Cp4.1LG01g02610 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g02610
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionZinc finger SWIM domain-containing protein 7
LocationCp4.1LG01 : 2384511 .. 2388047 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAACGTGGGGGAGAAAATTTGTCAAAATGTTTGAAGTATTTAGCTTTTGCGCCTAAAAGTTATTAGAGGACCGACATATTTGTATAATTACATCTAATCGATATTAATTTTGTGGTGGATTCATTCAATAATCTGACCCAAAAAAGAAAAATAAAAATTTGTTGAATAATTTGGGGGAGAAATGGATTTAGATTATCCAATATTTCTATAAACAAAATTTAAAATCACACCCAGAAAAATTTGCTGATTTTTTACGAGGAATTTCCTCCAAAATGAGTGCGAGTACCCTCGCCGCCGAAGCAGTGTGGAAGCAGATCGAGTCGACTCGATCAGGTTGCGTTTATTCGATTATTTTCCTTACCTAATTTTCGGATTTTCGTCTTTTTGGTTCTCAATCTTGTGTTAAATCGACGATATCTTTGCTAAAAGAAGCTGAAACTGATTTCGCAGTGACCGACGATCAGCTTTCAATGTGAGTATTCTCGATTCCTTCCATTAGGAGAAGTTCTTCATCTTGTTATGTTTATGAATCTTCGAAGTTGACTGTGTCGGCGCTGGTTCCAGATTGCATTTCTTGTTTGGCAAGAACTTCGAGCGAGCTACTCGGATTGTGGATCAAAGTGGAGTGAAGAGAATTTCAGGCGATCCAAGCGGACGGTCCATCTTTCAGGTGATTACAGTATTTTTCATCTTATTTTTGTTGAAAATTCGATCAAACATCGATTTTAAGTTCACGGTTTCCATTAGGGTTTGCTTAAACTTCCCTAGAACAGATCGTAGTTACATTCTGCTTTTGTTTAAAGCCTCGTGAATGAATGGTCTTGAATTGAACCACGTTTTTTCTCCATCTCTCTAGTGGTAGAGAAGGATTTACACGACACTTAAGGAATGATTTGAGAAGGAATTACACTGTAGAATGCTGTTGGTTTGATATCATGTGCATTGTAGAATGTTGCTGGTTTGATATCATGTGCATTGTAGAATGTTGCTGGTTTGATATCATGTACATTGTAGAATGTTGCTGGTTTGATATCATGTACATTGTAGAATGTTGCTGGTTTGATATCATGTACATTGCTATGTATTACTGAACCTGAAAACTATATTCTTGAATGTGAATATGAGATTAAATCTTTAACCTATCGATTTAAGCTTTTGGATTTAGTCTTGATTTAACATAGTATTAGAGTCGACACTTCTGAGTCGTAGCGACATTATTCAAAGTTGAACACTCATTATGTTTGCAGTTTGCTTGGCCATATGAATCAACATCGAGAAAACCAAAAGCTACTGTAATAGCCCAAGCCTACTGCTAGCAGATATTGTCCTCTTTAGGCTTTCTCTTTTAGACTTCCCCTCAAGGTTTTCAAAACGCATCTGCTAGAGAGAGGTTTCCACACTCTTATAAAGAATGATTTGTTCCCCTCTCCAACGGTTGTAGGATCCCACAATCCACTCCCCATTCGGGGCCAACGTCCTCGCTGGCACACCGCCCGGTGTCTAGCTCAAATCTCACATCGGTTGGAGAGGGGTGCAAAACATTTTCTATAAGGGTGTGGAAACCTCTCCCTAGCAGACACGTTTTAAAATCCTTGAGGGGAAGCCCGAAAGGGAAAGTTCAAAGAGGACGTGGTGGGCTTGGGCTGTTACATTCATACTCAAGATGACGGAGTGTGGTTATTTAGTCATTTGTACATGTTTATACAAGACTTTCCCCAAATCTTTGGTTGCCAGATTCAAAACCAGCCAAATTGTTTGTTTAGAACAAGTAACATTCTTGAGATTCGTTCACAGAATGAGTTCTGGTTTCTTTCAATGTTAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATCTCTGTTTCCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAGCTTTGCGTAAGGATCACTTCTTTCTTGTTAAGTGTAGCTGAGTTGAAAGCTTTAAGAAAATCCTATTCCTTCCACTTCCCAATCATCTTTATTTGTCGTTCTTTATTTCATAGTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCTTCACTAGGGGCTTGCATTGAAGTTAAAGTATCTGATGAAGAGCTGGCGATATTATTGTCCAATCTTTAGTGACTTTATCAAAGCCAAAGCTCTCAGTACTCAAAGTTTGAGAGGTAATCAAACACATTGTTGTATTTTACCAACTTTTTCCTTCTGTACTTGAACAGCTTTTGTATCCTGTTGAGCACATAATGAAACTTGCATAATTATAACCATCACAACGTCCTAGGTTTCCTTGGTGAGCTGGTAATTCTCACTTGTTTGTCACGCACTGTGAGATCCTACATCAGTTGGAGAGGCGAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTCTCTAATGGACACGTTTTAAAATATGAGGGGAAGTCCGGAAGGGAGAGCCCAAAGAGGACAATATTTGTTAGCGGTAGGCTTCGGCTGTTACAAATGGTATCAGAGTCAGACACCGGGCAGTGTGTCAGCGAGGATGGTGAGCCCCAATGGGGTGGATTGTGACATCCCACGTCAGTTGGAGAGGGGAAACAAAGTATTCCTTTTAAGGGTATGTAAACCTCTCGCTAGTAGATGCGTTTTAAAACCTTGAGGGGAAGCCCAAAGAGGACAATATTTGCTAGTGGGGGGATTGAGCTGTTACAAATGGTATTAGAGCCGGACACTGGGCAGTATGTCAACGAGGACACCAAGTCTCAAGGGGGTGGATTGTGGGATCTCAAATCAGTTGGAGAAGGGAACGAAAGATTCCTTGGGTGTGGAAACTTTCCCCTAGTAGACGCATTTTAAAACCTTGAGGGAAAGTCCAAAGATCACAATATCTGCTAGCAGTGAGCTTGAACGGTTACAAACTACCATGTTCTATATTTATTTCATTAAATTAGAACAAGCCAACCCTGCAATATCCCCTCTTCCTCGTTCCTTTTTCTTCAGGTTCCAGAATATTTGAGGGGAAACCAAAGGTCTATATCTCATACTTTCCAGATTGAGTTCATATAAAACGTTGCAAGTTTCTGTTAAGGTTAATCATTGATCTACATGAATATGATAGTTATTAATGATTGTGTTTCATTTCTGTAAGATATATATCATTGATTCATATCTATGAACATGCTTGCAAATTATAACCATAGTCTAATACATGCTTGCATATTAAGTTTTCATGATAGATGGATATTGACCCATGGATGTCAATTATTATTCTAGAACTCTTTGGACGACACTTTTTCTCTTGCAAACAGATTTTGTTCAAGGAAAGTTTTGGCCATTACCATAAGTCAAGTCTGCCGTTACTATTAACATCCAGTTCAAATATATTATTTATCTGTATAGTTTAAGAGTCGGGATTTGTGACCGGATTCCTTGTATGTTATATTTGTTTCGGGGTATTGGATATTTGAACCAAAAGTACTTGCCTGAAATAGTTGAGCTGTACTTAAGTTGACAAAATTGCAAGAGTTCGAAAGTTTGA

mRNA sequence

TGAACGTGGGGGAGAAAATTTGTCAAAATGTTTGAAGTATTTAGCTTTTGCGCCTAAAAGTTATTAGAGGACCGACATATTTGTATAATTACATCTAATCGATATTAATTTTGTGGTGGATTCATTCAATAATCTGACCCAAAAAAGAAAAATAAAAATTTGTTGAATAATTTGGGGGAGAAATGGATTTAGATTATCCAATATTTCTATAAACAAAATTTAAAATCACACCCAGAAAAATTTGCTGATTTTTTACGAGGAATTTCCTCCAAAATGAGTGCGAGTACCCTCGCCGCCGAAGCAGTGTGGAAGCAGATCGAGTCGACTCGATCAGTGACCGACGATCAGCTTTCAATATTGCATTTCTTGTTTGGCAAGAACTTCGAGCGAGCTACTCGGATTGTGGATCAAAGTGGAGTGAAGAGAATTTCAGGCGATCCAAGCGGACGGTCCATCTTTCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATCTCTGTTTCCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAGCTTTGCTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCTTCACTAGGGGCTTGCATTGAAGTTAAAGTATCTGATGAAGAGCTGGCGATATTATTGTCCAATCTTTAGTGACTTTATCAAAGCCAAAGCTCTCAGTACTCAAAGTTTGAGAGGTAATCAAACACATTGTTGTATTTTACCAACTTTTTCCTTCTGTACTTGAACAGCTTTTGTATCCTGTTGAGCACATAATGAAACTTGCATAATTATAACCATCACAACGTCCTAGGTTTCCTTGGTGAGCTGGTAATTCTCACTTGTTTGTCACGCACTGTGAGATCCTACATCAGTTGGAGAGGCGAACGAAACATTCTTTATAAGAGTGTGGAAACCTCTCTCTAATGGACACGTTTTAAAATATGAGGGGAAGTCCGGAAGGGAGAGCCCAAAGAGGACAATATTTGTTAGCGGTAGGCTTCGGCTGTTACAAATGGTATCAGAGTCAGACACCGGGCAGTGTGTCAGCGAGGATGGTGAGCCCCAATGGGGTGGATTGTGACATCCCACGTCAGTTGGAGAGGGGAAACAAAGTATTCCTTTTAAGGGTATGTAAACCTCTCGCTAGTAGATGCGTTTTAAAACCTTGAGGGGAAGCCCAAAGAGGACAATATTTGCTAGTGGGGGGATTGAGCTGTTACAAATGGTATTAGAGCCGGACACTGGGCAGTATGTCAACGAGGACACCAAGTCTCAAGGGGGTGGATTGTGGGATCTCAAATCAGTTGGAGAAGGGAACGAAAGATTCCTTGGGTGTGGAAACTTTCCCCTAGTAGACGCATTTTAAAACCTTGAGGGAAAGTCCAAAGATCACAATATCTGCTAGCAGTGAGCTTGAACGGTTACAAACTACCATGTTCTATATTTATTTCATTAAATTAGAACAAGCCAACCCTGCAATATCCCCTCTTCCTCGTTCCTTTTTCTTCAGGTTCCAGAATATTTGAGGGGAAACCAAAGGTCTATATCTCATACTTTCCAGATTGAGTTCATATAAAACGTTGCAAGTTTCTGTTAAGGTTAATCATTGATCTACATGAATATGATAGTTATTAATGATTGTGTTTCATTTCTGTAAGATATATATCATTGATTCATATCTATGAACATGCTTGCAAATTATAACCATAGTCTAATACATGCTTGCATATTAAGTTTTCATGATAGATGGATATTGACCCATGGATGTCAATTATTATTCTAGAACTCTTTGGACGACACTTTTTCTCTTGCAAACAGATTTTGTTCAAGGAAAGTTTTGGCCATTACCATAAGTCAAGTCTGCCGTTACTATTAACATCCAGTTCAAATATATTATTTATCTGTATAGTTTAAGAGTCGGGATTTGTGACCGGATTCCTTGTATGTTATATTTGTTTCGGGGTATTGGATATTTGAACCAAAAGTACTTGCCTGAAATAGTTGAGCTGTACTTAAGTTGACAAAATTGCAAGAGTTCGAAAGTTTGA

Coding sequence (CDS)

ATGAGTGCGAGTACCCTCGCCGCCGAAGCAGTGTGGAAGCAGATCGAGTCGACTCGATCAGTGACCGACGATCAGCTTTCAATATTGCATTTCTTGTTTGGCAAGAACTTCGAGCGAGCTACTCGGATTGTGGATCAAAGTGGAGTGAAGAGAATTTCAGGCGATCCAAGCGGACGGTCCATCTTTCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATCTCTGTTTCCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAGCTTTGCTGCAAGCATCAGTTAGCTGCAAGGCTTGCTGCTTCACTAGGGGCTTGCATTGAAGTTAAAGTATCTGATGAAGAGCTGGCGATATTATTGTCCAATCTTTAG

Protein sequence

MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRSIFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKVSDEELAILLSNL
Homology
[Close]
BLAST of Cp4.1LG01g02610 vs. Swiss-Prot
Match: ZSWM7_DANRE (Zinc finger SWIM domain-containing protein 7 OS=Danio rerio GN=zswim7 PE=2 SV=2)

HSP 1 Score: 82.4 bits (202), Expect = 4.0e-15
Identity = 51/134 (38.06%), Postives = 76/134 (56.72%), Query Frame = 1 

Query: 2   SASTLAAEAVWKQIESTRS----VTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPS 61
           S+    AE + K ++ T S    + DD L  L F+FG    +A  +VDQ  V  +S  PS
Sbjct: 3   SSLVSVAEQLLKDLQRTYSEIKQIPDDLLIALRFVFGPCALQALDLVDQHSVTCVSS-PS 62

Query: 62  GRSIFQVVGESRRKEEYLCFPE-NFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACI 121
           GR  FQV+G S R   Y CF   ++C C +F + ++ R E L CKH LA  L+ ++G C 
Sbjct: 63  GRKAFQVLGGSGRL--YTCFTSCHYCPCPAFSFTVLRRNESLMCKHLLAVILSQAMGLCQ 122

Query: 122 EVKVSDEELAILLS 131
           + +VSD+++  +LS
Sbjct: 123 QEQVSDQQMTHILS 133

[Close]
BLAST of Cp4.1LG01g02610 vs. TrEMBL
Match: A0A0A0KWG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001010 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.1e-62
Identity = 123/132 (93.18%), Postives = 126/132 (95.45%), Query Frame = 1 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           MSAS + AEAVWKQIESTR VTDDQLSILHFLFGKNFERATRIVDQ GVK+ISG PS RS
Sbjct: 1   MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSTRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAAS+GACIEVKV
Sbjct: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASVGACIEVKV 120

Query: 121 SDEELAILLSNL 133
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]
BLAST of Cp4.1LG01g02610 vs. TrEMBL
Match: A0A067F2X6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035575mg PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.1e-58
Identity = 111/132 (84.09%), Postives = 125/132 (94.70%), Query Frame = 1 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           MSAS+L AE+VWK IESTRSVT+DQLSILHFLFGKN ERATRIVDQ GV+RISG+PSGRS
Sbjct: 1   MSASSLVAESVWKSIESTRSVTEDQLSILHFLFGKNIERATRIVDQRGVRRISGEPSGRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IF+VVGESRRKEEYLCF EN+CACYSFFYDIVN+GEQLCCKHQLAARLA++LGAC+EV V
Sbjct: 61  IFKVVGESRRKEEYLCFAENYCACYSFFYDIVNKGEQLCCKHQLAARLASALGACVEVNV 120

Query: 121 SDEELAILLSNL 133
           SDE+LA+LL+ L
Sbjct: 121 SDEQLALLLAKL 132

[Close]
BLAST of Cp4.1LG01g02610 vs. TrEMBL
Match: V4S6R4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029563mg PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.1e-58
Identity = 111/132 (84.09%), Postives = 125/132 (94.70%), Query Frame = 1 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           MSAS+L AE+VWK IESTRSVT+DQLSILHFLFGKN ERATRIVDQ GV+RISG+PSGRS
Sbjct: 1   MSASSLVAESVWKSIESTRSVTEDQLSILHFLFGKNIERATRIVDQRGVRRISGEPSGRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IF+VVGESRRKEEYLCF EN+CACYSFFYDIVN+GEQLCCKHQLAARLA++LGAC+EV V
Sbjct: 61  IFKVVGESRRKEEYLCFAENYCACYSFFYDIVNKGEQLCCKHQLAARLASALGACVEVNV 120

Query: 121 SDEELAILLSNL 133
           SDE+LA+LL+ L
Sbjct: 121 SDEQLALLLAKL 132

[Close]
BLAST of Cp4.1LG01g02610 vs. TrEMBL
Match: A0A061E048_THECC (Zinc finger SWIM domain-containing protein 7 isoform 1 OS=Theobroma cacao GN=TCM_007185 PE=4 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 3.5e-58
Identity = 111/132 (84.09%), Postives = 123/132 (93.18%), Query Frame = 1 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           M+AS L AE+VWK IEST SV+++QLSILHFLFGKNFERATRIVDQ GVK+ISG+PSGRS
Sbjct: 33  MTASHLVAESVWKTIESTHSVSEEQLSILHFLFGKNFERATRIVDQRGVKKISGEPSGRS 92

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEY CFPE++CACYSFFYDI NRGEQLCCKHQLAARLA SLGAC+EVKV
Sbjct: 93  IFQVVGESRRKEEYFCFPEHYCACYSFFYDIANRGEQLCCKHQLAARLAGSLGACVEVKV 152

Query: 121 SDEELAILLSNL 133
           SDE+LA+LLS L
Sbjct: 153 SDEQLALLLSEL 164

[Close]
BLAST of Cp4.1LG01g02610 vs. TrEMBL
Match: A0A068TMU5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014526001 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 7.8e-58
Identity = 110/132 (83.33%), Postives = 122/132 (92.42%), Query Frame = 1 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           M+ S+L AEA WK+IES  SVTDDQLS LHFLFGKN E+ATRIVDQ GVKRISG+PSGRS
Sbjct: 1   MNTSSLVAEAAWKEIESRGSVTDDQLSTLHFLFGKNLEKATRIVDQRGVKRISGEPSGRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQV+GESRRKEEYLCFPE++CACYSFFYD+VNRGEQLCCKHQLAARLAASLGACI+VK+
Sbjct: 61  IFQVLGESRRKEEYLCFPEHYCACYSFFYDVVNRGEQLCCKHQLAARLAASLGACIDVKI 120

Query: 121 SDEELAILLSNL 133
            DEELA+LLS L
Sbjct: 121 PDEELALLLSKL 132

[Close]
BLAST of Cp4.1LG01g02610 vs. TAIR10
Match: AT4G33925.1 (AT4G33925.1 unknown protein)

HSP 1 Score: 191.4 bits (485), Expect = 3.5e-49
Identity = 89/132 (67.42%), Postives = 112/132 (84.85%), Query Frame = 1 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           M+ + L A+AVW  IEST SVT++QLSIL  LFGKN E+ATRI+D+ GVK+ISG PSGRS
Sbjct: 1   MNVTLLVADAVWSNIESTGSVTEEQLSILQLLFGKNLEKATRIIDKRGVKKISGLPSGRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGES+++EEYLCFP ++C CYSFFYD+V+RGE  CCKHQLAARLA+SLG   E++V
Sbjct: 61  IFQVVGESQKREEYLCFPGDYCGCYSFFYDVVSRGEHQCCKHQLAARLASSLGTYNEIEV 120

Query: 121 SDEELAILLSNL 133
           SD+ LA++LS +
Sbjct: 121 SDDHLALMLSKI 132

[Close]
BLAST of Cp4.1LG01g02610 vs. NCBI nr
Match: gi|449469114|ref|XP_004152266.1| (PREDICTED: zinc finger SWIM domain-containing protein 7 isoform X1 [Cucumis sativus])

HSP 1 Score: 247.3 bits (630), Expect = 1.5e-62
Identity = 123/132 (93.18%), Postives = 126/132 (95.45%), Query Frame = 1 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           MSAS + AEAVWKQIESTR VTDDQLSILHFLFGKNFERATRIVDQ GVK+ISG PS RS
Sbjct: 1   MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSTRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAAS+GACIEVKV
Sbjct: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASVGACIEVKV 120

Query: 121 SDEELAILLSNL 133
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]
BLAST of Cp4.1LG01g02610 vs. NCBI nr
Match: gi|659108764|ref|XP_008454376.1| (PREDICTED: zinc finger SWIM domain-containing protein 7 [Cucumis melo])

HSP 1 Score: 244.2 bits (622), Expect = 1.3e-61
Identity = 121/132 (91.67%), Postives = 125/132 (94.70%), Query Frame = 1 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           MSAS + AEAVWK+IESTR VTDDQLSILHFLFGKNFERATRIVDQ GVK+ISG PS RS
Sbjct: 1   MSASIVVAEAVWKRIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSRRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEY CFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAAS+GACIEVKV
Sbjct: 61  IFQVVGESRRKEEYFCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASVGACIEVKV 120

Query: 121 SDEELAILLSNL 133
           SDEELAILLSNL
Sbjct: 121 SDEELAILLSNL 132

[Close]
BLAST of Cp4.1LG01g02610 vs. NCBI nr
Match: gi|1009150346|ref|XP_015892970.1| (PREDICTED: zinc finger SWIM domain-containing protein 7 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 238.8 bits (608), Expect = 5.4e-60
Identity = 116/132 (87.88%), Postives = 124/132 (93.94%), Query Frame = 1 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           MSAS+L AEAVWK+I+ST SVTDDQLSILHFLFGKNFERAT+IVDQ GVKR+SG PSGRS
Sbjct: 1   MSASSLVAEAVWKEIQSTGSVTDDQLSILHFLFGKNFERATKIVDQRGVKRVSGHPSGRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           +FQVVGESRRKEEYLCF E FCACYSFFYDIVNRGEQLCCKHQLAARLAASLG+CIEVKV
Sbjct: 61  VFQVVGESRRKEEYLCFAEEFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGSCIEVKV 120

Query: 121 SDEELAILLSNL 133
           SDE+LA LL NL
Sbjct: 121 SDEQLAFLLCNL 132

[Close]
BLAST of Cp4.1LG01g02610 vs. NCBI nr
Match: gi|645261693|ref|XP_008236417.1| (PREDICTED: zinc finger SWIM domain-containing protein 7 [Prunus mume])

HSP 1 Score: 236.1 bits (601), Expect = 3.5e-59
Identity = 115/132 (87.12%), Postives = 123/132 (93.18%), Query Frame = 1 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           MSAS+L AEAVWK IEST SVTDDQLSILHFLFGKN ERATRIVDQ GVKR+ G+PSGRS
Sbjct: 1   MSASSLVAEAVWKAIESTGSVTDDQLSILHFLFGKNLERATRIVDQRGVKRVLGEPSGRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IFQVVGESRRKEEY CF E++CACYSFFYDIVNRGEQLCCKHQLAARLAASLGAC+EVKV
Sbjct: 61  IFQVVGESRRKEEYFCFAEHYCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACVEVKV 120

Query: 121 SDEELAILLSNL 133
           SDE+LA+LLS L
Sbjct: 121 SDEQLAVLLSKL 132

[Close]
BLAST of Cp4.1LG01g02610 vs. NCBI nr
Match: gi|567860416|ref|XP_006422862.1| (hypothetical protein CICLE_v10029563mg [Citrus clementina])

HSP 1 Score: 233.0 bits (593), Expect = 2.9e-58
Identity = 111/132 (84.09%), Postives = 125/132 (94.70%), Query Frame = 1 

Query: 1   MSASTLAAEAVWKQIESTRSVTDDQLSILHFLFGKNFERATRIVDQSGVKRISGDPSGRS 60
           MSAS+L AE+VWK IESTRSVT+DQLSILHFLFGKN ERATRIVDQ GV+RISG+PSGRS
Sbjct: 1   MSASSLVAESVWKSIESTRSVTEDQLSILHFLFGKNIERATRIVDQRGVRRISGEPSGRS 60

Query: 61  IFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASLGACIEVKV 120
           IF+VVGESRRKEEYLCF EN+CACYSFFYDIVN+GEQLCCKHQLAARLA++LGAC+EV V
Sbjct: 61  IFKVVGESRRKEEYLCFAENYCACYSFFYDIVNKGEQLCCKHQLAARLASALGACVEVNV 120

Query: 121 SDEELAILLSNL 133
           SDE+LA+LL+ L
Sbjct: 121 SDEQLALLLAKL 132

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g02610 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZSWM7_DANRE4.0e-1538.06Zinc finger SWIM domain-containing protein 7 OS=Danio rerio GN=zswim7 PE=2 SV=2[more]
BLAST of Cp4.1LG01g02610 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KWG5_CUCSA1.1e-6293.18Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001010 PE=4 SV=1[more]
A0A067F2X6_CITSI2.1e-5884.09Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035575mg PE=4 SV=1[more]
V4S6R4_9ROSI2.1e-5884.09Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029563mg PE=4 SV=1[more]
A0A061E048_THECC3.5e-5884.09Zinc finger SWIM domain-containing protein 7 isoform 1 OS=Theobroma cacao GN=TCM... [more]
A0A068TMU5_COFCA7.8e-5883.33Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014526001 PE=4 SV=1[more]
BLAST of Cp4.1LG01g02610 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G33925.13.5e-4967.42 unknown protein[more]
BLAST of Cp4.1LG01g02610 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449469114|ref|XP_004152266.1|1.5e-6293.18PREDICTED: zinc finger SWIM domain-containing protein 7 isoform X1 [Cucumis sati... [more]
gi|659108764|ref|XP_008454376.1|1.3e-6191.67PREDICTED: zinc finger SWIM domain-containing protein 7 [Cucumis melo][more]
gi|1009150346|ref|XP_015892970.1|5.4e-6087.88PREDICTED: zinc finger SWIM domain-containing protein 7 isoform X1 [Ziziphus juj... [more]
gi|645261693|ref|XP_008236417.1|3.5e-5987.12PREDICTED: zinc finger SWIM domain-containing protein 7 [Prunus mume][more]
gi|567860416|ref|XP_006422862.1|2.9e-5884.09hypothetical protein CICLE_v10029563mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR007527Znf_SWIM
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042742 defense response to bacterium
biological_process GO:0000724 double-strand break repair via homologous recombination
biological_process GO:0008150 biological_process
cellular_component GO:0005634 nucleus
cellular_component GO:0005575 cellular_component
molecular_function GO:0044212 transcription regulatory region DNA binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g02610.1Cp4.1LG01g02610.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007527Zinc finger, SWIM-typePROFILEPS50966ZF_SWIMcoord: 62..111
score:
NoneNo IPR availablePANTHERPTHR28498FAMILY NOT NAMEDcoord: 8..129
score: 1.6

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g02610Cucsa.097380Cucumber (Gy14) v1cgycpeB0192
Cp4.1LG01g02610CmaCh04G004610Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g02610CmoCh04G004930Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g02610Cla006408Watermelon (97103) v1cpewmB382
Cp4.1LG01g02610Csa4G001010Cucumber (Chinese Long) v2cpecuB402
Cp4.1LG01g02610ClCG10G010580Watermelon (Charleston Gray)cpewcgB345
Cp4.1LG01g02610CSPI04G00550Wild cucumber (PI 183967)cpecpiB399
Cp4.1LG01g02610CsaV3_4G000500Cucumber (Chinese Long) v3cpecucB0499
Cp4.1LG01g02610Bhi11G000967Wax gourdcpewgoB0477
Cp4.1LG01g02610CsGy4G000480Cucumber (Gy14) v2cgybcpeB504
Cp4.1LG01g02610Carg08132Silver-seed gourdcarcpeB0527
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g02610Cucurbita moschata (Rifu)cmocpeB114
Cp4.1LG01g02610Cucurbita moschata (Rifu)cmocpeB311
Cp4.1LG01g02610Cucurbita moschata (Rifu)cmocpeB815
Cp4.1LG01g02610Wild cucumber (PI 183967)cpecpiB470
Cp4.1LG01g02610Cucumber (Chinese Long) v2cpecuB468
Cp4.1LG01g02610Cucumber (Chinese Long) v2cpecuB470
Cp4.1LG01g02610Bottle gourd (USVL1VR-Ls)cpelsiB325
Cp4.1LG01g02610Bottle gourd (USVL1VR-Ls)cpelsiB340
Cp4.1LG01g02610Bottle gourd (USVL1VR-Ls)cpelsiB348
Cp4.1LG01g02610Watermelon (Charleston Gray)cpewcgB378
Cp4.1LG01g02610Watermelon (97103) v1cpewmB453
Cp4.1LG01g02610Melon (DHL92) v3.5.1cpemeB394
Cp4.1LG01g02610Melon (DHL92) v3.5.1cpemeB422
Cp4.1LG01g02610Melon (DHL92) v3.5.1cpemeB435
Cp4.1LG01g02610Cucumber (Gy14) v2cgybcpeB213
Cp4.1LG01g02610Cucumber (Gy14) v2cgybcpeB515
Cp4.1LG01g02610Cucumber (Gy14) v2cgybcpeB805
Cp4.1LG01g02610Melon (DHL92) v3.6.1cpemedB457
Cp4.1LG01g02610Melon (DHL92) v3.6.1cpemedB472
Cp4.1LG01g02610Melon (DHL92) v3.6.1cpemedB492
Cp4.1LG01g02610Melon (DHL92) v3.6.1cpemedB494
Cp4.1LG01g02610Melon (DHL92) v3.6.1cpemedB507
Cp4.1LG01g02610Silver-seed gourdcarcpeB0408
Cp4.1LG01g02610Cucumber (Chinese Long) v3cpecucB0481
Cp4.1LG01g02610Cucumber (Chinese Long) v3cpecucB0511
Cp4.1LG01g02610Cucumber (Chinese Long) v3cpecucB0576
Cp4.1LG01g02610Cucumber (Chinese Long) v3cpecucB0582
Cp4.1LG01g02610Wax gourdcpewgoB0539
Cp4.1LG01g02610Wax gourdcpewgoB0547
Cp4.1LG01g02610Wax gourdcpewgoB0580
Cp4.1LG01g02610Cucurbita pepo (Zucchini)cpecpeB234
Cp4.1LG01g02610Cucurbita pepo (Zucchini)cpecpeB400
Cp4.1LG01g02610Cucumber (Gy14) v1cgycpeB0218
Cp4.1LG01g02610Cucumber (Gy14) v1cgycpeB0599
Cp4.1LG01g02610Cucurbita maxima (Rimu)cmacpeB136
Cp4.1LG01g02610Cucurbita maxima (Rimu)cmacpeB351