g13430 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g13430 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KT55_CUCSA	1.6e-43	76.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G608470 PE=4 SV=1	[more]
A0A067FRN8_CITSI	5.9e-09	45.54	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g042679mg PE=4 SV=1	[more]
B9ST25_RICCO	5.0e-08	45.83	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0353710 PE=4 SV=1	[more]
A0A0D2TXF6_GOSRA	2.5e-07	43.93	Uncharacterized protein OS=Gossypium raimondii GN=B456_013G081200 PE=4 SV=1	[more]
A0A061EB05_THECC	3.6e-06	39.81	Uncharacterized protein OS=Theobroma cacao GN=TCM_011844 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g13430 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG01g13430 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778705924\|ref\|XP_011655764.1\|	2.4e-43	76.67	PREDICTED: uncharacterized protein LOC105435583 [Cucumis sativus]	[more]
gi\|659091473\|ref\|XP_008446569.1\|	9.0e-43	69.34	PREDICTED: uncharacterized protein LOC103489264 [Cucumis melo]	[more]
gi\|641851173\|gb\|KDO70044.1\|	8.5e-09	45.54	hypothetical protein CISIN_1g042679mg [Citrus sinensis]	[more]
gi\|223531423\|gb\|EEF33257.1\|	7.2e-08	45.83	conserved hypothetical protein [Ricinus communis]	[more]
gi\|1000946622\|ref\|XP_015580855.1\|	7.2e-08	45.83	PREDICTED: uncharacterized protein LOC8269713 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG01g13430.1	Cp4.1LG01g13430.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34956	FAMILY NOT NAMED	coord: 23..127 score: 1.0
None	No IPR available	PANTHER	PTHR34956:SF1	SUBFAMILY NOT NAMED	coord: 23..127 score: 1.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG01g13430	Cucsa.283780	Cucumber (Gy14) v1	cgycpeB0756
Cp4.1LG01g13430	CmaCh04G015270	Cucurbita maxima (Rimu)	cmacpeB720
Cp4.1LG01g13430	CmoCh04G015970	Cucurbita moschata (Rifu)	cmocpeB673
Cp4.1LG01g13430	Cla020376	Watermelon (97103) v1	cpewmB436
Cp4.1LG01g13430	Csa5G608470	Cucumber (Chinese Long) v2	cpecuB422
Cp4.1LG01g13430	MELO3C012226	Melon (DHL92) v3.5.1	cpemeB382
Cp4.1LG01g13430	ClCG05G022920	Watermelon (Charleston Gray)	cpewcgB397
Cp4.1LG01g13430	CSPI05G25060	Wild cucumber (PI 183967)	cpecpiB421
Cp4.1LG01g13430	Lsi04G002780	Bottle gourd (USVL1VR-Ls)	cpelsiB364
Cp4.1LG01g13430	MELO3C012226.2	Melon (DHL92) v3.6.1	cpemedB443
Cp4.1LG01g13430	CsaV3_5G034090	Cucumber (Chinese Long) v3	cpecucB0524
Cp4.1LG01g13430	Bhi07G001127	Wax gourd	cpewgoB0572
Cp4.1LG01g13430	CsGy5G024540	Cucumber (Gy14) v2	cgybcpeB633
Cp4.1LG01g13430	Carg01825	Silver-seed gourd	carcpeB1177

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG01g13430	Cucumber (Chinese Long) v3	cpecucB0474
Cp4.1LG01g13430	Wax gourd	cpewgoB0514
Cp4.1LG01g13430	Wax gourd	cpewgoB0557
Cp4.1LG01g13430	Cucurbita pepo (Zucchini)	cpecpeB035
Cp4.1LG01g13430	Cucurbita pepo (Zucchini)	cpecpeB040
Cp4.1LG01g13430	Cucurbita pepo (Zucchini)	cpecpeB399
Cp4.1LG01g13430	Cucumber (Gy14) v1	cgycpeB0750
Cp4.1LG01g13430	Cucurbita maxima (Rimu)	cmacpeB429
Cp4.1LG01g13430	Cucurbita maxima (Rimu)	cmacpeB433
Cp4.1LG01g13430	Cucurbita moschata (Rifu)	cmocpeB115
Cp4.1LG01g13430	Cucurbita moschata (Rifu)	cmocpeB392
Cp4.1LG01g13430	Cucurbita moschata (Rifu)	cmocpeB398
Cp4.1LG01g13430	Wild cucumber (PI 183967)	cpecpiB381
Cp4.1LG01g13430	Cucumber (Chinese Long) v2	cpecuB381
Cp4.1LG01g13430	Bottle gourd (USVL1VR-Ls)	cpelsiB352
Cp4.1LG01g13430	Bottle gourd (USVL1VR-Ls)	cpelsiB371
Cp4.1LG01g13430	Watermelon (Charleston Gray)	cpewcgB388
Cp4.1LG01g13430	Watermelon (Charleston Gray)	cpewcgB401
Cp4.1LG01g13430	Watermelon (97103) v1	cpewmB427
Cp4.1LG01g13430	Watermelon (97103) v1	cpewmB470
Cp4.1LG01g13430	Melon (DHL92) v3.5.1	cpemeB363
Cp4.1LG01g13430	Melon (DHL92) v3.5.1	cpemeB395
Cp4.1LG01g13430	Cucumber (Gy14) v2	cgybcpeB063
Cp4.1LG01g13430	Cucumber (Gy14) v2	cgybcpeB648
Cp4.1LG01g13430	Melon (DHL92) v3.6.1	cpemedB423
Cp4.1LG01g13430	Melon (DHL92) v3.6.1	cpemedB458
Cp4.1LG01g13430	Silver-seed gourd	carcpeB1449