Csa4G001010 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAATTTAAGAAATGGGTATGTGAAAAAGGAAAAAAAATTGTTGTTAATTGGGAGAAAGAAGAAGAATTTGGGTGGGAATGAGTGCGAGTATTGTGGTAGCTGAAGCTGTGTGGAAGCAGATCGAGTCCACTCGATTAGGTTCTTTCTTTCTTTCTTTCTACTTAGCTTGTTTTTTTCTTTTCGAATCTTTACTGAAAGAAGTTGGAACCGATTTTCGTAGTGACTGATGATCAGCTTTCAATGTGAGTATTCTCGGTTCTTTCCATTTCCACTACTTTTTCTTCATCTTCTTTGTGTATGTAATGTTTATGCAACCTTGATGTTGCTCCAGCTTGCATTTCTTGTTTGGCAAGAACTTCGAGCGAGCTACTCGAATTGTTGATCAAAGAGGGGTCAAGAAAATTTCAGGCCACCCAAGCACACGATCTATCTTTCAGGTCAATTTCTATTATTGTTATTGTTATTTTTTTTTTTTTTTTTTTTTTTTAGTTGAAATATTCAAATTGATTTTAGGTTTGGCAAAATGAAGATTCTGTTTGGGGGTTTGCTGAGAGTATCCTAAAATAGAACGTACTTCTGTTCTGTTTAAAGTCTCATGATATGGAATGGCACGGAGAATTAAGCCATGTTTCTTCTCCATCTCCCTAGATATATAGGAAGATTTACCCCTAGGGTTAAGAATCTTTCCTATACATATTAAAAATAGCGCGAAACTAAATGTTAGGAGGAGGTGGAGTTCGTTGGTTTGATTCCATGTGATATGTACCACCAGACCTAGGAAGTTAATCTTAAGAATATGAATATAAGATTAAATACTGTAGTCTATTTGCTCGAGCTTTTGGAGTTAGTCTTGGGTTAATATGGTATAAGAGTTGCACTTGTCAATATGAAATTTTTTCTCTCTGTTTCATATTTGAAAAAGAAAAAAAAAAAAGTCATTTATTTCCGCTCATAACAAGATAGATTGCTCCAAGTGGAATCCACATCATGACTCAAGTATGGTTCATCACACAAATCAACCTTAGCCAAACCAAGAGCTAATATGTTCTCTTTTAACATAAATGGATCAGTTTTGAGAAAACCTGGAGGGCTGCTCTAGCCGCCATTAGTTGAACTTCTAGTTAATAAGAACCAATCTAAATATTACAGGACTTAAAAATAGGATGAGTTCAAGTCATGATGACCATTTAACTAAGATTTGGTATCTTGTGAGTTTTCTTAGCAACCAAATGTTGATGGATCAAACAATTGTCCTATGAAACTAATTGAGATGTGCAAGTTAATTTGGATAATGACAAATATTAACAAAAAGAAAAAAGAAATTCGTTGATACACGTACTTTACTTCCTCTTGGGCGAAAGAAATCCTTTGTTCTACTTTGAATTTCTATAATATATTTTCCTCTCTAGTTAATATCGATAGTCACTTGTTCGGTTTTTTTTGCTAATTTCCAAGCTCGCAATCAAGGGAAGCATTGGGAATGAGTACAAAAGATTATGGTATATTTTTTCCTTCCTACTTGTTCTTAACAAAACTTTCTCGAAATAAGAAGTTTTTTGTTGCTGGACTGAAGACAATGGAAATCGTTAATTTAGAATATGTAACAGCTTAAGCACTTTTAAACTCGAGGATAGCTTGGAAGATGAGTTCAGTTTTCTTACAATGTTAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATCTCTGTTTCCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAACTTTGTGTAAGCACCAGTTCTTATTAATATGTAATGAAAATGAGTTGAAGCTTGATGAGAACCTTAATCCCCTTCCACTTCTCAACCGTCTTTATTTCCTGCTTCTTTCTTTTATTTCTTTGGTAGTGCAAGCATCAATTAGCTGCAAGGCTTGCTGCTTCAGTGGGGGCTTGCATTGAAGTTAAAGTATCTGATGAAGAGCTGGCAATATTGTTGTCCAATCTCTAAAAGCCTGTAATGATTTTATCTAAGCCAACACTCTCAGTGCTCGAAGTTTCAGAGGTAATCAAACCACATAATTGTATGAACAGCAACCTTTTCCGGTTGTACTCAAGTAGCTTTTATACTCGATATAGCTATTGAGCTCATGTAAAACTTGCACTATGACCATCACAACATACTAGGTTTCACAGGTGAGCTGGTAATTCTAATTTGTTTGTGACTCACCAGTTACTAATATGTTCCGTTTTACGAGTAAATGAAGACAAACCAACACAGCAGTATTTCGAAATCAAACACCTATCTTCCTCTCCCATCCTACTATTT ATGAGTGCGAGTATTGTGGTAGCTGAAGCTGTGTGGAAGCAGATCGAGTCCACTCGATTAGTGACTGATGATCAGCTTTCAATCTTGCATTTCTTGTTTGGCAAGAACTTCGAGCGAGCTACTCGAATTGTTGATCAAAGAGGGGTCAAGAAAATTTCAGGCCACCCAAGCACACGATCTATCTTTCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATCTCTGTTTCCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAACTTTGTTGCAAGCATCAATTAGCTGCAAGGCTTGCTGCTTCAGTGGGGGCTTGCATTGAAGTTAAAGTATCTGATGAAGAGCTGGCAATATTGTTGTCCAATCTCTAA ATGAGTGCGAGTATTGTGGTAGCTGAAGCTGTGTGGAAGCAGATCGAGTCCACTCGATTAGTGACTGATGATCAGCTTTCAATCTTGCATTTCTTGTTTGGCAAGAACTTCGAGCGAGCTACTCGAATTGTTGATCAAAGAGGGGTCAAGAAAATTTCAGGCCACCCAAGCACACGATCTATCTTTCAGGTTGTGGGAGAATCTCGAAGGAAAGAGGAGTATCTCTGTTTCCCAGAAAACTTTTGTGCCTGTTATTCCTTCTTCTATGACATTGTGAACAGAGGAGAACAACTTTGTTGCAAGCATCAATTAGCTGCAAGGCTTGCTGCTTCAGTGGGGGCTTGCATTGAAGTTAAAGTATCTGATGAAGAGCTGGCAATATTGTTGTCCAATCTCTAA MSASIVVAEAVWKQIESTRLVTDDQLSILHFLFGKNFERATRIVDQRGVKKISGHPSTRSIFQVVGESRRKEEYLCFPENFCACYSFFYDIVNRGEQLCCKHQLAARLAASVGACIEVKVSDEELAILLSNL*
BLAST of Csa4G001010 vs. Swiss-Prot
Match: ZSWM7_DANRE (Zinc finger SWIM domain-containing protein 7 OS=Danio rerio GN=zswim7 PE=2 SV=2) HSP 1 Score: 81.3 bits (199), Expect = 9.0e-15 Identity = 50/134 (37.31%), Postives = 75/134 (55.97%), Query Frame = 1
BLAST of Csa4G001010 vs. TrEMBL
Match: A0A0A0KWG5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G001010 PE=4 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 4.9e-68 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1
BLAST of Csa4G001010 vs. TrEMBL
Match: A0A061E048_THECC (Zinc finger SWIM domain-containing protein 7 isoform 1 OS=Theobroma cacao GN=TCM_007185 PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 5.1e-57 Identity = 110/132 (83.33%), Postives = 122/132 (92.42%), Query Frame = 1
BLAST of Csa4G001010 vs. TrEMBL
Match: A0A067F2X6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035575mg PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 2.5e-56 Identity = 108/132 (81.82%), Postives = 123/132 (93.18%), Query Frame = 1
BLAST of Csa4G001010 vs. TrEMBL
Match: V4S6R4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10029563mg PE=4 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 2.5e-56 Identity = 108/132 (81.82%), Postives = 123/132 (93.18%), Query Frame = 1
BLAST of Csa4G001010 vs. TrEMBL
Match: A0A068TMU5_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00014526001 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 9.6e-56 Identity = 107/132 (81.06%), Postives = 120/132 (90.91%), Query Frame = 1
BLAST of Csa4G001010 vs. TAIR10
Match: AT4G33925.1 (AT4G33925.1 unknown protein) HSP 1 Score: 190.3 bits (482), Expect = 7.8e-49 Identity = 88/132 (66.67%), Postives = 111/132 (84.09%), Query Frame = 1
BLAST of Csa4G001010 vs. NCBI nr
Match: gi|449469114|ref|XP_004152266.1| (PREDICTED: zinc finger SWIM domain-containing protein 7 isoform X1 [Cucumis sativus]) HSP 1 Score: 265.0 bits (676), Expect = 7.0e-68 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1
BLAST of Csa4G001010 vs. NCBI nr
Match: gi|659108764|ref|XP_008454376.1| (PREDICTED: zinc finger SWIM domain-containing protein 7 [Cucumis melo]) HSP 1 Score: 259.6 bits (662), Expect = 3.0e-66 Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 1
BLAST of Csa4G001010 vs. NCBI nr
Match: gi|1009150346|ref|XP_015892970.1| (PREDICTED: zinc finger SWIM domain-containing protein 7 isoform X1 [Ziziphus jujuba]) HSP 1 Score: 236.1 bits (601), Expect = 3.5e-59 Identity = 114/132 (86.36%), Postives = 124/132 (93.94%), Query Frame = 1
BLAST of Csa4G001010 vs. NCBI nr
Match: gi|645261693|ref|XP_008236417.1| (PREDICTED: zinc finger SWIM domain-containing protein 7 [Prunus mume]) HSP 1 Score: 229.2 bits (583), Expect = 4.3e-57 Identity = 112/132 (84.85%), Postives = 121/132 (91.67%), Query Frame = 1
BLAST of Csa4G001010 vs. NCBI nr
Match: gi|1009150350|ref|XP_015892972.1| (PREDICTED: zinc finger SWIM domain-containing protein 7 isoform X2 [Ziziphus jujuba]) HSP 1 Score: 228.8 bits (582), Expect = 5.6e-57 Identity = 112/132 (84.85%), Postives = 123/132 (93.18%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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